NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Gene3D G3DSA:3.30.1360.120 2 51 2.5E-47 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Gene3D G3DSA:3.30.1360.120 141 237 2.5E-47 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 361 1.1E-120 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 SUPERFAMILY SSF101790 273 361 2.62E-24 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 PIRSF PIRSF006487 1 361 5.8E-96 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Gene3D G3DSA:2.40.30.110 280 357 1.1E-26 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Gene3D G3DSA:3.30.70.1400 52 140 1.1E-28 T 23-04-2016 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 265 357 9.8E-24 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 260 5.3E-89 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 PANTHER PTHR13847:SF5 4 361 3.4E-63 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 SUPERFAMILY SSF103025 1 281 4.87E-91 T 23-04-2016 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 361 41.41 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NIAKO_RS31625 dd14ae037ccbb798c70de20f9ced3322 361 PANTHER PTHR13847 4 361 3.4E-63 T 23-04-2016 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 Pfam PF02881 SRP54-type protein, helical bundle domain 29 92 7.1E-13 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 40 317 59.369 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 Pfam PF00448 SRP54-type protein, GTPase domain 116 316 3.1E-76 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 290 303 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 Gene3D G3DSA:3.40.50.300 111 317 2.3E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 PANTHER PTHR11564:SF16 10 317 6.0E-124 T 23-04-2016 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 41 316 7.3E-108 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 SUPERFAMILY SSF47364 14 90 5.36E-17 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 SMART SM00382 115 316 4.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 Gene3D G3DSA:1.20.120.140 18 98 8.4E-25 T 23-04-2016 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 SMART SM00963 16 97 1.1E-16 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 SMART SM00962 116 317 2.3E-114 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 SUPERFAMILY SSF52540 112 317 2.82E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12710 8e438d86d66b553b96fc68ea217fddd3 320 PANTHER PTHR11564 10 317 6.0E-124 T 23-04-2016 NIAKO_RS03050 a22c8d1659242c0bf41df55222e6fda5 342 SUPERFAMILY SSF51445 91 324 3.17E-23 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03050 a22c8d1659242c0bf41df55222e6fda5 342 Gene3D G3DSA:3.20.20.80 58 322 1.2E-28 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 TIGRFAM TIGR01793 cit_synth_euk: citrate (Si)-synthase, eukaryotic 4 426 2.3E-194 T 23-04-2016 IPR010109 Citrate synthase, eukaryotic-type GO:0004108|GO:0006101 UniPathway: UPA00223 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 Pfam PF00285 Citrate synthase, C-terminal domain 42 421 1.3E-104 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 SUPERFAMILY SSF48256 3 428 1.57E-137 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PANTHER PTHR11739 3 439 5.0E-245 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 Gene3D G3DSA:1.10.580.10 4 322 6.6E-118 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PANTHER PTHR11739:SF8 3 439 5.0E-245 T 23-04-2016 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 247 275 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 224 239 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 369 385 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 390 404 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 308 328 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 PRINTS PR00143 Citrate synthase signature 176 189 3.2E-51 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 NIAKO_RS26835 89d695b9a6d37c9b88b3b1cbcd061773 441 ProSitePatterns PS00480 Citrate synthase signature. 315 327 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 SMART SM00986 6 164 0.0059 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 SMART SM00987 6 164 0.0059 T 23-04-2016 NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 Pfam PF03167 Uracil DNA glycosylase superfamily 8 151 6.7E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 Gene3D G3DSA:3.40.470.10 5 165 5.4E-52 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 SUPERFAMILY SSF52141 5 164 3.6E-39 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS20805 5a0f485028cb11e97a7c22f340d317fb 181 PANTHER PTHR12159 1 163 4.6E-56 T 23-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF49464 137 228 3.4E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF56935 954 998 1.43E-87 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF56935 530 881 1.43E-87 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF56935 409 498 1.43E-87 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF56935 214 359 1.43E-87 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 SUPERFAMILY SSF56935 1041 1091 1.43E-87 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.40.170.20 1051 1119 3.8E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.40.170.20 418 908 3.8E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.40.170.20 963 1008 3.8E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.40.170.20 339 362 3.8E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 136 1135 2.7E-256 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 310 340 4.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.60.40.1120 137 223 6.7E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 PANTHER PTHR11532:SF57 612 1133 2.1E-244 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 PANTHER PTHR11532:SF57 133 519 2.1E-244 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Pfam PF00593 TonB dependent receptor 717 1103 2.3E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 PANTHER PTHR11532 612 1133 2.1E-244 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 PANTHER PTHR11532 133 519 2.1E-244 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Gene3D G3DSA:2.170.130.10 226 338 1.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Pfam PF13715 CarboxypepD_reg-like domain 137 217 3.5E-14 T 23-04-2016 NIAKO_RS03990 c93882690657bfb9b931b73211a278a9 1135 Pfam PF07715 TonB-dependent Receptor Plug Domain 227 334 5.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 Gene3D G3DSA:1.10.10.10 137 188 3.3E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 Pfam PF04542 Sigma-70 region 2 21 88 1.1E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 SUPERFAMILY SSF88946 5 97 3.92E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 Gene3D G3DSA:1.10.1740.10 2 102 5.5E-27 T 23-04-2016 NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 PANTHER PTHR30173 1 188 4.2E-30 T 23-04-2016 NIAKO_RS19100 20b06ba97ae8c7a50658cbbe48274334 293 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 181 1.0E-17 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 8 146 3.8E-47 T 23-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 PIRSF PIRSF005384 6 148 3.3E-51 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 Gene3D G3DSA:3.40.1400.10 7 146 4.2E-56 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 SUPERFAMILY SSF89623 5 146 3.92E-52 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 8 146 6.8E-51 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 PANTHER PTHR30345 1 146 6.1E-59 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS32370 b3d34bcadc3124674b679cc4cc6a056e 148 Pfam PF02502 Ribose/Galactose Isomerase 8 145 1.3E-52 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 Gene3D G3DSA:3.30.390.10 2 172 1.9E-58 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 Pfam PF13378 Enolase C-terminal domain-like 196 406 3.4E-51 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 PANTHER PTHR13794 1 146 1.6E-117 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 PANTHER PTHR13794 181 407 1.6E-117 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 SUPERFAMILY SSF51604 178 405 2.88E-54 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 240 271 - T 23-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 PANTHER PTHR13794:SF58 1 146 1.6E-117 T 23-04-2016 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 PANTHER PTHR13794:SF58 181 407 1.6E-117 T 23-04-2016 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 SUPERFAMILY SSF54826 2 131 1.94E-26 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 SMART SM00922 193 290 2.3E-21 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS18510 0a19c18f00b4fb4e9c36a1e3ebde8b53 407 Gene3D G3DSA:3.20.20.120 173 400 1.1E-65 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 SUPERFAMILY SSF75420 4 82 3.01E-11 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 154 16.591 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 Pfam PF02576 Putative ribosome maturation factor RimP 22 147 5.0E-22 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 PANTHER PTHR33867 1 145 1.4E-21 T 23-04-2016 NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 PANTHER PTHR33867:SF1 1 145 1.4E-21 T 23-04-2016 NIAKO_RS30030 bfb0123a7a4f6f701e03c74acc3bf1ac 154 Gene3D G3DSA:3.30.300.70 4 79 3.9E-7 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 Gene3D G3DSA:1.10.10.60 224 270 4.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 SMART SM00342 234 317 8.1E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 Gene3D G3DSA:1.10.10.60 271 321 1.1E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 SUPERFAMILY SSF52317 1 198 1.92E-34 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 SUPERFAMILY SSF46689 217 268 2.44E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 PANTHER PTHR11019 38 325 2.0E-48 T 23-04-2016 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 PANTHER PTHR11019:SF68 38 325 2.0E-48 T 23-04-2016 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 Gene3D G3DSA:3.40.50.880 4 223 5.4E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 SUPERFAMILY SSF46689 271 321 5.82E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 Pfam PF12833 Helix-turn-helix domain 241 318 4.6E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29100 0a35a711ce72627530c070dd6bec93ac 328 Pfam PF01965 DJ-1/PfpI family 41 177 2.8E-16 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SUPERFAMILY SSF56281 1 215 3.25E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 PANTHER PTHR11935:SF9 3 297 3.8E-90 T 23-04-2016 NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Pfam PF00581 Rhodanese-like domain 260 354 1.8E-8 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Pfam PF00581 Rhodanese-like domain 367 456 8.7E-10 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SUPERFAMILY SSF52821 359 458 1.1E-23 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SUPERFAMILY SSF52821 225 359 2.23E-18 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SMART SM00450 259 357 2.9E-5 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SMART SM00450 364 459 1.1E-14 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 SMART SM00849 12 182 3.0E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Gene3D G3DSA:3.40.250.10 237 358 2.2E-15 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Gene3D G3DSA:3.40.250.10 360 467 9.3E-23 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Gene3D G3DSA:3.60.15.10 4 234 1.1E-55 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 Pfam PF00753 Metallo-beta-lactamase superfamily 15 157 1.9E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04120 8c1d042dc087b10f9a90967ddcd1734f 473 PANTHER PTHR11935 3 297 3.8E-90 T 23-04-2016 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 Gene3D G3DSA:1.20.1600.10 50 475 4.9E-91 T 23-04-2016 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 Pfam PF02321 Outer membrane efflux protein 64 263 6.0E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 Pfam PF02321 Outer membrane efflux protein 291 472 1.0E-15 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 PANTHER PTHR30203 47 475 3.7E-102 T 23-04-2016 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 SUPERFAMILY SSF56954 3 475 1.31E-83 T 23-04-2016 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 PANTHER PTHR30203:SF3 47 475 3.7E-102 T 23-04-2016 NIAKO_RS13840 dcd805943108eae00f138131681f748e 476 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 474 3.0E-64 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NIAKO_RS25680 8fd27011cabe0c71a6024214c899814a 711 Pfam PF05426 Alginate lyase 61 297 1.3E-22 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS25680 8fd27011cabe0c71a6024214c899814a 711 SUPERFAMILY SSF48230 69 315 1.92E-47 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS25680 8fd27011cabe0c71a6024214c899814a 711 Pfam PF07940 Heparinase II/III-like protein 377 635 3.3E-23 T 23-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 NIAKO_RS25680 8fd27011cabe0c71a6024214c899814a 711 Gene3D G3DSA:1.50.10.110 50 357 6.3E-51 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 SMART SM00932 11 97 5.1E-29 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 SUPERFAMILY SSF110836 10 97 1.7E-22 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 Pfam PF01106 NifU-like domain 128 194 3.9E-24 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 136 193 1.0E-15 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 PANTHER PTHR11178:SF1 11 196 5.6E-57 T 23-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 SUPERFAMILY SSF117916 116 195 6.21E-25 T 23-04-2016 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 Gene3D G3DSA:3.30.1370.70 10 98 1.7E-25 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 11 97 3.2E-27 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 PANTHER PTHR11178 11 196 5.6E-57 T 23-04-2016 NIAKO_RS31040 cf6d000da86aad319075e40a973a95c8 198 PIRSF PIRSF036773 1 198 8.1E-63 T 23-04-2016 NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 Pfam PF07690 Major Facilitator Superfamily 15 321 9.4E-20 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 Gene3D G3DSA:1.20.1250.20 201 380 2.1E-14 T 23-04-2016 NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 SUPERFAMILY SSF103473 7 375 2.49E-41 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 PANTHER PTHR23514:SF13 1 381 2.8E-110 T 23-04-2016 NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 PANTHER PTHR23514 1 381 2.8E-110 T 23-04-2016 NIAKO_RS03790 59d1391e4e7669cf299fb785d9f8b326 381 Gene3D G3DSA:1.20.1250.20 11 191 2.8E-21 T 23-04-2016 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 Pfam PF01434 Peptidase family M41 444 645 1.8E-77 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 SUPERFAMILY SSF52540 209 454 1.81E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 ProSitePatterns PS00674 AAA-protein family signature. 353 371 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 656 35.262 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 SMART SM00382 246 385 8.8E-24 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 Gene3D G3DSA:1.10.8.60 392 457 4.4E-28 T 23-04-2016 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 154 647 6.2E-222 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 PANTHER PTHR23076:SF10 32 672 0.0 T 23-04-2016 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 PANTHER PTHR23076 32 672 0.0 T 23-04-2016 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 SUPERFAMILY SSF140990 464 655 1.44E-69 T 23-04-2016 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 251 382 3.7E-44 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS28395 69e04228c030c310a766098c48787cea 687 Gene3D G3DSA:3.40.50.300 210 391 6.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 PANTHER PTHR11751 13 417 7.1E-68 T 23-04-2016 NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 Gene3D G3DSA:3.90.1150.10 282 417 8.0E-13 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 SUPERFAMILY SSF53383 2 416 1.32E-66 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 PANTHER PTHR11751:SF306 13 417 7.1E-68 T 23-04-2016 NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 Pfam PF00155 Aminotransferase class I and II 33 409 3.1E-39 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS29975 4668a7f12e73d5729b76f1450d22783d 418 Gene3D G3DSA:3.40.640.10 51 281 3.3E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 PANTHER PTHR24423 237 515 1.0E-34 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 PANTHER PTHR24423 660 852 1.0E-34 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SUPERFAMILY SSF55785 371 491 1.15E-18 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.450.20 22 133 1.2E-20 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.450.20 489 647 1.2E-26 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.450.20 136 255 2.5E-5 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SUPERFAMILY SSF55785 250 373 3.14E-16 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 140 3.5E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 522 633 8.1E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 382 9.5E-16 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 379 504 1.3E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.565.10 747 852 1.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SUPERFAMILY SSF55785 520 629 4.03E-17 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SUPERFAMILY SSF55785 24 134 8.55E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.450.20 395 488 5.9E-19 T 23-04-2016 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Pfam PF13426 PAS domain 277 373 6.8E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Pfam PF13426 PAS domain 395 497 7.0E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Pfam PF08447 PAS fold 535 620 1.5E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00091 383 451 0.14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00091 510 578 38.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00091 20 86 9.1E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00091 265 333 0.016 T 23-04-2016 IPR000014 PAS domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SUPERFAMILY SSF55874 735 852 1.44E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00086 94 135 5.7 T 23-04-2016 IPR001610 PAC motif NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00086 584 626 1.4E-5 T 23-04-2016 IPR001610 PAC motif NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00086 334 375 1.0 T 23-04-2016 IPR001610 PAC motif NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 SMART SM00086 456 498 1.2E-5 T 23-04-2016 IPR001610 PAC motif NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 768 853 7.0E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Pfam PF00989 PAS fold 23 132 3.8E-11 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS17345 0a4a82c8fd9d32c4bdb2ed7d518ddb5a 854 Gene3D G3DSA:3.30.450.20 256 373 1.5E-16 T 23-04-2016 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 ProSitePatterns PS00433 Phosphofructokinase signature. 251 269 - T 23-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PIRSF PIRSF000532 4 326 3.4E-121 T 23-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 Pfam PF00365 Phosphofructokinase 7 282 6.7E-109 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 SUPERFAMILY SSF53784 3 322 1.44E-115 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PANTHER PTHR13697 7 316 5.2E-138 T 23-04-2016 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PANTHER PTHR13697:SF4 7 316 5.2E-138 T 23-04-2016 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 326 45.707 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 Gene3D G3DSA:3.40.50.450 3 216 2.5E-77 T 23-04-2016 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 247 269 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 1.4E-81 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04825 84ef0c7084a9b7f38a23073f16a3fbb9 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 306 7.0E-131 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS22735 ad34c639da8afb73d7db6e804cb5fa70 144 PANTHER PTHR10516:SF320 46 144 2.3E-20 T 23-04-2016 NIAKO_RS22735 ad34c639da8afb73d7db6e804cb5fa70 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 61 140 4.1E-17 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS22735 ad34c639da8afb73d7db6e804cb5fa70 144 PANTHER PTHR10516 46 144 2.3E-20 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS22735 ad34c639da8afb73d7db6e804cb5fa70 144 Gene3D G3DSA:3.10.50.40 16 143 9.0E-35 T 23-04-2016 NIAKO_RS22735 ad34c639da8afb73d7db6e804cb5fa70 144 SUPERFAMILY SSF54534 19 143 2.36E-31 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 Gene3D G3DSA:3.40.630.10 38 92 3.8E-52 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 Gene3D G3DSA:3.40.630.10 260 451 3.8E-52 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 PANTHER PTHR12053:SF3 38 453 4.6E-123 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 Pfam PF04389 Peptidase family M28 260 440 4.1E-18 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 SUPERFAMILY SSF53187 200 453 1.8E-50 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 PANTHER PTHR12053 38 453 4.6E-123 T 23-04-2016 NIAKO_RS34470 1291e04e180a433be4a7f8930f4681ae 458 Gene3D G3DSA:3.50.30.30 134 259 4.8E-5 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 SMART SM00382 38 181 1.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 Gene3D G3DSA:1.10.8.60 168 241 1.0E-28 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 126 144 2.4E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 42 60 2.4E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 PANTHER PTHR11669:SF0 8 364 1.2E-147 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 Pfam PF13177 DNA polymerase III, delta subunit 21 180 1.6E-44 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 PANTHER PTHR11669 8 364 1.2E-147 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 Gene3D G3DSA:1.20.272.10 245 362 1.6E-6 T 23-04-2016 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 6 359 2.0E-130 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 SUPERFAMILY SSF48019 245 364 3.15E-12 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 Gene3D G3DSA:3.40.50.300 8 167 3.6E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 SUPERFAMILY SSF52540 33 224 7.91E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27165 fc5b46924ecc437739807589b02044da 625 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 245 364 1.1E-7 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 NIAKO_RS30985 ae2da74cc4a158058e46807555659dd2 190 Pfam PF07617 Protein of unknown function (DUF1579) 36 188 3.9E-47 T 23-04-2016 IPR011473 Protein of unknown function DUF1579 NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 Pfam PF00691 OmpA family 432 527 1.6E-21 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 Pfam PF07676 WD40-like Beta Propeller Repeat 224 262 5.4E-8 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 PRINTS PR01021 OMPA domain signature 463 478 6.8E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 PRINTS PR01021 OMPA domain signature 433 455 6.8E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 PRINTS PR01021 OMPA domain signature 478 494 6.8E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 SUPERFAMILY SSF82171 62 316 6.8E-9 T 23-04-2016 NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 Gene3D G3DSA:2.120.10.30 175 322 9.0E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 Gene3D G3DSA:2.120.10.30 56 111 9.0E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 Gene3D G3DSA:3.30.1330.60 421 535 1.6E-42 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 SUPERFAMILY SSF103088 417 533 2.75E-37 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS01250 17e3c92153ad2d10eb7bf068b3543f18 536 PANTHER PTHR30128 418 534 3.8E-48 T 23-04-2016 NIAKO_RS26100 730764d367aef39d78a9493aa42a1f3b 609 Pfam PF07980 SusD family 373 609 5.9E-35 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS26100 730764d367aef39d78a9493aa42a1f3b 609 Gene3D G3DSA:1.25.40.10 213 468 1.1E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26100 730764d367aef39d78a9493aa42a1f3b 609 Pfam PF14322 Starch-binding associating with outer membrane 68 232 2.2E-18 T 23-04-2016 NIAKO_RS26100 730764d367aef39d78a9493aa42a1f3b 609 SUPERFAMILY SSF48452 21 496 1.26E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26100 730764d367aef39d78a9493aa42a1f3b 609 SUPERFAMILY SSF48452 577 609 1.26E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 PANTHER PTHR11995:SF14 21 208 4.7E-103 T 23-04-2016 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 PANTHER PTHR11995 21 208 4.7E-103 T 23-04-2016 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 78 162 1.4E-21 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 136 152 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 19 169 41.189 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 Gene3D G3DSA:3.40.50.700 40 166 1.8E-30 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 SUPERFAMILY SSF56770 28 177 5.36E-62 T 23-04-2016 NIAKO_RS14590 9b7e526d840f241fc7ad55035c917621 212 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 29 169 1.9E-66 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS14100 2538a8afbd42cc56cd05018a88f7caa1 606 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 112 142 3.0E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 PANTHER PTHR30349:SF26 50 417 8.7E-74 T 23-04-2016 NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 SUPERFAMILY SSF56349 118 395 1.06E-45 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 Pfam PF13102 Phage integrase SAM-like domain 13 176 1.0E-21 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 Gene3D G3DSA:1.10.150.130 117 213 3.3E-7 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 Gene3D G3DSA:1.10.443.10 224 402 1.3E-32 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 Pfam PF00589 Phage integrase family 226 390 2.1E-17 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS29580 5a522b869cf7c1c9c1eede3ca802d449 417 PANTHER PTHR30349 50 417 8.7E-74 T 23-04-2016 NIAKO_RS17165 ff8a82db8e3c570f2e68d77ab23c2bdf 104 SUPERFAMILY SSF48452 19 87 6.64E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17165 ff8a82db8e3c570f2e68d77ab23c2bdf 104 Pfam PF13424 Tetratricopeptide repeat 20 86 1.2E-11 T 23-04-2016 NIAKO_RS17165 ff8a82db8e3c570f2e68d77ab23c2bdf 104 Gene3D G3DSA:1.25.40.10 20 90 8.2E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12490 f8a4e2b15c2ecdb5fc865438ea74b125 282 PANTHER PTHR30273:SF2 3 281 1.6E-26 T 23-04-2016 NIAKO_RS12490 f8a4e2b15c2ecdb5fc865438ea74b125 282 PIRSF PIRSF018266 3 282 4.6E-42 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS12490 f8a4e2b15c2ecdb5fc865438ea74b125 282 Pfam PF16344 Domain of unknown function (DUF4974) 192 280 4.4E-7 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS12490 f8a4e2b15c2ecdb5fc865438ea74b125 282 PANTHER PTHR30273 3 281 1.6E-26 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS12490 f8a4e2b15c2ecdb5fc865438ea74b125 282 Pfam PF04773 FecR protein 90 180 2.1E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS24900 ae71e6c2e14b6a78512ce392210f863d 459 SUPERFAMILY SSF46626 437 459 5.08E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS24900 ae71e6c2e14b6a78512ce392210f863d 459 SUPERFAMILY SSF46626 274 391 5.08E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS24900 ae71e6c2e14b6a78512ce392210f863d 459 Gene3D G3DSA:1.10.760.10 280 393 3.4E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS24900 ae71e6c2e14b6a78512ce392210f863d 459 Gene3D G3DSA:1.10.760.10 439 459 3.4E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Gene3D G3DSA:2.60.40.1120 136 219 1.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 134 1159 3.9E-261 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF49464 134 214 2.22E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 334 364 2.8E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Gene3D G3DSA:2.170.130.10 220 358 2.2E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Pfam PF13715 CarboxypepD_reg-like domain 138 216 5.3E-12 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532:SF57 325 484 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532:SF57 133 298 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532:SF57 625 1157 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532:SF57 505 560 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Gene3D G3DSA:2.40.170.20 439 905 1.1E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Gene3D G3DSA:2.40.170.20 992 1158 1.1E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Gene3D G3DSA:2.40.170.20 359 378 1.1E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF56935 1066 1158 8.7E-92 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF56935 553 896 8.7E-92 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF56935 213 382 8.7E-92 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF56935 983 1027 8.7E-92 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 SUPERFAMILY SSF56935 430 518 8.7E-92 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 Pfam PF07715 TonB-dependent Receptor Plug Domain 224 358 1.9E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532 325 484 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532 133 298 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532 625 1157 3.0E-249 T 23-04-2016 NIAKO_RS11935 e3848acaf22018fe701b625371dbca06 1159 PANTHER PTHR11532 505 560 3.0E-249 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82693 554 655 5.93E-16 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PANTHER PTHR32063:SF14 1 1020 0.0 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:1.20.1640.10 287 498 1.5E-56 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:3.30.70.1430 559 654 4.2E-12 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PANTHER PTHR32063 1 1020 0.0 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82866 290 489 5.49E-49 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82714 183 266 2.88E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:3.30.70.1430 40 140 1.6E-30 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82693 268 324 2.09E-16 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:3.30.2090.10 705 789 5.4E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:3.30.2090.10 183 266 1.6E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Pfam PF00873 AcrB/AcrD/AcrF family 3 1010 1.2E-290 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82693 40 133 5.23E-25 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 Gene3D G3DSA:1.10.3850.10 798 1012 5.1E-62 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82714 706 789 7.85E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82693 139 182 2.09E-16 T 23-04-2016 NIAKO_RS12655 948eedfdd008c70685534e45a77dced0 1030 SUPERFAMILY SSF82866 791 1015 1.44E-48 T 23-04-2016 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Pfam PF13426 PAS domain 18 121 1.8E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Gene3D G3DSA:1.10.287.130 181 241 1.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 190 257 3.3E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SMART SM00387 301 411 2.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SMART SM00091 7 72 2.2E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SUPERFAMILY SSF55785 18 129 3.54E-25 T 23-04-2016 IPR000014 PAS domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Gene3D G3DSA:3.30.565.10 242 412 2.5E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SUPERFAMILY SSF55874 246 409 3.8E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PANTHER PTHR24423 9 140 2.0E-79 T 23-04-2016 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PANTHER PTHR24423 187 408 2.0E-79 T 23-04-2016 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 129 2.4E-24 T 23-04-2016 IPR000014 PAS domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 409 9.4E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 Gene3D G3DSA:3.30.450.20 9 121 8.0E-19 T 23-04-2016 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SUPERFAMILY SSF47384 175 258 7.06E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 SMART SM00388 189 257 2.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 1.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 1.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 1.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09575 04075e62570c8de26d8bc91311e09696 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 408 1.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS10745 21f8738fd92c4c11e098ec8550a28b54 151 Pfam PF12893 Putative lumazine-binding 24 138 1.5E-6 T 23-04-2016 NIAKO_RS10745 21f8738fd92c4c11e098ec8550a28b54 151 SUPERFAMILY SSF54427 23 146 8.44E-17 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS10745 21f8738fd92c4c11e098ec8550a28b54 151 Gene3D G3DSA:3.10.450.50 19 138 1.2E-11 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 1.6E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 1.6E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 SUPERFAMILY SSF54814 175 288 1.37E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 Hamap MF_00367 GTPase Era [era]. 1 288 33.459 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 Gene3D G3DSA:3.40.50.300 6 184 4.0E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 Gene3D G3DSA:3.30.300.20 185 284 2.4E-36 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 PANTHER PTHR11649 2 288 1.1E-99 T 23-04-2016 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 Pfam PF07650 KH domain 201 277 4.7E-17 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 TIGRFAM TIGR00436 era: GTP-binding protein Era 4 271 4.4E-76 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 PANTHER PTHR11649:SF3 2 288 1.1E-99 T 23-04-2016 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 160 1.6E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 Pfam PF01926 50S ribosome-binding GTPase 6 118 3.8E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01625 3e8ba91ecf93bddc3143abd3a6cfd42d 289 SUPERFAMILY SSF52540 6 197 3.91E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PANTHER PTHR21235:SF1 2 194 3.2E-70 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 Pfam PF00117 Glutamine amidotransferase class-I 13 193 1.2E-17 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 SUPERFAMILY SSF52317 4 195 3.53E-46 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 Gene3D G3DSA:3.40.50.880 2 196 1.7E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PIRSF PIRSF000495 1 196 5.4E-64 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 195 1.7E-62 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PANTHER PTHR21235 2 194 3.2E-70 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PRINTS PR00097 Anthranilate synthase component II signature 174 187 3.3E-5 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PRINTS PR00097 Anthranilate synthase component II signature 72 83 3.3E-5 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PRINTS PR00097 Anthranilate synthase component II signature 41 50 3.3E-5 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 31.361 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 8.6E-5 T 23-04-2016 NIAKO_RS01800 0d91bffa36a476e115aad7b88651324f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 8.6E-5 T 23-04-2016 NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 PANTHER PTHR22935:SF10 122 390 2.4E-12 T 23-04-2016 NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 SUPERFAMILY SSF56601 4 64 3.26E-48 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 SUPERFAMILY SSF56601 96 392 3.26E-48 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 PANTHER PTHR22935 122 390 2.4E-12 T 23-04-2016 NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 Pfam PF00144 Beta-lactamase 120 390 6.7E-12 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS10210 69f5227d53343a42fea5d05d54b18c85 411 Gene3D G3DSA:3.40.710.10 120 390 2.0E-23 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS17505 97f04d4936dc52a26f6f604c8f19f01a 146 Gene3D G3DSA:3.30.530.20 5 126 2.8E-14 T 23-04-2016 IPR023393 START-like domain NIAKO_RS17505 97f04d4936dc52a26f6f604c8f19f01a 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 120 3.0E-7 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS17505 97f04d4936dc52a26f6f604c8f19f01a 146 SUPERFAMILY SSF55961 5 144 1.93E-17 T 23-04-2016 NIAKO_RS34485 4a117cad6a2a72a9493853deddb8cdb3 256 PANTHER PTHR37468 1 244 1.5E-20 T 23-04-2016 NIAKO_RS34485 4a117cad6a2a72a9493853deddb8cdb3 256 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 235 4.8E-24 T 23-04-2016 NIAKO_RS02460 626087b35930c9e3acac9e6149916493 308 PANTHER PTHR14194 1 159 4.5E-22 T 23-04-2016 NIAKO_RS02460 626087b35930c9e3acac9e6149916493 308 PANTHER PTHR14194 182 308 4.5E-22 T 23-04-2016 NIAKO_RS02460 626087b35930c9e3acac9e6149916493 308 Gene3D G3DSA:3.40.50.720 1 206 1.3E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02460 626087b35930c9e3acac9e6149916493 308 Pfam PF13460 NAD(P)H-binding 7 204 1.3E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02460 626087b35930c9e3acac9e6149916493 308 SUPERFAMILY SSF51735 1 273 5.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 150 237 1.3E-26 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 PANTHER PTHR10516 119 239 6.4E-59 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 SUPERFAMILY SSF54534 46 239 7.07E-56 T 23-04-2016 NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 Gene3D G3DSA:3.10.50.40 126 239 1.9E-45 T 23-04-2016 NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 PANTHER PTHR10516:SF320 119 239 6.4E-59 T 23-04-2016 NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 Gene3D G3DSA:1.10.287.460 42 125 8.6E-19 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 NIAKO_RS21390 a3aa4c534c5234b3c76aee6b01ba18b0 242 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 142 6.7E-22 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Pfam PF13840 ACT domain 394 459 4.2E-8 T 23-04-2016 IPR027795 GATS-like ACT domain NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 SUPERFAMILY SSF55021 307 383 9.92E-19 T 23-04-2016 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 PANTHER PTHR21499:SF3 3 473 1.8E-140 T 23-04-2016 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Gene3D G3DSA:3.30.360.10 639 794 6.2E-50 T 23-04-2016 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 PIRSF PIRSF000727 1 816 1.7E-284 T 23-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Gene3D G3DSA:3.40.1160.10 112 300 1.1E-62 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Gene3D G3DSA:3.40.1160.10 1 52 1.1E-62 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 663 685 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 463 2.6E-123 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 475 608 4.2E-16 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 PANTHER PTHR21499 3 473 1.8E-140 T 23-04-2016 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Gene3D G3DSA:3.40.50.720 467 638 4.2E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 SUPERFAMILY SSF55021 388 466 5.29E-23 T 23-04-2016 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 SUPERFAMILY SSF51735 467 638 4.92E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Pfam PF00742 Homoserine dehydrogenase 617 812 7.6E-50 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 SUPERFAMILY SSF53633 1 300 6.28E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 Pfam PF00696 Amino acid kinase family 2 286 6.0E-48 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00550 9fa691df1e3b98ef10c7c56af4f7e4df 816 SUPERFAMILY SSF55347 617 799 3.2E-43 T 23-04-2016 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 Gene3D G3DSA:2.40.50.40 143 212 7.2E-13 T 23-04-2016 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 PANTHER PTHR26402 1 114 1.5E-18 T 23-04-2016 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 Pfam PF00072 Response regulator receiver domain 3 111 2.2E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 SMART SM00850 152 252 7.8E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 SMART SM00448 1 111 3.9E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 Pfam PF04397 LytTr DNA-binding domain 153 251 1.6E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 Gene3D G3DSA:3.40.50.2300 1 122 3.4E-20 T 23-04-2016 NIAKO_RS26795 43b68a70cbd1646d591b088c4da6af6c 254 SUPERFAMILY SSF52172 1 125 4.41E-18 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 412 504 7.2E-17 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 Gene3D G3DSA:3.50.50.60 19 286 2.7E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 SUPERFAMILY SSF51905 19 245 2.98E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PANTHER PTHR11985:SF1 6 517 3.4E-198 T 23-04-2016 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 Pfam PF01266 FAD dependent oxidoreductase 23 348 9.0E-44 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 369 381 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 337 343 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 1.4E-26 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 PANTHER PTHR11985 6 517 3.4E-198 T 23-04-2016 NIAKO_RS03495 c9b386003dbc061134682115bd0ce625 524 SUPERFAMILY SSF54373 251 343 2.75E-7 T 23-04-2016 NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 Gene3D G3DSA:1.25.40.10 386 480 5.1E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 Gene3D G3DSA:1.25.40.10 192 321 5.1E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 Pfam PF14322 Starch-binding associating with outer membrane 40 209 2.1E-6 T 23-04-2016 NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 Pfam PF07980 SusD family 241 533 1.1E-20 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 SUPERFAMILY SSF48452 19 346 3.79E-76 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29750 926c48260d021464158eb8c734bfa1eb 535 SUPERFAMILY SSF48452 373 533 3.79E-76 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 PANTHER PTHR23526 1 396 1.9E-57 T 23-04-2016 NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 Pfam PF07690 Major Facilitator Superfamily 33 349 2.1E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 SUPERFAMILY SSF103473 27 419 9.94E-27 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 PANTHER PTHR23526:SF2 1 396 1.9E-57 T 23-04-2016 NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 Gene3D G3DSA:1.20.1250.20 35 217 5.3E-7 T 23-04-2016 NIAKO_RS25995 76924bfe18897ce2b5461c87a3c56345 491 Gene3D G3DSA:1.20.1250.20 235 426 3.3E-11 T 23-04-2016 NIAKO_RS01865 ad5b9621d9849f4301698f763e9625c8 163 PANTHER PTHR13947:SF7 1 161 9.5E-30 T 23-04-2016 NIAKO_RS01865 ad5b9621d9849f4301698f763e9625c8 163 Pfam PF00583 Acetyltransferase (GNAT) family 60 139 7.4E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS01865 ad5b9621d9849f4301698f763e9625c8 163 PANTHER PTHR13947 1 161 9.5E-30 T 23-04-2016 NIAKO_RS01865 ad5b9621d9849f4301698f763e9625c8 163 SUPERFAMILY SSF55729 2 159 4.22E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01865 ad5b9621d9849f4301698f763e9625c8 163 Gene3D G3DSA:3.40.630.30 2 161 6.8E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 SUPERFAMILY SSF56601 238 599 5.63E-89 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 8 600 9.2E-149 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 Gene3D G3DSA:3.90.1310.10 117 235 2.5E-22 T 23-04-2016 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 591 1.6E-67 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 PANTHER PTHR30627:SF2 6 636 7.3E-151 T 23-04-2016 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 PANTHER PTHR30627 6 636 7.3E-151 T 23-04-2016 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 Pfam PF03717 Penicillin-binding Protein dimerisation domain 52 218 6.0E-28 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 SUPERFAMILY SSF56519 46 235 9.16E-35 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS33855 e3ebaff0d6787bb6c526357436aebe29 700 Gene3D G3DSA:3.40.710.10 238 600 2.5E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS13040 e1898e2da4587b38c3b881abbad6847e 248 PANTHER PTHR40469:SF1 4 242 5.2E-56 T 23-04-2016 NIAKO_RS13040 e1898e2da4587b38c3b881abbad6847e 248 Pfam PF06283 Trehalose utilisation 31 241 4.7E-80 T 23-04-2016 IPR029010 ThuA-like domain NIAKO_RS13040 e1898e2da4587b38c3b881abbad6847e 248 Gene3D G3DSA:3.40.50.880 31 244 3.5E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS13040 e1898e2da4587b38c3b881abbad6847e 248 SUPERFAMILY SSF52317 30 245 1.42E-45 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS13040 e1898e2da4587b38c3b881abbad6847e 248 PANTHER PTHR40469 4 242 5.2E-56 T 23-04-2016 NIAKO_RS10180 12459ef554be513e609760d43f1fcfeb 193 Pfam PF00881 Nitroreductase family 11 172 4.8E-17 T 23-04-2016 IPR029479 Nitroreductase NIAKO_RS10180 12459ef554be513e609760d43f1fcfeb 193 PANTHER PTHR23026 5 193 9.5E-45 T 23-04-2016 NIAKO_RS10180 12459ef554be513e609760d43f1fcfeb 193 Gene3D G3DSA:3.40.109.10 4 192 5.9E-35 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS10180 12459ef554be513e609760d43f1fcfeb 193 PANTHER PTHR23026:SF104 5 193 9.5E-45 T 23-04-2016 NIAKO_RS10180 12459ef554be513e609760d43f1fcfeb 193 SUPERFAMILY SSF55469 8 192 3.53E-28 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 SUPERFAMILY SSF51430 1 323 6.29E-93 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PANTHER PTHR11732:SF260 1 324 1.3E-134 T 23-04-2016 NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 Pfam PF00248 Aldo/keto reductase family 16 319 2.7E-71 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PANTHER PTHR11732 1 324 1.3E-134 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 273 286 1.7E-10 T 23-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 209 215 1.7E-10 T 23-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 260 272 1.7E-10 T 23-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 1.7E-10 T 23-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 1.7E-10 T 23-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related NIAKO_RS32230 964f76c70b10cae6f5a0aa586c6cb501 328 Gene3D G3DSA:3.20.20.100 1 323 1.6E-97 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 299 16.351 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 PANTHER PTHR11048:SF3 17 298 6.9E-89 T 23-04-2016 NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 PANTHER PTHR11048 17 298 6.9E-89 T 23-04-2016 NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 Pfam PF01040 UbiA prenyltransferase family 34 282 1.4E-52 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 297 3.1E-81 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NIAKO_RS31865 0bb2d66c1539e387fcdeacc507410574 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 SUPERFAMILY SSF103473 8 392 1.09E-48 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 Gene3D G3DSA:1.20.1250.20 208 397 1.3E-6 T 23-04-2016 NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 PANTHER PTHR23502 7 396 1.1E-64 T 23-04-2016 NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 Pfam PF07690 Major Facilitator Superfamily 22 354 9.4E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 PANTHER PTHR23502:SF63 7 396 1.1E-64 T 23-04-2016 NIAKO_RS29280 fea0e1c044a9d0a4630f5453a180d7f0 412 Gene3D G3DSA:1.20.1250.20 20 186 6.7E-28 T 23-04-2016 NIAKO_RS02075 860c241c1a3375c394c959dfea0ecfda 155 Pfam PF00075 RNase H 6 142 1.6E-39 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 NIAKO_RS02075 860c241c1a3375c394c959dfea0ecfda 155 Hamap MF_00042 Ribonuclease H [rnhA]. 5 151 25.971 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 NIAKO_RS02075 860c241c1a3375c394c959dfea0ecfda 155 Gene3D G3DSA:3.30.420.10 6 145 1.5E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS02075 860c241c1a3375c394c959dfea0ecfda 155 SUPERFAMILY SSF53098 6 143 1.39E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS02075 860c241c1a3375c394c959dfea0ecfda 155 PANTHER PTHR10642 5 143 1.1E-44 T 23-04-2016 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 PIRSF PIRSF006004 4 349 1.8E-122 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 SMART SM00729 105 322 0.0048 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 350 65.983 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 PANTHER PTHR30544 8 347 3.0E-143 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 Gene3D G3DSA:3.20.20.70 108 333 2.2E-19 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 Pfam PF13394 4Fe-4S single cluster domain 114 218 3.4E-7 T 23-04-2016 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 PANTHER PTHR30544:SF5 8 347 3.0E-143 T 23-04-2016 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 348 6.0E-118 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 Pfam PF04055 Radical SAM superfamily 110 277 1.3E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS34690 40cd5d86e711130a9c260e3ee7f05f89 350 SUPERFAMILY SSF102114 107 333 2.62E-17 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 SUPERFAMILY SSF54980 392 463 6.12E-13 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Pfam PF00009 Elongation factor Tu GTP binding domain 9 276 5.1E-51 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Gene3D G3DSA:2.40.30.10 291 393 7.0E-23 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 162 1.6E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PANTHER PTHR23115 250 465 6.8E-212 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PANTHER PTHR23115 1 181 6.8E-212 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Gene3D G3DSA:3.40.50.300 5 280 1.5E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Gene3D G3DSA:3.30.70.870 394 462 4.2E-10 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 526 48.828 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 SUPERFAMILY SSF52540 6 276 5.69E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.2E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.2E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.2E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.2E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.2E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 526 1.2E-204 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 512 9.5E-45 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 SUPERFAMILY SSF50447 260 392 2.47E-27 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PANTHER PTHR23115:SF69 250 465 6.8E-212 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 PANTHER PTHR23115:SF69 1 181 6.8E-212 T 23-04-2016 NIAKO_RS14865 06c52fdf2540c97c38d590a791fcbb68 533 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 PANTHER PTHR11695 16 302 6.0E-84 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 Gene3D G3DSA:3.90.180.10 1 152 1.8E-36 T 23-04-2016 IPR011032 GroES-like NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 SUPERFAMILY SSF50129 1 150 1.02E-32 T 23-04-2016 IPR011032 GroES-like NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 SUPERFAMILY SSF51735 118 274 2.55E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.5E-7 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 PANTHER PTHR11695:SF533 16 302 6.0E-84 T 23-04-2016 NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 SMART SM00829 12 301 8.8E-15 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 Pfam PF00107 Zinc-binding dehydrogenase 158 246 5.0E-16 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS20980 e1eac6b362542641d7da9212c73d9a6c 305 Gene3D G3DSA:3.40.50.720 153 241 1.8E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 SUPERFAMILY SSF51971 135 381 1.29E-55 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 SUPERFAMILY SSF46548 3 147 7.32E-33 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Gene3D G3DSA:3.50.50.60 372 444 4.2E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Gene3D G3DSA:3.50.50.60 138 234 1.2E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 15 125 2.2E-34 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Gene3D G3DSA:3.50.50.60 235 371 1.8E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PANTHER PTHR11938 26 446 3.7E-91 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PRINTS PR00419 Adrenodoxin reductase family signature 138 160 1.0E-18 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PRINTS PR00419 Adrenodoxin reductase family signature 272 286 1.0E-18 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PRINTS PR00419 Adrenodoxin reductase family signature 204 214 1.0E-18 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PRINTS PR00419 Adrenodoxin reductase family signature 161 174 1.0E-18 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 SUPERFAMILY SSF51971 362 433 2.94E-6 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Gene3D G3DSA:1.10.1060.10 4 137 9.4E-36 T 23-04-2016 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 433 1.8E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS02260 742b33afb95946391745e6a455c4041d 447 PANTHER PTHR11938:SF108 26 446 3.7E-91 T 23-04-2016 NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 PIRSF PIRSF000709 2 186 2.4E-10 T 23-04-2016 NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 Gene3D G3DSA:3.40.50.1240 2 195 1.1E-53 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 PANTHER PTHR23029 4 196 9.2E-48 T 23-04-2016 NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 SUPERFAMILY SSF53254 1 195 1.19E-53 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 193 3.4E-54 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS17275 79487bee47552d0da906fa1d61cb7751 198 SMART SM00855 3 156 6.1E-20 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 Pfam PF00753 Metallo-beta-lactamase superfamily 89 260 4.0E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 Gene3D G3DSA:3.60.15.10 37 315 2.0E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 SUPERFAMILY SSF56281 37 316 4.46E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 SMART SM00849 90 295 2.9E-16 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 PANTHER PTHR23200 8 322 3.9E-69 T 23-04-2016 NIAKO_RS11410 14f97ecac79a85e56c4b8c65f1994a7f 322 PANTHER PTHR23200:SF46 8 322 3.9E-69 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 PANTHER PTHR30069 7 691 4.3E-52 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 PANTHER PTHR30069 722 1014 4.3E-52 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 Pfam PF13620 Carboxypeptidase regulatory-like domain 31 107 1.1E-16 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 Gene3D G3DSA:2.60.40.1120 32 126 2.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF56935 720 765 3.2E-41 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF56935 795 911 3.2E-41 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF56935 110 316 3.2E-41 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF56935 356 675 3.2E-41 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF56935 969 1019 3.2E-41 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 PANTHER PTHR30069:SF6 7 691 4.3E-52 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 PANTHER PTHR30069:SF6 722 1014 4.3E-52 T 23-04-2016 NIAKO_RS35050 c42cf85683f5f11aa7ce341ca42fc751 1073 SUPERFAMILY SSF49464 32 125 9.22E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 SUPERFAMILY SSF81296 54 119 1.08E-10 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Gene3D G3DSA:2.60.40.10 32 142 7.2E-32 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 SUPERFAMILY SSF51445 100 539 6.24E-104 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Gene3D G3DSA:2.60.40.1180 548 648 1.2E-22 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 PANTHER PTHR10357 32 648 1.0E-286 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 551 648 4.6E-13 T 23-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Pfam PF00128 Alpha amylase, catalytic domain 293 503 2.2E-5 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Pfam PF00128 Alpha amylase, catalytic domain 199 271 7.8E-10 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 SUPERFAMILY SSF51011 548 648 6.76E-20 T 23-04-2016 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 PIRSF PIRSF000463 7 648 9.6E-248 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 52 127 5.6E-20 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 SMART SM00642 170 517 6.4E-8 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 PANTHER PTHR10357:SF160 32 648 1.0E-286 T 23-04-2016 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 28 648 2.0E-236 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 11 648 39.169 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10395 9b03ebef249a703a2f87fe334abf2b6d 648 Gene3D G3DSA:3.20.20.80 166 528 6.8E-84 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 41 234 1.8E-76 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 Gene3D G3DSA:3.40.50.620 9 206 3.5E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 210 1.2E-41 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 PANTHER PTHR23293:SF5 23 236 1.2E-66 T 23-04-2016 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 23 235 3.1E-54 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 PANTHER PTHR23293 23 236 1.2E-66 T 23-04-2016 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 PIRSF PIRSF000857 1 238 1.2E-78 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 NIAKO_RS34335 5469104fcd617f3f56e5c2abd0b5f36a 238 SUPERFAMILY SSF52402 19 198 4.25E-41 T 23-04-2016 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533 8 129 4.6E-38 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533 307 573 4.6E-38 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533 158 272 4.6E-38 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 Gene3D G3DSA:1.10.390.10 449 575 4.7E-13 T 23-04-2016 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 SUPERFAMILY SSF55486 363 576 1.37E-35 T 23-04-2016 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533:SF163 8 129 4.6E-38 T 23-04-2016 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533:SF163 307 573 4.6E-38 T 23-04-2016 NIAKO_RS21815 743b588a8413019f22e8b52a435cc0c0 793 PANTHER PTHR11533:SF163 158 272 4.6E-38 T 23-04-2016 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 49 138 2.8E-8 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 538 650 3.7E-8 T 23-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 319 508 2.6E-52 T 23-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 SUPERFAMILY SSF48208 266 671 1.08E-84 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 Gene3D G3DSA:2.70.98.40 30 144 9.8E-5 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 PANTHER PTHR11051 91 674 5.2E-125 T 23-04-2016 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 SUPERFAMILY SSF74650 27 262 2.04E-6 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS09615 4657430d5f6ce06f7d02b32d00937fb0 683 Gene3D G3DSA:1.50.10.10 312 641 1.3E-102 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS17610 2551f90ba62744296d8d2a59419d9e1c 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 7.1E-14 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis NIAKO_RS17610 2551f90ba62744296d8d2a59419d9e1c 67 Pfam PF02597 ThiS family 3 67 3.1E-6 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NIAKO_RS17610 2551f90ba62744296d8d2a59419d9e1c 67 Gene3D G3DSA:3.10.20.30 1 67 4.8E-16 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS17610 2551f90ba62744296d8d2a59419d9e1c 67 PANTHER PTHR34472 1 67 5.8E-14 T 23-04-2016 NIAKO_RS17610 2551f90ba62744296d8d2a59419d9e1c 67 SUPERFAMILY SSF54285 1 67 3.55E-11 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 PANTHER PTHR30069 3 260 1.6E-41 T 23-04-2016 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 242 1.1E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Gene3D G3DSA:2.60.40.1120 43 116 5.5E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 SUPERFAMILY SSF49464 41 126 6.67E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Pfam PF13715 CarboxypepD_reg-like domain 43 128 1.1E-19 T 23-04-2016 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 PANTHER PTHR30069:SF2 3 260 1.6E-41 T 23-04-2016 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Gene3D G3DSA:2.170.130.10 117 244 5.1E-33 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Pfam PF00593 TonB dependent receptor 527 805 1.7E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 Gene3D G3DSA:2.40.170.20 245 806 4.3E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08045 09cfe1f3d3149361c1c61778238c03d9 812 SUPERFAMILY SSF56935 124 806 7.33E-88 T 23-04-2016 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 57 263 4.0E-52 T 23-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 270 290 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 446 461 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 387 409 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 499 515 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 524 540 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 219 234 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 334 349 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PRINTS PR00743 Glycosyl hydrolase family 36 signature 306 320 1.6E-46 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 ProSitePatterns PS00512 Alpha-galactosidase signature. 335 353 - T 23-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 Gene3D G3DSA:3.20.20.70 308 592 1.9E-41 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 625 701 2.4E-14 T 23-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PANTHER PTHR22762:SF81 306 646 1.4E-67 T 23-04-2016 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PANTHER PTHR22762 306 646 1.4E-67 T 23-04-2016 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 Pfam PF02065 Melibiase 268 609 5.9E-110 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 PIRSF PIRSF005536 11 716 3.6E-223 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS26440 ea6edf50fca6ef6eca2513e99265fe66 716 SUPERFAMILY SSF51445 303 640 6.02E-90 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS29240 c55c3b470751cbb1121f7e21c3739d18 360 Gene3D G3DSA:3.40.50.620 217 307 1.1E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS29240 c55c3b470751cbb1121f7e21c3739d18 360 Pfam PF02698 DUF218 domain 198 311 1.3E-12 T 23-04-2016 IPR003848 Domain of unknown function DUF218 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 3.9E-10 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 63 1.6E-8 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 PANTHER PTHR23416:SF8 1 247 1.4E-108 T 23-04-2016 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 173 254 7.8E-24 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 PIRSF PIRSF000456 1 263 9.9E-99 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 Gene3D G3DSA:1.20.1180.10 190 255 4.3E-20 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 PANTHER PTHR23416 1 247 1.4E-108 T 23-04-2016 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 Gene3D G3DSA:2.160.10.10 1 181 9.7E-54 T 23-04-2016 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 253 1.5E-97 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NIAKO_RS34260 e59c89228d461e0d5f8f3b5f046fe27b 268 SUPERFAMILY SSF51161 1 254 2.9E-75 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 SUPERFAMILY SSF46689 227 276 9.41E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 Pfam PF09828 Chromate resistance exported protein 3 135 6.0E-50 T 23-04-2016 IPR018634 Chromate resistance exported protein NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 Gene3D G3DSA:1.10.10.60 227 275 1.0E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 SUPERFAMILY SSF46689 176 224 7.62E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 PANTHER PTHR11019:SF141 174 279 8.5E-30 T 23-04-2016 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 2.6E-8 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 2.6E-8 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 Gene3D G3DSA:1.10.10.60 174 226 1.8E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 SMART SM00342 189 273 6.6E-29 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 Pfam PF12833 Helix-turn-helix domain 195 274 4.5E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21105 96b72afc4f2e378e3ad9c860e93d251d 279 PANTHER PTHR11019 174 279 8.5E-30 T 23-04-2016 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 1.7E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 PANTHER PTHR26402:SF606 4 228 1.9E-67 T 23-04-2016 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 SMART SM00862 151 226 7.5E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 SMART SM00448 4 115 5.8E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 Gene3D G3DSA:1.10.10.10 136 229 1.2E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 SUPERFAMILY SSF52172 2 126 5.55E-40 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 Pfam PF00072 Response regulator receiver domain 6 115 8.5E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 Gene3D G3DSA:3.40.50.2300 2 133 3.1E-42 T 23-04-2016 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 SUPERFAMILY SSF46894 132 227 1.16E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS18980 124d7f3a580869a955e2d23da5bc81d3 231 PANTHER PTHR26402 4 228 1.9E-67 T 23-04-2016 NIAKO_RS20280 7f05c1c06efc1eb507481353f89b1e0f 360 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 28 360 6.1E-89 T 23-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 NIAKO_RS20280 7f05c1c06efc1eb507481353f89b1e0f 360 SUPERFAMILY SSF56935 24 350 9.34E-7 T 23-04-2016 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 Pfam PF00455 DeoR C terminal sensor domain 74 230 2.2E-36 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 SUPERFAMILY SSF46785 4 59 1.18E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 SMART SM00420 6 58 6.5E-11 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 Gene3D G3DSA:1.10.10.10 1 55 1.1E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.1E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.1E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 PANTHER PTHR30363 1 248 1.3E-50 T 23-04-2016 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 SUPERFAMILY SSF100950 74 232 1.08E-24 T 23-04-2016 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 Gene3D G3DSA:3.40.50.1360 74 211 7.6E-10 T 23-04-2016 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 SMART SM01134 71 232 1.1E-41 T 23-04-2016 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.3E-12 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS05995 50943072ad2b302b88530dfcabc47eed 249 PANTHER PTHR30363:SF1 1 248 1.3E-50 T 23-04-2016 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 PANTHER PTHR10357 137 153 2.4E-77 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 PANTHER PTHR10357 171 583 2.4E-77 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Gene3D G3DSA:2.60.40.10 22 97 3.6E-18 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 SUPERFAMILY SSF51011 546 623 3.6E-12 T 23-04-2016 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Gene3D G3DSA:2.60.40.1180 546 622 4.6E-19 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 547 620 1.2E-22 T 23-04-2016 IPR019492 Cyclo-malto-dextrinase, C-terminal UniPathway: UPA00153 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 SUPERFAMILY SSF81296 23 120 2.94E-15 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 SMART SM00642 139 536 2.0E-54 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 SUPERFAMILY SSF51445 135 545 6.56E-88 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 PANTHER PTHR10357:SF11 137 153 2.4E-77 T 23-04-2016 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 PANTHER PTHR10357:SF11 171 583 2.4E-77 T 23-04-2016 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Gene3D G3DSA:3.20.20.80 136 545 9.8E-91 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Pfam PF09087 Cyclomaltodextrinase, N-terminal 27 120 1.2E-21 T 23-04-2016 IPR015171 Cyclomaltodextrinase, N-terminal UniPathway: UPA00153 NIAKO_RS10585 fa89e3a05b75df740de654d14d8d4593 636 Pfam PF00128 Alpha amylase, catalytic domain 174 493 1.1E-49 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS33175 8e65748b5c3c46dd369029eb5e9b8bcc 187 SUPERFAMILY SSF109854 25 79 7.69E-9 T 23-04-2016 NIAKO_RS33175 8e65748b5c3c46dd369029eb5e9b8bcc 187 SUPERFAMILY SSF109854 108 177 7.69E-9 T 23-04-2016 NIAKO_RS33175 8e65748b5c3c46dd369029eb5e9b8bcc 187 Pfam PF12867 DinB superfamily 14 176 1.4E-17 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS33175 8e65748b5c3c46dd369029eb5e9b8bcc 187 Gene3D G3DSA:1.20.120.450 25 177 8.2E-14 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SMART SM00304 176 229 6.8E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SMART SM00387 361 472 4.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PANTHER PTHR24423:SF518 8 20 5.8E-43 T 23-04-2016 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PANTHER PTHR24423:SF518 230 468 5.8E-43 T 23-04-2016 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SUPERFAMILY SSF47384 237 310 4.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 Gene3D G3DSA:3.30.565.10 304 468 6.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 3.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SUPERFAMILY SSF55874 311 468 4.85E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SUPERFAMILY SSF158472 176 227 2.62E-6 T 23-04-2016 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 SMART SM00388 251 317 8.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 Pfam PF00672 HAMP domain 157 225 1.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 Pfam PF17152 Periplasmic sensor domain 40 138 1.3E-21 T 23-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 468 4.7E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 Gene3D G3DSA:1.10.287.130 245 303 1.7E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PANTHER PTHR24423 8 20 5.8E-43 T 23-04-2016 NIAKO_RS37000 8c696f2784b0b623496543d58de6e6b8 473 PANTHER PTHR24423 230 468 5.8E-43 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SUPERFAMILY SSF47384 366 447 1.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SUPERFAMILY SSF53822 19 291 1.47E-59 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 545 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 1.8E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:1.10.287.130 373 432 2.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:3.30.565.10 433 602 1.3E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Pfam PF00072 Response regulator receiver domain 655 765 3.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SMART SM00388 380 446 1.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SMART SM00448 653 765 3.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SMART SM00342 815 898 7.8E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SUPERFAMILY SSF46689 852 899 3.17E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SUPERFAMILY SSF55874 435 601 2.75E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:3.40.50.2300 14 135 1.2E-27 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:1.10.10.60 851 900 5.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 602 1.0E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SUPERFAMILY SSF52172 649 777 2.13E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Pfam PF13407 Periplasmic binding protein domain 21 273 7.1E-46 T 23-04-2016 IPR025997 Periplasmic binding protein NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 SMART SM00387 492 603 1.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 852 894 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PANTHER PTHR24423 359 807 4.2E-119 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PANTHER PTHR24423 9 28 4.2E-119 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Pfam PF12833 Helix-turn-helix domain 821 899 1.3E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:3.40.50.2300 648 778 2.2E-35 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 381 444 2.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PANTHER PTHR24423:SF487 359 807 4.2E-119 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 PANTHER PTHR24423:SF487 9 28 4.2E-119 T 23-04-2016 NIAKO_RS34880 72f55cc41cfb7bf0e6fadfcf21c3508f 900 Gene3D G3DSA:3.40.50.2300 136 283 1.0E-38 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Pfam PF00890 FAD binding domain 7 39 3.2E-5 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 SUPERFAMILY SSF51905 494 555 5.65E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 SUPERFAMILY SSF51905 2 65 5.65E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 SUPERFAMILY SSF51905 96 337 5.65E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Gene3D G3DSA:3.50.50.60 3 156 3.3E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Gene3D G3DSA:3.50.50.60 485 552 3.3E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Gene3D G3DSA:3.50.50.60 226 334 3.3E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Gene3D G3DSA:3.50.50.60 433 446 3.3E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 PANTHER PTHR11552 214 558 4.3E-50 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 PANTHER PTHR11552 7 188 4.3E-50 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Pfam PF00732 GMC oxidoreductase 67 310 1.2E-15 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 PANTHER PTHR11552:SF139 214 558 4.3E-50 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 PANTHER PTHR11552:SF139 7 188 4.3E-50 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 SUPERFAMILY SSF54373 348 495 3.65E-49 T 23-04-2016 NIAKO_RS30775 c8ccdd34cf2ccec58a0eb78d9e5e5952 559 Pfam PF05199 GMC oxidoreductase 423 546 1.4E-21 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 SUPERFAMILY SSF50249 6 116 8.91E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 29.027 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 Pfam PF00436 Single-strand binding protein family 6 108 1.5E-31 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 PANTHER PTHR10302 6 130 3.8E-35 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 Gene3D G3DSA:2.40.50.140 5 116 2.8E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07800 57eebbe6e74323ef58d52c876a8d3b4b 134 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 121 7.1E-33 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 Gene3D G3DSA:3.40.50.150 69 260 8.6E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 PANTHER PTHR34203 68 207 7.8E-13 T 23-04-2016 NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 SUPERFAMILY SSF53335 28 249 1.64E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 Pfam PF05050 Methyltransferase FkbM domain 82 248 1.2E-17 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 PANTHER PTHR34203:SF1 68 207 7.8E-13 T 23-04-2016 NIAKO_RS32180 01a0001ceb70ff08a351fcfa50c52135 266 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 80 226 1.0E-25 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 Gene3D G3DSA:3.90.1150.10 250 348 1.7E-23 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 PANTHER PTHR11751 7 345 4.2E-125 T 23-04-2016 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 347 4.0E-113 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 Gene3D G3DSA:3.40.640.10 48 249 2.0E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 SUPERFAMILY SSF53383 1 348 6.88E-72 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 Pfam PF00155 Aminotransferase class I and II 49 340 1.7E-57 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 349 54.866 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NIAKO_RS22040 5a0f9b0a182ec3298acb6c5e542d9a8f 351 PANTHER PTHR11751:SF424 7 345 4.2E-125 T 23-04-2016 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 SUPERFAMILY SSF88659 106 168 3.6E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 Pfam PF04542 Sigma-70 region 2 20 86 1.8E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 PANTHER PTHR30173:SF20 9 176 1.7E-30 T 23-04-2016 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 Gene3D G3DSA:1.10.1740.10 9 87 1.9E-20 T 23-04-2016 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 167 1.7E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 PANTHER PTHR30173 9 176 1.7E-30 T 23-04-2016 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 SUPERFAMILY SSF88946 10 93 2.86E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 Pfam PF08281 Sigma-70, region 4 117 163 3.0E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01150 c96cd3fb942c55f44294a4bfaa49b30a 179 Gene3D G3DSA:1.10.10.10 110 170 3.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Gene3D G3DSA:3.40.50.300 220 428 2.7E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Pfam PF00271 Helicase conserved C-terminal domain 705 809 1.5E-12 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 SUPERFAMILY SSF52540 673 855 2.19E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 SUPERFAMILY SSF52540 361 415 2.19E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 SMART SM00490 716 809 3.1E-12 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Gene3D G3DSA:3.30.870.10 88 180 6.3E-5 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 SMART SM00487 227 454 9.6E-9 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799 653 878 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799 606 619 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799 250 510 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Pfam PF13091 PLD-like domain 20 178 4.3E-14 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799:SF576 653 878 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799:SF576 606 619 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 PANTHER PTHR10799:SF576 250 510 2.9E-26 T 23-04-2016 NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Gene3D G3DSA:3.40.50.300 679 832 7.6E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 SUPERFAMILY SSF52540 194 432 6.69E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19590 9d6c2a169ba385b167bcc29f90545eb6 917 Pfam PF00176 SNF2 family N-terminal domain 255 430 1.3E-11 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4184 4199 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3150 3165 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 1290 1558 3.89E-55 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 2339 2607 3.89E-55 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00455 Putative AMP-binding domain signature. 659 670 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2763 2774 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1714 1725 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3798 3809 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4832 4843 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 668 829 1.7E-41 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 2773 2927 2.5E-30 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 1724 1878 2.5E-30 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 4841 4993 9.7E-28 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 3808 3963 1.1E-33 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SMART SM00823 Phosphopantetheine attachment site 1026 1097 0.0022 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SMART SM00823 Phosphopantetheine attachment site 3124 3195 0.055 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SMART SM00823 Phosphopantetheine attachment site 5184 5255 0.088 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SMART SM00823 Phosphopantetheine attachment site 2075 2146 0.0021 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF56801 2579 3137 5.76E-149 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF47336 3116 3223 2.36E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00668 Condensation domain 3207 3499 1.2E-81 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00668 Condensation domain 1110 1400 1.9E-82 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00668 Condensation domain 4242 4533 5.0E-77 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00668 Condensation domain 71 363 2.2E-81 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00668 Condensation domain 2159 2449 8.1E-80 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:2.30.38.10 4994 5071 1.7E-24 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:2.30.38.10 3964 4040 5.2E-29 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:2.30.38.10 830 906 3.6E-28 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:2.30.38.10 1879 1955 2.8E-28 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:2.30.38.10 2928 3004 5.2E-28 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 522 667 2.0E-49 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 3661 3807 4.4E-51 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 4696 4840 7.3E-55 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 2614 2772 2.1E-49 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.40.50.980 1565 1723 1.0E-49 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13193 AMP-binding enzyme C-terminal domain 4059 4132 3.9E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13193 AMP-binding enzyme C-terminal domain 3023 3096 1.8E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13193 AMP-binding enzyme C-terminal domain 1974 2047 4.8E-9 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13193 AMP-binding enzyme C-terminal domain 925 998 2.9E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 252 499 3.11E-53 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3690 4075 3.3E-121 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1593 1990 2.6E-125 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 551 941 1.8E-126 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4724 5105 1.3E-111 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2642 3039 1.8E-125 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 1108 1302 3.45E-48 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF56801 3627 4172 3.53E-147 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF47336 5176 5249 7.85E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 4239 4434 1.33E-43 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 3213 3381 6.67E-43 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 2157 2351 9.89E-45 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:1.10.1200.10 3127 3194 2.2E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:1.10.1200.10 1029 1097 6.3E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:1.10.1200.10 4164 4228 2.0E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:1.10.1200.10 2078 2146 1.2E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:1.10.1200.10 5185 5252 3.0E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 68 264 5.34E-47 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF47336 2068 2139 1.25E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF56801 1530 2088 1.7E-147 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF56801 488 1039 5.49E-159 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 3388 3654 2.11E-58 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF52777 4422 4666 5.56E-52 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 PANTHER PTHR24095:SF137 2136 4132 0.0 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 PANTHER PTHR24095:SF137 690 1189 0.0 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF56801 4666 5196 4.71E-137 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF47336 4152 4222 4.45E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 PANTHER PTHR24095 2136 4132 0.0 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 PANTHER PTHR24095 690 1189 0.0 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.30.300.30 4046 4163 2.9E-38 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.30.300.30 1961 2077 4.1E-38 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.30.300.30 912 1028 1.2E-39 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.30.300.30 5076 5184 2.6E-33 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Gene3D G3DSA:3.30.300.30 3010 3126 4.4E-40 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13745 HxxPF-repeated domain 4556 4649 7.3E-21 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13745 HxxPF-repeated domain 386 476 8.5E-22 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13745 HxxPF-repeated domain 3523 3614 7.7E-15 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13745 HxxPF-repeated domain 1423 1515 6.2E-20 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF13745 HxxPF-repeated domain 2472 2564 6.2E-20 T 23-04-2016 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00550 Phosphopantetheine attachment site 2077 2139 7.6E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00550 Phosphopantetheine attachment site 1027 1090 1.6E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00550 Phosphopantetheine attachment site 3126 3188 6.2E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00550 Phosphopantetheine attachment site 5187 5250 3.6E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00550 Phosphopantetheine attachment site 4162 4222 2.7E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 SUPERFAMILY SSF47336 1018 1090 5.04E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00501 AMP-binding enzyme 3669 4051 2.1E-94 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00501 AMP-binding enzyme 4703 5081 5.4E-85 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00501 AMP-binding enzyme 1572 1966 1.5E-89 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00501 AMP-binding enzyme 2621 3015 4.3E-89 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11520 f7f2295da7b72c21be4a78840a3755b9 5259 Pfam PF00501 AMP-binding enzyme 530 917 1.4E-96 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 SUPERFAMILY SSF52172 3 126 9.39E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 SMART SM00448 3 111 5.7E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 Gene3D G3DSA:2.40.50.40 133 200 1.1E-20 T 23-04-2016 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 Pfam PF04397 LytTr DNA-binding domain 143 230 1.8E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 Gene3D G3DSA:3.40.50.2300 2 116 2.5E-23 T 23-04-2016 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 PANTHER PTHR26402 3 114 6.1E-23 T 23-04-2016 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 Pfam PF00072 Response regulator receiver domain 6 111 1.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01350 73a1b2fd76e31dd896d263910b5dcdc9 236 SMART SM00850 142 232 1.8E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS10275 86fa22b12fe7e22865102284c9096b6b 175 Pfam PF12867 DinB superfamily 12 149 1.6E-13 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS10275 86fa22b12fe7e22865102284c9096b6b 175 Gene3D G3DSA:1.20.120.450 2 168 4.3E-38 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS10275 86fa22b12fe7e22865102284c9096b6b 175 SUPERFAMILY SSF109854 5 153 5.04E-28 T 23-04-2016 NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 PANTHER PTHR30231:SF9 2 251 1.4E-84 T 23-04-2016 NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 SUPERFAMILY SSF53098 5 175 1.21E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 Gene3D G3DSA:3.30.420.10 6 174 3.4E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 SMART SM00479 7 173 1.3E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 PANTHER PTHR30231 2 251 1.4E-84 T 23-04-2016 NIAKO_RS21680 b3af894cb489c3e0b48d143adaef0888 256 Pfam PF00929 Exonuclease 10 163 1.0E-21 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS13220 a76a412a9a0749d5e32861ebf95412c9 261 PANTHER PTHR30502:SF0 3 261 5.4E-77 T 23-04-2016 NIAKO_RS13220 a76a412a9a0749d5e32861ebf95412c9 261 SUPERFAMILY SSF51621 2 250 5.23E-71 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS13220 a76a412a9a0749d5e32861ebf95412c9 261 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 240 7.0E-39 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 NIAKO_RS13220 a76a412a9a0749d5e32861ebf95412c9 261 Gene3D G3DSA:3.20.20.60 2 249 1.5E-68 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS13220 a76a412a9a0749d5e32861ebf95412c9 261 PANTHER PTHR30502 3 261 5.4E-77 T 23-04-2016 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 313 3.1E-13 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 146 161 3.1E-13 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 194 209 3.1E-13 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 329 3.1E-13 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PANTHER PTHR11533 20 504 1.3E-74 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 PANTHER PTHR11533:SF185 20 504 1.3E-74 T 23-04-2016 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 Gene3D G3DSA:1.10.390.10 313 454 2.4E-30 T 23-04-2016 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 SUPERFAMILY SSF63737 18 210 2.48E-22 T 23-04-2016 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 Pfam PF01433 Peptidase family M1 26 386 5.4E-50 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS27315 ec54917674a6154ead129b6fcaade300 531 SUPERFAMILY SSF55486 220 451 4.58E-57 T 23-04-2016 NIAKO_RS16030 04435ae92fefe645b29cf245e480f900 372 Pfam PF01594 Domain of unknown function DUF20 17 334 7.3E-53 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS16030 04435ae92fefe645b29cf245e480f900 372 PANTHER PTHR21716 15 352 2.6E-51 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 PANTHER PTHR11659 4 483 1.1E-221 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 Pfam PF02934 GatB/GatE catalytic domain 10 293 1.0E-110 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 PANTHER PTHR11659:SF0 4 483 1.1E-221 T 23-04-2016 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 Pfam PF02637 GatB domain 334 482 3.2E-35 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 7 482 3.8E-161 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 SMART SM00845 333 482 6.5E-45 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 SUPERFAMILY SSF89095 303 406 1.7E-23 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 7 483 35.038 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NIAKO_RS28235 af56d1883a9e90166ba46367898d0c1d 483 SUPERFAMILY SSF55931 9 301 5.04E-115 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 SUPERFAMILY SSF55620 5 134 4.18E-40 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 Pfam PF01014 Uricase 141 275 2.3E-32 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 Pfam PF01014 Uricase 9 132 3.4E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 ProDom PD003367 URICASE OXIDOREDUCTASE URATE OXIDASE METABOLISM PURINE PEROXISOME ACETYLATION II DIRECT 178 280 6.0E-27 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PRINTS PR00093 Uricase signature 148 164 2.7E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PRINTS PR00093 Uricase signature 11 22 2.7E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PRINTS PR00093 Uricase signature 86 99 2.7E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PRINTS PR00093 Uricase signature 164 176 2.7E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PRINTS PR00093 Uricase signature 50 64 2.7E-20 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PIRSF PIRSF000241 1 281 1.6E-96 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 Gene3D G3DSA:3.10.270.10 2 281 3.2E-99 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 SUPERFAMILY SSF55620 139 281 1.3E-52 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 TIGRFAM TIGR03383 urate_oxi: urate oxidase 5 280 1.2E-100 T 23-04-2016 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691|UniPathway: UPA00394 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PANTHER PTHR10395 1 160 1.1E-84 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PANTHER PTHR10395 196 281 1.1E-84 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PANTHER PTHR10395:SF13 1 160 1.1E-84 T 23-04-2016 NIAKO_RS02170 ecf54b92f2f50de8ae1e28a011f66343 281 PANTHER PTHR10395:SF13 196 281 1.1E-84 T 23-04-2016 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PANTHER PTHR11353 1 529 5.3E-186 T 23-04-2016 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 Gene3D G3DSA:1.10.560.10 366 518 2.6E-36 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 Gene3D G3DSA:1.10.560.10 3 187 3.0E-31 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 1.0E-223 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 SUPERFAMILY SSF52029 184 376 6.43E-80 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PRINTS PR00298 60kDa chaperonin signature 350 375 2.2E-67 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PRINTS PR00298 60kDa chaperonin signature 268 291 2.2E-67 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-67 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PRINTS PR00298 60kDa chaperonin signature 398 419 2.2E-67 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-67 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 SUPERFAMILY SSF54849 141 204 1.85E-19 T 23-04-2016 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 SUPERFAMILY SSF48592 6 133 3.58E-61 T 23-04-2016 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 SUPERFAMILY SSF48592 406 521 3.58E-61 T 23-04-2016 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 540 36.593 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 3.8E-88 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NIAKO_RS11330 cacdb6f4197d5dbb812eb65ae7a70b81 540 Gene3D G3DSA:3.50.7.10 188 365 2.4E-94 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 Hamap MF_00206 Lipoyl synthase [lipA]. 1 301 132.722 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 PIRSF PIRSF005963 2 312 8.1E-131 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 15 54 8.1E-7 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 SMART SM00729 65 268 4.8E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 PANTHER PTHR10949 1 288 2.2E-154 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 Gene3D G3DSA:3.20.20.70 33 291 5.6E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 TIGRFAM TIGR00510 lipA: lipoyl synthase 8 293 5.6E-113 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 SUPERFAMILY SSF102114 29 297 2.75E-63 T 23-04-2016 NIAKO_RS10620 0383770cb7f34638e240c1caf4fd7146 312 Pfam PF04055 Radical SAM superfamily 71 229 3.2E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 Gene3D G3DSA:3.40.50.1360 5 141 4.4E-58 T 23-04-2016 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 224 32.901 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 52 220 1.4E-64 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 221 2.3E-81 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 SUPERFAMILY SSF100950 3 150 1.19E-47 T 23-04-2016 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 SUPERFAMILY SSF75445 129 207 1.31E-22 T 23-04-2016 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 Gene3D G3DSA:3.30.70.260 142 204 1.1E-26 T 23-04-2016 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 PANTHER PTHR11934 1 220 2.6E-100 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS26115 184523705f653e0caf31095532c0e78f 227 SMART SM01134 2 140 0.0072 T 23-04-2016 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 PRINTS PR01713 Nucleotide sugar epimerase signature 289 306 8.6E-7 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 PRINTS PR01713 Nucleotide sugar epimerase signature 250 265 8.6E-7 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 PRINTS PR01713 Nucleotide sugar epimerase signature 226 241 8.6E-7 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 Gene3D G3DSA:3.90.25.10 190 312 1.5E-34 T 23-04-2016 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 PANTHER PTHR10366:SF472 15 325 6.4E-113 T 23-04-2016 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 Gene3D G3DSA:3.40.50.720 10 189 1.8E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 SUPERFAMILY SSF51735 5 325 4.72E-91 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 PANTHER PTHR10366 15 325 6.4E-113 T 23-04-2016 NIAKO_RS26335 0cb0263f9f3d2dfabf7139e5376d690d 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 256 7.8E-54 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS35615 48aca9d28fe8e9a78017eecd904d8a8c 405 PANTHER PTHR32328 38 120 5.5E-21 T 23-04-2016 NIAKO_RS35615 48aca9d28fe8e9a78017eecd904d8a8c 405 PANTHER PTHR32328 139 405 5.5E-21 T 23-04-2016 NIAKO_RS35615 48aca9d28fe8e9a78017eecd904d8a8c 405 SUPERFAMILY SSF53383 56 398 8.57E-31 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS35615 48aca9d28fe8e9a78017eecd904d8a8c 405 Gene3D G3DSA:3.40.640.10 83 298 2.0E-18 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS35615 48aca9d28fe8e9a78017eecd904d8a8c 405 Pfam PF03841 L-seryl-tRNA selenium transferase 159 301 1.4E-5 T 23-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 SUPERFAMILY SSF46689 211 248 1.12E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 PANTHER PTHR11019 150 246 1.2E-17 T 23-04-2016 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 SMART SM00342 166 248 3.9E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 Gene3D G3DSA:1.10.10.60 213 246 5.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 SUPERFAMILY SSF46689 149 199 1.74E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 Gene3D G3DSA:1.10.10.60 145 200 6.8E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 PANTHER PTHR11019:SF75 150 246 1.2E-17 T 23-04-2016 NIAKO_RS15495 20d8b00a509309ef56f32da325ad267c 251 Pfam PF12833 Helix-turn-helix domain 172 249 8.5E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16935 710a68d73d3bb9c28de6ca27ac0ddc70 90 Gene3D G3DSA:3.10.20.30 4 87 2.3E-15 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS16935 710a68d73d3bb9c28de6ca27ac0ddc70 90 PANTHER PTHR38031:SF1 1 90 2.1E-13 T 23-04-2016 NIAKO_RS16935 710a68d73d3bb9c28de6ca27ac0ddc70 90 SUPERFAMILY SSF54285 3 90 8.72E-13 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NIAKO_RS16935 710a68d73d3bb9c28de6ca27ac0ddc70 90 Pfam PF02597 ThiS family 18 90 9.4E-7 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NIAKO_RS16935 710a68d73d3bb9c28de6ca27ac0ddc70 90 PANTHER PTHR38031 1 90 2.1E-13 T 23-04-2016 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 SUPERFAMILY SSF81296 9 97 7.52E-18 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357 494 601 1.1E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 SUPERFAMILY SSF51445 94 515 4.23E-107 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357:SF110 14 319 1.1E-98 T 23-04-2016 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 SMART SM00642 92 461 1.1E-18 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Pfam PF11941 Domain of unknown function (DUF3459) 501 583 2.9E-7 T 23-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357 340 468 1.1E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Gene3D G3DSA:3.20.20.80 484 515 3.3E-84 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Gene3D G3DSA:3.20.20.80 111 442 3.3E-84 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PIRSF PIRSF006337 4 582 6.1E-216 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357 14 319 1.1E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Pfam PF00128 Alpha amylase, catalytic domain 127 223 1.0E-22 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Pfam PF00128 Alpha amylase, catalytic domain 240 440 4.5E-7 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 18 558 3.9E-214 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357:SF110 494 601 1.1E-98 T 23-04-2016 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 PANTHER PTHR10357:SF110 340 468 1.1E-98 T 23-04-2016 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 9 72 7.5E-6 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS15350 bf4e16e6e17982aa172e8656f94e0401 610 Gene3D G3DSA:2.60.40.10 11 95 1.7E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS08180 9643a624ba5dac6f6026ab255560ba33 150 Gene3D G3DSA:3.40.630.30 16 149 5.6E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS08180 9643a624ba5dac6f6026ab255560ba33 150 Pfam PF00583 Acetyltransferase (GNAT) family 52 128 1.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS08180 9643a624ba5dac6f6026ab255560ba33 150 PANTHER PTHR13947 52 134 1.6E-19 T 23-04-2016 NIAKO_RS08180 9643a624ba5dac6f6026ab255560ba33 150 SUPERFAMILY SSF55729 12 149 5.24E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS13780 335a670eb3251531ba8e9af47edc3a97 308 Pfam PF16694 Cytochrome P460 174 296 3.1E-33 T 23-04-2016 IPR032033 Cytochrome P460 NIAKO_RS13780 335a670eb3251531ba8e9af47edc3a97 308 SMART SM01235 13 142 3.4E-40 T 23-04-2016 IPR025992 Haem-binding domain NIAKO_RS13780 335a670eb3251531ba8e9af47edc3a97 308 Pfam PF14376 Haem-binding domain 15 138 6.3E-34 T 23-04-2016 IPR025992 Haem-binding domain NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 Gene3D G3DSA:1.10.760.10 406 498 2.4E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 Pfam PF00034 Cytochrome c 413 497 1.8E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 SUPERFAMILY SSF50952 39 369 1.2E-24 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 PANTHER PTHR19328 41 265 5.8E-28 T 23-04-2016 NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 Gene3D G3DSA:2.120.10.30 37 392 1.3E-71 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 SUPERFAMILY SSF46626 408 497 1.14E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS18575 a0d6848a02f2c271a393d69d02d548ef 518 Pfam PF07995 Glucose / Sorbosone dehydrogenase 49 369 3.2E-61 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 PANTHER PTHR10992:SF785 184 275 2.0E-25 T 23-04-2016 NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 PANTHER PTHR10992:SF785 36 166 2.0E-25 T 23-04-2016 NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 SUPERFAMILY SSF53474 33 271 3.59E-27 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 Pfam PF12697 Alpha/beta hydrolase family 36 266 1.6E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 Gene3D G3DSA:3.40.50.1820 34 273 1.0E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 PANTHER PTHR10992 184 275 2.0E-25 T 23-04-2016 NIAKO_RS08555 92c6cf7001399790b9d0cd483168e59c 277 PANTHER PTHR10992 36 166 2.0E-25 T 23-04-2016 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Pfam PF14310 Fibronectin type III-like domain 697 768 6.6E-21 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 SUPERFAMILY SSF51445 55 384 1.16E-90 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Gene3D G3DSA:3.20.20.300 55 357 6.2E-98 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620:SF18 55 446 7.3E-250 T 23-04-2016 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620:SF18 472 616 7.3E-250 T 23-04-2016 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620:SF18 634 782 7.3E-250 T 23-04-2016 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 285 302 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620 55 446 7.3E-250 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620 472 616 7.3E-250 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PANTHER PTHR30620 634 782 7.3E-250 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Gene3D G3DSA:3.40.50.1700 371 448 4.0E-55 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Gene3D G3DSA:3.40.50.1700 485 604 4.0E-55 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Gene3D G3DSA:3.40.50.1700 643 661 4.0E-55 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 101 352 9.6E-51 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 SMART SM01217 697 768 3.5E-22 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 SUPERFAMILY SSF52279 385 454 4.32E-44 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 SUPERFAMILY SSF52279 643 665 4.32E-44 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 SUPERFAMILY SSF52279 488 604 4.32E-44 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 385 646 8.2E-43 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 285 303 1.2E-33 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 215 231 1.2E-33 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 105 121 1.2E-33 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 138 157 1.2E-33 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS04035 eb27b6fc940a502e6b9419eb7183e82b 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 1.2E-33 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 SUPERFAMILY SSF88659 120 173 6.17E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 PANTHER PTHR30173 1 171 5.1E-42 T 23-04-2016 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 Pfam PF04542 Sigma-70 region 2 21 88 3.3E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 Pfam PF08281 Sigma-70, region 4 116 167 4.7E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 Gene3D G3DSA:1.10.1740.10 1 95 6.7E-29 T 23-04-2016 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 169 2.0E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 SUPERFAMILY SSF88946 2 98 1.15E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 PANTHER PTHR30173:SF21 1 171 5.1E-42 T 23-04-2016 NIAKO_RS33780 1180e1b6561cae54a949f12c5684fa2e 193 Gene3D G3DSA:1.10.10.10 114 171 5.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 PANTHER PTHR11019 13 281 2.1E-41 T 23-04-2016 NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 Pfam PF12833 Helix-turn-helix domain 200 278 1.4E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 SMART SM00342 194 277 4.7E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 Gene3D G3DSA:1.10.10.60 234 279 2.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 SUPERFAMILY SSF46689 234 279 4.12E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01265 635853d88d256c9384f0f8e8b0ebcc03 283 PANTHER PTHR11019:SF45 13 281 2.1E-41 T 23-04-2016 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 114 136 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 23 45 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 165 182 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 71 88 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 89 106 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PRINTS PR00775 90kDa heat shock protein signature 183 201 8.1E-36 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 Pfam PF00183 Hsp90 protein 207 593 5.1E-47 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 SUPERFAMILY SSF55874 1 207 4.71E-58 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 Gene3D G3DSA:3.30.565.10 2 226 1.3E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 150 6.8E-13 T 23-04-2016 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PIRSF PIRSF002583 1 620 4.8E-153 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 SUPERFAMILY SSF54211 218 474 6.37E-61 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PANTHER PTHR11528 7 598 1.8E-146 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NIAKO_RS25155 61b2b22081f0aa6138e0287642f37123 623 PANTHER PTHR11528:SF44 7 598 1.8E-146 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 1 1001 3.8E-223 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532:SF57 368 413 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532:SF57 469 495 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532:SF57 530 964 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532 530 964 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Gene3D G3DSA:2.40.170.20 296 757 1.6E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Gene3D G3DSA:2.40.170.20 196 221 1.6E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Gene3D G3DSA:2.40.170.20 826 1000 1.6E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532:SF57 981 999 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 171 201 1.6E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Pfam PF07715 TonB-dependent Receptor Plug Domain 90 195 2.1E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF49464 1 79 3.92E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Pfam PF13715 CarboxypepD_reg-like domain 1 82 8.4E-15 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532 981 999 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Gene3D G3DSA:2.60.40.1120 1 84 2.9E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 Gene3D G3DSA:2.170.130.10 85 195 1.2E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF56935 287 375 2.24E-79 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF56935 404 745 2.24E-79 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF56935 817 861 2.24E-79 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF56935 79 221 2.24E-79 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 SUPERFAMILY SSF56935 899 963 2.24E-79 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532:SF57 1 341 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532 469 495 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532 1 341 6.6E-198 T 23-04-2016 NIAKO_RS12240 46f0a8ef0a935b5e77ab180426f960e9 1001 PANTHER PTHR11532 368 413 6.6E-198 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 330 552 1.2E-88 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 SUPERFAMILY SSF52777 329 552 8.01E-85 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Pfam PF00364 Biotin-requiring enzyme 132 204 4.6E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Pfam PF00364 Biotin-requiring enzyme 4 76 2.4E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 SUPERFAMILY SSF51230 2 86 1.83E-25 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 SUPERFAMILY SSF51230 129 209 9.68E-25 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 133 553 5.1E-146 T 23-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Pfam PF02817 e3 binding domain 263 297 2.4E-14 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 SUPERFAMILY SSF47005 257 301 9.42E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 PANTHER PTHR23151:SF9 23 552 1.2E-206 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 155 184 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 PANTHER PTHR23151 23 552 1.2E-206 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Gene3D G3DSA:4.10.320.10 254 301 1.2E-18 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Gene3D G3DSA:2.40.50.100 128 209 1.2E-28 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Gene3D G3DSA:2.40.50.100 2 86 2.2E-29 T 23-04-2016 NIAKO_RS27175 8ef26a43e4ece258b603aca096054cf0 553 Gene3D G3DSA:3.30.559.10 321 552 7.0E-91 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NIAKO_RS05740 c96180fa12fc868114d4aa2a17a71a47 173 Pfam PF00156 Phosphoribosyl transferase domain 3 151 1.7E-19 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS05740 c96180fa12fc868114d4aa2a17a71a47 173 Gene3D G3DSA:3.40.50.2020 2 167 7.6E-39 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS05740 c96180fa12fc868114d4aa2a17a71a47 173 SUPERFAMILY SSF53271 2 167 2.1E-33 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS05740 c96180fa12fc868114d4aa2a17a71a47 173 PANTHER PTHR11608 1 173 9.8E-57 T 23-04-2016 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 270 2.0E-50 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 Gene3D G3DSA:3.40.140.10 134 271 5.8E-52 T 23-04-2016 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 PANTHER PTHR30592:SF1 2 270 2.3E-84 T 23-04-2016 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 Gene3D G3DSA:3.10.20.10 28 118 5.9E-21 T 23-04-2016 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 SUPERFAMILY SSF53927 7 270 5.72E-73 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 Hamap MF_00187 Protein FdhD [fdhD]. 3 271 33.344 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 PANTHER PTHR30592 2 270 2.3E-84 T 23-04-2016 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 PIRSF PIRSF015626 2 273 1.7E-81 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 NIAKO_RS03450 aca0c4705514d13414f809310b02fbe3 273 Pfam PF02634 FdhD/NarQ family 27 270 3.1E-74 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 PANTHER PTHR11825:SF2 12 353 1.0E-112 T 23-04-2016 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 Gene3D G3DSA:3.20.10.10 172 339 1.2E-55 T 23-04-2016 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 Gene3D G3DSA:3.30.470.10 4 171 1.3E-59 T 23-04-2016 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 45 354 7.3E-101 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 SUPERFAMILY SSF56752 10 351 5.89E-95 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 Pfam PF01063 Amino-transferase class IV 71 311 2.6E-30 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 PANTHER PTHR11825 12 353 1.0E-112 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 PIRSF PIRSF006468 3 354 6.0E-109 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NIAKO_RS23070 4f25b356c08348b18acd98b7c2940f5b 354 ProSitePatterns PS00770 Aminotransferases class-IV signature. 231 261 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Pfam PF00391 PEP-utilising enzyme, mobile domain 285 356 1.1E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 2 239 1.0E-82 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 381 689 5.0E-62 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 596 614 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 SUPERFAMILY SSF52009 254 367 4.97E-31 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Gene3D G3DSA:3.20.20.60 382 691 1.4E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 692 8.9E-302 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 PANTHER PTHR22931:SF7 7 700 0.0 T 23-04-2016 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Gene3D G3DSA:3.30.1490.20 2 85 2.3E-33 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Gene3D G3DSA:3.50.30.10 278 369 1.8E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 315 326 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 Gene3D G3DSA:3.30.470.20 88 243 8.0E-48 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 PANTHER PTHR22931 7 700 0.0 T 23-04-2016 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 649 661 2.1E-5 T 23-04-2016 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.1E-5 T 23-04-2016 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 596 611 2.1E-5 T 23-04-2016 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 SUPERFAMILY SSF51621 366 695 5.23E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS18900 e0d93502a3f9ce4f0ef48c61ea18e586 702 SUPERFAMILY SSF56059 7 272 5.89E-70 T 23-04-2016 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PANTHER PTHR24422:SF11 1 257 4.0E-105 T 23-04-2016 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 Gene3D G3DSA:1.10.155.10 1 70 6.0E-20 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.5E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 55 1.1E-14 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PANTHER PTHR24422 1 257 4.0E-105 T 23-04-2016 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 SUPERFAMILY SSF47757 1 71 1.96E-15 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 SMART SM00138 3 270 7.5E-91 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 PIRSF PIRSF000410 1 271 2.2E-96 T 23-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 SUPERFAMILY SSF53335 72 267 5.52E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 Gene3D G3DSA:3.40.50.150 71 268 3.4E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS01230 69efdc558bfabd91e157b26776ec8053 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 262 1.1E-62 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 PANTHER PTHR10362 10 491 1.3E-211 T 23-04-2016 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 Gene3D G3DSA:1.20.200.10 199 502 1.9E-114 T 23-04-2016 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 Gene3D G3DSA:1.10.275.10 8 198 5.3E-63 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 140 156 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 SUPERFAMILY SSF48557 5 500 1.65E-177 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 12 501 1.0E-179 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 PANTHER PTHR10362:SF7 10 491 1.3E-211 T 23-04-2016 NIAKO_RS10845 3729c29735d1c6317d60922308ac113c 520 Pfam PF00221 Aromatic amino acid lyase 12 469 1.0E-179 T 23-04-2016 IPR001106 Aromatic amino acid lyase NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 Pfam PF14310 Fibronectin type III-like domain 669 739 2.9E-27 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 SMART SM01217 669 739 1.5E-34 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 126 145 5.2E-32 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 172 188 5.2E-32 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 5.2E-32 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 89 105 5.2E-32 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 5.2E-32 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 Gene3D G3DSA:3.20.20.300 53 358 1.3E-97 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PANTHER PTHR30620:SF18 57 751 7.1E-271 T 23-04-2016 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 PANTHER PTHR30620 57 751 7.1E-271 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 SUPERFAMILY SSF51445 53 379 9.69E-91 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 632 9.9E-56 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 Gene3D G3DSA:3.40.50.1700 366 635 1.7E-71 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 SUPERFAMILY SSF52279 381 635 8.63E-56 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS11775 b7b0efd70eeb318cdea269b3ad2a3357 751 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 89 346 4.9E-49 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS20890 5db683e312574ea08ce480f533c809b4 228 Pfam PF07077 Protein of unknown function (DUF1345) 40 217 8.6E-60 T 23-04-2016 IPR009781 Protein of unknown function DUF1345 NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 SUPERFAMILY SSF52540 1 221 1.9E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 Hamap MF_00238 Cytidylate kinase [cmk]. 5 225 30.781 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 Pfam PF02224 Cytidylate kinase 7 219 2.1E-66 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 Gene3D G3DSA:3.40.50.300 4 222 9.0E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 PANTHER PTHR21299 6 225 1.2E-61 T 23-04-2016 NIAKO_RS23205 59b57ee85d49e9d9253645fada2ace74 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 216 1.7E-71 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 PANTHER PTHR30173 1 197 1.6E-49 T 23-04-2016 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 SUPERFAMILY SSF88946 7 102 7.06E-27 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 176 9.1E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 176 2.8E-44 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 Gene3D G3DSA:1.10.10.10 117 179 2.6E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 Pfam PF04542 Sigma-70 region 2 25 92 2.0E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 Gene3D G3DSA:1.10.1740.10 7 110 4.4E-29 T 23-04-2016 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 Pfam PF08281 Sigma-70, region 4 122 172 1.9E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19710 8c1255a1301952b6cd1a9228939c621a 197 SUPERFAMILY SSF88659 108 182 3.71E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 PANTHER PTHR11019 231 339 5.0E-24 T 23-04-2016 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 SMART SM00342 249 332 5.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 PANTHER PTHR11019:SF61 231 339 5.0E-24 T 23-04-2016 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 Pfam PF12833 Helix-turn-helix domain 255 331 1.2E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 Gene3D G3DSA:1.10.10.60 229 286 2.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 SUPERFAMILY SSF46689 286 334 1.57E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 Gene3D G3DSA:1.10.10.60 287 334 3.7E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37290 5af28e69c8eb3e484a5595f79ae2f59c 340 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 286 328 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08845 061c87d45f93bc400c080946ae5ff3a3 463 SUPERFAMILY SSF48452 278 434 7.49E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08845 061c87d45f93bc400c080946ae5ff3a3 463 Gene3D G3DSA:1.25.40.10 115 172 5.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08845 061c87d45f93bc400c080946ae5ff3a3 463 Gene3D G3DSA:1.25.40.10 286 442 5.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 PANTHER PTHR34606 3 218 1.1E-52 T 23-04-2016 NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 SMART SM00749 83 146 0.018 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 SMART SM00749 8 71 0.59 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 SMART SM00749 154 217 0.0029 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 Pfam PF04972 BON domain 3 69 6.2E-16 T 23-04-2016 IPR007055 BON domain NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 Pfam PF04972 BON domain 79 146 2.9E-19 T 23-04-2016 IPR007055 BON domain NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 Pfam PF04972 BON domain 151 215 3.1E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS11220 193a915f9b393a68fe64072158f498de 221 PANTHER PTHR34606:SF2 3 218 1.1E-52 T 23-04-2016 NIAKO_RS05635 af5d1acce28944b208220dfd8b0701c6 229 SMART SM00849 7 191 8.2E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS05635 af5d1acce28944b208220dfd8b0701c6 229 Gene3D G3DSA:3.60.15.10 1 228 6.7E-53 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS05635 af5d1acce28944b208220dfd8b0701c6 229 PANTHER PTHR15032 1 195 8.1E-44 T 23-04-2016 NIAKO_RS05635 af5d1acce28944b208220dfd8b0701c6 229 Pfam PF12706 Beta-lactamase superfamily domain 19 192 9.7E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS05635 af5d1acce28944b208220dfd8b0701c6 229 SUPERFAMILY SSF56281 1 226 8.91E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 PANTHER PTHR32494 8 417 1.1E-143 T 23-04-2016 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 Pfam PF01546 Peptidase family M20/M25/M40 80 408 6.0E-26 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 Pfam PF07687 Peptidase dimerisation domain 215 307 2.0E-6 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 SUPERFAMILY SSF55031 215 326 1.41E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 SUPERFAMILY SSF53187 10 225 1.37E-74 T 23-04-2016 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 SUPERFAMILY SSF53187 338 411 1.37E-74 T 23-04-2016 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 PIRSF PIRSF001235 5 415 2.3E-121 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 13 406 1.4E-104 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 Gene3D G3DSA:3.40.630.10 10 227 8.1E-91 T 23-04-2016 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 Gene3D G3DSA:3.40.630.10 353 412 8.1E-91 T 23-04-2016 NIAKO_RS02160 9092974c723f3e622ef0b2dfcdcfd119 417 Gene3D G3DSA:3.30.70.360 228 326 1.4E-33 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Gene3D G3DSA:2.170.130.10 125 237 1.9E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Pfam PF13715 CarboxypepD_reg-like domain 40 121 6.6E-11 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532:SF57 848 1063 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532:SF57 492 812 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532:SF57 16 418 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 237 2.9E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 40 1065 1.9E-235 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Gene3D G3DSA:2.60.40.1120 39 124 4.8E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532 848 1063 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532 492 812 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 PANTHER PTHR11532 16 418 4.0E-219 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Pfam PF00593 TonB dependent receptor 595 969 4.6E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 213 243 6.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 SUPERFAMILY SSF49464 39 119 9.68E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Gene3D G3DSA:2.40.170.20 899 1063 1.5E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Gene3D G3DSA:2.40.170.20 238 263 1.5E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 Gene3D G3DSA:2.40.170.20 316 773 1.5E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 SUPERFAMILY SSF56935 890 934 1.6E-79 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 SUPERFAMILY SSF56935 307 762 1.6E-79 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 SUPERFAMILY SSF56935 974 1063 1.6E-79 T 23-04-2016 NIAKO_RS19690 1c42f8ef7f326108a4f967e935b99116 1065 SUPERFAMILY SSF56935 117 261 1.6E-79 T 23-04-2016 NIAKO_RS16520 bc954b9fdc3899bd48aa5edb63834c82 502 Pfam PF14322 Starch-binding associating with outer membrane 32 215 2.6E-18 T 23-04-2016 NIAKO_RS16520 bc954b9fdc3899bd48aa5edb63834c82 502 Pfam PF07980 SusD family 223 502 3.7E-32 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS16520 bc954b9fdc3899bd48aa5edb63834c82 502 Gene3D G3DSA:1.25.40.10 360 443 4.3E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16520 bc954b9fdc3899bd48aa5edb63834c82 502 Gene3D G3DSA:1.25.40.10 196 310 4.3E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16520 bc954b9fdc3899bd48aa5edb63834c82 502 SUPERFAMILY SSF48452 11 502 3.54E-115 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Gene3D G3DSA:1.10.1160.10 260 361 6.6E-31 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PANTHER PTHR11451 4 255 6.1E-98 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PANTHER PTHR11451 289 393 6.1E-98 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Gene3D G3DSA:1.10.10.350 410 508 2.8E-22 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 507 3.0E-145 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PRINTS PR00987 Glutamyl-tRNA synthetase signature 218 226 2.0E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 212 2.0E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.0E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.0E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.0E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Gene3D G3DSA:3.90.800.10 70 203 7.1E-36 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 352 6.3E-90 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Gene3D G3DSA:3.40.50.620 204 255 1.2E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Gene3D G3DSA:3.40.50.620 4 69 1.2E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PANTHER PTHR11451:SF41 4 255 6.1E-98 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 PANTHER PTHR11451:SF41 289 393 6.1E-98 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 508 31.414 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 SUPERFAMILY SSF48163 346 508 1.57E-34 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 SUPERFAMILY SSF52374 4 344 1.64E-101 T 23-04-2016 NIAKO_RS27695 617160dbda91cbe8e670536417759dad 511 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 Gene3D G3DSA:3.30.450.20 162 282 8.4E-18 T 23-04-2016 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SMART SM00086 242 285 6.1E-5 T 23-04-2016 IPR001610 PAC motif NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SMART SM00387 434 546 2.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 PANTHER PTHR24423 151 545 9.5E-69 T 23-04-2016 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SUPERFAMILY SSF47384 312 392 6.47E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 543 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 2.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 292 7.4E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SMART SM00091 169 235 0.0096 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SUPERFAMILY SSF55874 383 544 5.89E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SUPERFAMILY SSF55785 157 282 3.66E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 Pfam PF08447 PAS fold 192 278 8.4E-8 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 Gene3D G3DSA:1.10.287.130 317 388 7.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 SMART SM00388 325 393 8.9E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 Gene3D G3DSA:3.30.565.10 393 545 2.2E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14760 c1e9c8b91f9d70b76e029ef4fc475e99 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 544 2.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 SUPERFAMILY SSF74650 22 234 2.79E-44 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 PANTHER PTHR22762:SF7 46 809 2.5E-234 T 23-04-2016 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 Pfam PF16338 Domain of unknown function (DUF4968) 32 122 9.3E-20 T 23-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 SUPERFAMILY SSF51445 239 583 7.52E-82 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 Pfam PF01055 Glycosyl hydrolases family 31 230 669 2.5E-137 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 Pfam PF13802 Galactose mutarotase-like 143 208 2.7E-22 T 23-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 Pfam PF17137 Domain of unknown function (DUF5110) 685 752 9.5E-15 T 23-04-2016 IPR033403 Domain of unknown function DUF5110 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 400 407 - T 23-04-2016 IPR030458 Glycosyl hydrolases family 31, active site NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 SUPERFAMILY SSF51011 584 664 8.63E-16 T 23-04-2016 NIAKO_RS18730 d24291fa2a8ed8fade4e7365bcdcd4cc 809 PANTHER PTHR22762 46 809 2.5E-234 T 23-04-2016 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 Pfam PF00849 RNA pseudouridylate synthase 14 158 2.5E-34 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 PANTHER PTHR11079:SF73 6 238 2.5E-68 T 23-04-2016 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 SUPERFAMILY SSF55120 4 236 7.84E-62 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 5 236 7.5E-63 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34675 5ed8ec9adce21d8f18ce355e3d499143 239 PANTHER PTHR11079 6 238 2.5E-68 T 23-04-2016 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Gene3D G3DSA:3.40.50.1360 11 271 1.9E-94 T 23-04-2016 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 19 256 5.4E-84 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 SUPERFAMILY SSF102588 352 401 1.22E-34 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 SUPERFAMILY SSF102588 448 633 1.22E-34 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 PANTHER PTHR11280:SF7 354 635 0.0 T 23-04-2016 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 PANTHER PTHR11280:SF7 1 329 0.0 T 23-04-2016 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 PANTHER PTHR11280 354 635 0.0 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 PANTHER PTHR11280 1 329 0.0 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Gene3D G3DSA:3.40.50.10320 435 634 1.4E-54 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Gene3D G3DSA:3.40.50.10320 351 391 1.4E-54 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 SUPERFAMILY SSF100950 11 259 3.72E-89 T 23-04-2016 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 22 243 9.1E-22 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 10 256 37.627 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 NIAKO_RS19430 a5673e01990a627bab4e3cad500ed9e0 635 Pfam PF02585 GlcNAc-PI de-N-acetylase 356 529 1.7E-16 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related NIAKO_RS06725 c9bfc8dc6be313a5ba933fef649993d1 100 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 6 98 5.3E-13 T 23-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 SUPERFAMILY SSF56322 5 409 5.36E-112 T 23-04-2016 IPR005801 ADC synthase GO:0009058 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 Pfam PF00425 chorismate binding enzyme 143 400 1.2E-86 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PANTHER PTHR11236 60 409 8.7E-117 T 23-04-2016 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PANTHER PTHR11236:SF18 60 409 8.7E-117 T 23-04-2016 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 Gene3D G3DSA:3.60.120.10 39 409 2.6E-118 T 23-04-2016 IPR005801 ADC synthase GO:0009058 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PRINTS PR00095 Anthranilate synthase component I signature 260 273 2.5E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PRINTS PR00095 Anthranilate synthase component I signature 246 259 2.5E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PRINTS PR00095 Anthranilate synthase component I signature 340 354 2.5E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS27570 17b33b2dc90ff25ad0e05673a7ae7d1e 413 PRINTS PR00095 Anthranilate synthase component I signature 355 369 2.5E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS36395 9b462746b6b2e0b89439260dc015a91b 227 SUPERFAMILY SSF54001 106 226 1.73E-31 T 23-04-2016 NIAKO_RS36395 9b462746b6b2e0b89439260dc015a91b 227 Pfam PF00877 NlpC/P60 family 117 221 6.1E-26 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS36395 9b462746b6b2e0b89439260dc015a91b 227 PANTHER PTHR21666 106 227 8.4E-26 T 23-04-2016 NIAKO_RS36395 9b462746b6b2e0b89439260dc015a91b 227 Gene3D G3DSA:3.90.1720.10 106 226 6.2E-35 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS23160 31ab31f8ffb19df148e142a1c3d2c212 378 SUPERFAMILY SSF53756 23 373 5.32E-63 T 23-04-2016 NIAKO_RS23160 31ab31f8ffb19df148e142a1c3d2c212 378 PANTHER PTHR12526 21 374 4.8E-40 T 23-04-2016 NIAKO_RS23160 31ab31f8ffb19df148e142a1c3d2c212 378 Pfam PF13477 Glycosyl transferase 4-like 8 150 2.9E-20 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS23160 31ab31f8ffb19df148e142a1c3d2c212 378 Gene3D G3DSA:3.40.50.2000 191 351 1.5E-15 T 23-04-2016 NIAKO_RS23160 31ab31f8ffb19df148e142a1c3d2c212 378 Pfam PF00534 Glycosyl transferases group 1 190 352 1.6E-27 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 PIRSF PIRSF001554 1 403 7.8E-138 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 SUPERFAMILY SSF56059 1 254 8.73E-70 T 23-04-2016 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 PANTHER PTHR11815:SF1 1 403 2.9E-200 T 23-04-2016 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Pfam PF08442 ATP-grasp domain 2 218 1.5E-65 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 403 37.772 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Gene3D G3DSA:3.40.50.261 257 398 1.1E-60 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 PANTHER PTHR11815 1 403 2.9E-200 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Gene3D G3DSA:3.30.470.20 106 255 2.2E-54 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Pfam PF00549 CoA-ligase 278 391 1.3E-24 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 273 298 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 SUPERFAMILY SSF52210 255 398 4.58E-49 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 398 3.6E-135 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NIAKO_RS01875 8c0863876d8224baad9520c728e75ff5 403 Gene3D G3DSA:3.30.1490.20 22 105 2.1E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 PANTHER PTHR22604:SF120 1 361 8.4E-87 T 23-04-2016 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 8.2E-27 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 2.6E-11 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 Gene3D G3DSA:3.40.50.720 1 137 7.2E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01715 6092737832466627baf79d58105771d0 361 SUPERFAMILY SSF51735 3 151 1.32E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01715 6092737832466627baf79d58105771d0 361 Gene3D G3DSA:3.30.360.10 138 360 9.8E-47 T 23-04-2016 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 PANTHER PTHR22604 1 361 8.4E-87 T 23-04-2016 NIAKO_RS01715 6092737832466627baf79d58105771d0 361 SUPERFAMILY SSF55347 128 254 2.62E-31 T 23-04-2016 NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.5E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 5.5E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 240 2.5E-59 T 23-04-2016 NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 SUPERFAMILY SSF51735 5 242 1.1E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PANTHER PTHR24322 148 180 1.3E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 PANTHER PTHR24322 11 132 1.3E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20935 08e32e38a16cd3b5b116dd0a42aa3717 242 Gene3D G3DSA:3.40.50.720 2 242 2.4E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1081 4.5E-248 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF56935 453 825 6.41E-81 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF56935 986 1081 6.41E-81 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF56935 329 417 6.41E-81 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF56935 107 245 6.41E-81 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF56935 901 945 6.41E-81 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 221 6.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 SUPERFAMILY SSF49464 27 108 6.15E-19 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.40.170.20 982 1081 2.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.40.170.20 338 402 2.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.40.170.20 910 935 2.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.40.170.20 436 835 2.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.40.170.20 222 241 2.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Pfam PF13715 CarboxypepD_reg-like domain 29 110 8.2E-18 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.170.130.10 113 221 1.5E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 197 227 4.3E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532 608 1079 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532 8 383 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532 484 554 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532:SF57 608 1079 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532:SF57 8 383 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 PANTHER PTHR11532:SF57 484 554 1.3E-243 T 23-04-2016 NIAKO_RS27065 d45cbe33dec5e40383a0237a168227d9 1081 Gene3D G3DSA:2.60.40.1120 28 112 1.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 PANTHER PTHR18937:SF261 519 1168 4.1E-205 T 23-04-2016 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 PIRSF PIRSF005719 1 1173 3.1E-255 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF52540 2 216 1.39E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF52540 1068 1154 1.39E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF75553 485 677 1.83E-24 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Gene3D G3DSA:3.40.50.300 400 465 6.2E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF52540 758 856 1.78E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF52540 896 932 1.78E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SUPERFAMILY SSF52540 966 1168 1.78E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 PANTHER PTHR18937 519 1168 4.1E-205 T 23-04-2016 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 627 2.2E-17 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1162 3.1E-53 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1168 1.2E-301 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1171 21.25 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 PANTHER PTHR18937:SF261 2 502 4.1E-205 T 23-04-2016 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Gene3D G3DSA:3.40.50.300 2 163 1.7E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 Gene3D G3DSA:3.40.50.300 1017 1170 1.7E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 SMART SM00968 520 632 3.9E-13 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NIAKO_RS07705 434b3848d1a8f6693cddbae1aa6ba9b0 1173 PANTHER PTHR18937 2 502 4.1E-205 T 23-04-2016 NIAKO_RS28695 1f5c26a4e9c332913c1b41c10d7d6fdf 145 PANTHER PTHR26402 4 132 1.9E-31 T 23-04-2016 NIAKO_RS28695 1f5c26a4e9c332913c1b41c10d7d6fdf 145 SMART SM00448 4 129 2.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28695 1f5c26a4e9c332913c1b41c10d7d6fdf 145 Pfam PF00072 Response regulator receiver domain 6 129 1.2E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28695 1f5c26a4e9c332913c1b41c10d7d6fdf 145 SUPERFAMILY SSF52172 2 138 4.7E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28695 1f5c26a4e9c332913c1b41c10d7d6fdf 145 Gene3D G3DSA:3.40.50.2300 4 133 9.5E-35 T 23-04-2016 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF49899 1092 1311 4.66E-36 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.40.10 932 1003 1.2E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.40.10 1026 1091 2.9E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.120.200 1102 1309 4.7E-32 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:3.20.20.80 630 778 1.6E-9 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF49384 1400 1548 1.88E-34 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.40.710 1406 1548 5.0E-34 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.40.710 1559 1702 7.0E-39 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF51445 622 778 1.56E-14 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1727 1799 3.1E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF49265 925 1092 8.11E-18 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 PANTHER PTHR34154 584 844 1.1E-23 T 23-04-2016 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF49373 1337 1381 8.63E-6 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1152 1306 1.6E-26 T 23-04-2016 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.40.1080 1322 1379 6.3E-6 T 23-04-2016 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SMART SM01067 1405 1487 8.3E-7 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SMART SM01067 1557 1639 4.9E-18 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Pfam PF11790 Glycosyl hydrolase catalytic core 582 796 1.1E-32 T 23-04-2016 IPR024655 Uncharacterised protein family, glycosyl hydrolase catalytic domain NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SUPERFAMILY SSF49384 1561 1702 6.8E-37 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Pfam PF00942 Cellulose binding domain 1566 1638 8.2E-19 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Pfam PF00942 Cellulose binding domain 1410 1484 9.0E-16 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 Gene3D G3DSA:2.60.20.10 479 562 4.2E-5 T 23-04-2016 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SMART SM00060 1016 1091 0.0027 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS15855 9a29004bd80b490903f628387eeabe7f 1799 SMART SM00060 923 1000 8.2E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 Pfam PF07690 Major Facilitator Superfamily 9 301 6.4E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 Gene3D G3DSA:1.20.1250.20 2 187 1.4E-28 T 23-04-2016 NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 Gene3D G3DSA:1.20.1250.20 198 378 2.8E-10 T 23-04-2016 NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 PANTHER PTHR23501 1 404 2.2E-90 T 23-04-2016 NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 SUPERFAMILY SSF103473 4 376 2.75E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07410 ae358ba7a772dfd8c95b564ff2c83974 406 PANTHER PTHR23501:SF4 1 404 2.2E-90 T 23-04-2016 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 Gene3D G3DSA:1.10.260.40 9 58 2.1E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 PANTHER PTHR10245 9 186 1.7E-27 T 23-04-2016 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 Gene3D G3DSA:2.60.120.10 59 188 2.5E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 SUPERFAMILY SSF51182 60 187 1.63E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 PANTHER PTHR10245:SF49 9 186 1.7E-27 T 23-04-2016 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 Pfam PF07883 Cupin domain 118 187 2.3E-12 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 SUPERFAMILY SSF47413 4 73 2.45E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 SMART SM00530 12 67 1.8E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS13360 f2621bda76de91a2c26af1c44d2de35d 189 Pfam PF01381 Helix-turn-helix 13 64 5.3E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 204 12.584 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695:SF1 174 212 1.5E-32 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695:SF1 1 113 1.5E-32 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695 1 113 1.5E-32 T 23-04-2016 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695 142 156 1.5E-32 T 23-04-2016 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695 174 212 1.5E-32 T 23-04-2016 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PANTHER PTHR33695:SF1 142 156 1.5E-32 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 Pfam PF01252 Signal peptidase (SPase) II 11 196 1.8E-31 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 179 195 4.3E-13 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 4.3E-13 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS27725 e74af9d9ab4a12c7b795edf888fa37ce 229 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 4.3E-13 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 PANTHER PTHR11019 30 287 7.8E-41 T 23-04-2016 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 PANTHER PTHR11019:SF45 30 287 7.8E-41 T 23-04-2016 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 Pfam PF02311 AraC-like ligand binding domain 36 91 8.9E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 Pfam PF12833 Helix-turn-helix domain 202 279 1.0E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 Gene3D G3DSA:1.10.10.60 235 279 7.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 SUPERFAMILY SSF46689 236 279 3.76E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 4.6E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 4.6E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 SUPERFAMILY SSF51215 36 159 1.57E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 Gene3D G3DSA:2.60.120.280 37 160 5.9E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS36405 ad96104e7bee67e9946887229e1c6f37 287 SMART SM00342 195 279 1.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02105 9548edc8ae7c57acf2785fac0b1d1634 214 Gene3D G3DSA:3.90.470.20 39 111 8.9E-11 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS02105 9548edc8ae7c57acf2785fac0b1d1634 214 Gene3D G3DSA:3.90.470.20 112 161 1.4E-8 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS02105 9548edc8ae7c57acf2785fac0b1d1634 214 SUPERFAMILY SSF56214 39 92 5.62E-7 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS02105 9548edc8ae7c57acf2785fac0b1d1634 214 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 100 165 4.2E-9 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS02105 9548edc8ae7c57acf2785fac0b1d1634 214 SUPERFAMILY SSF56214 100 161 7.33E-11 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS17110 d691facbf81f71afb4ef27fcec1f4bea 114 Pfam PF01638 HxlR-like helix-turn-helix 24 110 3.7E-31 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS17110 d691facbf81f71afb4ef27fcec1f4bea 114 SUPERFAMILY SSF46785 13 111 6.82E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17110 d691facbf81f71afb4ef27fcec1f4bea 114 Gene3D G3DSA:1.10.10.10 9 110 2.5E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17110 d691facbf81f71afb4ef27fcec1f4bea 114 PANTHER PTHR33204 3 110 3.5E-40 T 23-04-2016 NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 725 814 1.41E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1328 1409 2.0E-20 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 603 725 7.85E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 730 812 6.7E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 1086 1153 4.1E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 796 895 6.67E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 1069 1153 1.57E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Pfam PF13585 C-terminal domain of CHU protein family 1327 1409 1.1E-23 T 23-04-2016 NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Pfam PF00801 PKD domain 1085 1145 3.5E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Pfam PF00801 PKD domain 1169 1233 1.1E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Pfam PF00801 PKD domain 998 1059 4.8E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 815 897 8.5E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 640 727 7.9E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 1160 1242 2.3E-21 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 Gene3D G3DSA:2.60.40.670 987 1073 9.7E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 951 1073 2.75E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 1076 1159 2.8E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 643 725 2.7E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 816 905 0.0012 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 989 1074 1.3E-10 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 731 814 1.7 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SMART SM00089 1162 1245 2.1E-15 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS19275 26ebc4b2a09827643a417b9c2e3f6c52 1411 SUPERFAMILY SSF49299 1160 1243 2.62E-20 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 447 494 9.3E-12 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 25 76 3.3E-7 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 Gene3D G3DSA:2.120.10.30 219 293 2.5E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 Gene3D G3DSA:2.120.10.30 349 402 2.5E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 Pfam PF01345 Domain of unknown function DUF11 452 488 6.5E-8 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 Pfam PF01345 Domain of unknown function DUF11 10 70 3.4E-6 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 688 767 1.3E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS09740 e198670303652cc929116d434ce7e527 767 SUPERFAMILY SSF63825 196 414 6.8E-9 T 23-04-2016 NIAKO_RS06805 5eabc9c36a9d1e566f48c5c2b6554ceb 771 SUPERFAMILY SSF48208 242 734 2.15E-23 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS06805 5eabc9c36a9d1e566f48c5c2b6554ceb 771 Gene3D G3DSA:1.50.10.10 333 536 1.6E-13 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS06805 5eabc9c36a9d1e566f48c5c2b6554ceb 771 Gene3D G3DSA:2.70.98.50 114 332 2.1E-14 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS09885 1ea861e2bd614ca5df625358462e23cc 448 SUPERFAMILY SSF53300 241 355 1.56E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS09885 1ea861e2bd614ca5df625358462e23cc 448 PANTHER PTHR33608 7 448 7.5E-124 T 23-04-2016 NIAKO_RS09885 1ea861e2bd614ca5df625358462e23cc 448 PANTHER PTHR33608:SF3 7 448 7.5E-124 T 23-04-2016 NIAKO_RS09885 1ea861e2bd614ca5df625358462e23cc 448 Pfam PF01882 Protein of unknown function DUF58 203 288 9.3E-20 T 23-04-2016 IPR002881 Domain of unknown function DUF58 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1038 1.2E-223 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 237 7.5E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.40.170.20 241 260 4.5E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.40.170.20 935 1038 4.5E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.40.170.20 329 791 4.5E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.40.170.20 871 896 4.5E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.60.40.1120 31 128 4.7E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Gene3D G3DSA:2.170.130.10 134 240 1.4E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532:SF57 569 1037 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532:SF57 1 398 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532:SF57 485 545 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532 569 1037 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532 1 398 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 PANTHER PTHR11532 485 545 8.5E-206 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 SUPERFAMILY SSF56935 320 781 8.24E-75 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 SUPERFAMILY SSF56935 862 906 8.24E-75 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 SUPERFAMILY SSF56935 947 1037 8.24E-75 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 SUPERFAMILY SSF56935 119 261 8.24E-75 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 Pfam PF13620 Carboxypeptidase regulatory-like domain 31 110 2.0E-12 T 23-04-2016 NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 SUPERFAMILY SSF49464 30 126 2.94E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25630 4d5c3a284cadf1411e10265b96fb0a91 1040 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 213 243 6.3E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03625 1b7805c732ccd0b82064413c5451c1bd 704 Gene3D G3DSA:1.50.10.10 349 669 3.1E-11 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS03625 1b7805c732ccd0b82064413c5451c1bd 704 SUPERFAMILY SSF48208 308 699 6.24E-47 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 PIRSF PIRSF001123 19 374 3.7E-83 T 23-04-2016 IPR008007 Peptidase M42 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 Gene3D G3DSA:2.40.30.40 89 179 1.7E-21 T 23-04-2016 IPR023367 Peptidase M42, domain 2 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 PANTHER PTHR32481 18 372 9.3E-106 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 Pfam PF05343 M42 glutamyl aminopeptidase 66 358 9.6E-73 T 23-04-2016 IPR008007 Peptidase M42 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 Gene3D G3DSA:3.40.630.10 18 88 4.3E-69 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 Gene3D G3DSA:3.40.630.10 186 368 4.3E-69 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 SUPERFAMILY SSF101821 88 197 3.05E-23 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 PANTHER PTHR32481:SF10 18 372 9.3E-106 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 SUPERFAMILY SSF53187 192 364 5.8E-57 T 23-04-2016 NIAKO_RS18085 774fffa8866f38634bf23cab117eed66 375 SUPERFAMILY SSF53187 21 99 5.8E-57 T 23-04-2016 NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PANTHER PTHR24320 3 152 1.2E-46 T 23-04-2016 NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PANTHER PTHR24320 172 298 1.2E-46 T 23-04-2016 NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 5.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 5.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 SUPERFAMILY SSF51735 2 272 6.08E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 Gene3D G3DSA:3.40.50.720 3 271 2.3E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 Pfam PF00106 short chain dehydrogenase 6 137 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PANTHER PTHR24320:SF72 3 152 1.2E-46 T 23-04-2016 NIAKO_RS11115 7232481b0b72ccbe3eb23b857aade702 300 PANTHER PTHR24320:SF72 172 298 1.2E-46 T 23-04-2016 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 SUPERFAMILY SSF51366 10 256 5.06E-73 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 252 2.8E-79 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 PANTHER PTHR22854 1 258 6.2E-90 T 23-04-2016 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 66 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 PANTHER PTHR22854:SF2 1 258 6.2E-90 T 23-04-2016 NIAKO_RS01775 d246cd1ecff305be40b17f196113b7bf 261 Gene3D G3DSA:3.20.20.70 2 256 9.4E-89 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 Pfam PF12833 Helix-turn-helix domain 214 292 5.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 PANTHER PTHR11019 50 295 3.2E-39 T 23-04-2016 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 Pfam PF02311 AraC-like ligand binding domain 49 153 3.1E-16 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 SMART SM00342 208 291 1.9E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 Gene3D G3DSA:2.60.120.280 27 167 3.8E-31 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 Gene3D G3DSA:1.10.10.60 245 293 1.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 PANTHER PTHR11019:SF65 50 295 3.2E-39 T 23-04-2016 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 SUPERFAMILY SSF46689 245 293 2.02E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 SUPERFAMILY SSF46689 193 241 1.16E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 2.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 2.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 SUPERFAMILY SSF51215 30 159 6.93E-27 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17495 0a8b7c8c13a95d432a99738bb37050d6 295 Gene3D G3DSA:1.10.10.60 189 244 1.4E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 PANTHER PTHR11271 17 437 2.1E-74 T 23-04-2016 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 Gene3D G3DSA:2.30.40.10 22 83 3.4E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 Gene3D G3DSA:2.30.40.10 409 437 3.4E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 SUPERFAMILY SSF51338 379 436 2.9E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 SUPERFAMILY SSF51556 82 397 1.8E-59 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 Gene3D G3DSA:3.20.20.140 381 408 6.7E-6 T 23-04-2016 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 SUPERFAMILY SSF51338 23 139 2.88E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 Pfam PF01979 Amidohydrolase family 78 433 9.5E-39 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 PANTHER PTHR11271:SF33 17 437 2.1E-74 T 23-04-2016 NIAKO_RS19640 f7694c44dce790475d48817d383424ec 438 Gene3D G3DSA:3.20.20.140 84 380 1.5E-58 T 23-04-2016 NIAKO_RS31870 2467caaf2b4766056d34d35db9ae229e 189 Pfam PF00510 Cytochrome c oxidase subunit III 47 187 1.5E-14 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NIAKO_RS31870 2467caaf2b4766056d34d35db9ae229e 189 Gene3D G3DSA:1.20.120.80 13 185 3.4E-37 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 NIAKO_RS31870 2467caaf2b4766056d34d35db9ae229e 189 SUPERFAMILY SSF81452 13 185 1.02E-33 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NIAKO_RS31870 2467caaf2b4766056d34d35db9ae229e 189 PANTHER PTHR11403 20 185 6.8E-23 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 Gene3D G3DSA:2.40.160.20 19 76 3.1E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 Gene3D G3DSA:2.40.160.20 108 239 3.1E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 SUPERFAMILY SSF56925 183 241 1.15E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 SUPERFAMILY SSF56925 19 79 1.15E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 SUPERFAMILY SSF56925 107 151 1.15E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11375 eef34ae14dc3346ab36271e3d39f3138 243 Pfam PF13568 Outer membrane protein beta-barrel domain 11 219 3.4E-29 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 PIRSF PIRSF005572 30 412 1.1E-53 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 PANTHER PTHR11601:SF17 1 412 5.9E-197 T 23-04-2016 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 PANTHER PTHR11601 1 412 5.9E-197 T 23-04-2016 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 Pfam PF00266 Aminotransferase class-V 33 401 2.6E-153 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 15 412 3.3E-183 T 23-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 224 243 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 Gene3D G3DSA:3.40.640.10 44 290 6.4E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 Gene3D G3DSA:3.90.1150.10 291 407 1.6E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS01085 e4f6259be7760ef7adeb7f0dc2e4fcd8 413 SUPERFAMILY SSF53383 12 410 9.84E-128 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 129 1132 3.1E-242 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.40.170.20 409 477 1.7E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.40.170.20 1030 1061 1.7E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.40.170.20 327 353 1.7E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.40.170.20 956 988 1.7E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.40.170.20 530 909 1.7E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SMART SM00965 69 120 3.7E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532 538 1089 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532 1113 1131 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532 20 457 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 299 329 3.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.170.130.10 219 326 8.3E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Gene3D G3DSA:2.60.40.1120 130 216 1.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Pfam PF07660 Secretin and TonB N terminus short domain 69 118 3.3E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Pfam PF07715 TonB-dependent Receptor Plug Domain 219 323 1.6E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF49464 128 200 2.09E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 Pfam PF13715 CarboxypepD_reg-like domain 130 211 1.1E-15 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532:SF57 538 1089 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532:SF57 1113 1131 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 PANTHER PTHR11532:SF57 20 457 1.1E-223 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF56935 208 348 1.14E-79 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF56935 947 990 1.14E-79 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF56935 402 491 1.14E-79 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF56935 1028 1068 1.14E-79 T 23-04-2016 NIAKO_RS30065 f0930ce1bcea446df7f0181367b83d38 1133 SUPERFAMILY SSF56935 528 874 1.14E-79 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342:SF201 421 613 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342:SF201 319 373 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342:SF201 37 286 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 Pfam PF00884 Sulfatase 65 479 5.2E-79 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 Gene3D G3DSA:3.40.720.10 64 504 2.4E-101 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342 421 613 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342 319 373 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 PANTHER PTHR10342 37 286 2.4E-221 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 SUPERFAMILY SSF53649 65 594 3.34E-122 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 Gene3D G3DSA:3.30.1120.10 510 599 8.8E-16 T 23-04-2016 NIAKO_RS18945 4d0cb948da8f0ff6a778018a84e15625 801 ProSitePatterns PS00523 Sulfatases signature 1. 109 121 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS11145 8e33ffe8f1f3f3e0e6e4d3189406cba5 369 Gene3D G3DSA:1.20.1260.10 9 124 6.3E-6 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS11145 8e33ffe8f1f3f3e0e6e4d3189406cba5 369 Pfam PF01988 VIT family 150 361 4.1E-60 T 23-04-2016 IPR008217 Ccc1 family NIAKO_RS11145 8e33ffe8f1f3f3e0e6e4d3189406cba5 369 SUPERFAMILY SSF47240 8 54 1.94E-6 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS11145 8e33ffe8f1f3f3e0e6e4d3189406cba5 369 PANTHER PTHR31851 150 363 3.2E-61 T 23-04-2016 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 Gene3D G3DSA:2.40.30.20 5 102 5.7E-28 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 PANTHER PTHR21098 1 194 1.0E-79 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 Pfam PF00677 Lumazine binding domain 98 182 1.9E-19 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 Pfam PF00677 Lumazine binding domain 3 84 7.7E-19 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 SUPERFAMILY SSF63380 1 86 1.62E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 SUPERFAMILY SSF63380 91 193 1.28E-30 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 Gene3D G3DSA:2.40.30.20 103 193 4.8E-28 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 8.6E-58 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS24275 7dd4ad7371e382da759be9e0b10ca0ca 195 PIRSF PIRSF000498 1 195 1.9E-65 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 PANTHER PTHR31964 1 145 9.6E-21 T 23-04-2016 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 Pfam PF00582 Universal stress protein family 152 275 3.0E-7 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 Pfam PF00582 Universal stress protein family 1 144 8.9E-25 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 SUPERFAMILY SSF52402 1 149 5.79E-30 T 23-04-2016 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 PANTHER PTHR31964:SF45 1 145 9.6E-21 T 23-04-2016 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 SUPERFAMILY SSF52402 152 278 5.61E-11 T 23-04-2016 NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 Gene3D G3DSA:3.40.50.620 1 146 2.0E-27 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 PRINTS PR01438 Universal stress protein signature 104 116 1.1E-11 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 PRINTS PR01438 Universal stress protein signature 1 18 1.1E-11 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 PRINTS PR01438 Universal stress protein signature 122 144 1.1E-11 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS31580 7093405938ff8861c9e06d78c56e18ff 279 Gene3D G3DSA:3.40.50.620 150 276 1.2E-9 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS00600 f3351f9ae98baafb8679864b61bc810f 174 PANTHER PTHR16504:SF7 4 173 2.4E-26 T 23-04-2016 NIAKO_RS00600 f3351f9ae98baafb8679864b61bc810f 174 Gene3D G3DSA:3.40.50.1000 51 173 3.8E-39 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS00600 f3351f9ae98baafb8679864b61bc810f 174 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 171 6.5E-40 T 23-04-2016 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.-|Reactome: REACT_1698 NIAKO_RS00600 f3351f9ae98baafb8679864b61bc810f 174 SUPERFAMILY SSF56784 1 172 2.59E-24 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS00600 f3351f9ae98baafb8679864b61bc810f 174 PANTHER PTHR16504 4 173 2.4E-26 T 23-04-2016 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 Gene3D G3DSA:3.30.1280.10 1 79 2.5E-25 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 SUPERFAMILY SSF82697 2 78 2.44E-22 T 23-04-2016 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 5 78 5.3E-25 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 15 78 3.0E-6 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 80 2.5E-17 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 PANTHER PTHR34696 1 80 1.2E-22 T 23-04-2016 NIAKO_RS26890 df9a755a9673b4f4988d442b194dde51 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 3 80 18.132 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS16060 daa2e4d22257d944afe6c9884b8afd4e 182 Pfam PF06445 GyrI-like small molecule binding domain 91 181 1.5E-10 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain NIAKO_RS16060 daa2e4d22257d944afe6c9884b8afd4e 182 Gene3D G3DSA:3.20.80.10 41 181 4.1E-14 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS16060 daa2e4d22257d944afe6c9884b8afd4e 182 SUPERFAMILY SSF55136 41 169 1.64E-12 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS16060 daa2e4d22257d944afe6c9884b8afd4e 182 SMART SM00871 32 182 3.1E-11 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding NIAKO_RS04200 2d7d23d78f50d09182a76edd4ccf43ca 807 SUPERFAMILY SSF56935 171 783 1.79E-39 T 23-04-2016 NIAKO_RS04200 2d7d23d78f50d09182a76edd4ccf43ca 807 Gene3D G3DSA:2.170.130.10 171 223 7.2E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04200 2d7d23d78f50d09182a76edd4ccf43ca 807 Gene3D G3DSA:2.40.170.20 224 781 4.5E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04200 2d7d23d78f50d09182a76edd4ccf43ca 807 Pfam PF14905 Outer membrane protein beta-barrel family 381 781 1.8E-66 T 23-04-2016 NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 Pfam PF00027 Cyclic nucleotide-binding domain 30 117 2.5E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 PANTHER PTHR24567:SF33 32 192 3.5E-22 T 23-04-2016 NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 SUPERFAMILY SSF51206 13 141 1.7E-24 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 SMART SM00100 11 133 2.0E-5 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 Gene3D G3DSA:2.60.120.10 2 155 3.8E-40 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS07270 c5686ee926867aa631079301485ddc43 193 PANTHER PTHR24567 32 192 3.5E-22 T 23-04-2016 NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 SMART SM00382 30 227 2.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 PANTHER PTHR24220 7 222 1.1E-83 T 23-04-2016 NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 Pfam PF00005 ABC transporter 21 169 1.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 Gene3D G3DSA:3.40.50.300 2 223 2.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 PANTHER PTHR24220:SF470 7 222 1.1E-83 T 23-04-2016 NIAKO_RS13000 92bf2a4dc085f9d00451490f4d777c39 229 SUPERFAMILY SSF52540 6 223 5.22E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Pfam PF00122 E1-E2 ATPase 87 318 3.2E-62 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SMART SM00831 8 81 5.8E-20 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF56784 325 345 1.24E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF56784 445 687 1.24E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Gene3D G3DSA:3.40.1110.10 318 495 1.7E-24 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 76 3.1E-17 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF81653 120 225 5.49E-28 T 23-04-2016 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 19 839 1.9E-244 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PANTHER PTHR24093:SF128 27 841 5.2E-250 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF81665 228 321 5.1E-93 T 23-04-2016 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF81665 637 839 5.1E-93 T 23-04-2016 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 SUPERFAMILY SSF81665 9 119 5.1E-93 T 23-04-2016 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PANTHER PTHR24093 27 841 5.2E-250 T 23-04-2016 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 87 534 9.9E-46 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 559 676 1.2E-28 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Gene3D G3DSA:2.70.150.10 27 59 3.1E-40 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Gene3D G3DSA:2.70.150.10 114 225 3.1E-40 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Gene3D G3DSA:1.20.1110.10 557 834 7.2E-75 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Gene3D G3DSA:1.20.1110.10 60 113 7.2E-75 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Pfam PF00689 Cation transporting ATPase, C-terminus 671 833 1.2E-16 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 257 276 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 361 374 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 646 661 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 747 768 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 796 817 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 696 709 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 716 732 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 664 675 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 PRINTS PR01836 Magnesium-transporting ATPase signature 240 256 2.5E-42 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NIAKO_RS09165 17c262f1431b21c8f23cc3c455fcdc30 843 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 602 2.4E-24 T 23-04-2016 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 PANTHER PTHR24421:SF1 1 248 6.6E-37 T 23-04-2016 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 Gene3D G3DSA:3.30.565.10 123 248 4.0E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 Pfam PF07730 Histidine kinase 55 117 1.3E-9 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 PRINTS PR00344 Bacterial sensor protein C-terminal signature 210 228 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 205 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 PRINTS PR00344 Bacterial sensor protein C-terminal signature 234 247 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 SMART SM00387 155 248 0.0022 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 PANTHER PTHR24421 1 248 6.6E-37 T 23-04-2016 NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 156 248 7.5E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33115 e0248d43dfcff9ab900555f5ce1ea9fd 248 SUPERFAMILY SSF55874 132 248 3.14E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 Gene3D G3DSA:3.20.20.70 178 285 1.0E-7 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 Pfam PF04055 Radical SAM superfamily 85 261 8.8E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 PANTHER PTHR11228:SF26 27 327 2.0E-78 T 23-04-2016 NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 PANTHER PTHR11228 27 327 2.0E-78 T 23-04-2016 NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 SMART SM00729 80 308 0.0048 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS33095 3671a848758a91a0f9ffa42dbdfe6f44 369 SUPERFAMILY SSF102114 61 270 2.62E-13 T 23-04-2016 NIAKO_RS19375 1406cba8d0a5eff72fa391a427369a61 182 Pfam PF00719 Inorganic pyrophosphatase 24 174 2.8E-58 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS19375 1406cba8d0a5eff72fa391a427369a61 182 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 19 175 32.193 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS19375 1406cba8d0a5eff72fa391a427369a61 182 Gene3D G3DSA:3.90.80.10 4 181 9.4E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS19375 1406cba8d0a5eff72fa391a427369a61 182 SUPERFAMILY SSF50324 4 181 4.19E-69 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS19375 1406cba8d0a5eff72fa391a427369a61 182 PANTHER PTHR10286 6 175 3.1E-88 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82693 41 134 5.49E-11 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Pfam PF00873 AcrB/AcrD/AcrF family 4 1051 2.0E-186 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PANTHER PTHR32063:SF0 1 495 1.4E-243 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PANTHER PTHR32063:SF0 512 1053 1.4E-243 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Gene3D G3DSA:3.30.70.1430 41 137 9.1E-9 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Gene3D G3DSA:3.30.2090.10 183 264 4.5E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PANTHER PTHR32063 1 495 1.4E-243 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PANTHER PTHR32063 512 1053 1.4E-243 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.1E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82714 743 831 6.54E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82693 267 323 1.12E-15 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82693 135 181 1.12E-15 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82866 290 489 2.75E-39 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Gene3D G3DSA:1.10.3850.10 844 1054 1.2E-48 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Gene3D G3DSA:1.10.3850.10 275 490 3.2E-50 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82714 183 265 3.27E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 SUPERFAMILY SSF82866 841 1055 3.14E-40 T 23-04-2016 NIAKO_RS03805 800df1421d734fedd993a83063d23b97 1078 Gene3D G3DSA:3.30.2090.10 742 830 1.1E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 PANTHER PTHR37311:SF1 4 249 2.2E-41 T 23-04-2016 NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 Gene3D G3DSA:3.90.1560.10 18 242 5.4E-65 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 PANTHER PTHR37311 4 249 2.2E-41 T 23-04-2016 NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 Hamap MF_00490 2-phosphosulfolactate phosphatase [comB]. 8 244 27.003 T 23-04-2016 IPR022995 Probable 2-phosphosulpholactate phosphatase GO:0019295|GO:0050532 KEGG: 00680+3.1.3.71 NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 SUPERFAMILY SSF142823 12 240 5.62E-61 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 NIAKO_RS31635 1ddc2936987514ce08db4b7c0d3b721d 250 Pfam PF04029 2-phosphosulpholactate phosphatase 14 237 7.6E-69 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 Gene3D G3DSA:3.40.50.720 2 119 2.2E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.0E-31 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.0E-31 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.0E-31 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.0E-31 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 Pfam PF02629 CoA binding domain 6 99 8.8E-30 T 23-04-2016 IPR003781 CoA-binding GO:0048037 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 SMART SM00881 4 100 1.1E-34 T 23-04-2016 IPR003781 CoA-binding GO:0048037 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 SUPERFAMILY SSF51735 1 122 7.88E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 SUPERFAMILY SSF52210 123 287 2.49E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 Pfam PF00549 CoA-ligase 151 264 3.5E-14 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PANTHER PTHR11117 1 290 1.3E-171 T 23-04-2016 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 PIRSF PIRSF001553 1 290 1.7E-125 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 1.2E-129 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NIAKO_RS00675 ef8f5fb2c291a9f7d9cb08cfab44de76 290 Gene3D G3DSA:3.40.50.261 120 287 2.9E-66 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 SUPERFAMILY SSF51735 24 136 7.32E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 Pfam PF01925 Sulfite exporter TauE/SafE 264 497 7.5E-36 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 PANTHER PTHR30269 254 503 5.1E-60 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 PANTHER PTHR30269:SF5 254 503 5.1E-60 T 23-04-2016 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 Pfam PF14824 Sirohaem biosynthesis protein central 144 167 2.2E-9 T 23-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 Gene3D G3DSA:3.30.160.110 139 172 7.1E-12 T 23-04-2016 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 25 195 1.1E-31 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 SUPERFAMILY SSF75615 133 208 4.58E-14 T 23-04-2016 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 Pfam PF13241 Putative NAD(P)-binding 27 138 4.1E-22 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS34375 6bbaf38c962b59fd3957c67c228fa840 503 Gene3D G3DSA:3.40.50.720 23 136 4.6E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Pfam PF13534 4Fe-4S dicluster domain 560 638 5.2E-10 T 23-04-2016 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Gene3D G3DSA:3.30.43.10 2 87 8.5E-19 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 623 634 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Pfam PF01565 FAD binding domain 37 170 9.9E-33 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 SUPERFAMILY SSF55103 278 526 2.94E-49 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Gene3D G3DSA:3.30.465.10 91 181 2.8E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Gene3D G3DSA:3.30.465.10 216 273 2.8E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Pfam PF02913 FAD linked oxidases, C-terminal domain 274 522 1.3E-44 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 SUPERFAMILY SSF46548 502 642 2.44E-10 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 Gene3D G3DSA:1.10.1060.10 500 653 2.5E-14 T 23-04-2016 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 SUPERFAMILY SSF56176 1 273 1.31E-49 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 PANTHER PTHR11748 1 178 2.3E-107 T 23-04-2016 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 PANTHER PTHR11748 240 570 2.3E-107 T 23-04-2016 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 PANTHER PTHR11748:SF35 1 178 2.3E-107 T 23-04-2016 NIAKO_RS33455 222d7ba295706c957b619147f07ec077 975 PANTHER PTHR11748:SF35 240 570 2.3E-107 T 23-04-2016 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PANTHER PTHR30023 20 434 7.0E-36 T 23-04-2016 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 388 401 1.5E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 54 73 1.5E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 259 281 1.5E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 329 343 1.5E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 PANTHER PTHR30023:SF0 20 434 7.0E-36 T 23-04-2016 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 42 411 1.1E-34 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 Gene3D G3DSA:3.40.710.10 254 431 7.6E-48 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 Gene3D G3DSA:3.40.710.10 35 85 7.6E-48 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 23 424 7.4E-48 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS32660 bc50ded5169cccaca789c2af026fbec2 434 SUPERFAMILY SSF56601 24 427 3.04E-50 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 ProSitePatterns PS00674 AAA-protein family signature. 337 355 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 SUPERFAMILY SSF140990 448 636 1.22E-62 T 23-04-2016 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Gene3D G3DSA:3.40.50.300 191 375 1.3E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 144 632 9.5E-210 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Pfam PF01434 Peptidase family M41 429 631 6.8E-69 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 SUPERFAMILY SSF52540 193 461 1.21E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 SMART SM00382 228 369 4.0E-25 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 366 4.1E-47 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Pfam PF06480 FtsH Extracellular 20 132 4.6E-8 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Gene3D G3DSA:1.10.8.60 376 442 1.1E-26 T 23-04-2016 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 635 34.215 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 PANTHER PTHR23076:SF10 5 635 0.0 T 23-04-2016 NIAKO_RS09350 938d37d840f19db8f85d83ececfedece 648 PANTHER PTHR23076 5 635 0.0 T 23-04-2016 NIAKO_RS28850 3c88f507e1ffdef40a707f6106e37527 263 Pfam PF00005 ABC transporter 40 171 1.7E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS28850 3c88f507e1ffdef40a707f6106e37527 263 SMART SM00382 42 222 1.7E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS28850 3c88f507e1ffdef40a707f6106e37527 263 Gene3D G3DSA:3.40.50.300 8 221 8.7E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28850 3c88f507e1ffdef40a707f6106e37527 263 SUPERFAMILY SSF52540 42 224 3.47E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28850 3c88f507e1ffdef40a707f6106e37527 263 PANTHER PTHR24220 12 218 5.7E-48 T 23-04-2016 NIAKO_RS21290 bf33a9b2213c4b66e398d484e3ab560d 266 Pfam PF02397 Bacterial sugar transferase 29 211 1.6E-48 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS21290 bf33a9b2213c4b66e398d484e3ab560d 266 PANTHER PTHR30576 29 225 1.9E-62 T 23-04-2016 NIAKO_RS21290 bf33a9b2213c4b66e398d484e3ab560d 266 PANTHER PTHR30576:SF0 29 225 1.9E-62 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PANTHER PTHR24423 186 194 2.3E-131 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PANTHER PTHR24423 399 787 2.3E-131 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Gene3D G3DSA:3.40.50.2300 670 788 3.8E-38 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 3.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 3.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 3.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 3.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SMART SM00448 672 783 2.0E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SMART SM00388 420 485 4.8E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SUPERFAMILY SSF55874 474 642 3.54E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Pfam PF00072 Response regulator receiver domain 674 781 2.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Gene3D G3DSA:1.10.287.130 411 481 1.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SUPERFAMILY SSF52172 671 788 1.85E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Pfam PF07695 7TM diverse intracellular signalling 202 402 5.2E-20 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SUPERFAMILY SSF47384 403 486 1.02E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 SMART SM00387 532 650 1.4E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PANTHER PTHR24423:SF382 186 194 2.3E-131 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 PANTHER PTHR24423:SF382 399 787 2.3E-131 T 23-04-2016 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 643 3.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 485 7.7E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30915 bd847cddef9b680de7e8a0a548e99571 788 Gene3D G3DSA:3.30.565.10 486 643 8.1E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21760 e2116b3734a66f0707d361463272a6e6 498 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 425 498 5.0E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS21760 e2116b3734a66f0707d361463272a6e6 498 Gene3D G3DSA:3.90.182.10 184 319 9.2E-5 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS21760 e2116b3734a66f0707d361463272a6e6 498 Gene3D G3DSA:2.60.40.10 321 407 3.9E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 SUPERFAMILY SSF49785 392 533 3.62E-23 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 Pfam PF04616 Glycosyl hydrolases family 43 76 340 4.9E-19 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 Pfam PF00754 F5/8 type C domain 403 523 4.2E-16 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 SUPERFAMILY SSF75005 50 358 9.71E-42 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 Gene3D G3DSA:2.60.40.10 551 626 2.3E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 SUPERFAMILY SSF49265 551 624 1.1E-7 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 Gene3D G3DSA:2.60.120.260 398 533 1.3E-23 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 PANTHER PTHR22925 76 216 2.4E-17 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 PANTHER PTHR22925 237 371 2.4E-17 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS30050 1b27b2902d5bfd9b1c158680d43bdf02 627 Gene3D G3DSA:2.115.10.20 50 356 1.6E-42 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 Gene3D G3DSA:1.10.150.120 76 151 4.0E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 PANTHER PTHR11908 1 134 4.3E-31 T 23-04-2016 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 59 4.5E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 PANTHER PTHR11908:SF66 1 134 4.3E-31 T 23-04-2016 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 SUPERFAMILY SSF47741 74 149 2.09E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 Gene3D G3DSA:3.10.20.30 3 75 5.0E-27 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 Pfam PF01799 [2Fe-2S] binding domain 74 144 1.2E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS17510 abae93efbb7d44263ba42d05450909f9 154 SUPERFAMILY SSF54292 3 79 3.8E-24 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 3.2E-136 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 PANTHER PTHR18919:SF81 1 394 4.0E-216 T 23-04-2016 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 SUPERFAMILY SSF53901 272 393 4.83E-38 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Pfam PF00108 Thiolase, N-terminal domain 6 264 1.3E-97 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Pfam PF02803 Thiolase, C-terminal domain 271 392 1.4E-44 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 PIRSF PIRSF000429 1 394 2.1E-130 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Gene3D G3DSA:3.40.47.10 196 277 5.5E-75 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Gene3D G3DSA:3.40.47.10 5 125 5.5E-75 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 SUPERFAMILY SSF53901 5 271 7.27E-86 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Gene3D G3DSA:3.40.47.10 145 195 2.6E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 Gene3D G3DSA:3.40.47.10 278 393 2.6E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 NIAKO_RS07785 82d6e1d242159aaeb91b28d81569fcdf 394 PANTHER PTHR18919 1 394 4.0E-216 T 23-04-2016 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 Gene3D G3DSA:3.40.50.1700 374 643 2.7E-81 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 SMART SM01217 677 746 6.5E-32 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 388 640 1.4E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PRINTS PR00133 Glycosyl hydrolase family 3 signature 117 136 5.6E-22 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PRINTS PR00133 Glycosyl hydrolase family 3 signature 98 114 5.6E-22 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PRINTS PR00133 Glycosyl hydrolase family 3 signature 270 288 5.6E-22 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PRINTS PR00133 Glycosyl hydrolase family 3 signature 200 216 5.6E-22 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PRINTS PR00133 Glycosyl hydrolase family 3 signature 163 179 5.6E-22 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 Gene3D G3DSA:3.20.20.300 22 364 1.1E-109 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 SUPERFAMILY SSF52279 388 457 2.22E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 SUPERFAMILY SSF52279 488 643 2.22E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 Pfam PF14310 Fibronectin type III-like domain 677 746 7.4E-23 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 270 287 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 38 347 3.8E-84 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 SUPERFAMILY SSF51445 23 384 4.42E-104 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620 26 53 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620 480 751 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620 76 464 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620:SF5 26 53 0.0 T 23-04-2016 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620:SF5 480 751 0.0 T 23-04-2016 NIAKO_RS30045 aa91e64bda78dcb1312453ca488c815e 758 PANTHER PTHR30620:SF5 76 464 0.0 T 23-04-2016 NIAKO_RS27040 c5f9b494263ee38946293cf2fea958c8 153 PANTHER PTHR10681 1 132 7.0E-41 T 23-04-2016 NIAKO_RS27040 c5f9b494263ee38946293cf2fea958c8 153 PIRSF PIRSF000239 1 137 9.4E-22 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS27040 c5f9b494263ee38946293cf2fea958c8 153 Pfam PF00578 AhpC/TSA family 2 129 9.6E-35 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS27040 c5f9b494263ee38946293cf2fea958c8 153 Gene3D G3DSA:3.40.30.10 2 152 9.1E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS27040 c5f9b494263ee38946293cf2fea958c8 153 SUPERFAMILY SSF52833 2 152 3.75E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36645 b8529fb8aa7c836e378880dcc3bddb04 394 PANTHER PTHR34220:SF1 153 393 1.7E-61 T 23-04-2016 NIAKO_RS36645 b8529fb8aa7c836e378880dcc3bddb04 394 PANTHER PTHR34220 153 393 1.7E-61 T 23-04-2016 NIAKO_RS36645 b8529fb8aa7c836e378880dcc3bddb04 394 Pfam PF06580 Histidine kinase 204 281 6.3E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF49464 24 105 1.83E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.40.170.20 930 1004 3.1E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.40.170.20 224 242 3.1E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.40.170.20 842 885 3.1E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.40.170.20 316 796 3.1E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1004 7.7E-239 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 PANTHER PTHR11532 435 1002 5.2E-216 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 PANTHER PTHR11532 3 361 5.2E-216 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF56935 104 246 1.53E-92 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF56935 307 395 1.53E-92 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF56935 425 771 1.53E-92 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF56935 833 877 1.53E-92 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 SUPERFAMILY SSF56935 920 1004 1.53E-92 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.170.130.10 111 223 3.2E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Pfam PF13715 CarboxypepD_reg-like domain 25 107 8.4E-13 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 PANTHER PTHR11532:SF57 435 1002 5.2E-216 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 PANTHER PTHR11532:SF57 3 361 5.2E-216 T 23-04-2016 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 198 228 8.2E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Gene3D G3DSA:2.60.40.1120 25 110 1.9E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17005 5b88681d66b4b9101844d552b074b5ab 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 222 8.0E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 Pfam PF14322 Starch-binding associating with outer membrane 95 216 3.0E-13 T 23-04-2016 NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 SUPERFAMILY SSF48452 599 629 8.6E-97 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 SUPERFAMILY SSF48452 18 554 8.6E-97 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 Pfam PF07980 SusD family 294 550 6.2E-39 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 Gene3D G3DSA:1.25.40.10 439 527 1.2E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24515 89e7c548f2fe60ce5683f346571da21c 631 Gene3D G3DSA:1.25.40.10 199 337 1.2E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00395 8889ea5e3e7ea1a08805836b031a7a2d 441 Pfam PF04932 O-Antigen ligase 217 357 1.1E-19 T 23-04-2016 IPR007016 O-antigen ligase-related NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 PANTHER PTHR11808 5 382 2.9E-203 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 PIRSF PIRSF001434 1 381 6.9E-153 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 186 200 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 SUPERFAMILY SSF53383 6 379 7.93E-126 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 Gene3D G3DSA:3.90.1150.10 243 379 1.5E-57 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 378 2.0E-158 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS00575 52278450adb3fa1fb526919f2b10b68e 394 Gene3D G3DSA:3.40.640.10 4 242 3.2E-96 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.0E-139 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PIRSF PIRSF001529 1 423 3.2E-148 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 Gene3D G3DSA:1.10.287.40 1 108 1.2E-18 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 SUPERFAMILY SSF55681 120 420 1.56E-88 T 23-04-2016 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 5.8E-21 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 5.8E-21 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 5.8E-21 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 5.8E-21 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 5.8E-21 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PANTHER PTHR11778 1 422 2.7E-165 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 PANTHER PTHR11778:SF0 1 422 2.7E-165 T 23-04-2016 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 1.3E-24 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 401 2.1E-34 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 Gene3D G3DSA:3.30.930.10 109 418 1.2E-116 T 23-04-2016 NIAKO_RS28330 f36c6f49907bf6a186af5e0f13eaa375 423 SUPERFAMILY SSF46589 1 116 1.46E-23 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 Gene3D G3DSA:3.20.20.120 122 354 1.6E-76 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 PANTHER PTHR13794:SF4 1 392 1.6E-111 T 23-04-2016 NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 PANTHER PTHR13794 1 392 1.6E-111 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 Pfam PF13378 Enolase C-terminal domain-like 146 367 1.1E-56 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 112 9.5E-18 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 Gene3D G3DSA:3.30.390.10 1 121 1.3E-47 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 SUPERFAMILY SSF54826 1 117 5.84E-33 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 SMART SM00922 141 246 7.0E-18 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS18565 00ec6f30c55cc3794ad3307519a29e99 392 SUPERFAMILY SSF51604 100 375 3.93E-74 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 PANTHER PTHR10668:SF4 6 485 1.3E-84 T 23-04-2016 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 PANTHER PTHR10668 6 485 1.3E-84 T 23-04-2016 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 Pfam PF01593 Flavin containing amine oxidoreductase 11 484 2.3E-29 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 Gene3D G3DSA:3.50.50.60 5 85 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 Gene3D G3DSA:3.50.50.60 435 485 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 Gene3D G3DSA:3.50.50.60 214 303 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 Gene3D G3DSA:3.50.50.60 121 137 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 6 487 2.8E-116 T 23-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 SUPERFAMILY SSF51905 3 318 3.67E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 SUPERFAMILY SSF51905 448 489 3.67E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 4.8E-5 T 23-04-2016 NIAKO_RS34555 54225119bb6e64f66478fb086c3646f4 493 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 4.8E-5 T 23-04-2016 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 PANTHER PTHR30173 1 167 2.7E-53 T 23-04-2016 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 PANTHER PTHR30173:SF21 1 167 2.7E-53 T 23-04-2016 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 167 1.3E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 Gene3D G3DSA:1.10.10.10 113 173 3.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 SUPERFAMILY SSF88659 115 173 3.92E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 SUPERFAMILY SSF88946 2 105 4.12E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 Gene3D G3DSA:1.10.1740.10 4 108 2.9E-28 T 23-04-2016 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 Pfam PF08281 Sigma-70, region 4 116 167 1.9E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04690 9d3d17ed08b5461f798b74ec96b0b563 186 Pfam PF04542 Sigma-70 region 2 21 88 4.2E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF56801 507 1055 1.44E-135 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00501 AMP-binding enzyme 546 937 7.6E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00501 AMP-binding enzyme 2660 3052 3.5E-85 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00501 AMP-binding enzyme 1599 1992 2.0E-91 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00550 Phosphopantetheine attachment site 3164 3227 1.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00550 Phosphopantetheine attachment site 2104 2167 2.3E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00550 Phosphopantetheine attachment site 1044 1100 7.3E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 3413 3653 4.45E-31 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 2824 2965 1.4E-33 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 567 961 5.5E-110 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2681 3077 3.0E-121 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1621 2017 5.0E-124 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1741 1752 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2802 2813 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 687 698 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 76 254 8.89E-46 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13745 HxxPF-repeated domain 2509 2603 2.1E-15 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13745 HxxPF-repeated domain 395 492 1.9E-22 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13745 HxxPF-repeated domain 1451 1545 3.8E-20 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 1315 1585 4.34E-49 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 695 849 1.1E-26 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 1751 1906 5.1E-34 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF56801 2617 3175 2.75E-143 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 2190 2368 4.22E-41 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 PANTHER PTHR24095:SF137 718 1495 0.0 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 PANTHER PTHR24095:SF137 1511 3134 0.0 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13193 AMP-binding enzyme C-terminal domain 3061 3134 5.4E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13193 AMP-binding enzyme C-terminal domain 945 1018 2.2E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF13193 AMP-binding enzyme C-terminal domain 2001 2074 2.5E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 PANTHER PTHR24095 718 1495 0.0 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 PANTHER PTHR24095 1511 3134 0.0 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF47336 2095 2167 4.97E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 2376 2645 3.11E-54 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 539 694 1.8E-47 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 2652 2823 9.6E-50 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.40.50.980 1592 1750 3.9E-47 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 264 515 6.34E-52 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF47336 1037 1109 1.96E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00668 Condensation domain 1128 1427 1.9E-75 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00668 Condensation domain 71 372 1.8E-70 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00668 Condensation domain 2187 2486 5.8E-74 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Pfam PF00668 Condensation domain 3260 3528 5.6E-43 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 1131 1309 5.23E-45 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF47336 3154 3227 1.7E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF56801 1561 2112 8.9E-146 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:1.10.1200.10 1048 1111 4.8E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:1.10.1200.10 2107 2172 2.2E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:1.10.1200.10 3165 3227 1.9E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 SUPERFAMILY SSF52777 3259 3404 3.67E-31 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2126 2141 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3186 3201 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1067 1082 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.30.300.30 3048 3164 4.9E-38 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.30.300.30 933 1047 3.6E-37 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:3.30.300.30 1988 2106 1.3E-38 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:2.30.38.10 2966 3043 1.3E-26 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:2.30.38.10 1907 1982 1.6E-27 T 23-04-2016 NIAKO_RS11535 a0d54d143f42ed1b47c70085a2604a2b 3654 Gene3D G3DSA:2.30.38.10 850 926 2.2E-25 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 118 322 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 712 761 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 351 599 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 632 682 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 970 1039 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF56935 801 911 2.11E-40 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Pfam PF13620 Carboxypeptidase regulatory-like domain 30 110 1.5E-15 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 PANTHER PTHR30069 22 1025 3.4E-138 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Gene3D G3DSA:2.60.40.1120 31 109 1.5E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 PANTHER PTHR30069:SF6 22 1025 3.4E-138 T 23-04-2016 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 SUPERFAMILY SSF49452 24 106 2.35E-10 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Gene3D G3DSA:2.40.170.20 978 1029 2.8E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Gene3D G3DSA:2.40.170.20 564 909 2.8E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Gene3D G3DSA:2.40.170.20 331 530 2.8E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01970 7c939da1894bac5c10f5dd143ac79f26 1086 Gene3D G3DSA:2.40.170.20 227 299 2.8E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11405 603b2123f7af798ac5ee2242bc2b206b 667 ProSitePatterns PS00436 Peroxidases active site signature. 591 602 - T 23-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 NIAKO_RS11405 603b2123f7af798ac5ee2242bc2b206b 667 Gene3D G3DSA:2.60.40.10 489 571 1.5E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 493 7.1E-130 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PANTHER PTHR32248:SF4 1 495 2.0E-138 T 23-04-2016 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PANTHER PTHR32248 1 495 2.0E-138 T 23-04-2016 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PRINTS PR00045 Sigma-54 factor signature 411 422 1.3E-23 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PRINTS PR00045 Sigma-54 factor signature 194 211 1.3E-23 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PRINTS PR00045 Sigma-54 factor signature 395 407 1.3E-23 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PRINTS PR00045 Sigma-54 factor signature 469 487 1.3E-23 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 Gene3D G3DSA:1.10.260.40 382 407 2.9E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 1.2E-13 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 Pfam PF04552 Sigma-54, DNA binding domain 336 493 9.2E-53 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 PIRSF PIRSF000774 1 495 1.5E-141 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 474 481 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30695 28228acd862cb0eb4121b64960de18c3 495 Pfam PF04963 Sigma-54 factor, core binding domain 122 313 4.6E-55 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 NIAKO_RS32885 0fc83d5bc069564836d3d20246c378c9 320 PANTHER PTHR10091:SF16 74 317 2.5E-17 T 23-04-2016 NIAKO_RS32885 0fc83d5bc069564836d3d20246c378c9 320 Gene3D G3DSA:2.70.98.10 10 314 4.6E-37 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS32885 0fc83d5bc069564836d3d20246c378c9 320 PANTHER PTHR10091 74 317 2.5E-17 T 23-04-2016 NIAKO_RS32885 0fc83d5bc069564836d3d20246c378c9 320 SUPERFAMILY SSF74650 15 313 2.76E-46 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS32885 0fc83d5bc069564836d3d20246c378c9 320 Pfam PF01263 Aldose 1-epimerase 29 311 4.5E-33 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 1.5E-55 T 23-04-2016 NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 SUPERFAMILY SSF51735 7 254 2.96E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PANTHER PTHR24322 155 189 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PANTHER PTHR24322 12 139 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 Gene3D G3DSA:3.40.50.720 3 254 2.8E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32970 5b8799c057ff05c5cdf568a80cf143a9 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 193 5.9E-37 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 Pfam PF02527 rRNA small subunit methyltransferase G 15 155 4.3E-38 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 SUPERFAMILY SSF53335 5 154 3.54E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 PANTHER PTHR31760:SF0 2 180 5.4E-53 T 23-04-2016 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 Gene3D G3DSA:3.40.50.150 2 191 2.1E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 PIRSF PIRSF003078 2 209 8.8E-54 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 PANTHER PTHR31760 2 180 5.4E-53 T 23-04-2016 NIAKO_RS26860 a892cca2a2d939916ed54dc97653993e 209 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 8 206 24.76 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 SUPERFAMILY SSF52283 2 134 2.55E-39 T 23-04-2016 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 PANTHER PTHR10996:SF161 1 326 1.4E-165 T 23-04-2016 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 Gene3D G3DSA:3.40.50.720 1 135 2.7E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 SUPERFAMILY SSF51735 100 296 1.12E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 Gene3D G3DSA:3.40.50.720 136 303 7.0E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 295 5.6E-55 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 PANTHER PTHR10996 1 326 1.4E-165 T 23-04-2016 NIAKO_RS31570 3cbf2b6e5358663956aebe030cd3e1da 327 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 326 1.5E-30 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 Pfam PF00578 AhpC/TSA family 262 379 2.1E-24 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 PANTHER PTHR13871 271 385 2.7E-28 T 23-04-2016 NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 Pfam PF14289 Domain of unknown function (DUF4369) 19 134 1.1E-8 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 SUPERFAMILY SSF52833 260 384 2.3E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 Gene3D G3DSA:3.40.30.10 261 397 1.9E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS37275 81d0c37b0629dbf6239fea571f139423 399 ProSitePatterns PS00194 Thioredoxin family active site. 290 308 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 PANTHER PTHR26402:SF151 2 200 1.2E-46 T 23-04-2016 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 SMART SM00448 2 115 7.2E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 PANTHER PTHR26402 2 200 1.2E-46 T 23-04-2016 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 SUPERFAMILY SSF46894 133 208 7.48E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 SMART SM00421 147 204 6.5E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.0E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 Gene3D G3DSA:3.40.50.2300 3 120 7.4E-28 T 23-04-2016 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 SUPERFAMILY SSF52172 3 131 1.32E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 Pfam PF00072 Response regulator receiver domain 4 115 1.6E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03205 9cf4dc1cfdd58cb3a801eea79ea7275e 210 Gene3D G3DSA:1.10.10.10 121 206 7.5E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 242 276 5.6E-9 T 23-04-2016 IPR011964 YVTN beta-propeller repeat NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 SUPERFAMILY SSF51004 49 344 6.54E-44 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 SUPERFAMILY SSF53649 471 719 8.63E-9 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 Pfam PF10282 Lactonase, 7-bladed beta-propeller 194 312 1.5E-7 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 Pfam PF04185 Phosphoesterase family 470 715 6.9E-8 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 PANTHER PTHR13833 149 342 2.8E-19 T 23-04-2016 NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 Gene3D G3DSA:2.130.10.10 48 133 2.3E-11 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS32865 1001f3231509812431d148c7ffa44e6c 815 Gene3D G3DSA:2.130.10.10 142 398 1.2E-36 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS27895 e072af7962995f8694c06c738468bea7 99 Gene3D G3DSA:1.10.10.10 3 97 3.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27895 e072af7962995f8694c06c738468bea7 99 SUPERFAMILY SSF46785 8 96 2.19E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27895 e072af7962995f8694c06c738468bea7 99 Pfam PF13601 Winged helix DNA-binding domain 16 95 8.9E-30 T 23-04-2016 IPR027395 Winged helix DNA-binding domain NIAKO_RS27895 e072af7962995f8694c06c738468bea7 99 PANTHER PTHR37318 1 99 3.4E-28 T 23-04-2016 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 34 126 5.9E-15 T 23-04-2016 IPR025554 Domain of unknown function DUF4140 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 Gene3D G3DSA:2.170.130.10 330 387 2.7E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 34 333 2.5E-34 T 23-04-2016 IPR011935 Conserved hypothetical protein CHP02231 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 392 596 7.2E-41 T 23-04-2016 IPR011935 Conserved hypothetical protein CHP02231 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 Pfam PF13598 Domain of unknown function (DUF4139) 217 592 1.8E-92 T 23-04-2016 IPR011935 Conserved hypothetical protein CHP02231 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 PANTHER PTHR31005 328 596 1.1E-52 T 23-04-2016 NIAKO_RS21395 969d655c4ae9697f47340d6a55c72517 598 PANTHER PTHR31005 1 286 1.1E-52 T 23-04-2016 NIAKO_RS20690 9f65749055e1cbb29c42596d07c4a879 343 SUPERFAMILY SSF51004 46 312 9.55E-38 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NIAKO_RS20690 9f65749055e1cbb29c42596d07c4a879 343 Gene3D G3DSA:2.130.10.10 32 301 7.1E-33 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 Gene3D G3DSA:3.40.50.720 2 224 1.3E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.6E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.6E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 SUPERFAMILY SSF51735 1 227 7.08E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PANTHER PTHR24322 153 187 1.7E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 PANTHER PTHR24322 10 137 1.7E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01385 e91eabacd71b069fbdc69e0683c91822 249 Pfam PF00106 short chain dehydrogenase 6 199 1.1E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28475 b051354c167b55a930ce0377e08fe6bf 698 Pfam PF13567 Domain of unknown function (DUF4131) 23 201 3.2E-23 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 NIAKO_RS28475 b051354c167b55a930ce0377e08fe6bf 698 PANTHER PTHR30619 15 534 3.0E-69 T 23-04-2016 NIAKO_RS28475 b051354c167b55a930ce0377e08fe6bf 698 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 265 443 1.0E-24 T 23-04-2016 IPR004477 ComEC/Rec2-related protein NIAKO_RS28475 b051354c167b55a930ce0377e08fe6bf 698 Pfam PF03772 Competence protein 244 512 4.0E-62 T 23-04-2016 IPR004477 ComEC/Rec2-related protein NIAKO_RS28475 b051354c167b55a930ce0377e08fe6bf 698 PANTHER PTHR30619:SF2 15 534 3.0E-69 T 23-04-2016 NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 SUPERFAMILY SSF48208 402 776 1.84E-34 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 PANTHER PTHR34987:SF2 23 730 4.6E-64 T 23-04-2016 NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 PANTHER PTHR34987 23 730 4.6E-64 T 23-04-2016 NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 Gene3D G3DSA:2.60.120.260 46 161 1.2E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 Pfam PF05592 Bacterial alpha-L-rhamnosidase 279 775 6.5E-49 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS06615 1c3089845abec22838006514065fdf9a 792 SUPERFAMILY SSF49785 29 130 7.99E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 SUPERFAMILY SSF51445 48 398 1.76E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PANTHER PTHR10030:SF25 240 398 5.2E-34 T 23-04-2016 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PANTHER PTHR10030:SF25 52 217 5.2E-34 T 23-04-2016 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PANTHER PTHR10030 240 398 5.2E-34 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PANTHER PTHR10030 52 217 5.2E-34 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PRINTS PR00741 Glycosyl hydrolase family 29 signature 349 370 1.4E-9 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PRINTS PR00741 Glycosyl hydrolase family 29 signature 146 162 1.4E-9 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 PRINTS PR00741 Glycosyl hydrolase family 29 signature 382 404 1.4E-9 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 SMART SM00812 46 429 2.8E-43 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 Pfam PF01120 Alpha-L-fucosidase 41 395 1.3E-63 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS03315 7bcefc88ea996da60e88f4e3f1adbc43 498 Gene3D G3DSA:3.20.20.80 43 398 1.6E-76 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Gene3D G3DSA:1.10.287.130 150 212 1.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Gene3D G3DSA:3.30.565.10 213 379 2.2E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SUPERFAMILY SSF55874 216 376 4.45E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SMART SM00388 158 226 7.9E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SMART SM00091 21 88 1.7E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SMART SM00387 266 378 8.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 377 2.3E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 375 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SUPERFAMILY SSF47384 146 226 1.12E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Gene3D G3DSA:3.30.450.20 10 136 8.7E-25 T 23-04-2016 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 PANTHER PTHR24423 9 381 3.8E-96 T 23-04-2016 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SMART SM00086 98 138 0.0048 T 23-04-2016 IPR001610 PAC motif NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 SUPERFAMILY SSF55785 32 145 4.34E-28 T 23-04-2016 IPR000014 PAS domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 159 224 1.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 PANTHER PTHR24423:SF518 9 381 3.8E-96 T 23-04-2016 NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 143 1.6E-27 T 23-04-2016 IPR000014 PAS domain NIAKO_RS31325 1cfa53730175e34ffa095fd4b4983e8f 384 Pfam PF13426 PAS domain 32 137 5.9E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 PANTHER PTHR11079 1 158 4.4E-48 T 23-04-2016 NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 Gene3D G3DSA:3.40.140.10 4 152 2.4E-50 T 23-04-2016 NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 PANTHER PTHR11079:SF25 1 158 4.4E-48 T 23-04-2016 NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 103 1.5E-26 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 SUPERFAMILY SSF53927 4 152 1.19E-46 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS19400 acf875f0955f2a88947f736728b598d8 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NIAKO_RS10510 ea5c44de7f97b379e61de468f6cd6c1c 352 Pfam PF04909 Amidohydrolase 105 335 1.1E-12 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS10510 ea5c44de7f97b379e61de468f6cd6c1c 352 SUPERFAMILY SSF51556 130 336 1.81E-18 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS10510 ea5c44de7f97b379e61de468f6cd6c1c 352 Gene3D G3DSA:3.20.20.140 30 336 8.7E-22 T 23-04-2016 NIAKO_RS15095 97aee51728ef438e4e1e2165d9d0dd37 193 Gene3D G3DSA:1.10.3820.10 9 99 8.0E-5 T 23-04-2016 NIAKO_RS15095 97aee51728ef438e4e1e2165d9d0dd37 193 SUPERFAMILY SSF48695 43 100 6.29E-6 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 123 7.6E-9 T 23-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 SUPERFAMILY SSF54966 1 127 9.42E-38 T 23-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 Gene3D G3DSA:3.30.70.150 1 127 5.3E-41 T 23-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 PANTHER PTHR23321:SF19 1 302 2.3E-49 T 23-04-2016 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 Gene3D G3DSA:3.20.20.110 128 413 5.1E-80 T 23-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 PANTHER PTHR23321 1 302 2.3E-49 T 23-04-2016 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 SUPERFAMILY SSF51649 128 406 2.09E-86 T 23-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 133 411 4.1E-86 T 23-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS17665 6e292829c69a9e61f6b746732f902974 414 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 175 183 - T 23-04-2016 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NIAKO_RS09585 4b1801482c052021ee2dee79c72c8420 330 PANTHER PTHR22925:SF42 21 324 1.7E-108 T 23-04-2016 NIAKO_RS09585 4b1801482c052021ee2dee79c72c8420 330 PANTHER PTHR22925 21 324 1.7E-108 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09585 4b1801482c052021ee2dee79c72c8420 330 Gene3D G3DSA:2.115.10.20 27 327 3.5E-81 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS09585 4b1801482c052021ee2dee79c72c8420 330 Pfam PF04616 Glycosyl hydrolases family 43 32 313 2.2E-53 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09585 4b1801482c052021ee2dee79c72c8420 330 SUPERFAMILY SSF75005 31 324 1.04E-73 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 SUPERFAMILY SSF46689 224 272 3.37E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 4.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 4.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 Gene3D G3DSA:1.10.10.60 225 272 9.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 SUPERFAMILY SSF55874 8 105 2.21E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 Pfam PF12833 Helix-turn-helix domain 194 272 1.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 Gene3D G3DSA:1.10.10.60 173 224 4.1E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 SMART SM00342 188 270 3.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21035 3934564980eaa3d6b62a800ad7e500b6 275 PANTHER PTHR11019 173 272 1.7E-20 T 23-04-2016 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 Gene3D G3DSA:3.40.50.2000 186 334 2.3E-19 T 23-04-2016 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 Pfam PF00534 Glycosyl transferases group 1 185 324 5.3E-19 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 SUPERFAMILY SSF53756 129 358 3.11E-51 T 23-04-2016 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 SUPERFAMILY SSF53756 1 99 3.11E-51 T 23-04-2016 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 PANTHER PTHR12526 1 101 2.5E-39 T 23-04-2016 NIAKO_RS27415 ed5be1ce701ca41b0193b2ae46c14f7a 359 PANTHER PTHR12526 136 359 2.5E-39 T 23-04-2016 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 PANTHER PTHR24012 1 98 1.9E-33 T 23-04-2016 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 Gene3D G3DSA:3.30.70.330 2 93 4.7E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 SMART SM00360 2 75 3.7E-29 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 SUPERFAMILY SSF54928 2 101 2.82E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 SMART SM00361 2 75 0.0053 T 23-04-2016 IPR003954 RNA recognition motif domain, eukaryote GO:0003676 NIAKO_RS07130 ea837df18b4d6f7175262ea623234987 102 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 2.2E-23 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 Pfam PF00793 DAHP synthetase I family 14 267 1.9E-61 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 15 268 1.3E-111 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 PANTHER PTHR21057 16 269 1.7E-137 T 23-04-2016 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 SUPERFAMILY SSF51569 13 269 6.78E-94 T 23-04-2016 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 Gene3D G3DSA:3.20.20.70 15 269 3.0E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS21990 8ebfdc3515804820bf3dda8b0a33ae02 270 PANTHER PTHR21057:SF2 16 269 1.7E-137 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF52172 768 893 1.42E-41 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:3.30.450.20 107 256 1.7E-19 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF00072 Response regulator receiver domain 771 881 7.7E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00387 631 747 1.4E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF01627 Hpt domain 924 983 1.6E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF55785 268 382 9.77E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00388 519 584 1.2E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF55785 370 497 7.15E-26 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF00989 PAS fold 385 496 3.7E-13 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:1.10.287.130 525 580 1.4E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00091 125 194 38.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00091 385 451 3.1E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00091 256 323 2.9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF55785 168 245 1.92E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PANTHER PTHR24423 369 928 3.0E-181 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PANTHER PTHR24423 105 239 3.0E-181 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF47226 864 1004 7.46E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00448 769 881 3.5E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00086 457 499 0.15 T 23-04-2016 IPR001610 PAC motif NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SMART SM00086 201 244 0.012 T 23-04-2016 IPR001610 PAC motif NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF55874 573 744 3.27E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 SUPERFAMILY SSF47384 502 585 4.51E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:3.30.450.20 387 524 1.5E-27 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF08447 PAS fold 173 237 4.2E-10 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 631 745 9.0E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:3.40.50.2300 768 890 1.1E-44 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:1.20.120.160 915 1007 7.5E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 251 1.3E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 382 506 1.2E-24 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PRINTS PR00344 Bacterial sensor protein C-terminal signature 707 725 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 700 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 686 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 744 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:3.30.450.20 257 386 9.9E-10 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Gene3D G3DSA:3.30.565.10 593 743 8.5E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF12860 PAS fold 264 377 3.1E-7 T 23-04-2016 NIAKO_RS30480 d9266eedb73ad0643c40e56a58ba6e69 1017 Pfam PF00512 His Kinase A (phospho-acceptor) domain 520 584 2.5E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15270 eaa0e13dc64f4d5e4c36bafd5dd2c4af 298 Gene3D G3DSA:3.40.50.1110 42 162 1.7E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS15270 eaa0e13dc64f4d5e4c36bafd5dd2c4af 298 Gene3D G3DSA:3.40.50.1110 219 296 1.7E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS15270 eaa0e13dc64f4d5e4c36bafd5dd2c4af 298 SUPERFAMILY SSF52266 43 136 1.06E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS15270 eaa0e13dc64f4d5e4c36bafd5dd2c4af 298 SUPERFAMILY SSF52266 201 296 1.06E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS15270 eaa0e13dc64f4d5e4c36bafd5dd2c4af 298 Pfam PF07611 Protein of unknown function (DUF1574) 137 282 3.1E-7 T 23-04-2016 IPR011468 Protein of unknown function DUF1574 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 Hamap MF_00163 Peptide deformylase [def]. 1 177 25.072 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PIRSF PIRSF004749 1 189 3.4E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 SUPERFAMILY SSF56420 1 180 2.75E-51 T 23-04-2016 IPR023635 Peptide deformylase NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 168 1.3E-37 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 Gene3D G3DSA:3.90.45.10 3 184 3.7E-56 T 23-04-2016 IPR023635 Peptide deformylase NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PRINTS PR01576 Peptide deformylase signature 32 61 1.7E-29 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PRINTS PR01576 Peptide deformylase signature 116 134 1.7E-29 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PRINTS PR01576 Peptide deformylase signature 135 164 1.7E-29 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PRINTS PR01576 Peptide deformylase signature 104 115 1.7E-29 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 PANTHER PTHR10458 1 189 1.6E-54 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NIAKO_RS21735 e9a3c9675912bcef19bd493b4ff7b49b 192 Pfam PF01327 Polypeptide deformylase 3 167 7.6E-45 T 23-04-2016 IPR023635 Peptide deformylase NIAKO_RS08575 85d0c323d73610b1752637598fd77fb1 692 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 614 691 1.1E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS08575 85d0c323d73610b1752637598fd77fb1 692 Gene3D G3DSA:2.60.40.10 520 601 5.9E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 Gene3D G3DSA:1.10.10.60 27 63 2.4E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 Pfam PF12833 Helix-turn-helix domain 32 107 2.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 PANTHER PTHR11019 4 106 1.0E-14 T 23-04-2016 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 Gene3D G3DSA:1.10.10.60 64 106 3.0E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 63 104 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 SMART SM00342 26 108 3.9E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14940 34b707b28db71a934b8d54ac304e3c7f 112 SUPERFAMILY SSF46689 62 109 3.27E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21090 1f1284eeb9d9153ef68186f602bc4389 287 Gene3D G3DSA:2.60.40.10 159 257 2.2E-17 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS21090 1f1284eeb9d9153ef68186f602bc4389 287 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 168 241 1.9E-16 T 23-04-2016 IPR018905 Alpha-galactosidase, NEW3 domain NIAKO_RS21090 1f1284eeb9d9153ef68186f602bc4389 287 PANTHER PTHR39198 46 287 1.9E-42 T 23-04-2016 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 PANTHER PTHR11699 23 543 9.1E-254 T 23-04-2016 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 Pfam PF00171 Aldehyde dehydrogenase family 58 512 5.0E-98 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 12 540 1.4E-233 T 23-04-2016 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0006537|GO:0006561 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|UniPathway: UPA00261 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 320 331 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 Gene3D G3DSA:3.40.605.10 42 306 2.0E-58 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 Gene3D G3DSA:3.40.309.10 307 499 1.0E-48 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 PANTHER PTHR11699:SF18 23 543 9.1E-254 T 23-04-2016 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 292 299 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS05735 c170e25951561cf96df6324b349ffdaa 543 SUPERFAMILY SSF53720 8 526 3.14E-117 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS08720 bba5d9d69fd47f111a4f3a6eee4f4f5d 1623 Gene3D G3DSA:3.40.630.30 1471 1599 3.8E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS08720 bba5d9d69fd47f111a4f3a6eee4f4f5d 1623 SUPERFAMILY SSF55729 1490 1590 2.8E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 Gene3D G3DSA:3.40.50.300 365 598 3.5E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 SUPERFAMILY SSF90123 35 341 2.22E-29 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 PANTHER PTHR24221:SF157 28 608 2.0E-182 T 23-04-2016 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 PANTHER PTHR24221 28 608 2.0E-182 T 23-04-2016 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 Pfam PF00664 ABC transporter transmembrane region 91 313 3.2E-8 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 Gene3D G3DSA:1.20.1560.10 27 344 1.2E-25 T 23-04-2016 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 SMART SM00382 389 580 6.0E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 Pfam PF00005 ABC transporter 382 534 1.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS25515 c9f2385bf9be024b60952086a95ed92c 609 SUPERFAMILY SSF52540 354 604 1.61E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 PANTHER PTHR30448:SF2 195 476 9.5E-103 T 23-04-2016 NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 Pfam PF03668 P-loop ATPase protein family 341 472 3.1E-26 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 PANTHER PTHR30448 195 476 9.5E-103 T 23-04-2016 NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 Pfam PF01636 Phosphotransferase enzyme family 29 248 4.2E-11 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 Gene3D G3DSA:3.90.1200.10 92 325 2.2E-30 T 23-04-2016 NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 SUPERFAMILY SSF56112 11 313 6.27E-27 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS32860 57b0e86f056582386612d53c740274b1 483 Gene3D G3DSA:3.30.200.20 9 90 5.4E-9 T 23-04-2016 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SMART SM00322 307 413 1.6 T 23-04-2016 IPR004087 K Homology domain GO:0003676 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SMART SM00322 233 306 1.2 T 23-04-2016 IPR004087 K Homology domain GO:0003676 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SUPERFAMILY SSF50249 135 202 1.52E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 345 2.9E-110 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Gene3D G3DSA:3.30.1480.10 3 126 6.6E-27 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SUPERFAMILY SSF54814 283 345 2.42E-12 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SUPERFAMILY SSF54814 203 280 2.42E-29 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 PANTHER PTHR22648:SF0 2 413 4.3E-105 T 23-04-2016 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Gene3D G3DSA:3.30.300.20 282 346 1.4E-19 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 PANTHER PTHR22648 2 413 4.3E-105 T 23-04-2016 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Gene3D G3DSA:2.40.50.140 132 201 1.2E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 SUPERFAMILY SSF69705 3 128 3.66E-28 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Pfam PF13184 NusA-like KH domain 233 297 5.0E-25 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 412 26.023 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Gene3D G3DSA:3.30.300.20 202 280 4.8E-35 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS30025 e72050343a4ca78658d86028032ca6e8 415 Pfam PF08529 NusA N-terminal domain 6 126 2.1E-24 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 Gene3D G3DSA:1.20.59.10 265 354 1.8E-21 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 Pfam PF01817 Chorismate mutase type II 272 349 1.5E-19 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 Gene3D G3DSA:3.20.20.70 10 253 1.2E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 PANTHER PTHR21057 11 270 5.6E-77 T 23-04-2016 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 SUPERFAMILY SSF51569 10 261 3.57E-62 T 23-04-2016 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 PANTHER PTHR21057:SF7 11 270 5.6E-77 T 23-04-2016 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 SMART SM00830 272 352 3.4E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 Pfam PF00793 DAHP synthetase I family 11 248 6.0E-37 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS22110 17ae3a26bd1c4168d8277847b7472e74 355 SUPERFAMILY SSF48600 262 352 1.53E-22 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 PANTHER PTHR10357:SF110 23 603 1.3E-111 T 23-04-2016 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 SUPERFAMILY SSF51445 104 496 2.06E-93 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 SUPERFAMILY SSF81296 17 112 1.43E-22 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 PANTHER PTHR10357 23 603 1.3E-111 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 18 93 1.9E-17 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 PIRSF PIRSF000463 8 604 2.6E-105 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 507 603 1.4E-13 T 23-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 SUPERFAMILY SSF51011 501 602 4.56E-15 T 23-04-2016 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Pfam PF00128 Alpha amylase, catalytic domain 261 453 3.5E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Pfam PF00128 Alpha amylase, catalytic domain 150 224 3.8E-15 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Gene3D G3DSA:2.60.40.1180 504 602 9.0E-19 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Gene3D G3DSA:2.60.40.10 17 107 4.2E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 SMART SM00642 103 487 2.0E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS31685 06d34aa4bd1a188b1cece043f2908d34 604 Gene3D G3DSA:3.20.20.80 112 489 3.6E-82 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 Gene3D G3DSA:3.40.50.300 3 222 3.5E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 Pfam PF00005 ABC transporter 19 156 1.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 PANTHER PTHR24220 5 255 2.3E-85 T 23-04-2016 NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 PANTHER PTHR24220:SF523 5 255 2.3E-85 T 23-04-2016 NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 SMART SM00382 28 203 3.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS36060 2c6040ee7fdd91c90ce09a22bff6f020 298 SUPERFAMILY SSF52540 3 215 2.66E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SMART SM00028 212 245 75.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SMART SM00028 252 285 78.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SMART SM00028 332 365 260.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SMART SM00028 373 406 33.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SUPERFAMILY SSF48452 302 461 1.43E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 Gene3D G3DSA:1.25.40.10 301 403 3.5E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 Gene3D G3DSA:1.25.40.10 48 300 5.0E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 PANTHER PTHR24423 1 6 2.2E-21 T 23-04-2016 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 PANTHER PTHR24423 528 738 2.2E-21 T 23-04-2016 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 Pfam PF07568 Histidine kinase 549 623 4.9E-24 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SUPERFAMILY SSF55874 611 735 9.04E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 PANTHER PTHR24423:SF472 1 6 2.2E-21 T 23-04-2016 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 PANTHER PTHR24423:SF472 528 738 2.2E-21 T 23-04-2016 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 Gene3D G3DSA:3.30.565.10 602 738 1.6E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 Pfam PF13581 Histidine kinase-like ATPase domain 649 736 1.7E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SUPERFAMILY SSF48452 100 309 3.22E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15535 c61c91c6427edf32b39c13e3fcea0473 742 SMART SM00387 644 742 1.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Pfam PF13091 PLD-like domain 46 178 2.2E-10 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SMART SM00487 241 416 5.4E-15 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Pfam PF04851 Type III restriction enzyme, res subunit 244 317 6.1E-6 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Gene3D G3DSA:3.40.50.300 225 393 3.9E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Pfam PF00271 Helicase conserved C-terminal domain 646 753 3.1E-9 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SUPERFAMILY SSF52540 190 446 2.22E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Pfam PF00176 SNF2 family N-terminal domain 350 457 4.7E-10 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SMART SM00382 262 409 3.7E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Gene3D G3DSA:3.30.870.10 108 180 2.0E-6 T 23-04-2016 NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SUPERFAMILY SSF52540 349 404 6.44E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SUPERFAMILY SSF52540 632 795 6.44E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 SUPERFAMILY SSF56024 111 181 3.77E-6 T 23-04-2016 NIAKO_RS26700 6cf3e1aaecabbca592060d42662acf46 1075 Gene3D G3DSA:3.40.50.300 643 764 4.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08935 032a26169afa11552c76c9766a9303c2 93 SUPERFAMILY SSF81585 4 40 5.72E-6 T 23-04-2016 NIAKO_RS08935 032a26169afa11552c76c9766a9303c2 93 Pfam PF11731 Pathogenicity locus 5 91 4.9E-30 T 23-04-2016 IPR021725 Pathogenicity locus NIAKO_RS08935 032a26169afa11552c76c9766a9303c2 93 Gene3D G3DSA:1.10.150.20 8 85 9.9E-12 T 23-04-2016 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 SMART SM01008 211 297 2.3E-20 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Gene3D G3DSA:3.30.365.10 325 439 1.3E-30 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Gene3D G3DSA:3.90.1170.50 180 294 8.9E-24 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 PANTHER PTHR11908 34 721 1.0E-153 T 23-04-2016 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Gene3D G3DSA:3.30.365.10 528 721 8.0E-46 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 603 671 3.9E-17 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 52 199 9.5E-17 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 323 556 3.4E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 SUPERFAMILY SSF56003 322 717 1.28E-108 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 SUPERFAMILY SSF56003 48 245 2.83E-43 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 PANTHER PTHR11908:SF2 34 721 1.0E-153 T 23-04-2016 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 Gene3D G3DSA:3.30.365.10 52 177 1.0E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02690 8ec71aec85e7a9d6865f8b941e5add82 721 PIRSF PIRSF036389 1 721 1.4E-229 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 16 224 4.3E-71 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 PANTHER PTHR30400:SF0 9 231 3.1E-81 T 23-04-2016 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 Gene3D G3DSA:1.10.3810.10 54 221 1.2E-57 T 23-04-2016 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 Pfam PF00912 Transglycosylase 54 221 2.1E-49 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 PANTHER PTHR30400 9 231 3.1E-81 T 23-04-2016 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 226 37.541 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 NIAKO_RS31070 d6456f4b21271332b97e2572c45b53e2 234 SUPERFAMILY SSF53955 53 221 7.87E-56 T 23-04-2016 IPR023346 Lysozyme-like domain NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 348 7.6E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 SUPERFAMILY SSF161098 119 333 1.8E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 Gene3D G3DSA:1.10.3720.10 120 345 5.5E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 PANTHER PTHR30465:SF0 2 79 3.9E-92 T 23-04-2016 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 PANTHER PTHR30465 106 349 3.9E-92 T 23-04-2016 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 PANTHER PTHR30465 2 79 3.9E-92 T 23-04-2016 NIAKO_RS09955 eb2be931573f0b6dd83c88c96c02d7ed 350 PANTHER PTHR30465:SF0 106 349 3.9E-92 T 23-04-2016 NIAKO_RS27230 278f7941214e82e3c685f60c99ddc079 168 Gene3D G3DSA:1.10.10.10 1 83 7.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27230 278f7941214e82e3c685f60c99ddc079 168 SUPERFAMILY SSF46785 3 121 7.98E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27230 278f7941214e82e3c685f60c99ddc079 168 PANTHER PTHR38465 1 118 6.5E-19 T 23-04-2016 NIAKO_RS27230 278f7941214e82e3c685f60c99ddc079 168 PIRSF PIRSF006707 1 168 3.6E-50 T 23-04-2016 IPR026282 DNA-binding protein, MJ1563 type NIAKO_RS27230 278f7941214e82e3c685f60c99ddc079 168 Pfam PF08279 HTH domain 28 80 1.6E-5 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 138 9.0E-54 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 139 55.903 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 PANTHER PTHR21272 1 138 3.4E-69 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 PIRSF PIRSF001399 1 139 5.1E-54 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 SUPERFAMILY SSF52304 1 138 4.32E-53 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 Pfam PF01220 Dehydroquinase class II 2 136 6.2E-52 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 Gene3D G3DSA:3.40.50.9100 1 138 2.5E-55 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS21835 4639d5124d37c788a3379969408788e9 139 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 137 3.0E-46 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Gene3D G3DSA:3.40.50.300 2 139 4.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 PANTHER PTHR13779:SF7 1 416 5.3E-196 T 23-04-2016 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 SMART SM00382 39 151 1.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 SUPERFAMILY SSF52540 3 215 1.31E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Gene3D G3DSA:1.10.3710.10 327 416 7.0E-31 T 23-04-2016 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 SUPERFAMILY SSF48019 232 416 1.08E-76 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Gene3D G3DSA:1.10.8.60 140 217 8.6E-9 T 23-04-2016 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 43 148 7.4E-18 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Pfam PF16193 AAA C-terminal domain 179 246 2.2E-23 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Gene3D G3DSA:1.20.272.10 228 326 4.8E-46 T 23-04-2016 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 PANTHER PTHR13779 1 416 5.3E-196 T 23-04-2016 NIAKO_RS00625 9dfad38a438e9258ece11a34d7ea640d 419 Pfam PF12002 MgsA AAA+ ATPase C terminal 247 412 1.7E-70 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 337 8.3E-122 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 PANTHER PTHR13710:SF81 512 588 3.3E-172 T 23-04-2016 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 PANTHER PTHR13710:SF81 2 339 3.3E-172 T 23-04-2016 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Pfam PF16124 RecQ zinc-binding 515 564 3.6E-11 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 SMART SM00490 239 320 5.0E-24 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Gene3D G3DSA:1.10.10.10 515 596 3.5E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Pfam PF00271 Helicase conserved C-terminal domain 213 318 6.4E-18 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Pfam PF00270 DEAD/DEAH box helicase 18 176 1.6E-20 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Gene3D G3DSA:3.40.50.300 197 334 1.7E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 Gene3D G3DSA:3.40.50.300 3 189 1.1E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 PANTHER PTHR13710 512 588 3.3E-172 T 23-04-2016 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 PANTHER PTHR13710 2 339 3.3E-172 T 23-04-2016 NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 SMART SM00487 12 208 9.7E-32 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS34225 2830596132a51ec06f15b761a3eda811 633 SUPERFAMILY SSF52540 55 338 9.55E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 PANTHER PTHR30173 3 154 5.2E-31 T 23-04-2016 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 Pfam PF08281 Sigma-70, region 4 98 150 8.7E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 154 1.6E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 Gene3D G3DSA:1.10.1740.10 3 76 1.8E-18 T 23-04-2016 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 SUPERFAMILY SSF88946 4 86 8.89E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 SUPERFAMILY SSF88659 96 154 3.18E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 Gene3D G3DSA:1.10.10.10 96 154 6.5E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32800 a211a4681c11bfce5eeb8bf186ab7634 161 Pfam PF04542 Sigma-70 region 2 10 75 1.6E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 SMART SM00640 33 464 5.7E-141 T 23-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 SUPERFAMILY SSF49899 344 504 3.24E-32 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 PANTHER PTHR30175:SF0 23 505 2.3E-132 T 23-04-2016 NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 Gene3D G3DSA:2.60.120.560 339 504 8.7E-35 T 23-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 Gene3D G3DSA:2.115.10.20 22 188 2.6E-9 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 387 464 1.5E-15 T 23-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 PANTHER PTHR30175 23 505 2.3E-132 T 23-04-2016 NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 33 344 5.7E-88 T 23-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal NIAKO_RS31260 3f343e25a18e413fd44ac2b3d75cbd46 505 SUPERFAMILY SSF75005 23 345 2.04E-94 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 PANTHER PTHR11082:SF25 3 324 3.6E-129 T 23-04-2016 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 PANTHER PTHR11082 3 324 3.6E-129 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 PIRSF PIRSF006621 1 329 2.6E-98 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 323 1.2E-103 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 Pfam PF01207 Dihydrouridine synthase (Dus) 16 321 3.1E-88 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 Gene3D G3DSA:3.20.20.70 13 248 2.9E-78 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 SUPERFAMILY SSF51395 13 322 4.21E-84 T 23-04-2016 NIAKO_RS32555 ee9479ea0c6712e27a3b7cd65800ea39 346 Gene3D G3DSA:1.10.1200.80 255 324 1.6E-22 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 ProSitePatterns PS00323 Ribosomal protein S19 signature. 54 78 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 SUPERFAMILY SSF54570 3 85 4.45E-31 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 Pfam PF00203 Ribosomal protein S19 3 84 2.0E-34 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 PANTHER PTHR11880 1 90 2.4E-41 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 90 24.488 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 PRINTS PR00975 Ribosomal protein S19 family signature 54 66 1.5E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 PRINTS PR00975 Ribosomal protein S19 family signature 66 81 1.5E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 PRINTS PR00975 Ribosomal protein S19 family signature 34 53 1.5E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 PIRSF PIRSF002144 1 90 1.2E-30 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 7.0E-41 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS22980 1340b14391fdd0c5bad89d5191498282 90 Gene3D G3DSA:3.30.860.10 1 89 1.4E-37 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PANTHER PTHR32063 1 1050 0.0 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82714 727 809 4.32E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:1.20.1640.10 293 507 2.1E-53 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82866 836 1032 1.31E-41 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 569 675 7.85E-23 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PANTHER PTHR32063:SF11 1 1050 0.0 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:3.30.70.1430 39 140 4.4E-26 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:1.10.3850.10 818 1034 1.8E-53 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 276 329 2.62E-18 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:3.30.70.1430 572 675 3.8E-24 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 137 183 2.62E-18 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:3.30.2090.10 726 809 2.3E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Gene3D G3DSA:3.30.2090.10 183 274 2.0E-23 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82866 298 499 5.62E-47 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 813 862 5.13E-19 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.5E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 Pfam PF00873 AcrB/AcrD/AcrF family 2 1032 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1048 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 676 726 5.13E-19 T 23-04-2016 NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82714 185 273 2.62E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19790 e0974e4c27c7290f73c1ff625954f409 1054 SUPERFAMILY SSF82693 39 132 1.78E-22 T 23-04-2016 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SUPERFAMILY SSF47384 261 329 3.34E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 PANTHER PTHR24423 113 482 2.3E-65 T 23-04-2016 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Pfam PF00072 Response regulator receiver domain 10 120 5.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Pfam PF00989 PAS fold 142 249 9.0E-11 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Gene3D G3DSA:3.30.450.20 137 250 5.3E-20 T 23-04-2016 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SUPERFAMILY SSF55874 324 479 2.62E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 480 6.4E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SMART SM00387 375 481 1.2E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Gene3D G3DSA:3.30.565.10 319 481 1.2E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 7.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 7.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 7.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 7.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SMART SM00091 141 207 1.7E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Gene3D G3DSA:3.40.50.2300 8 136 1.5E-21 T 23-04-2016 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SUPERFAMILY SSF52172 8 147 5.55E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 329 6.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SMART SM00388 267 333 6.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 Gene3D G3DSA:1.10.287.130 263 318 4.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SUPERFAMILY SSF55785 128 250 1.1E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 258 3.7E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28730 0a6e6a43fd3e2fd74498937a0bc6f82b 486 SMART SM00448 8 123 8.3E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 Gene3D G3DSA:3.40.640.10 11 253 4.6E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 PIRSF PIRSF001434 2 388 1.3E-118 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 SUPERFAMILY SSF53383 24 385 8.02E-93 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 197 211 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 PANTHER PTHR11808 10 388 7.2E-135 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 384 6.6E-106 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS33700 ea808f28d19fc930bac2de63a4c47009 388 Gene3D G3DSA:3.90.1150.10 254 386 2.2E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 SUPERFAMILY SSF89919 2 114 1.44E-20 T 23-04-2016 IPR023799 Ribosome-binding factor A domain NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 Gene3D G3DSA:3.30.300.20 4 119 8.4E-21 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 118 15.658 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 98 2.0E-9 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 Pfam PF02033 Ribosome-binding factor A 6 111 8.7E-20 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 4.9E-16 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NIAKO_RS28125 4901ae2af62ed07cbac79a5782d4c472 123 PANTHER PTHR33515 1 122 2.8E-18 T 23-04-2016 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SMART SM00387 405 519 2.5E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Gene3D G3DSA:3.30.565.10 366 519 3.4E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 129 1.1E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 272 1.9E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 5.69E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 5.69E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 5.69E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 5.69E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Gene3D G3DSA:1.10.287.130 288 359 4.4E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 PANTHER PTHR24423 8 519 4.9E-83 T 23-04-2016 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 518 8.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 363 2.2E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Gene3D G3DSA:3.30.450.20 7 124 1.9E-16 T 23-04-2016 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Pfam PF08448 PAS fold 14 125 3.5E-10 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Pfam PF08448 PAS fold 158 264 1.2E-13 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SUPERFAMILY SSF55785 138 263 3.14E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 Gene3D G3DSA:3.30.450.20 152 281 1.4E-19 T 23-04-2016 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SUPERFAMILY SSF55785 8 122 1.92E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SUPERFAMILY SSF47384 282 363 1.43E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SUPERFAMILY SSF55874 362 517 1.83E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SMART SM00091 150 217 2.4E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SMART SM00091 6 72 1.4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37170 e81acd7766c86f04fb48714515a75258 522 SMART SM00388 296 364 2.9E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS23705 44b839689ccc653d405f374f8f2f173c 189 SUPERFAMILY SSF51206 5 141 6.94E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS23705 44b839689ccc653d405f374f8f2f173c 189 Gene3D G3DSA:2.60.120.10 1 155 4.0E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS23705 44b839689ccc653d405f374f8f2f173c 189 PANTHER PTHR24567:SF33 10 189 2.4E-21 T 23-04-2016 NIAKO_RS23705 44b839689ccc653d405f374f8f2f173c 189 Pfam PF00027 Cyclic nucleotide-binding domain 31 115 3.0E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS23705 44b839689ccc653d405f374f8f2f173c 189 PANTHER PTHR24567 10 189 2.4E-21 T 23-04-2016 NIAKO_RS09440 a51643d4a1acbe3be6630ae496735c9e 167 PANTHER PTHR36929:SF1 16 167 6.5E-24 T 23-04-2016 NIAKO_RS09440 a51643d4a1acbe3be6630ae496735c9e 167 SUPERFAMILY SSF55961 13 164 5.18E-35 T 23-04-2016 NIAKO_RS09440 a51643d4a1acbe3be6630ae496735c9e 167 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 27 162 5.9E-18 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS09440 a51643d4a1acbe3be6630ae496735c9e 167 PANTHER PTHR36929 16 167 6.5E-24 T 23-04-2016 NIAKO_RS09440 a51643d4a1acbe3be6630ae496735c9e 167 Gene3D G3DSA:3.30.530.20 6 164 1.1E-39 T 23-04-2016 IPR023393 START-like domain NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 Gene3D G3DSA:3.90.226.10 21 123 3.1E-17 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 Gene3D G3DSA:3.90.226.10 159 192 3.1E-17 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 SUPERFAMILY SSF141322 357 423 1.83E-9 T 23-04-2016 NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 PANTHER PTHR33507:SF1 1 426 8.1E-129 T 23-04-2016 NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 PANTHER PTHR33507 1 426 8.1E-129 T 23-04-2016 NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 Gene3D G3DSA:2.40.50.140 367 423 9.3E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 SUPERFAMILY SSF52096 20 185 1.12E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 Pfam PF00574 Clp protease 25 176 4.5E-5 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS31160 b3c052a8dbf17c696b4a0eda92662413 429 Pfam PF01957 NfeD-like C-terminal, partner-binding 284 423 5.2E-27 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Gene3D G3DSA:3.40.50.1000 2 155 1.9E-33 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 PANTHER PTHR23133:SF2 9 97 5.4E-133 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 PANTHER PTHR23133:SF2 185 379 5.4E-133 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 148 9.4E-32 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 341 353 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 151 4.5E-49 T 23-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 150 7.2E-19 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 218 359 5.2E-62 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Pfam PF13242 HAD-hyrolase-like 104 147 8.4E-5 T 23-04-2016 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 SUPERFAMILY SSF54211 275 363 6.7E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 SUPERFAMILY SSF54211 189 273 3.54E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Gene3D G3DSA:3.30.230.40 280 379 2.9E-30 T 23-04-2016 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 PANTHER PTHR23133 9 97 5.4E-133 T 23-04-2016 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 PANTHER PTHR23133 185 379 5.4E-133 T 23-04-2016 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 248 261 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 SUPERFAMILY SSF56784 3 149 3.48E-32 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 189 379 36.762 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NIAKO_RS22055 38b8530dac0502fb515043844054d90f 379 Gene3D G3DSA:3.30.230.40 189 275 8.1E-37 T 23-04-2016 NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 PANTHER PTHR34406:SF1 4 187 4.3E-50 T 23-04-2016 NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 Pfam PF04264 YceI-like domain 23 187 4.0E-45 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 Gene3D G3DSA:2.40.128.110 20 189 1.1E-55 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 PANTHER PTHR34406 4 187 4.3E-50 T 23-04-2016 NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 SMART SM00867 22 188 1.8E-58 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35645 7c6926bf21737ecc04f8f2a1e168b49e 190 SUPERFAMILY SSF101874 20 189 4.97E-52 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 Gene3D G3DSA:2.60.40.10 37 118 9.5E-14 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 Pfam PF01833 IPT/TIG domain 39 117 1.7E-9 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 Pfam PF01436 NHL repeat 404 430 4.0E-4 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 SUPERFAMILY SSF81296 37 117 5.32E-12 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 SUPERFAMILY SSF63829 153 433 8.83E-25 T 23-04-2016 NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 PANTHER PTHR13833 1 434 2.0E-24 T 23-04-2016 NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 Gene3D G3DSA:2.120.10.30 127 433 4.8E-46 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15935 f32265733056858bf7032e4214841dc3 434 PANTHER PTHR13833:SF48 1 434 2.0E-24 T 23-04-2016 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Gene3D G3DSA:1.10.40.30 407 463 1.7E-29 T 23-04-2016 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.1E-35 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 1.1E-35 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.1E-35 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.1E-35 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Pfam PF00206 Lyase 11 344 4.5E-111 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Gene3D G3DSA:1.20.200.10 141 405 7.6E-105 T 23-04-2016 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 463 1.7E-230 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Gene3D G3DSA:1.10.275.10 1 140 4.7E-58 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Pfam PF10415 Fumarase C C-terminus 410 463 2.2E-23 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 464 87.538 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 SUPERFAMILY SSF48557 3 462 7.85E-152 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PANTHER PTHR11444 1 463 1.7E-246 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS27720 5426581cdb91d00dad944a559798c97d 465 PANTHER PTHR11444:SF1 1 463 1.7E-246 T 23-04-2016 NIAKO_RS22050 3bddf91962d5d7e9533b978a98ee6034 142 SUPERFAMILY SSF46626 8 134 1.55E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS22050 3bddf91962d5d7e9533b978a98ee6034 142 PANTHER PTHR35008:SF5 29 140 3.8E-14 T 23-04-2016 NIAKO_RS22050 3bddf91962d5d7e9533b978a98ee6034 142 PANTHER PTHR35008 29 140 3.8E-14 T 23-04-2016 NIAKO_RS22050 3bddf91962d5d7e9533b978a98ee6034 142 Gene3D G3DSA:1.10.760.10 5 139 6.4E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS22050 3bddf91962d5d7e9533b978a98ee6034 142 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 118 7.4E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS17180 470f48914bf0c3a2425dd480d208361f 707 PANTHER PTHR12872 24 690 7.9E-185 T 23-04-2016 IPR007781 Alpha-N-acetylglucosaminidase KEGG: 00531+3.2.1.50 NIAKO_RS17180 470f48914bf0c3a2425dd480d208361f 707 Pfam PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 23 102 2.7E-18 T 23-04-2016 IPR024240 Alpha-N-acetylglucosaminidase, N-terminal KEGG: 00531+3.2.1.50 NIAKO_RS17180 470f48914bf0c3a2425dd480d208361f 707 Pfam PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 445 695 6.5E-59 T 23-04-2016 IPR024732 Alpha-N-acetylglucosaminidase, C-terminal KEGG: 00531+3.2.1.50 NIAKO_RS17180 470f48914bf0c3a2425dd480d208361f 707 Pfam PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 117 437 3.8E-118 T 23-04-2016 IPR024733 Alpha-N-acetylglucosaminidase, tim-barrel domain KEGG: 00531+3.2.1.50 NIAKO_RS17180 470f48914bf0c3a2425dd480d208361f 707 PANTHER PTHR12872:SF1 24 690 7.9E-185 T 23-04-2016 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 PIRSF PIRSF002122 2 155 1.3E-52 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 SUPERFAMILY SSF47973 3 151 1.14E-54 T 23-04-2016 IPR023798 Ribosomal protein S7 domain NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 8.0E-59 T 23-04-2016 IPR023798 Ribosomal protein S7 domain NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 32.095 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 PANTHER PTHR11205 13 155 6.4E-69 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 154 3.1E-61 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23060 ced0a05481e2a841be285de0302e902d 155 Gene3D G3DSA:1.10.455.10 11 154 5.4E-58 T 23-04-2016 IPR023798 Ribosomal protein S7 domain NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 114 65.3 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 PIRSF PIRSF006246 1 114 7.1E-48 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 Pfam PF02261 Aspartate decarboxylase 1 113 9.4E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 113 9.4E-49 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 PANTHER PTHR21012:SF0 2 114 4.5E-59 T 23-04-2016 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 4.0E-32 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 PANTHER PTHR21012 2 114 4.5E-59 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 SUPERFAMILY SSF50692 1 113 4.16E-46 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain NIAKO_RS07490 0b8a3982a6a3dc82118761626abcab06 114 Gene3D G3DSA:2.40.40.20 1 113 1.6E-51 T 23-04-2016 NIAKO_RS01290 85b235d6fe3b16482631ffc3368a5113 70 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 61 3.6E-30 T 23-04-2016 IPR019240 Protein of unknown function DUF2196 NIAKO_RS01290 85b235d6fe3b16482631ffc3368a5113 70 PANTHER PTHR40069 1 61 4.6E-21 T 23-04-2016 NIAKO_RS01290 85b235d6fe3b16482631ffc3368a5113 70 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 61 2.6E-28 T 23-04-2016 IPR019240 Protein of unknown function DUF2196 NIAKO_RS01290 85b235d6fe3b16482631ffc3368a5113 70 PANTHER PTHR40069:SF1 1 61 4.6E-21 T 23-04-2016 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SUPERFAMILY SSF48452 29 240 4.68E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Gene3D G3DSA:1.25.40.10 22 90 1.2E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Gene3D G3DSA:1.25.40.10 91 162 3.5E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SMART SM00028 250 283 210.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SMART SM00028 114 147 0.034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SMART SM00028 286 319 34.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SMART SM00028 47 80 25.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 PANTHER PTHR23083 18 347 4.5E-19 T 23-04-2016 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 PANTHER PTHR23083:SF6 18 347 4.5E-19 T 23-04-2016 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Pfam PF13181 Tetratricopeptide repeat 119 143 0.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Pfam PF13181 Tetratricopeptide repeat 53 79 0.08 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Gene3D G3DSA:1.25.40.10 266 362 1.6E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 Gene3D G3DSA:1.25.40.10 163 265 1.6E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19855 58157afb4f8c62a66dac0bb30f8790ab 372 SUPERFAMILY SSF48452 226 349 7.59E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 Gene3D G3DSA:3.90.1150.10 297 429 3.7E-56 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 429 50.417 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 Gene3D G3DSA:3.40.640.10 35 296 2.5E-95 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 Pfam PF00464 Serine hydroxymethyltransferase 8 398 6.3E-169 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 PIRSF PIRSF000412 5 432 1.7E-163 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 PANTHER PTHR11680 10 428 4.5E-241 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 SUPERFAMILY SSF53383 7 429 8.68E-172 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS36200 3baaf876428266f974b096d5f70f83b5 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 PANTHER PTHR23416 26 156 3.6E-31 T 23-04-2016 NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 SUPERFAMILY SSF51161 40 164 3.33E-32 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 PIRSF PIRSF000441 1 180 8.5E-37 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 106 6.5E-4 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 3.4E-11 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 Gene3D G3DSA:2.160.10.10 70 164 3.1E-26 T 23-04-2016 NIAKO_RS26200 08dc7fce7b3fb05fab6407c655d50870 183 PANTHER PTHR23416:SF66 26 156 3.6E-31 T 23-04-2016 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 PRINTS PR01021 OMPA domain signature 456 472 2.7E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 PRINTS PR01021 OMPA domain signature 410 432 2.7E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 PRINTS PR01021 OMPA domain signature 441 456 2.7E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 SUPERFAMILY SSF53850 82 289 2.34E-24 T 23-04-2016 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 PANTHER PTHR30128 410 526 6.4E-23 T 23-04-2016 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 Pfam PF09084 NMT1/THI5 like 83 275 4.8E-14 T 23-04-2016 IPR015168 SsuA/THI5-like NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 Gene3D G3DSA:3.40.190.10 150 233 8.1E-15 T 23-04-2016 NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 SUPERFAMILY SSF103088 400 514 1.44E-22 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 Pfam PF00691 OmpA family 410 503 5.9E-18 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07625 78d87998fedc063c2890f3f1fc4f9334 526 Gene3D G3DSA:3.30.1330.60 399 516 2.1E-26 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 SUPERFAMILY SSF88659 96 162 4.8E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 Pfam PF08281 Sigma-70, region 4 105 157 9.0E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 161 1.4E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 PANTHER PTHR30173:SF20 3 164 3.1E-37 T 23-04-2016 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 Gene3D G3DSA:1.10.1740.10 3 88 2.1E-15 T 23-04-2016 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 Pfam PF04542 Sigma-70 region 2 10 77 5.1E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 Gene3D G3DSA:1.10.10.10 100 164 7.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 PANTHER PTHR30173 3 164 3.1E-37 T 23-04-2016 NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 6 161 3.6E-40 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS19310 5fca2521c552452ec205af09c0a0a2f0 179 SUPERFAMILY SSF88946 3 85 1.84E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32685 2a3217a9d8c23b5635bf2e4bea6230fa 175 SUPERFAMILY SSF109854 6 165 5.68E-22 T 23-04-2016 NIAKO_RS32685 2a3217a9d8c23b5635bf2e4bea6230fa 175 Pfam PF12867 DinB superfamily 32 160 3.9E-8 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS32685 2a3217a9d8c23b5635bf2e4bea6230fa 175 Gene3D G3DSA:1.20.120.450 25 163 2.7E-15 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 PANTHER PTHR30469 8 357 1.1E-66 T 23-04-2016 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 PANTHER PTHR30469:SF15 8 357 1.1E-66 T 23-04-2016 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 SUPERFAMILY SSF111369 45 273 3.53E-24 T 23-04-2016 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 Gene3D G3DSA:2.40.50.100 163 194 1.2E-15 T 23-04-2016 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 Gene3D G3DSA:2.40.50.100 55 88 1.2E-15 T 23-04-2016 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 355 9.1E-59 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS04090 d78d61d0170d77917dca4ec461447d62 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 268 2.1E-21 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS02280 6ffb5e8cff8f9dc463e91a2a3e382d55 648 PANTHER PTHR35861:SF1 434 640 4.0E-53 T 23-04-2016 NIAKO_RS02280 6ffb5e8cff8f9dc463e91a2a3e382d55 648 Pfam PF04984 Phage tail sheath protein 437 641 3.4E-31 T 23-04-2016 IPR007067 Tail sheath protein NIAKO_RS02280 6ffb5e8cff8f9dc463e91a2a3e382d55 648 PANTHER PTHR35861 434 640 4.0E-53 T 23-04-2016 NIAKO_RS15725 2124cf1b5865545bfe7d1403990b887c 392 Gene3D G3DSA:3.30.450.20 267 383 7.7E-10 T 23-04-2016 NIAKO_RS15725 2124cf1b5865545bfe7d1403990b887c 392 Gene3D G3DSA:3.30.450.20 127 250 3.0E-5 T 23-04-2016 NIAKO_RS15725 2124cf1b5865545bfe7d1403990b887c 392 SUPERFAMILY SSF55785 246 353 2.28E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15725 2124cf1b5865545bfe7d1403990b887c 392 Pfam PF13188 PAS domain 271 333 0.001 T 23-04-2016 IPR000014 PAS domain NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Gene3D G3DSA:3.40.50.1700 395 474 7.6E-72 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Gene3D G3DSA:3.40.50.1700 507 660 7.6E-72 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 SUPERFAMILY SSF51445 22 407 6.21E-99 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Pfam PF14310 Fibronectin type III-like domain 704 773 7.9E-22 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 43 369 8.8E-67 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 SUPERFAMILY SSF52279 408 475 9.42E-53 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 SUPERFAMILY SSF52279 508 660 9.42E-53 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Gene3D G3DSA:3.20.20.300 22 380 1.2E-106 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620 20 58 1.3E-269 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620 88 482 1.3E-269 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620 500 785 1.3E-269 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PRINTS PR00133 Glycosyl hydrolase family 3 signature 133 152 4.9E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PRINTS PR00133 Glycosyl hydrolase family 3 signature 218 234 4.9E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PRINTS PR00133 Glycosyl hydrolase family 3 signature 289 307 4.9E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PRINTS PR00133 Glycosyl hydrolase family 3 signature 110 126 4.9E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PRINTS PR00133 Glycosyl hydrolase family 3 signature 179 195 4.9E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 408 657 4.4E-59 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 289 306 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 SMART SM01217 704 773 1.5E-31 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620:SF37 20 58 1.3E-269 T 23-04-2016 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620:SF37 88 482 1.3E-269 T 23-04-2016 NIAKO_RS13190 e1e4c59538e1d50e068432827e40e1f8 785 PANTHER PTHR30620:SF37 500 785 1.3E-269 T 23-04-2016 NIAKO_RS04450 97062d1d9fe0e5ff00a5889373fbd4e5 254 Gene3D G3DSA:1.25.40.10 41 148 2.8E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04450 97062d1d9fe0e5ff00a5889373fbd4e5 254 PANTHER PTHR16056:SF3 79 253 2.6E-26 T 23-04-2016 NIAKO_RS04450 97062d1d9fe0e5ff00a5889373fbd4e5 254 PANTHER PTHR16056 79 253 2.6E-26 T 23-04-2016 NIAKO_RS04450 97062d1d9fe0e5ff00a5889373fbd4e5 254 Gene3D G3DSA:1.25.40.10 149 231 4.1E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04450 97062d1d9fe0e5ff00a5889373fbd4e5 254 SUPERFAMILY SSF48452 82 225 8.15E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 2.3E-11 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 204 239 2.6E-5 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 PANTHER PTHR22572:SF117 103 277 1.5E-47 T 23-04-2016 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 PANTHER PTHR22572 103 277 1.5E-47 T 23-04-2016 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 29 91 2.0E-11 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 Gene3D G3DSA:2.160.10.10 103 191 3.0E-24 T 23-04-2016 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 Gene3D G3DSA:2.160.10.10 192 289 7.1E-23 T 23-04-2016 NIAKO_RS32620 03e5c4f3a77d79722bef50c5c97ec873 315 SUPERFAMILY SSF51161 36 294 5.56E-64 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS00620 b32736da20d81d731b931626a5b0d513 152 PANTHER PTHR23091 11 151 1.1E-29 T 23-04-2016 NIAKO_RS00620 b32736da20d81d731b931626a5b0d513 152 SUPERFAMILY SSF55729 5 150 3.67E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS00620 b32736da20d81d731b931626a5b0d513 152 Pfam PF13673 Acetyltransferase (GNAT) domain 46 146 1.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS00620 b32736da20d81d731b931626a5b0d513 152 PANTHER PTHR23091:SF275 11 151 1.1E-29 T 23-04-2016 NIAKO_RS00620 b32736da20d81d731b931626a5b0d513 152 Gene3D G3DSA:3.40.630.30 7 147 2.2E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 Pfam PF02607 B12 binding domain 93 160 1.9E-7 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.1E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 Gene3D G3DSA:3.40.50.280 174 268 1.5E-6 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 SMART SM00422 4 73 0.001 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 SUPERFAMILY SSF46955 4 90 2.01E-13 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 Gene3D G3DSA:1.10.1660.10 4 96 1.7E-12 T 23-04-2016 NIAKO_RS33410 2d9c74832e97fb947eb69ccbd50fae42 292 SUPERFAMILY SSF52242 174 267 2.2E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS02365 50a360560200682ee573bc015de55220 210 Gene3D G3DSA:2.30.110.10 18 207 2.5E-61 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS02365 50a360560200682ee573bc015de55220 210 PANTHER PTHR34071 8 196 1.5E-46 T 23-04-2016 NIAKO_RS02365 50a360560200682ee573bc015de55220 210 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 19 161 7.1E-38 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related NIAKO_RS02365 50a360560200682ee573bc015de55220 210 SUPERFAMILY SSF50475 10 183 1.57E-49 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS02365 50a360560200682ee573bc015de55220 210 PANTHER PTHR34071:SF2 8 196 1.5E-46 T 23-04-2016 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 Pfam PF02687 FtsX-like permease family 689 797 2.1E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 Pfam PF02687 FtsX-like permease family 300 412 4.0E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 PANTHER PTHR30572:SF4 298 370 2.7E-70 T 23-04-2016 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 PANTHER PTHR30572:SF4 412 809 2.7E-70 T 23-04-2016 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 PANTHER PTHR30572 298 370 2.7E-70 T 23-04-2016 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 PANTHER PTHR30572 412 809 2.7E-70 T 23-04-2016 NIAKO_RS03785 2c30941359efdf57bbf97043c4761b92 809 Pfam PF12704 MacB-like periplasmic core domain 19 247 2.8E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 344 4.0E-17 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Gene3D G3DSA:3.30.70.270 67 162 1.2E-23 T 23-04-2016 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 PANTHER PTHR11076 2 342 3.4E-107 T 23-04-2016 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 SUPERFAMILY SSF100879 241 344 4.91E-24 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Pfam PF00817 impB/mucB/samB family 11 154 2.2E-46 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Hamap MF_01113 DNA polymerase IV [dinB]. 4 348 32.79 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 SUPERFAMILY SSF56672 3 233 4.71E-77 T 23-04-2016 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Gene3D G3DSA:1.10.150.20 169 234 5.1E-19 T 23-04-2016 NIAKO_RS34655 b2c99df939c00e6e622d4dc5dba593a2 380 Gene3D G3DSA:3.30.1490.100 241 345 9.0E-24 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 SMART SM00876 257 360 3.9E-32 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 257 359 1.4E-24 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 PANTHER PTHR22976:SF17 1 369 2.9E-184 T 23-04-2016 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 SUPERFAMILY SSF102114 37 362 3.92E-51 T 23-04-2016 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 Pfam PF04055 Radical SAM superfamily 82 226 7.0E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 PANTHER PTHR22976 1 369 2.9E-184 T 23-04-2016 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 Gene3D G3DSA:3.20.20.70 38 362 2.3E-47 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17580 6c4190fd4a88743e287d0b7bd96e4e77 379 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 367 2.7E-163 T 23-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Gene3D G3DSA:2.30.42.10 363 427 9.2E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Pfam PF13180 PDZ domain 274 344 4.0E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PANTHER PTHR22939 27 344 6.8E-102 T 23-04-2016 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Gene3D G3DSA:2.40.10.10 25 141 1.6E-29 T 23-04-2016 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Gene3D G3DSA:2.30.42.10 255 345 2.5E-24 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 SUPERFAMILY SSF50156 252 344 3.02E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 SUPERFAMILY SSF50494 1 261 1.07E-56 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PANTHER PTHR22939:SF79 27 344 6.8E-102 T 23-04-2016 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 293 305 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 147 171 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 86 98 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 2.6E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 SMART SM00228 268 335 6.9E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Pfam PF13365 Trypsin-like peptidase domain 77 214 2.9E-29 T 23-04-2016 NIAKO_RS11230 fa8194a0d4edd9351136c86a6bc394aa 452 Gene3D G3DSA:2.40.10.10 142 254 1.2E-40 T 23-04-2016 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 Pfam PF07702 UTRA domain 107 234 1.5E-25 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 SUPERFAMILY SSF46785 6 80 5.06E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 Gene3D G3DSA:1.10.10.10 5 72 4.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 5.3E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 SUPERFAMILY SSF64288 64 243 2.67E-37 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 SMART SM00345 17 76 1.5E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 SMART SM00866 97 235 1.1E-18 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 Gene3D G3DSA:3.40.1410.10 73 241 1.8E-38 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 PANTHER PTHR11751 16 78 6.9E-17 T 23-04-2016 NIAKO_RS02595 3c703b42e2975ff3d145695e72a31167 244 PANTHER PTHR11751 125 148 6.9E-17 T 23-04-2016 NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 27 293 7.4E-76 T 23-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 PANTHER PTHR35092:SF2 23 302 2.1E-109 T 23-04-2016 NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 PANTHER PTHR35092 23 302 2.1E-109 T 23-04-2016 NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 PIRSF PIRSF006779 22 298 8.9E-100 T 23-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 Gene3D G3DSA:2.40.30.90 188 295 1.3E-24 T 23-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 SUPERFAMILY SSF101852 190 296 7.45E-24 T 23-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal NIAKO_RS10215 c707604e239f94fdae59f45504b2b379 303 SUPERFAMILY SSF102522 26 183 1.83E-56 T 23-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 SUPERFAMILY SSF52833 331 483 9.93E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 ProSitePatterns PS00194 Thioredoxin family active site. 360 378 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 PANTHER PTHR10681:SF68 312 484 2.3E-19 T 23-04-2016 NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 Pfam PF00578 AhpC/TSA family 333 460 1.4E-18 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 PANTHER PTHR10681 312 484 2.3E-19 T 23-04-2016 NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 Gene3D G3DSA:3.40.30.10 12 27 3.2E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36885 cd6a52e83c5a29672a234577add1d03b 486 Gene3D G3DSA:3.40.30.10 329 480 3.2E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 SUPERFAMILY SSF51735 4 145 8.73E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 SUPERFAMILY SSF51735 177 348 8.73E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 Gene3D G3DSA:3.40.50.720 237 287 1.9E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 Gene3D G3DSA:3.40.50.720 4 198 1.9E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 Pfam PF08338 Domain of unknown function (DUF1731) 300 347 1.8E-12 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 PANTHER PTHR11092 1 145 1.5E-76 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 PANTHER PTHR11092 177 353 1.5E-76 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 PANTHER PTHR11092:SF0 1 145 1.5E-76 T 23-04-2016 NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 PANTHER PTHR11092:SF0 177 353 1.5E-76 T 23-04-2016 NIAKO_RS27240 8206afda92c711c7f71821f961b1a417 359 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 150 1.9E-11 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SMART SM00387 645 735 1.7E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Gene3D G3DSA:3.30.565.10 619 735 3.3E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF07730 Histidine kinase 543 602 2.8E-9 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF13426 PAS domain 150 260 2.7E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SUPERFAMILY SSF55874 612 735 8.38E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 PANTHER PTHR24421:SF1 500 735 7.0E-39 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF08448 PAS fold 21 127 5.9E-5 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF08448 PAS fold 285 388 9.8E-6 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 393 2.1E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 411 521 3.6E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 269 1.9E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF08447 PAS fold 421 507 8.8E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Gene3D G3DSA:3.30.450.20 15 125 4.1E-7 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SUPERFAMILY SSF55785 10 102 3.49E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 PANTHER PTHR24421 500 735 7.0E-39 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SUPERFAMILY SSF55785 406 516 1.42E-17 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Gene3D G3DSA:3.30.450.20 143 259 1.2E-11 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SUPERFAMILY SSF55785 259 384 1.54E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Gene3D G3DSA:3.30.450.20 260 358 1.9E-10 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 649 735 1.7E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SMART SM00091 139 207 0.0094 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SMART SM00091 274 339 0.094 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SMART SM00091 14 79 0.0093 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SMART SM00091 398 466 0.012 T 23-04-2016 IPR000014 PAS domain NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 Gene3D G3DSA:3.30.450.20 379 532 4.3E-25 T 23-04-2016 NIAKO_RS24615 4effa80b783c4d471a0f70b7f8060451 735 SUPERFAMILY SSF55785 142 260 1.93E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 Gene3D G3DSA:3.30.1120.10 402 462 5.0E-7 T 23-04-2016 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 SUPERFAMILY SSF53649 4 495 4.36E-118 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 PANTHER PTHR10342 187 494 2.6E-149 T 23-04-2016 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 PANTHER PTHR10342:SF241 187 494 2.6E-149 T 23-04-2016 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 PANTHER PTHR10342:SF241 6 162 2.6E-149 T 23-04-2016 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 PANTHER PTHR10342 6 162 2.6E-149 T 23-04-2016 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 Gene3D G3DSA:3.40.720.10 5 401 4.6E-97 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18415 dbed89ceccc8de72d60a18cd998282ca 501 Pfam PF00884 Sulfatase 7 348 1.9E-65 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS10560 98b5d590f4065a019bcada992ed1ed70 297 Pfam PF13557 Putative MetA-pathway of phenol degradation 58 237 2.1E-12 T 23-04-2016 IPR025737 MetA-pathway of phenol degradation, putative NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 SUPERFAMILY SSF158446 5 58 2.35E-17 T 23-04-2016 NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 11 59 2.3E-14 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 PANTHER PTHR38471:SF2 3 58 2.5E-13 T 23-04-2016 NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 PANTHER PTHR38471 3 58 2.5E-13 T 23-04-2016 NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 Pfam PF05635 23S rRNA-intervening sequence protein 7 59 3.3E-17 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS32540 845b018dd8ae4056ece6eeafe13f6b27 69 Gene3D G3DSA:1.20.1440.60 5 58 2.3E-16 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 Gene3D G3DSA:2.60.120.280 34 179 3.5E-27 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 PANTHER PTHR11019:SF65 50 300 1.3E-36 T 23-04-2016 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 Gene3D G3DSA:1.10.10.60 192 246 1.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 SUPERFAMILY SSF51215 36 179 2.35E-27 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 PANTHER PTHR11019 50 300 1.3E-36 T 23-04-2016 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 SUPERFAMILY SSF46689 247 297 2.2E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 Pfam PF12833 Helix-turn-helix domain 216 295 2.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 SUPERFAMILY SSF46689 195 243 3.45E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 Gene3D G3DSA:1.10.10.60 247 297 1.4E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 Pfam PF02311 AraC-like ligand binding domain 45 150 6.8E-17 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 SMART SM00342 210 293 3.5E-29 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 1.3E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17010 e29ccc79264f8b9c26a67ce9fb9d5312 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 1.3E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 PANTHER PTHR35580 220 630 9.9E-24 T 23-04-2016 NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Gene3D G3DSA:2.120.10.30 390 623 2.5E-17 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 PANTHER PTHR35580:SF1 220 630 9.9E-24 T 23-04-2016 NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 SUPERFAMILY SSF63829 470 623 1.5E-9 T 23-04-2016 NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Gene3D G3DSA:2.120.10.30 214 389 1.7E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 428 455 2.3E-4 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 320 353 5.7E-7 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 534 567 2.8E-5 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 273 300 1.4E-5 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 372 405 1.9E-6 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 Pfam PF06739 Beta-propeller repeat 586 623 1.9E-4 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS21170 1102872996a7ac15b54c2cb334be2253 753 SUPERFAMILY SSF101898 224 508 9.16E-20 T 23-04-2016 NIAKO_RS06340 9181724cb1af28c6e5dadc7523ce1ddb 148 PANTHER PTHR36305 1 148 1.2E-34 T 23-04-2016 NIAKO_RS06340 9181724cb1af28c6e5dadc7523ce1ddb 148 PIRSF PIRSF006162 1 148 4.5E-32 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 NIAKO_RS06340 9181724cb1af28c6e5dadc7523ce1ddb 148 SUPERFAMILY SSF101307 4 141 2.22E-25 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 NIAKO_RS06340 9181724cb1af28c6e5dadc7523ce1ddb 148 Gene3D G3DSA:1.10.3760.10 60 136 2.9E-4 T 23-04-2016 IPR027416 YutG-like domain NIAKO_RS06340 9181724cb1af28c6e5dadc7523ce1ddb 148 Pfam PF04608 Phosphatidylglycerophosphatase A 6 142 5.7E-33 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 NIAKO_RS20860 5137714847ade1df29932392094fe182 193 Gene3D G3DSA:2.40.128.110 71 187 9.8E-4 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS20860 5137714847ade1df29932392094fe182 193 SUPERFAMILY SSF101874 70 188 4.58E-7 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS17595 296e72c750d4f4a899d9ab54d3d94316 251 SUPERFAMILY SSF53613 5 238 4.42E-45 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS17595 296e72c750d4f4a899d9ab54d3d94316 251 Pfam PF08543 Phosphomethylpyrimidine kinase 15 243 3.3E-50 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 NIAKO_RS17595 296e72c750d4f4a899d9ab54d3d94316 251 Gene3D G3DSA:3.40.1190.20 6 244 2.5E-54 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS17595 296e72c750d4f4a899d9ab54d3d94316 251 PANTHER PTHR20858 5 244 8.6E-50 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 TIGRFAM TIGR01391 dnaG: DNA primase 1 418 1.3E-134 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 PANTHER PTHR30313 1 649 3.0E-130 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Gene3D G3DSA:3.40.1360.10 241 363 5.5E-43 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Pfam PF01807 CHC2 zinc finger 3 97 1.0E-37 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 SUPERFAMILY SSF56731 113 423 4.45E-84 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 PIRSF PIRSF002811 1 632 2.3E-149 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Pfam PF13155 Toprim-like 263 346 2.9E-18 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Gene3D G3DSA:3.90.580.10 1 97 1.2E-37 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Gene3D G3DSA:3.90.980.10 113 239 3.1E-33 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 SMART SM00400 33 87 6.1E-35 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Hamap MF_00974 DNA primase [dnaG]. 1 647 26.083 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 SUPERFAMILY SSF57783 1 97 1.63E-34 T 23-04-2016 NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 251 3.4E-34 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal NIAKO_RS12950 e65a009cbdb11e2deca7ed419d317e01 670 SMART SM00493 259 330 5.8E-16 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532 517 548 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532 135 489 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532 632 1156 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF49464 143 215 1.07E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 143 1157 1.6E-234 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Pfam PF13715 CarboxypepD_reg-like domain 145 226 1.2E-9 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Gene3D G3DSA:2.40.170.20 985 1030 1.4E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Gene3D G3DSA:2.40.170.20 440 904 1.4E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Gene3D G3DSA:2.60.40.1120 145 235 6.2E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532:SF57 517 548 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532:SF57 135 489 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 PANTHER PTHR11532:SF57 632 1156 3.2E-217 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Gene3D G3DSA:2.170.130.10 236 351 9.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Pfam PF07660 Secretin and TonB N terminus short domain 69 119 3.0E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF56935 552 904 1.12E-73 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF56935 433 523 1.12E-73 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF56935 1072 1156 1.12E-73 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF56935 225 365 1.12E-73 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SUPERFAMILY SSF56935 985 1031 1.12E-73 T 23-04-2016 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 319 348 6.4E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 SMART SM00965 69 121 4.4E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS35165 74671ad1bac1a33546f9eee053d39d7b 1158 Pfam PF07715 TonB-dependent Receptor Plug Domain 236 342 1.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 Gene3D G3DSA:2.60.120.260 398 464 5.0E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 478 552 3.1E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 Pfam PF10102 Domain of unknown function (DUF2341) 58 134 9.4E-10 T 23-04-2016 IPR018765 Domain of unknown function DUF2341 NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 SUPERFAMILY SSF49899 119 349 8.24E-21 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 182 343 6.0E-20 T 23-04-2016 NIAKO_RS28900 059524909a6b152931e0c2025a745829 554 Gene3D G3DSA:2.60.120.200 180 348 1.3E-15 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 SUPERFAMILY SSF89260 381 460 5.49E-6 T 23-04-2016 NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 710 780 2.9E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 SUPERFAMILY SSF55486 210 306 6.07E-8 T 23-04-2016 NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 Gene3D G3DSA:3.40.390.10 242 336 1.9E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 Gene3D G3DSA:2.60.120.380 362 465 1.1E-8 T 23-04-2016 NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 SUPERFAMILY SSF49299 493 584 8.44E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 SUPERFAMILY SSF49695 587 656 2.29E-12 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 390 456 2.9E-6 T 23-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial NIAKO_RS36350 c3d185e6f7f8f8cee7c14887b302e841 780 Gene3D G3DSA:2.60.20.10 587 679 1.5E-22 T 23-04-2016 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SUPERFAMILY SSF47226 571 584 6.33E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SUPERFAMILY SSF47226 614 684 6.33E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SMART SM00387 336 452 2.8E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 9.91E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 9.91E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 9.91E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 9.91E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 6.2E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SMART SM00448 476 588 3.2E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PANTHER PTHR24423 203 630 3.2E-142 T 23-04-2016 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SUPERFAMILY SSF55874 278 451 2.88E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 PANTHER PTHR24423:SF525 203 630 3.2E-142 T 23-04-2016 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 450 2.8E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Gene3D G3DSA:3.40.50.2300 474 592 1.2E-41 T 23-04-2016 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SUPERFAMILY SSF47384 208 289 1.84E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Gene3D G3DSA:1.20.120.160 626 720 1.5E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Gene3D G3DSA:3.30.565.10 297 450 1.8E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SMART SM00388 224 289 4.9E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Gene3D G3DSA:1.10.287.130 217 285 3.9E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Pfam PF01627 Hpt domain 635 680 1.2E-4 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 SUPERFAMILY SSF52172 474 599 3.56E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS00225 180f550786eebf9c63f21cb6c01d461e 725 Pfam PF00072 Response regulator receiver domain 478 588 8.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 SUPERFAMILY SSF51735 3 239 6.63E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PANTHER PTHR24322 156 186 7.6E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PANTHER PTHR24322 12 140 7.6E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PANTHER PTHR24322:SF413 156 186 7.6E-68 T 23-04-2016 NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PANTHER PTHR24322:SF413 12 140 7.6E-68 T 23-04-2016 NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 Gene3D G3DSA:3.40.50.720 2 232 5.4E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 Pfam PF00106 short chain dehydrogenase 8 199 7.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS21050 3cc34dc4491e52b531c00f0bbc0657e4 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 Gene3D G3DSA:3.30.360.10 161 316 1.4E-66 T 23-04-2016 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 152 5.5E-59 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 SUPERFAMILY SSF55347 152 315 3.57E-63 T 23-04-2016 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 SMART SM00846 4 152 1.8E-89 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 SUPERFAMILY SSF51735 4 168 5.57E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PIRSF PIRSF000149 2 336 7.4E-121 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PANTHER PTHR10836 1 339 4.5E-217 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.3E-59 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 Gene3D G3DSA:3.40.50.720 2 160 1.3E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 326 2.0E-132 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PANTHER PTHR10836:SF57 1 339 4.5E-217 T 23-04-2016 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.5E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 7.5E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.5E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 7.5E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS25300 faeae4266db83f19cf61d4e2099aa84e 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 7.5E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 PANTHER PTHR11808:SF36 11 390 4.2E-164 T 23-04-2016 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 388 6.6E-135 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 PANTHER PTHR11808 11 390 4.2E-164 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 Gene3D G3DSA:3.90.1150.10 255 389 3.2E-50 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 PIRSF PIRSF001434 1 390 3.0E-130 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 SUPERFAMILY SSF53383 24 389 1.39E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS34410 0b6b54988ee5bd8a92a9ceffff026491 390 Gene3D G3DSA:3.40.640.10 19 254 4.0E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS16600 578483841e6e6a8d41229de2906a0574 746 Pfam PF01734 Patatin-like phospholipase 13 314 4.6E-7 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS16600 578483841e6e6a8d41229de2906a0574 746 SUPERFAMILY SSF52151 292 323 1.46E-11 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS16600 578483841e6e6a8d41229de2906a0574 746 SUPERFAMILY SSF52151 244 265 1.46E-11 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS16600 578483841e6e6a8d41229de2906a0574 746 SUPERFAMILY SSF52151 148 206 1.46E-11 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS16600 578483841e6e6a8d41229de2906a0574 746 SUPERFAMILY SSF52151 10 117 1.46E-11 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 SUPERFAMILY SSF48208 60 337 1.16E-36 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 PANTHER PTHR12145:SF14 1 381 1.9E-34 T 23-04-2016 NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 PIRSF PIRSF021505 41 378 2.1E-49 T 23-04-2016 IPR014512 Predicted O-glycosyl hydrolase NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 Pfam PF03663 Glycosyl hydrolase family 76 34 381 2.8E-40 T 23-04-2016 IPR005198 Glycoside hydrolase, family 76 KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 Gene3D G3DSA:1.50.10.10 39 251 7.3E-21 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS04005 97acb8468474c316005eb7cddb5a56de 385 PANTHER PTHR12145 1 381 1.9E-34 T 23-04-2016 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Pfam PF00570 HRDC domain 537 603 3.2E-16 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 604 4.1E-198 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 464 3.1E-152 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Pfam PF16124 RecQ zinc-binding 343 404 4.4E-14 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SMART SM00341 533 613 3.2E-13 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SMART SM00956 411 514 8.4E-23 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Gene3D G3DSA:1.10.150.80 535 611 1.2E-16 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Gene3D G3DSA:1.10.10.10 345 514 7.2E-46 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 PANTHER PTHR13710 3 728 2.2E-242 T 23-04-2016 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SUPERFAMILY SSF46785 402 522 4.49E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SUPERFAMILY SSF47819 534 613 8.72E-20 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SMART SM00487 15 215 5.7E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Gene3D G3DSA:3.40.50.300 4 198 4.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Gene3D G3DSA:3.40.50.300 203 344 9.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SUPERFAMILY SSF52540 59 352 1.47E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Pfam PF00271 Helicase conserved C-terminal domain 226 331 2.4E-15 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 SMART SM00490 250 331 1.2E-27 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Pfam PF09382 RQC domain 406 511 8.6E-24 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 PANTHER PTHR13710:SF81 3 728 2.2E-242 T 23-04-2016 NIAKO_RS31525 7e6b88f16d00958c922914f0aba6a519 731 Pfam PF00270 DEAD/DEAH box helicase 23 185 4.8E-21 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 Pfam PF00561 alpha/beta hydrolase fold 56 160 3.0E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PANTHER PTHR10992 31 307 6.5E-48 T 23-04-2016 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PANTHER PTHR10992:SF778 31 307 6.5E-48 T 23-04-2016 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00412 Epoxide hydrolase signature 282 304 2.4E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00412 Epoxide hydrolase signature 61 79 2.4E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00412 Epoxide hydrolase signature 124 137 2.4E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 Gene3D G3DSA:3.40.50.1820 25 305 2.5E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 6.1E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 6.1E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 6.1E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS11100 01b5012dc602643a902fa3388f0a6a15 307 SUPERFAMILY SSF53474 32 305 6.77E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS02310 d4a834d963df678153950052ca2b1fbc 145 PANTHER PTHR35862 4 130 1.8E-29 T 23-04-2016 NIAKO_RS02310 d4a834d963df678153950052ca2b1fbc 145 Pfam PF04965 Gene 25-like lysozyme 28 117 7.5E-26 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD NIAKO_RS02310 d4a834d963df678153950052ca2b1fbc 145 Gene3D G3DSA:3.10.450.40 3 130 9.3E-41 T 23-04-2016 NIAKO_RS02310 d4a834d963df678153950052ca2b1fbc 145 SUPERFAMILY SSF160719 23 130 2.09E-29 T 23-04-2016 NIAKO_RS02310 d4a834d963df678153950052ca2b1fbc 145 PANTHER PTHR35862:SF2 4 130 1.8E-29 T 23-04-2016 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 SMART SM00342 160 244 4.7E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 Pfam PF12833 Helix-turn-helix domain 172 242 2.6E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 PANTHER PTHR11019 8 242 7.8E-19 T 23-04-2016 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 Gene3D G3DSA:1.10.10.60 205 242 8.6E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 PANTHER PTHR11019:SF126 8 242 7.8E-19 T 23-04-2016 NIAKO_RS03235 c2510fd609c2ace3c7d2ad9d217420ec 244 Gene3D G3DSA:1.10.10.60 147 199 8.5E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 SUPERFAMILY SSF49299 353 430 1.44E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 SUPERFAMILY SSF49299 454 522 1.44E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 Gene3D G3DSA:2.60.40.670 353 430 7.6E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 Gene3D G3DSA:2.60.40.670 453 522 1.3E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 SUPERFAMILY SSF55486 165 329 6.07E-8 T 23-04-2016 NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 Pfam PF05572 Pregnancy-associated plasma protein-A 175 332 4.4E-12 T 23-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1125 1212 1.8E-12 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS04270 f400405d7be19295fe7710a5cdb03968 1218 Pfam PF13585 C-terminal domain of CHU protein family 1125 1215 1.6E-17 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SUPERFAMILY SSF47384 168 224 4.32E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 168 220 5.5E-6 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 9.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 408 9.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 365 9.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 9.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Pfam PF01627 Hpt domain 8 92 1.3E-12 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:1.10.287.560 168 225 1.5E-10 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PANTHER PTHR22617 101 550 7.8E-129 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 409 5.6E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SUPERFAMILY SSF50341 410 538 1.7E-22 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:1.20.120.160 8 110 1.4E-27 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 PANTHER PTHR22617:SF6 101 550 7.8E-129 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:2.30.30.40 411 432 1.0E-17 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:2.30.30.40 495 538 1.0E-17 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SUPERFAMILY SSF55874 227 408 7.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SMART SM00387 270 411 1.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:2.40.50.180 443 494 6.3E-4 T 23-04-2016 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SMART SM01231 165 225 7.1E-7 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SUPERFAMILY SSF47226 8 101 9.55E-23 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SMART SM00073 1 98 3.0E-16 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Gene3D G3DSA:3.30.565.10 227 410 6.2E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 SMART SM00260 403 539 4.0E-20 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS01210 7b8e6c6d9fc4bf11d35ce03f8501ef54 550 Pfam PF01584 CheW-like domain 416 540 5.6E-17 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 SMART SM00862 148 223 1.6E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 SMART SM00448 1 112 4.2E-43 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 SUPERFAMILY SSF52172 1 172 1.04E-40 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 PANTHER PTHR26402:SF316 1 226 6.0E-97 T 23-04-2016 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 PANTHER PTHR26402 1 226 6.0E-97 T 23-04-2016 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 Gene3D G3DSA:1.10.10.10 126 226 2.0E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 3.4E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 Gene3D G3DSA:3.40.50.2300 1 120 3.5E-39 T 23-04-2016 NIAKO_RS31415 0b00682553bd6bda64043092dd9603d7 229 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 Gene3D G3DSA:1.20.1250.20 11 195 4.2E-42 T 23-04-2016 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 Gene3D G3DSA:1.20.1250.20 215 403 3.3E-18 T 23-04-2016 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 Pfam PF07690 Major Facilitator Superfamily 12 357 6.2E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 SUPERFAMILY SSF103473 9 404 1.27E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PANTHER PTHR23504:SF18 1 403 1.9E-157 T 23-04-2016 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PANTHER PTHR23504 1 403 1.9E-157 T 23-04-2016 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 107 128 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 137 159 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 306 326 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 80 104 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 341 364 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 281 302 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 165 185 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 253 273 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS32025 e72b853a1e0a7d9125c807f8f0529676 410 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.1E-63 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.9E-52 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 PANTHER PTHR10871 1 124 6.9E-60 T 23-04-2016 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.2E-30 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 Gene3D G3DSA:4.10.910.10 73 125 1.9E-27 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 PIRSF PIRSF002134 1 125 6.3E-40 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 Gene3D G3DSA:1.10.8.50 1 71 1.6E-27 T 23-04-2016 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.07 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21865 74fdfdeea54c36ba352d00b7dacc54bc 126 SUPERFAMILY SSF46946 2 123 1.08E-43 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 509 567 5.3E-10 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 426 497 4.5E-14 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 SUPERFAMILY SSF50370 425 564 6.45E-34 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 PANTHER PTHR30417 258 361 2.4E-31 T 23-04-2016 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 PANTHER PTHR30417 380 408 2.4E-31 T 23-04-2016 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 SMART SM00458 427 564 2.7E-8 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 SMART SM00644 250 396 4.5E-22 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 Gene3D G3DSA:2.80.10.50 428 563 2.2E-25 T 23-04-2016 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 259 396 3.5E-16 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 SUPERFAMILY SSF55846 248 408 3.27E-32 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 Gene3D G3DSA:3.40.80.10 245 409 2.2E-33 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 PANTHER PTHR30417:SF1 258 361 2.4E-31 T 23-04-2016 NIAKO_RS36675 99725b421cc5361a5d04b5624bd84067 591 PANTHER PTHR30417:SF1 380 408 2.4E-31 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 652 915 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 935 1144 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 581 634 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 225 424 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 457 499 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532:SF57 15 203 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 42 1146 1.9E-233 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 258 5.2E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF56935 502 868 1.28E-72 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF56935 124 282 1.28E-72 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF56935 1052 1146 1.28E-72 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF56935 967 1011 1.28E-72 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF56935 370 458 1.28E-72 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 Gene3D G3DSA:2.60.40.1120 43 121 6.3E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 Gene3D G3DSA:2.170.130.10 130 267 2.9E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 Pfam PF13715 CarboxypepD_reg-like domain 43 122 8.6E-14 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 SUPERFAMILY SSF49464 41 121 2.35E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 234 264 9.3E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 652 915 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 935 1144 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 581 634 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 225 424 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 457 499 1.9E-217 T 23-04-2016 NIAKO_RS13860 18c77bdbb556f04426c8e115cd10f288 1146 PANTHER PTHR11532 15 203 1.9E-217 T 23-04-2016 NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 Pfam PF02678 Pirin 22 125 6.6E-24 T 23-04-2016 IPR003829 Pirin, N-terminal domain NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 SUPERFAMILY SSF51182 17 281 6.23E-67 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 Gene3D G3DSA:2.60.120.10 5 253 4.5E-62 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 PIRSF PIRSF006232 1 283 1.2E-73 T 23-04-2016 IPR012093 Pirin NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 Pfam PF05726 Pirin C-terminal cupin domain 183 280 1.8E-24 T 23-04-2016 IPR008778 Pirin, C-terminal domain NIAKO_RS29055 abd9225f4b863d93f45a624e8d455e88 284 PANTHER PTHR13903 58 280 5.0E-73 T 23-04-2016 IPR012093 Pirin NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 Gene3D G3DSA:2.60.40.1120 8 70 4.4E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532 6 172 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532 567 1085 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532 192 385 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532 410 458 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532:SF57 6 172 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532:SF57 567 1085 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532:SF57 192 385 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 PANTHER PTHR11532:SF57 410 458 1.0E-166 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 Pfam PF07715 TonB-dependent Receptor Plug Domain 99 225 5.0E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 201 231 1.7E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 464 525 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 908 952 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 331 419 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 1000 1041 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 557 846 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF56935 87 249 3.4E-67 T 23-04-2016 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 7 1085 5.2E-178 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 SUPERFAMILY SSF49464 6 77 7.72E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19300 a6f54ef25a2107ee8dd3cb64b8328534 1087 Gene3D G3DSA:2.170.130.10 103 234 2.6E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02760 a9284243c3dc9cf1bdae406b0468f142 490 Pfam PF07980 SusD family 359 490 8.9E-28 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS02760 a9284243c3dc9cf1bdae406b0468f142 490 Gene3D G3DSA:1.25.40.10 206 435 4.1E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02760 a9284243c3dc9cf1bdae406b0468f142 490 SUPERFAMILY SSF48452 18 490 7.33E-91 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02760 a9284243c3dc9cf1bdae406b0468f142 490 Pfam PF14322 Starch-binding associating with outer membrane 78 220 2.8E-23 T 23-04-2016 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 PANTHER PTHR32071 1 452 6.0E-164 T 23-04-2016 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Gene3D G3DSA:3.40.50.2300 5 133 1.4E-27 T 23-04-2016 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 SMART SM00382 169 312 1.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Pfam PF00072 Response regulator receiver domain 8 122 2.1E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Pfam PF00158 Sigma-54 interaction domain 149 315 2.3E-62 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 1.2E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 SUPERFAMILY SSF52172 4 193 1.25E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Gene3D G3DSA:1.10.8.60 322 397 9.9E-20 T 23-04-2016 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Gene3D G3DSA:3.40.50.300 148 321 7.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 452 2.0E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 2.0E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 Gene3D G3DSA:1.10.10.60 399 452 1.8E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 SMART SM00448 6 122 2.0E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 SUPERFAMILY SSF46689 363 452 7.17E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05950 720dc0dcf7a90e458a683b0c4b5c3f27 452 SUPERFAMILY SSF52540 149 390 5.23E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 SUPERFAMILY SSF53067 87 390 2.64E-44 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 Pfam PF00480 ROK family 109 387 3.6E-44 T 23-04-2016 IPR000600 ROK family NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 PANTHER PTHR18964 52 269 7.8E-62 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 PANTHER PTHR18964 300 392 7.8E-62 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 Gene3D G3DSA:1.10.10.10 9 69 2.0E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 SUPERFAMILY SSF46785 8 69 3.64E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 Gene3D G3DSA:3.30.420.40 71 212 1.3E-25 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 Gene3D G3DSA:3.30.420.40 213 370 1.8E-42 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 PANTHER PTHR18964:SF123 52 269 7.8E-62 T 23-04-2016 NIAKO_RS35690 df3795981c44e386bdb984e9830befc9 405 PANTHER PTHR18964:SF123 300 392 7.8E-62 T 23-04-2016 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 SUPERFAMILY SSF50182 654 720 4.58E-17 T 23-04-2016 IPR010920 LSM domain NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 PANTHER PTHR30347 281 812 3.8E-50 T 23-04-2016 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 Pfam PF00924 Mechanosensitive ion channel 613 810 1.7E-44 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 Gene3D G3DSA:2.30.30.60 670 719 3.7E-17 T 23-04-2016 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 SUPERFAMILY SSF82689 722 810 9.68E-11 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 Gene3D G3DSA:3.30.70.100 725 809 9.7E-8 T 23-04-2016 NIAKO_RS15390 56ef0ec9707e2e0b86363835fdb25a69 812 SUPERFAMILY SSF82861 570 653 5.23E-6 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 139 4.4E-27 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 PANTHER PTHR10516 2 73 5.5E-28 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 PANTHER PTHR10516 131 141 5.5E-28 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 SUPERFAMILY SSF54534 3 141 1.14E-44 T 23-04-2016 NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 Gene3D G3DSA:3.10.50.40 3 70 1.2E-33 T 23-04-2016 NIAKO_RS22475 aa5ffc05f3b9d323dfeb245e7cc90de1 151 Gene3D G3DSA:3.10.50.40 124 141 1.2E-33 T 23-04-2016 NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 Gene3D G3DSA:2.80.10.50 300 439 1.4E-27 T 23-04-2016 NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 SUPERFAMILY SSF50370 300 438 7.83E-37 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 299 377 6.4E-17 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 384 441 2.8E-13 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 SMART SM00458 299 438 0.003 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS36375 f7453921b2b79e503cceb68d4b5aa88b 540 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 463 538 1.9E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 Gene3D G3DSA:2.70.98.50 32 406 2.3E-118 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 33 276 9.1E-67 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 PIRSF PIRSF007663 13 778 1.2E-243 T 23-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 PANTHER PTHR31084 19 770 3.8E-259 T 23-04-2016 NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 SUPERFAMILY SSF48208 278 773 1.93E-78 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS07235 f0637abf52751113ee68f32c65abb1a8 780 PANTHER PTHR31084:SF0 19 770 3.8E-259 T 23-04-2016 NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PANTHER PTHR24322 149 179 1.1E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PANTHER PTHR24322 9 133 1.1E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 SUPERFAMILY SSF51735 2 231 3.08E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 Pfam PF00106 short chain dehydrogenase 5 192 2.4E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 8.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 0.0033 T 23-04-2016 NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 5.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 5.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 Gene3D G3DSA:3.40.50.720 2 229 4.6E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04230 7f591ee8438d4bc8477f516672cdced4 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 3.1E-37 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.1E-37 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 3.1E-37 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.1E-37 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 3.1E-37 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 466 7.6E-172 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 SUPERFAMILY SSF51905 2 371 6.95E-65 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PANTHER PTHR22912:SF125 1 459 4.7E-195 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 Gene3D G3DSA:3.30.390.30 335 465 1.1E-45 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 321 2.0E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PANTHER PTHR22912 1 459 4.7E-195 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 Gene3D G3DSA:3.50.50.60 136 329 5.2E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 SUPERFAMILY SSF55424 343 465 3.44E-38 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 Gene3D G3DSA:3.50.50.60 2 135 3.2E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PIRSF PIRSF000350 1 461 9.3E-82 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.9E-63 T 23-04-2016 NIAKO_RS21495 6f33ce114bef4818873add154dfcc3f2 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.9E-63 T 23-04-2016 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 SMART SM00448 3 115 6.1E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 Gene3D G3DSA:1.10.10.60 202 247 1.6E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 SUPERFAMILY SSF46689 202 250 1.39E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 Pfam PF12833 Helix-turn-helix domain 171 249 1.6E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 SMART SM00342 165 248 7.0E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 PANTHER PTHR24423:SF486 4 157 1.3E-49 T 23-04-2016 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 Gene3D G3DSA:1.10.10.60 144 198 5.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 Gene3D G3DSA:3.40.50.2300 4 128 3.8E-36 T 23-04-2016 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 SUPERFAMILY SSF52172 4 128 2.56E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 Pfam PF00072 Response regulator receiver domain 5 113 1.9E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00165 1bc11363253fc9650103042561a0a2ad 254 PANTHER PTHR24423 4 157 1.3E-49 T 23-04-2016 NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1180 1253 8.2E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SUPERFAMILY SSF49299 1074 1166 1.11E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Pfam PF07691 PA14 domain 634 760 1.8E-19 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 PANTHER PTHR10083 779 1164 8.5E-75 T 23-04-2016 NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Gene3D G3DSA:3.90.182.10 633 796 2.2E-39 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SUPERFAMILY SSF49299 878 970 1.43E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Gene3D G3DSA:2.60.40.670 797 878 3.6E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Gene3D G3DSA:2.60.40.670 977 1067 3.9E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Gene3D G3DSA:2.60.40.670 1075 1164 8.8E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 PANTHER PTHR10083:SF217 779 1164 8.5E-75 T 23-04-2016 NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SUPERFAMILY SSF49299 976 1069 4.71E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SUPERFAMILY SSF56988 634 811 4.32E-35 T 23-04-2016 NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SMART SM00089 980 1069 4.2E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SMART SM00089 1078 1167 1.4E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SMART SM00089 882 971 5.9E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SMART SM00089 788 877 2.5E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SUPERFAMILY SSF49299 784 875 7.06E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 Pfam PF10162 G8 domain 51 116 1.4E-4 T 23-04-2016 IPR019316 G8 domain NIAKO_RS26190 584e82ae59512c746e840d84817520d1 1253 SMART SM00758 631 768 1.6E-13 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 SMART SM00354 3 73 1.2E-16 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 SUPERFAMILY SSF47413 2 61 3.43E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 Gene3D G3DSA:3.40.50.2300 56 176 1.8E-38 T 23-04-2016 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 50 3.3E-9 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 Gene3D G3DSA:3.40.50.2300 177 312 1.5E-31 T 23-04-2016 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 SUPERFAMILY SSF53822 59 334 2.69E-53 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 Pfam PF13377 Periplasmic binding protein-like domain 174 334 1.1E-23 T 23-04-2016 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 PANTHER PTHR30146 3 335 6.0E-85 T 23-04-2016 NIAKO_RS35855 0cdae9556d2566e5f051abb05f4057bd 335 Gene3D G3DSA:1.10.260.40 4 55 2.5E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 Gene3D G3DSA:1.10.10.60 173 219 9.5E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 SUPERFAMILY SSF51215 29 90 4.05E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 Gene3D G3DSA:2.60.120.280 28 127 3.4E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 PANTHER PTHR11019 27 264 2.2E-14 T 23-04-2016 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 Gene3D G3DSA:1.10.10.60 220 264 2.9E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 SUPERFAMILY SSF46689 220 265 1.03E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 SMART SM00342 183 266 8.2E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20930 a3c34d8cb1ae84d4fd21adc6c31b6d01 267 Pfam PF12833 Helix-turn-helix domain 194 265 8.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 PANTHER PTHR32125 1 154 5.2E-47 T 23-04-2016 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 34.644 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 Gene3D G3DSA:3.30.1330.50 1 156 6.5E-67 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 SUPERFAMILY SSF69765 1 156 8.9E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 3.6E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34440 e8a1cbcc0ba38060041b54b5dc535fdb 158 Pfam PF02542 YgbB family 1 155 6.5E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 PIRSF PIRSF005624 1 207 1.6E-52 T 23-04-2016 NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 Gene3D G3DSA:3.40.50.300 6 198 3.4E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 SUPERFAMILY SSF52540 3 200 5.66E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 5 202 1.4E-113 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 PANTHER PTHR31715 1 209 2.7E-123 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 46.286 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 NIAKO_RS02185 42d8fb485c2fdd95721a91ac7d51504c 209 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 6.3E-39 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 SUPERFAMILY SSF82861 88 177 6.8E-11 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 SUPERFAMILY SSF82689 245 347 1.44E-17 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 Pfam PF00924 Mechanosensitive ion channel 137 336 3.9E-45 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 Gene3D G3DSA:2.30.30.60 194 243 1.0E-12 T 23-04-2016 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 Gene3D G3DSA:3.30.70.100 247 334 2.9E-9 T 23-04-2016 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 PANTHER PTHR30566 11 343 1.9E-53 T 23-04-2016 NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 SUPERFAMILY SSF50182 179 243 1.14E-12 T 23-04-2016 IPR010920 LSM domain NIAKO_RS35215 0362864f7e2b11d09453a4c3fe578236 362 PANTHER PTHR30566:SF5 11 343 1.9E-53 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.420.10 332 429 5.3E-46 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.420.10 274 296 5.3E-46 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 24 757 0.0 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 502 528 2.7E-54 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 29 51 2.7E-54 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 289 312 2.7E-54 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 70 95 2.7E-54 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 55 68 2.7E-54 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PANTHER PTHR30555:SF0 1 207 0.0 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PANTHER PTHR30555:SF0 231 757 0.0 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.520.10 261 273 1.9E-73 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.520.10 736 757 3.0E-65 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.520.10 454 610 3.0E-65 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.520.10 50 204 1.9E-73 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PANTHER PTHR30555 1 207 0.0 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PANTHER PTHR30555 231 757 0.0 T 23-04-2016 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 SUPERFAMILY SSF48113 452 757 1.22E-114 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 ProSitePatterns PS00436 Peroxidases active site signature. 93 104 - T 23-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 SUPERFAMILY SSF48113 26 451 1.4E-149 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Hamap MF_01961 Catalase-peroxidase [katG]. 6 757 42.444 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 281 291 - T 23-04-2016 IPR019793 Peroxidases heam-ligand binding site NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00458 Haem peroxidase superfamily signature 171 183 1.6E-13 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00458 Haem peroxidase superfamily signature 340 355 1.6E-13 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00458 Haem peroxidase superfamily signature 153 170 1.6E-13 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 PRINTS PR00458 Haem peroxidase superfamily signature 93 107 1.6E-13 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Pfam PF00141 Peroxidase 72 417 5.1E-47 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Pfam PF00141 Peroxidase 424 730 2.3E-37 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NIAKO_RS06960 7f3234b5fea28ce738ea3c2d571654ed 757 Gene3D G3DSA:1.10.420.10 611 731 1.7E-45 T 23-04-2016 NIAKO_RS19485 3b77c3d8056f288f4578d517aa722096 332 Pfam PF16344 Domain of unknown function (DUF4974) 229 326 1.1E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS19485 3b77c3d8056f288f4578d517aa722096 332 PANTHER PTHR30273:SF2 1 332 1.1E-56 T 23-04-2016 NIAKO_RS19485 3b77c3d8056f288f4578d517aa722096 332 PANTHER PTHR30273 1 332 1.1E-56 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19485 3b77c3d8056f288f4578d517aa722096 332 PIRSF PIRSF018266 1 332 3.0E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19485 3b77c3d8056f288f4578d517aa722096 332 Pfam PF04773 FecR protein 125 214 1.5E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF81665 206 299 5.75E-87 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF81665 13 105 5.75E-87 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF81665 619 827 5.75E-87 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Gene3D G3DSA:3.40.1110.10 296 475 7.8E-23 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Gene3D G3DSA:2.70.150.10 12 47 1.4E-38 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Gene3D G3DSA:2.70.150.10 100 205 1.4E-38 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Pfam PF00122 E1-E2 ATPase 73 296 7.6E-59 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PANTHER PTHR24093 12 356 1.2E-186 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PANTHER PTHR24093 727 825 1.2E-186 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PANTHER PTHR24093 399 707 1.2E-186 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Gene3D G3DSA:1.20.1110.10 538 827 1.7E-83 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Gene3D G3DSA:1.20.1110.10 48 99 1.7E-83 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 569 588 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 593 605 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 490 500 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 468 479 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 1.5E-35 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Pfam PF00689 Cation transporting ATPase, C-terminus 655 825 3.3E-30 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF56784 303 323 1.75E-48 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF56784 425 651 1.75E-48 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF81660 313 463 3.92E-14 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 541 557 1.2E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 428 446 1.2E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 569 585 1.2E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 601 626 1.2E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 582 3.8E-20 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 509 652 4.2E-32 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 74 328 2.4E-43 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 SUPERFAMILY SSF81653 105 204 3.53E-28 T 23-04-2016 NIAKO_RS09285 d8e22ba6a2cb8a1f3175d283f1725713 840 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 61 1.2E-5 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 Gene3D G3DSA:3.30.1330.60 268 376 6.0E-26 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 PANTHER PTHR30128 247 379 9.5E-23 T 23-04-2016 NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 Gene3D G3DSA:2.60.120.260 23 180 3.4E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 SUPERFAMILY SSF103088 251 375 8.63E-26 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 PRINTS PR01021 OMPA domain signature 275 297 3.98E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 PRINTS PR01021 OMPA domain signature 319 335 3.98E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 PRINTS PR01021 OMPA domain signature 304 319 3.98E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37055 c91186aa688980d047e7c2faafa93b13 379 Pfam PF00691 OmpA family 274 369 3.2E-15 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Pfam PF00072 Response regulator receiver domain 9 110 3.3E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 SUPERFAMILY SSF46689 363 446 1.28E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 SMART SM00448 7 119 8.5E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Pfam PF00158 Sigma-54 interaction domain 149 315 8.0E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Gene3D G3DSA:3.40.50.300 148 321 5.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 SUPERFAMILY SSF52172 5 194 5.12E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 SUPERFAMILY SSF52540 149 390 1.36E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Gene3D G3DSA:1.10.10.60 405 446 4.2E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 SMART SM00382 169 312 1.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Gene3D G3DSA:3.40.50.2300 7 136 1.3E-22 T 23-04-2016 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 Gene3D G3DSA:1.10.8.60 322 395 4.4E-23 T 23-04-2016 NIAKO_RS29615 cb1b9ccb872ee4a7d0a4cc768cb4c630 453 PANTHER PTHR32071 7 452 4.1E-167 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Pfam PF00342 Phosphoglucose isomerase 52 542 4.8E-244 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Gene3D G3DSA:3.40.50.10490 99 292 4.8E-87 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 1.3E-57 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PANTHER PTHR11469 1 546 0.0 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 PANTHER PTHR11469:SF11 1 546 0.0 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 SUPERFAMILY SSF53697 7 547 1.84E-223 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Gene3D G3DSA:3.40.50.10490 10 98 4.1E-148 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Gene3D G3DSA:3.40.50.10490 294 507 4.1E-148 T 23-04-2016 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Gene3D G3DSA:1.10.1390.10 508 548 1.5E-22 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS05670 c0738589e281cc44c8cbaa145a143fa3 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 525 41.497 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 378 518 1.92E-57 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 620 913 1.92E-57 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 445 507 5.1E-67 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 50 364 5.1E-67 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 864 1094 1.57E-15 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 256 318 2.2E-12 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 665 731 1.3E-8 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 66 129 5.8E-14 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 746 790 5.2E-7 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 843 904 1.8E-11 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 400 495 6.3E-11 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Gene3D G3DSA:2.130.10.130 655 912 4.2E-21 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Gene3D G3DSA:2.130.10.130 46 145 5.8E-10 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Gene3D G3DSA:2.130.10.130 146 508 1.9E-32 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 PANTHER PTHR16026 370 603 1.3E-24 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 PANTHER PTHR16026 58 332 1.3E-24 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 SUPERFAMILY SSF69318 392 417 5.1E-67 T 23-04-2016 NIAKO_RS27055 1148ed1f1f3e9c666eb35edd927c8971 1193 Pfam PF07593 ASPIC and UnbV 533 600 8.5E-20 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 299 9.7E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 Gene3D G3DSA:1.10.287.130 238 298 4.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PANTHER PTHR24423:SF518 214 471 2.4E-46 T 23-04-2016 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 SMART SM00387 344 470 1.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PANTHER PTHR24423 214 471 2.4E-46 T 23-04-2016 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PANTHER PTHR24423:SF518 2 18 2.4E-46 T 23-04-2016 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 Gene3D G3DSA:3.30.565.10 308 470 1.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 SUPERFAMILY SSF55874 306 468 2.1E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 Pfam PF05227 CHASE3 domain 53 176 2.9E-22 T 23-04-2016 IPR007891 CHASE3 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 469 7.2E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 PANTHER PTHR24423 2 18 2.4E-46 T 23-04-2016 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 SMART SM00388 235 303 5.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37285 9e3a64537338e8551c9ac4be4e75b03c 471 SUPERFAMILY SSF47384 222 300 5.69E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 PANTHER PTHR24421:SF1 18 212 2.1E-35 T 23-04-2016 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 154 168 7.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 170 188 7.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 194 207 7.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 120 208 4.7E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 Gene3D G3DSA:3.30.565.10 116 211 7.3E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 SMART SM00387 118 210 1.5E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 Pfam PF07730 Histidine kinase 19 76 1.3E-7 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 SUPERFAMILY SSF55874 90 208 9.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21065 8d2856e8b9ec1aef935a522c3220560c 212 PANTHER PTHR24421 18 212 2.1E-35 T 23-04-2016 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 Gene3D G3DSA:3.40.1010.10 1 109 5.3E-18 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 200 1.7E-28 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 PIRSF PIRSF005917 1 221 5.6E-92 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 SUPERFAMILY SSF53790 1 217 1.57E-79 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 219 36.113 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 PANTHER PTHR21091:SF18 1 219 8.2E-88 T 23-04-2016 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 PANTHER PTHR21091 1 219 8.2E-88 T 23-04-2016 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 220 5.2E-77 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS26880 b97cb625f05c2675b031cc5572aa4523 221 Gene3D G3DSA:3.30.950.10 110 220 4.0E-41 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NIAKO_RS12205 3cba7501026213325611c0657f3d6e80 301 PANTHER PTHR16222:SF12 2 301 4.0E-37 T 23-04-2016 NIAKO_RS12205 3cba7501026213325611c0657f3d6e80 301 Pfam PF03747 ADP-ribosylglycohydrolase 15 271 3.0E-47 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS12205 3cba7501026213325611c0657f3d6e80 301 PANTHER PTHR16222 2 301 4.0E-37 T 23-04-2016 NIAKO_RS12205 3cba7501026213325611c0657f3d6e80 301 SUPERFAMILY SSF101478 8 298 4.32E-52 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 374 33.248 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 Pfam PF12327 FtsZ family, C-terminal domain 222 320 1.2E-17 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 SUPERFAMILY SSF55307 207 325 5.49E-33 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 SMART SM00865 207 328 6.4E-30 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PANTHER PTHR30314 1 323 2.7E-148 T 23-04-2016 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PANTHER PTHR30314:SF3 1 323 2.7E-148 T 23-04-2016 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 333 3.9E-110 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 Gene3D G3DSA:3.30.1330.20 215 323 2.2E-35 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 171 8.9E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PRINTS PR00423 Cell division protein FtsZ signature 127 148 7.0E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PRINTS PR00423 Cell division protein FtsZ signature 212 233 7.0E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PRINTS PR00423 Cell division protein FtsZ signature 99 119 7.0E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 PRINTS PR00423 Cell division protein FtsZ signature 189 211 7.0E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 SMART SM00864 13 205 4.8E-96 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 Gene3D G3DSA:3.40.50.1440 14 214 3.9E-86 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS36045 eb92c591fda1a54e2bba31500d27dc6a 610 SUPERFAMILY SSF52490 15 208 2.09E-61 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 Gene3D G3DSA:3.20.20.120 181 447 2.5E-76 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 93 176 1.8E-10 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 PANTHER PTHR13794 261 484 2.7E-77 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 PANTHER PTHR13794 52 216 2.7E-77 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 Gene3D G3DSA:3.30.390.10 72 180 1.7E-29 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 Pfam PF13378 Enolase C-terminal domain-like 257 460 2.0E-43 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 SUPERFAMILY SSF51604 164 467 3.01E-63 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 PANTHER PTHR13794:SF4 261 484 2.7E-77 T 23-04-2016 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 PANTHER PTHR13794:SF4 52 216 2.7E-77 T 23-04-2016 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 SMART SM00922 195 337 1.5E-6 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 SUPERFAMILY SSF54826 75 176 7.53E-20 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS13930 6b9642ab5a7ebdd1b2f063003783a639 491 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 31 54 1.9E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SUPERFAMILY SSF49299 806 877 3.27E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SUPERFAMILY SSF49299 1050 1133 3.01E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 PANTHER PTHR35580:SF1 442 673 3.8E-14 T 23-04-2016 NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SUPERFAMILY SSF49299 886 958 3.27E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Pfam PF13585 C-terminal domain of CHU protein family 1142 1226 7.7E-15 T 23-04-2016 NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Pfam PF00801 PKD domain 1064 1124 4.6E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Pfam PF00801 PKD domain 811 858 6.5E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 PANTHER PTHR35580 442 673 3.8E-14 T 23-04-2016 NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 PANTHER PTHR35580 79 422 3.8E-14 T 23-04-2016 NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 PANTHER PTHR35580:SF1 79 422 3.8E-14 T 23-04-2016 NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Gene3D G3DSA:2.60.40.670 980 1046 1.4E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Gene3D G3DSA:2.60.40.670 806 879 3.3E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Gene3D G3DSA:2.60.40.670 1055 1133 1.2E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1142 1228 1.3E-11 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SMART SM00089 1057 1138 4.8E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SMART SM00089 801 879 8.1E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SMART SM00089 975 1053 0.093 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SMART SM00089 882 973 0.6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 SUPERFAMILY SSF49299 968 1040 4.71E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35940 3d0bdd38728f2e6cc8c248a5a53e5934 1228 Gene3D G3DSA:2.60.40.670 887 959 9.9E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 Pfam PF02927 Cellulase N-terminal ig-like domain 274 357 1.4E-6 T 23-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 Gene3D G3DSA:2.60.40.10 263 365 7.0E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 Pfam PF00759 Glycosyl hydrolase family 9 439 827 6.7E-21 T 23-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 Gene3D G3DSA:1.50.10.10 368 832 1.1E-55 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 SUPERFAMILY SSF48208 368 833 4.03E-43 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS12030 0230776d2094de2a91c56928b5742666 836 SUPERFAMILY SSF81296 272 366 4.55E-12 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 Gene3D G3DSA:3.30.70.60 1 97 1.2E-28 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 16.222 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 Pfam PF01250 Ribosomal protein S6 3 91 1.1E-26 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 91 1.1E-18 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 SUPERFAMILY SSF54995 1 99 6.67E-29 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS25175 dd1a86f0b925bb3065b79bb75d43c65b 117 PANTHER PTHR21011 1 89 1.1E-22 T 23-04-2016 NIAKO_RS06810 697749fe84845019cca42fbb3378a033 421 Gene3D G3DSA:3.40.30.10 267 419 3.0E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06810 697749fe84845019cca42fbb3378a033 421 PANTHER PTHR10681:SF110 283 403 1.1E-17 T 23-04-2016 NIAKO_RS06810 697749fe84845019cca42fbb3378a033 421 PANTHER PTHR10681 283 403 1.1E-17 T 23-04-2016 NIAKO_RS06810 697749fe84845019cca42fbb3378a033 421 SUPERFAMILY SSF52833 278 419 8.96E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06810 697749fe84845019cca42fbb3378a033 421 Pfam PF13905 Thioredoxin-like 297 396 1.9E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 Pfam PF17148 Domain of unknown function (DUF5117) 107 294 2.7E-66 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 SUPERFAMILY SSF55486 301 522 5.57E-21 T 23-04-2016 NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 Pfam PF17162 Domain of unknown function (DUF5118) 43 90 1.1E-21 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 Pfam PF16313 Met-zincin 426 734 8.9E-115 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 Gene3D G3DSA:3.40.390.10 283 520 1.5E-14 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS25390 6f42d5cf10f1527da0ed510dd05ce34c 819 PANTHER PTHR38478 1 762 3.9E-135 T 23-04-2016 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 PANTHER PTHR30572:SF4 400 792 6.3E-106 T 23-04-2016 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 PANTHER PTHR30572:SF4 9 354 6.3E-106 T 23-04-2016 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 PANTHER PTHR30572 400 792 6.3E-106 T 23-04-2016 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 PANTHER PTHR30572 9 354 6.3E-106 T 23-04-2016 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 Pfam PF12704 MacB-like periplasmic core domain 432 636 2.6E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 Pfam PF12704 MacB-like periplasmic core domain 20 237 8.2E-20 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 Pfam PF02687 FtsX-like permease family 673 781 1.5E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS05925 e00103c28541b285d3d039f69e153337 792 Pfam PF02687 FtsX-like permease family 288 403 2.7E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 SUPERFAMILY SSF56024 313 485 9.1E-44 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 6 677 1.1E-207 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Gene3D G3DSA:3.30.870.10 499 682 3.6E-60 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 SUPERFAMILY SSF143724 106 304 7.65E-52 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Pfam PF13089 Polyphosphate kinase N-terminal domain 6 109 1.0E-33 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 PIRSF PIRSF015589 1 695 6.4E-216 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 PANTHER PTHR30218 6 702 6.5E-246 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 PANTHER PTHR30218:SF0 6 702 6.5E-246 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 SUPERFAMILY SSF56024 501 682 5.89E-59 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Gene3D G3DSA:3.30.1840.10 105 299 1.6E-51 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Pfam PF02503 Polyphosphate kinase middle domain 117 315 1.4E-46 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Gene3D G3DSA:3.30.870.10 313 490 7.4E-56 T 23-04-2016 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 SUPERFAMILY SSF140356 5 105 4.45E-31 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS12725 b1830b3e13a14522e44dcdf108c9a699 706 Pfam PF13090 Polyphosphate kinase C-terminal domain 329 676 9.0E-127 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 PANTHER PTHR30126:SF11 1 300 6.8E-69 T 23-04-2016 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 SUPERFAMILY SSF53850 92 299 3.72E-37 T 23-04-2016 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 Pfam PF03466 LysR substrate binding domain 91 296 4.6E-36 T 23-04-2016 IPR005119 LysR, substrate-binding NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 Gene3D G3DSA:1.10.10.10 7 73 1.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 SUPERFAMILY SSF46785 7 83 7.07E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 PANTHER PTHR30126 1 300 6.8E-69 T 23-04-2016 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 Gene3D G3DSA:3.40.190.10 90 175 1.5E-18 T 23-04-2016 NIAKO_RS21445 a500bb3ce31ca04e00bae82e4532b238 302 Gene3D G3DSA:3.40.190.10 176 265 8.0E-8 T 23-04-2016 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 PANTHER PTHR23310 1 84 1.3E-35 T 23-04-2016 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 PRINTS PR00689 Acyl-coA-binding protein signature 21 39 6.4E-18 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 PRINTS PR00689 Acyl-coA-binding protein signature 4 19 6.4E-18 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 6.4E-18 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 6.4E-18 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 ProSitePatterns PS00880 Acyl-CoA-binding (ACB) domain signature. 21 39 - T 23-04-2016 IPR022408 Acyl-CoA-binding protein, ACBP, conserved site NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 SUPERFAMILY SSF47027 3 83 3.4E-28 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 Gene3D G3DSA:1.20.80.10 2 83 4.4E-28 T 23-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle NIAKO_RS10645 6484edfd519cbcf4e516305f22ea5f29 84 Pfam PF00887 Acyl CoA binding protein 4 83 5.0E-28 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 4 885 8.3E-235 T 23-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Pfam PF00128 Alpha amylase, catalytic domain 21 120 3.1E-17 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 SMART SM00642 4 477 1.7E-5 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357:SF166 249 399 1.6E-98 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357:SF166 693 875 1.6E-98 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357:SF166 1 124 1.6E-98 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 SUPERFAMILY SSF51445 239 469 5.16E-102 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 SUPERFAMILY SSF51445 501 800 5.16E-102 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 SUPERFAMILY SSF51445 3 158 5.16E-102 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:1.10.10.470 593 694 2.7E-24 T 23-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:1.10.150.200 394 453 3.9E-5 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:1.10.150.200 490 517 3.9E-5 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.20.20.80 701 798 8.1E-62 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.20.20.80 16 91 8.1E-62 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.20.20.80 546 582 8.1E-62 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.20.20.80 283 373 8.1E-62 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.30.1590.10 92 177 3.8E-34 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:3.30.1590.10 243 280 3.8E-34 T 23-04-2016 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 Gene3D G3DSA:2.60.40.1180 803 869 9.0E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357 249 399 1.6E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357 693 875 1.6E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15345 b3206069f6df097a3db4ba6c61d43203 889 PANTHER PTHR10357 1 124 1.6E-98 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18145 20b27161391f32d993a9e34139547200 178 Gene3D G3DSA:2.30.110.10 19 177 3.7E-46 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS18145 20b27161391f32d993a9e34139547200 178 PANTHER PTHR34818 14 171 6.8E-32 T 23-04-2016 NIAKO_RS18145 20b27161391f32d993a9e34139547200 178 SUPERFAMILY SSF50475 22 150 1.52E-28 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS18145 20b27161391f32d993a9e34139547200 178 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 21 169 1.0E-48 T 23-04-2016 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 Gene3D G3DSA:1.10.10.10 132 229 9.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.2E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 SUPERFAMILY SSF46894 131 229 5.39E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 SMART SM00448 4 115 1.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 PANTHER PTHR26402:SF292 4 230 3.8E-62 T 23-04-2016 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 Gene3D G3DSA:3.40.50.2300 2 122 2.8E-32 T 23-04-2016 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 SUPERFAMILY SSF52172 1 127 1.31E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 SMART SM00862 153 227 9.8E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS31705 68d3b0afafd3c3f5d2d57a86d78591a1 230 PANTHER PTHR26402 4 230 3.8E-62 T 23-04-2016 NIAKO_RS24000 02dbc3580629383bb5b71d607db2bf3c 159 Pfam PF13673 Acetyltransferase (GNAT) domain 31 135 5.9E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS24000 02dbc3580629383bb5b71d607db2bf3c 159 Gene3D G3DSA:3.40.630.30 2 136 4.1E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24000 02dbc3580629383bb5b71d607db2bf3c 159 SUPERFAMILY SSF55729 1 134 9.57E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PANTHER PTHR19139:SF147 1 241 9.4E-93 T 23-04-2016 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PANTHER PTHR19139 1 241 9.4E-93 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 44 68 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 174 196 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 136 154 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 221 241 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 81 100 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 PRINTS PR00783 Major intrinsic protein family signature 2 21 7.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 Pfam PF00230 Major intrinsic protein 3 238 1.7E-48 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 ProSitePatterns PS00221 MIP family signature. 62 70 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 238 1.5E-55 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 SUPERFAMILY SSF81338 2 241 3.79E-72 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS03515 b07bc47eea67dedc2317a175a0f3e5e5 242 Gene3D G3DSA:1.20.1080.10 2 240 2.4E-88 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS09610 fc09a4d99fd46b6615a73487c96c07bd 346 PANTHER PTHR11584:SF382 23 279 1.4E-34 T 23-04-2016 NIAKO_RS09610 fc09a4d99fd46b6615a73487c96c07bd 346 SUPERFAMILY SSF52151 24 237 2.88E-38 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS09610 fc09a4d99fd46b6615a73487c96c07bd 346 PANTHER PTHR11584 23 279 1.4E-34 T 23-04-2016 NIAKO_RS09610 fc09a4d99fd46b6615a73487c96c07bd 346 Gene3D G3DSA:3.40.1090.10 20 228 1.9E-14 T 23-04-2016 NIAKO_RS09610 fc09a4d99fd46b6615a73487c96c07bd 346 Pfam PF01734 Patatin-like phospholipase 27 229 8.0E-28 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS30245 d3187bce6d547484fe59cff83e5dbc8b 101 SMART SM00530 22 77 2.5E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS30245 d3187bce6d547484fe59cff83e5dbc8b 101 SUPERFAMILY SSF47413 11 83 3.49E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30245 d3187bce6d547484fe59cff83e5dbc8b 101 Gene3D G3DSA:1.10.260.40 13 78 1.6E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30245 d3187bce6d547484fe59cff83e5dbc8b 101 Pfam PF13560 Helix-turn-helix domain 18 77 3.0E-8 T 23-04-2016 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 TIGRFAM TIGR03520 GldE: gliding motility-associated protein GldE 34 442 4.0E-128 T 23-04-2016 IPR019862 Gliding motility-associated protein GldE NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 Pfam PF01595 Domain of unknown function DUF21 33 208 7.5E-26 T 23-04-2016 IPR002550 Domain of unknown function DUF21 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 SMART SM01091 360 443 2.9E-20 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 Pfam PF03471 Transporter associated domain 361 441 1.6E-14 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 Gene3D G3DSA:3.30.465.10 354 441 8.3E-22 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 SUPERFAMILY SSF54631 221 363 2.2E-31 T 23-04-2016 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 PANTHER PTHR22777 10 441 1.0E-93 T 23-04-2016 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 Pfam PF00571 CBS domain 295 344 2.6E-7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 SUPERFAMILY SSF56176 359 441 1.17E-17 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS28505 ec5e9ddede49a9bfc36f9b104f1b040c 450 Gene3D G3DSA:3.10.580.10 213 353 8.1E-20 T 23-04-2016 NIAKO_RS30500 d0a143520dc69398ce8a4b5e6dc0d7d3 757 Pfam PF01734 Patatin-like phospholipase 374 612 1.2E-8 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS30500 d0a143520dc69398ce8a4b5e6dc0d7d3 757 SUPERFAMILY SSF52151 374 483 7.06E-9 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS30500 d0a143520dc69398ce8a4b5e6dc0d7d3 757 SUPERFAMILY SSF52151 519 622 7.06E-9 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 348 378 2.4E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532 701 731 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532 339 580 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532 771 1219 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532 139 311 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532:SF57 701 731 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532:SF57 339 580 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532:SF57 771 1219 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 PANTHER PTHR11532:SF57 139 311 1.4E-125 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.170.130.10 242 375 8.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Pfam PF07715 TonB-dependent Receptor Plug Domain 241 372 1.9E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.40.170.20 485 988 1.1E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.40.170.20 1051 1105 1.1E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.40.170.20 1143 1221 1.1E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.40.170.20 376 400 1.1E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 SUPERFAMILY SSF49464 140 231 6.47E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Pfam PF13620 Carboxypeptidase regulatory-like domain 140 210 3.1E-13 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 139 1221 1.4E-155 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 SUPERFAMILY SSF56935 610 983 2.71E-62 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 SUPERFAMILY SSF56935 1043 1103 2.71E-62 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 SUPERFAMILY SSF56935 476 565 2.71E-62 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 SUPERFAMILY SSF56935 228 396 2.71E-62 T 23-04-2016 NIAKO_RS19720 90f0012c60102efd3eaca9f23d427c7a 1221 Gene3D G3DSA:2.60.40.1120 140 235 1.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 Gene3D G3DSA:3.40.50.300 1088 1232 9.0E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 SMART SM00487 792 978 1.7E-33 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 Gene3D G3DSA:3.40.50.300 788 964 9.5E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 Pfam PF00176 SNF2 family N-terminal domain 815 1078 1.7E-64 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 SUPERFAMILY SSF52540 1007 1256 1.41E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 SUPERFAMILY SSF52540 769 1006 2.72E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 Pfam PF00271 Helicase conserved C-terminal domain 1091 1202 1.3E-16 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 Pfam PF08455 Bacterial SNF2 helicase associated 444 777 2.0E-20 T 23-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 PANTHER PTHR10799 783 1242 9.4E-179 T 23-04-2016 NIAKO_RS31665 3702f3075d444e279b43a2856e0fc323 1257 SMART SM00490 1119 1202 2.0E-24 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Hamap MF_01588 DNA ligase [ligA]. 23 617 35.917 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Gene3D G3DSA:1.10.287.610 21 87 1.4E-20 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 434 460 4.9E-8 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Pfam PF14520 Helix-hairpin-helix domain 475 525 9.8E-5 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Gene3D G3DSA:1.10.150.20 530 610 6.2E-21 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 33 612 5.3E-203 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SUPERFAMILY SSF50249 345 426 6.17E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SMART SM00532 24 474 8.4E-199 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 348 424 5.7E-31 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Pfam PF12826 Helix-hairpin-helix motif 536 599 2.3E-14 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Gene3D G3DSA:1.10.150.20 461 529 1.0E-22 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 358 373 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 PANTHER PTHR23389 1 551 3.7E-156 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 PIRSF PIRSF001604 17 616 2.3E-195 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Gene3D G3DSA:2.40.50.140 346 417 2.2E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SMART SM00278 506 525 12.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SMART SM00278 570 589 0.21 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SMART SM00278 472 491 1300.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 26 345 6.8E-106 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SUPERFAMILY SSF47781 431 609 5.93E-48 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 Gene3D G3DSA:3.30.470.30 141 279 5.7E-37 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 SUPERFAMILY SSF56091 25 342 4.32E-92 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 PANTHER PTHR23389:SF9 1 551 3.7E-156 T 23-04-2016 NIAKO_RS11325 99b5ee1fc2501dc50cdddd4b117613fd 617 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 135 164 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site NIAKO_RS10900 39b8e20aae84651a183650683c517d0a 243 Pfam PF05742 Transport and Golgi organisation 2 1 93 2.2E-6 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 NIAKO_RS03865 dc264405dd440027d1584efa977ef34f 188 SUPERFAMILY SSF53597 1 186 3.53E-32 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS03865 dc264405dd440027d1584efa977ef34f 188 Pfam PF01872 RibD C-terminal domain 4 181 1.4E-23 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS03865 dc264405dd440027d1584efa977ef34f 188 PANTHER PTHR38011:SF2 2 188 6.1E-31 T 23-04-2016 NIAKO_RS03865 dc264405dd440027d1584efa977ef34f 188 Gene3D G3DSA:3.40.430.10 3 186 1.0E-27 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS03865 dc264405dd440027d1584efa977ef34f 188 PANTHER PTHR38011 2 188 6.1E-31 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF04563 RNA polymerase beta subunit 24 459 3.7E-22 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1044 1056 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 SUPERFAMILY SSF64484 9 222 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 SUPERFAMILY SSF64484 303 903 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 SUPERFAMILY SSF64484 1020 1266 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF04561 RNA polymerase Rpb2, domain 2 309 414 1.2E-20 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF04561 RNA polymerase Rpb2, domain 2 149 219 1.4E-5 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.30.150.10 552 617 2.6E-19 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.40.270.10 757 784 2.8E-74 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.40.270.10 1041 1169 2.8E-74 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF00562 RNA polymerase Rpb2, domain 6 680 1191 8.8E-153 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.40.50.100 677 756 8.2E-23 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 10 1267 11.837 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:3.90.1110.10 151 226 3.5E-58 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:3.90.1110.10 306 404 3.5E-58 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.40.50.150 791 901 2.2E-53 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:2.40.50.150 1026 1040 2.2E-53 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 541 6.2E-29 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 617 6.0E-20 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 7 1265 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856:SF20 1 227 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856:SF20 300 894 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856:SF20 1015 1267 0.0 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856 1 227 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856 300 894 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 PANTHER PTHR20856 1015 1267 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:3.90.1100.10 405 551 1.7E-135 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:3.90.1100.10 620 673 1.7E-135 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Gene3D G3DSA:3.90.1100.10 17 149 1.7E-135 T 23-04-2016 NIAKO_RS24165 c1402797d9ca57f75672cdcc4443fef1 1267 Pfam PF04560 RNA polymerase Rpb2, domain 7 1193 1266 2.6E-24 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS00285 59e9b310f23e7c4067c703970410171c 197 Gene3D G3DSA:3.40.430.10 3 186 1.1E-21 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS00285 59e9b310f23e7c4067c703970410171c 197 SUPERFAMILY SSF53597 2 187 8.25E-24 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS00285 59e9b310f23e7c4067c703970410171c 197 Pfam PF01872 RibD C-terminal domain 2 181 9.6E-19 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS00285 59e9b310f23e7c4067c703970410171c 197 PANTHER PTHR38011 2 189 5.7E-73 T 23-04-2016 NIAKO_RS00285 59e9b310f23e7c4067c703970410171c 197 PANTHER PTHR38011:SF2 2 189 5.7E-73 T 23-04-2016 NIAKO_RS20675 90b6af2cc9400c5ae6c4f4e5a2867b17 283 SMART SM00702 31 220 0.0048 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NIAKO_RS20675 90b6af2cc9400c5ae6c4f4e5a2867b17 283 SUPERFAMILY SSF51197 33 169 2.61E-6 T 23-04-2016 NIAKO_RS20675 90b6af2cc9400c5ae6c4f4e5a2867b17 283 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 121 219 1.1E-13 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NIAKO_RS20675 90b6af2cc9400c5ae6c4f4e5a2867b17 283 Gene3D G3DSA:2.60.120.620 19 155 2.9E-4 T 23-04-2016 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 Gene3D G3DSA:3.10.20.30 2 73 5.6E-30 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 PANTHER PTHR11908:SF66 1 133 1.3E-33 T 23-04-2016 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 PANTHER PTHR11908 1 133 1.3E-33 T 23-04-2016 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 Pfam PF01799 [2Fe-2S] binding domain 72 143 3.9E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 SUPERFAMILY SSF54292 2 77 3.41E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 SUPERFAMILY SSF47741 72 150 1.31E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 Gene3D G3DSA:1.10.150.120 74 152 8.6E-33 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS15085 d7e35a8fbb4b3f8b89f2949833ee84a5 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 3.8E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 241 3.8E-64 T 23-04-2016 NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 Gene3D G3DSA:3.40.50.720 2 243 8.6E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PANTHER PTHR24322 149 181 1.6E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PANTHER PTHR24322 8 133 1.6E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 SUPERFAMILY SSF51735 5 244 3.85E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03660 f74f04c56157de45a5eece27ca107b86 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS27095 d08dd3a466e3157d015b6c048d9fec4f 212 Gene3D G3DSA:3.40.50.150 9 212 4.6E-64 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27095 d08dd3a466e3157d015b6c048d9fec4f 212 PANTHER PTHR10509:SF14 11 212 1.1E-58 T 23-04-2016 NIAKO_RS27095 d08dd3a466e3157d015b6c048d9fec4f 212 PANTHER PTHR10509 11 212 1.1E-58 T 23-04-2016 NIAKO_RS27095 d08dd3a466e3157d015b6c048d9fec4f 212 SUPERFAMILY SSF53335 5 209 3.98E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27095 d08dd3a466e3157d015b6c048d9fec4f 212 Pfam PF01596 O-methyltransferase 19 211 5.9E-45 T 23-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 PANTHER PTHR11751 10 94 1.4E-15 T 23-04-2016 NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 SUPERFAMILY SSF48008 74 209 1.36E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 Gene3D G3DSA:1.20.120.530 72 209 1.5E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 SMART SM00895 78 202 1.5E-14 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 PANTHER PTHR11751:SF436 10 94 1.4E-15 T 23-04-2016 NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 Pfam PF07729 FCD domain 78 201 2.4E-20 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 Gene3D G3DSA:1.10.10.10 3 69 2.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 SMART SM00345 10 68 6.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 SUPERFAMILY SSF46785 4 72 5.03E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18635 4b78733ae36facb3656e629d1d533901 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 6.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 Gene3D G3DSA:3.40.50.300 2 222 6.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 PANTHER PTHR24220 4 298 2.7E-95 T 23-04-2016 NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 SMART SM00382 27 208 5.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 SUPERFAMILY SSF52540 3 222 3.15E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 TIGRFAM TIGR03522 GldA_ABC_ATP: gliding motility-associated ABC transporter ATP-binding subunit GldA 1 302 2.9E-133 T 23-04-2016 IPR019864 Gliding motility-associated ABC transporter ATP-binding subunit GldA NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 PANTHER PTHR24220:SF160 4 298 2.7E-95 T 23-04-2016 NIAKO_RS32745 c6fcab0f2e95a32875b24dc82a39d384 308 Pfam PF00005 ABC transporter 19 161 2.5E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 Pfam PF16916 Dimerisation domain of Zinc Transporter 209 288 7.5E-11 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 Gene3D G3DSA:3.30.70.1350 206 288 1.2E-16 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 3.6E-61 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 PANTHER PTHR11562:SF55 5 300 1.8E-59 T 23-04-2016 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 SUPERFAMILY SSF161111 7 206 4.97E-50 T 23-04-2016 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 Gene3D G3DSA:1.20.1510.10 12 202 5.8E-41 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 PANTHER PTHR11562 5 300 1.8E-59 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 Pfam PF01545 Cation efflux family 15 204 5.9E-40 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS34605 13323f44109a40806cff2e56fcadf911 327 SUPERFAMILY SSF160240 208 288 4.58E-16 T 23-04-2016 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 Pfam PF00069 Protein kinase domain 13 267 2.2E-47 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 Gene3D G3DSA:3.30.200.20 9 74 1.3E-16 T 23-04-2016 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 Gene3D G3DSA:1.10.510.10 75 282 7.2E-47 T 23-04-2016 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 PANTHER PTHR24362:SF160 12 284 4.7E-65 T 23-04-2016 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 PANTHER PTHR24362 12 284 4.7E-65 T 23-04-2016 NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 SUPERFAMILY SSF56112 9 279 1.46E-65 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS37115 e45c6c06df6dbf46ac4d60041fa6b28c 591 SMART SM00220 13 273 2.9E-54 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS15665 8004be8f7a4e0cfae7a477cfd0339175 240 Gene3D G3DSA:3.40.50.300 72 165 1.4E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15665 8004be8f7a4e0cfae7a477cfd0339175 240 SUPERFAMILY SSF52540 49 165 2.5E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15665 8004be8f7a4e0cfae7a477cfd0339175 240 PIRSF PIRSF034285 1 236 5.7E-51 T 23-04-2016 IPR017026 Inducible mutagenesis protein A NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 SUPERFAMILY SSF51905 709 893 2.59E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Pfam PF00384 Molybdopterin oxidoreductase 66 495 3.5E-80 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PANTHER PTHR11615:SF119 13 722 1.5E-226 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Pfam PF04324 BFD-like [2Fe-2S] binding domain 1113 1162 3.4E-11 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 851 869 7.5E-18 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 712 731 7.5E-18 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 961 983 7.5E-18 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 807 825 7.5E-18 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 936 952 7.5E-18 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 SMART SM00926 8 62 3.2E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 13 31 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Pfam PF01568 Molydopterin dinucleotide binding domain 587 699 1.9E-32 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 SUPERFAMILY SSF51905 849 1013 5.0E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.40.50.740 67 140 1.4E-77 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.40.50.740 324 346 1.4E-77 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.40.50.740 380 533 1.4E-77 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 976 983 1.5E-13 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 711 733 1.5E-13 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 937 951 1.5E-13 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 851 876 1.5E-13 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.40.228.10 142 323 3.0E-60 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 PANTHER PTHR11615 13 722 1.5E-226 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.50.50.60 709 865 1.7E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 61 2.7E-16 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:2.40.40.20 537 704 2.0E-50 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:2.20.25.90 11 66 1.3E-17 T 23-04-2016 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 711 988 1.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 Gene3D G3DSA:3.50.50.60 866 1010 2.0E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 SUPERFAMILY SSF50692 560 704 3.39E-44 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain NIAKO_RS26140 3f657cf70227d4f6d2bd4b50d14101fc 1174 SUPERFAMILY SSF53706 11 589 1.7E-191 T 23-04-2016 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 2.8E-14 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 Gene3D G3DSA:3.30.1020.10 158 210 1.0E-28 T 23-04-2016 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 PIRSF PIRSF000239 1 208 4.1E-78 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 SUPERFAMILY SSF52833 3 208 3.99E-67 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 Gene3D G3DSA:3.40.30.10 4 157 3.6E-56 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 PANTHER PTHR10681:SF99 3 206 1.2E-97 T 23-04-2016 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 Pfam PF00578 AhpC/TSA family 6 134 8.9E-28 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS34660 f50014f327a6ac3094e2c9784f35bd47 211 PANTHER PTHR10681 3 206 1.2E-97 T 23-04-2016 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 Pfam PF04542 Sigma-70 region 2 21 88 6.3E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 PANTHER PTHR30173 1 186 1.2E-51 T 23-04-2016 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 Pfam PF08281 Sigma-70, region 4 128 178 6.4E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 SUPERFAMILY SSF88946 2 93 7.22E-30 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 Gene3D G3DSA:1.10.10.10 119 186 5.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 182 3.0E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 Gene3D G3DSA:1.10.1740.10 2 93 5.3E-34 T 23-04-2016 NIAKO_RS24650 a0cc0e8418490e6a5a0f30452445d7ee 194 SUPERFAMILY SSF88659 122 185 2.43E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF47384 796 879 3.53E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF08447 PAS fold 383 466 2.1E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00448 1062 1181 3.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00448 1208 1322 1.8E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00086 432 473 3.6E-4 T 23-04-2016 IPR001610 PAC motif NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00388 813 878 1.4E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF00512 His Kinase A (phospho-acceptor) domain 813 878 4.2E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF55874 867 1047 1.57E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF55785 220 345 1.02E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF08448 PAS fold 499 615 5.2E-12 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF00072 Response regulator receiver domain 1064 1180 3.1E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF00072 Response regulator receiver domain 1210 1322 9.3E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00387 925 1046 8.2E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF55781 624 799 6.76E-12 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF00989 PAS fold 234 288 1.9E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF52172 1063 1192 1.11E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.40.50.2300 1207 1324 2.1E-41 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.30.450.20 490 622 4.5E-15 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF55785 344 471 9.42E-23 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00091 232 297 3.4E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00091 359 425 1.3E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SMART SM00091 492 557 0.0013 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 925 1045 1.2E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PANTHER PTHR24423 1207 1324 5.8E-191 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PANTHER PTHR24423 337 613 5.8E-191 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PANTHER PTHR24423 971 1060 5.8E-191 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PANTHER PTHR24423 792 955 5.8E-191 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1030 1043 8.9E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1006 1024 8.9E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 989 999 8.9E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 985 8.9E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.30.450.20 368 482 3.3E-26 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.30.450.40 623 804 2.2E-14 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:1.10.287.130 807 863 2.1E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF55785 479 613 6.28E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 478 8.0E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 230 294 1.1E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 622 2.0E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.30.565.10 864 1044 6.9E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.40.50.2300 1063 1190 2.4E-30 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 Gene3D G3DSA:3.30.450.20 233 367 5.3E-15 T 23-04-2016 NIAKO_RS37390 3608e144fc9db09dc1951c4a15dcad79 1329 SUPERFAMILY SSF52172 1208 1325 1.42E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS01090 0b8be29d29c2505b5d794f93bbf2dd94 148 PANTHER PTHR12735 6 141 2.1E-47 T 23-04-2016 NIAKO_RS01090 0b8be29d29c2505b5d794f93bbf2dd94 148 Pfam PF02657 Fe-S metabolism associated domain 15 134 3.6E-45 T 23-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 NIAKO_RS01090 0b8be29d29c2505b5d794f93bbf2dd94 148 PANTHER PTHR12735:SF11 6 141 2.1E-47 T 23-04-2016 NIAKO_RS01090 0b8be29d29c2505b5d794f93bbf2dd94 148 SUPERFAMILY SSF82649 12 141 4.92E-44 T 23-04-2016 NIAKO_RS01090 0b8be29d29c2505b5d794f93bbf2dd94 148 Gene3D G3DSA:3.90.1010.10 3 143 5.6E-52 T 23-04-2016 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 Pfam PF12437 Glutamine synthetase type III N terminal 28 189 9.2E-72 T 23-04-2016 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 334 349 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 PANTHER PTHR20852 120 418 5.5E-74 T 23-04-2016 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 PANTHER PTHR20852:SF14 120 418 5.5E-74 T 23-04-2016 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 SUPERFAMILY SSF55931 459 601 1.96E-73 T 23-04-2016 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 SUPERFAMILY SSF55931 180 413 1.96E-73 T 23-04-2016 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 Pfam PF00120 Glutamine synthetase, catalytic domain 212 380 3.5E-17 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 SMART SM01230 190 477 3.5E-39 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 Gene3D G3DSA:3.30.590.10 459 599 1.3E-87 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 NIAKO_RS23170 72403373405ccae06c072f4ad7b4eb8d 730 Gene3D G3DSA:3.30.590.10 199 413 1.3E-87 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 Pfam PF01966 HD domain 33 125 5.5E-10 T 23-04-2016 IPR006674 HD domain NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 PANTHER PTHR40202:SF1 1 187 2.8E-47 T 23-04-2016 NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 PANTHER PTHR40202 1 187 2.8E-47 T 23-04-2016 NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 TIGRFAM TIGR00277 HDIG: HDIG domain 41 108 6.2E-8 T 23-04-2016 IPR006675 HDIG domain NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 SUPERFAMILY SSF109604 8 122 2.55E-12 T 23-04-2016 NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 9 187 1.8E-65 T 23-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein NIAKO_RS13345 a8fa37d5163349b8f95119cf5ea8a66c 190 Gene3D G3DSA:1.10.3210.10 39 111 6.6E-7 T 23-04-2016 IPR006674 HD domain NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 323 353 5.3E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.170.130.10 238 348 1.3E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Pfam PF13715 CarboxypepD_reg-like domain 153 234 1.1E-14 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF49464 153 245 5.36E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF56935 230 371 7.33E-71 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF56935 1014 1058 7.33E-71 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF56935 556 906 7.33E-71 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF56935 441 529 7.33E-71 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SUPERFAMILY SSF56935 1102 1152 7.33E-71 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532 630 967 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532 153 547 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532 1013 1185 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Pfam PF07715 TonB-dependent Receptor Plug Domain 242 347 2.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532:SF57 630 967 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532:SF57 153 547 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 PANTHER PTHR11532:SF57 1013 1185 3.1E-214 T 23-04-2016 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Pfam PF07660 Secretin and TonB N terminus short domain 86 136 1.3E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.40.170.20 1112 1152 1.1E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.40.170.20 1023 1068 1.1E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.40.170.20 349 367 1.1E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.40.170.20 450 933 1.1E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 153 1187 5.4E-233 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 SMART SM00965 85 136 8.6E-4 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS20840 0ef4e221b84ca7137bf2488600520743 1187 Gene3D G3DSA:2.60.40.1120 153 237 2.7E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS29235 0215ba1d785f04db9a69a42c89a5fe73 360 Gene3D G3DSA:3.40.50.1110 163 351 3.6E-14 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS29235 0215ba1d785f04db9a69a42c89a5fe73 360 SUPERFAMILY SSF52266 154 356 3.16E-22 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS29235 0215ba1d785f04db9a69a42c89a5fe73 360 Pfam PF14607 N-terminus of Esterase_SGNH_hydro-type 23 165 3.8E-42 T 23-04-2016 IPR032740 SGNH hydrolase-type esterase, N-terminal NIAKO_RS29235 0215ba1d785f04db9a69a42c89a5fe73 360 Pfam PF14606 GDSL-like Lipase/Acylhydrolase family 177 352 2.6E-64 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF49464 24 119 8.76E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Gene3D G3DSA:2.60.40.1120 25 108 1.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 9.9E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Gene3D G3DSA:2.40.170.20 350 815 3.0E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Gene3D G3DSA:2.40.170.20 865 898 3.0E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF56935 866 910 1.58E-72 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF56935 352 439 1.58E-72 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF56935 103 264 1.58E-72 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF56935 477 813 1.58E-72 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 SUPERFAMILY SSF56935 981 1031 1.58E-72 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532 25 188 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532 205 547 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532 606 1075 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Gene3D G3DSA:2.170.130.10 109 241 2.0E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 238 3.7E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1077 2.8E-174 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532:SF51 25 188 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532:SF51 205 547 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 PANTHER PTHR11532:SF51 606 1075 2.6E-168 T 23-04-2016 NIAKO_RS35280 7e03dcc449ae50cf6a2f75312fa9a1d4 1077 Pfam PF13715 CarboxypepD_reg-like domain 25 106 4.6E-16 T 23-04-2016 NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 Pfam PF00313 'Cold-shock' DNA-binding domain 88 146 1.3E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 PRINTS PR00050 Cold shock protein signature 121 139 2.1E-6 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 PRINTS PR00050 Cold shock protein signature 89 104 2.1E-6 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 SMART SM00357 88 148 7.6E-13 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 Gene3D G3DSA:2.40.50.140 88 148 1.4E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS15615 c1bfe2dd20ec173fcbb806ed7f478571 149 SUPERFAMILY SSF50249 87 147 1.25E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 Pfam PF07143 CrtC N-terminal lipocalin domain 43 207 1.8E-17 T 23-04-2016 IPR010791 AttH domain NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 Pfam PF17186 Lipocalin-like domain 215 350 1.6E-20 T 23-04-2016 IPR033451 AttH, lipocalin-like domain NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 Gene3D G3DSA:2.40.370.10 216 350 1.0E-20 T 23-04-2016 IPR023374 AttH-like domain NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 SUPERFAMILY SSF159245 22 350 4.84E-49 T 23-04-2016 NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 PANTHER PTHR38591 23 350 3.3E-27 T 23-04-2016 NIAKO_RS07370 7d05df61c194374e530d45dbe5a2bf22 352 Gene3D G3DSA:2.40.370.10 35 207 3.0E-26 T 23-04-2016 IPR023374 AttH-like domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:2.70.20.10 313 447 1.8E-27 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:2.70.20.10 214 307 1.9E-22 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF13368 Topoisomerase C-terminal repeat 718 761 5.6E-5 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF13368 Topoisomerase C-terminal repeat 600 661 1.3E-15 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF13368 Topoisomerase C-terminal repeat 662 710 1.7E-13 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF01751 Toprim domain 5 113 1.5E-28 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 494 4.3E-184 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PANTHER PTHR11390:SF27 519 616 6.6E-268 T 23-04-2016 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PANTHER PTHR11390:SF27 1 489 6.6E-268 T 23-04-2016 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 SUPERFAMILY SSF56712 3 487 2.49E-174 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 SUPERFAMILY SSF56712 519 584 2.49E-174 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:3.40.50.140 1 134 3.1E-45 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 285 294 2.9E-34 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 356 372 2.9E-34 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 2.9E-34 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 2.9E-34 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 465 479 2.9E-34 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 280 294 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 671 49.898 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 SMART SM00493 3 103 9.0E-28 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PANTHER PTHR11390 519 616 6.6E-268 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 PANTHER PTHR11390 1 489 6.6E-268 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 SMART SM00436 104 195 7.6E-43 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF01131 DNA topoisomerase 507 570 4.9E-9 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Pfam PF01131 DNA topoisomerase 129 492 1.2E-105 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 SMART SM00437 243 494 3.3E-97 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:1.10.460.10 519 584 2.0E-51 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:1.10.460.10 448 487 2.0E-51 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIAKO_RS07935 aaa94f2929ea60254a1479d457d5cf3e 866 Gene3D G3DSA:1.10.460.10 135 185 2.0E-51 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 SUPERFAMILY SSF48208 283 760 1.45E-15 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 PANTHER PTHR12143:SF22 5 774 2.4E-96 T 23-04-2016 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 Gene3D G3DSA:3.30.2080.10 631 774 5.0E-43 T 23-04-2016 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 PANTHER PTHR12143 5 774 2.4E-96 T 23-04-2016 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 Pfam PF07971 Glycosyl hydrolase family 92 256 772 4.9E-127 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 Gene3D G3DSA:1.20.1610.10 469 630 1.8E-44 T 23-04-2016 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 773 5.8E-124 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 Gene3D G3DSA:2.70.98.10 26 339 3.0E-80 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS02630 52691f7f5273f387cf3e710f28d4df5d 779 Gene3D G3DSA:1.20.1050.60 372 459 3.3E-17 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 305 2.9E-66 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Gene3D G3DSA:3.40.50.1100 43 147 2.5E-36 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Pfam PF00571 CBS domain 344 390 1.3E-7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 SUPERFAMILY SSF54631 340 450 1.06E-13 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 SUPERFAMILY SSF53686 2 327 4.71E-94 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Gene3D G3DSA:3.40.50.1100 2 42 9.5E-64 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Gene3D G3DSA:3.40.50.1100 153 323 9.5E-64 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 PANTHER PTHR10314:SF8 2 361 2.6E-130 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 PANTHER PTHR10314 2 361 2.6E-130 T 23-04-2016 NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 SMART SM00116 344 391 0.004 T 23-04-2016 IPR000644 CBS domain NIAKO_RS22190 73963eaeeca441700b859baa01b67c48 455 Gene3D G3DSA:3.10.580.10 327 450 1.3E-14 T 23-04-2016 NIAKO_RS23535 bd1c7b18697d417d5f3c6689cb248cb1 142 Pfam PF00072 Response regulator receiver domain 7 121 7.1E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23535 bd1c7b18697d417d5f3c6689cb248cb1 142 PANTHER PTHR26402 7 120 5.8E-25 T 23-04-2016 NIAKO_RS23535 bd1c7b18697d417d5f3c6689cb248cb1 142 SMART SM00448 5 125 4.3E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23535 bd1c7b18697d417d5f3c6689cb248cb1 142 SUPERFAMILY SSF52172 4 130 3.27E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23535 bd1c7b18697d417d5f3c6689cb248cb1 142 Gene3D G3DSA:3.40.50.2300 3 132 3.0E-30 T 23-04-2016 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 Gene3D G3DSA:3.30.1330.60 480 586 8.5E-35 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 ProSitePatterns PS01068 OmpA-like domain. 518 562 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PANTHER PTHR30128 484 586 5.3E-38 T 23-04-2016 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 SUPERFAMILY SSF103088 479 586 1.29E-33 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01021 OMPA domain signature 531 547 2.6E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01021 OMPA domain signature 516 531 2.6E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01021 OMPA domain signature 486 508 2.6E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 Pfam PF00691 OmpA family 486 580 1.9E-22 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 569 588 8.0E-12 T 23-04-2016 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 531 548 8.0E-12 T 23-04-2016 NIAKO_RS37295 ae6e0aac79e89d9655efbd0cce55e93f 588 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 549 568 8.0E-12 T 23-04-2016 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 Pfam PF00589 Phage integrase family 119 289 1.3E-35 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 304 29.374 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 Gene3D G3DSA:1.10.150.130 10 105 2.7E-25 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 3.7E-20 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 SUPERFAMILY SSF56349 14 297 8.83E-51 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 PANTHER PTHR30349 13 302 4.2E-75 T 23-04-2016 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 Gene3D G3DSA:1.10.443.10 119 297 9.8E-45 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS24265 8d86adc8afb163b375bca8472bb70c53 304 PANTHER PTHR30349:SF5 13 302 4.2E-75 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:1.10.287.130 659 732 8.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF55781 402 569 6.67E-24 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF158472 322 367 1.31E-6 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 863 4.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 849 4.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 894 907 4.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 888 4.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00304 322 374 2.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF52172 1081 1189 1.39E-22 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00065 437 579 1.4E-4 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF13185 GAF domain 440 569 1.9E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PANTHER PTHR24423 1226 1345 1.5E-137 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PANTHER PTHR24423 619 637 1.5E-137 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PANTHER PTHR24423 666 951 1.5E-137 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 PANTHER PTHR24423 1 8 1.5E-137 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:3.40.50.2300 1223 1345 4.8E-42 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00387 784 910 4.9E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF08376 Nitrate and nitrite sensing 57 279 1.4E-23 T 23-04-2016 IPR013587 Nitrate/nitrite sensing protein NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:3.40.50.2300 1081 1189 8.3E-25 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00448 959 1069 1.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00448 1227 1341 4.3E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00448 1081 1195 1.5E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF52172 1225 1345 3.27E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:3.30.450.40 422 573 9.4E-15 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:3.40.50.2300 956 1065 7.5E-25 T 23-04-2016 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF00672 HAMP domain 303 367 1.6E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Gene3D G3DSA:3.30.565.10 737 910 3.3E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF47384 656 737 1.55E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF52172 957 1073 2.28E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SUPERFAMILY SSF55874 725 908 9.69E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF00072 Response regulator receiver domain 1229 1340 3.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF00072 Response regulator receiver domain 961 1065 3.3E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF00072 Response regulator receiver domain 1084 1189 2.2E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 SMART SM00388 668 736 6.7E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 784 908 3.9E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13455 18cfa0c262dd8a81317f62e5b4a3d049 1347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 736 2.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Gene3D G3DSA:1.25.60.10 4 124 2.6E-21 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Gene3D G3DSA:1.10.357.20 274 454 1.3E-60 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 SUPERFAMILY SSF54631 130 270 4.55E-28 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 454 1.9E-104 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 SUPERFAMILY SSF158791 5 128 9.29E-23 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Gene3D G3DSA:3.10.580.10 125 257 1.9E-17 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 SMART SM00924 29 131 5.0E-24 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 PANTHER PTHR11911 108 414 9.3E-38 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 PANTHER PTHR11911:SF23 108 414 9.3E-38 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 SUPERFAMILY SSF161093 274 453 1.7E-49 T 23-04-2016 NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Pfam PF00571 CBS domain 131 179 4.6E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Pfam PF00571 CBS domain 195 246 3.9E-7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Pfam PF03448 MgtE intracellular N domain 31 128 1.3E-19 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NIAKO_RS01655 22e50a890a86e4ce46a5a72eae5482c4 458 Pfam PF01769 Divalent cation transporter 317 447 5.0E-30 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 PIRSF PIRSF005902 1 257 1.0E-78 T 23-04-2016 IPR001130 TatD family GO:0016788 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 SUPERFAMILY SSF51556 5 256 6.63E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 PANTHER PTHR10060 5 256 5.6E-111 T 23-04-2016 IPR001130 TatD family GO:0016788 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 Pfam PF01026 TatD related DNase 6 255 9.2E-73 T 23-04-2016 IPR001130 TatD family GO:0016788 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 5 256 5.7E-78 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 Gene3D G3DSA:3.20.20.140 2 256 1.0E-88 T 23-04-2016 NIAKO_RS27675 61574649a1790dc701618b7a3833655d 257 PANTHER PTHR10060:SF21 5 256 5.6E-111 T 23-04-2016 NIAKO_RS36020 352a5f7966cbac446bed7b873655456b 495 Pfam PF01098 Cell cycle protein 33 407 1.5E-74 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS36020 352a5f7966cbac446bed7b873655456b 495 PANTHER PTHR30474 10 227 1.7E-96 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS36020 352a5f7966cbac446bed7b873655456b 495 PANTHER PTHR30474 248 413 1.7E-96 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS36020 352a5f7966cbac446bed7b873655456b 495 PANTHER PTHR30474:SF2 10 227 1.7E-96 T 23-04-2016 NIAKO_RS36020 352a5f7966cbac446bed7b873655456b 495 PANTHER PTHR30474:SF2 248 413 1.7E-96 T 23-04-2016 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 Gene3D G3DSA:3.40.50.1970 7 183 7.4E-49 T 23-04-2016 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 PANTHER PTHR11496 1 382 1.0E-110 T 23-04-2016 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 SUPERFAMILY SSF56796 8 381 5.1E-114 T 23-04-2016 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 373 3.6E-114 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 PANTHER PTHR11496:SF68 1 382 1.0E-110 T 23-04-2016 NIAKO_RS17720 1940185b495e345fefe3a77a35ac3c4f 382 Gene3D G3DSA:1.20.1090.10 184 382 4.0E-63 T 23-04-2016 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 SUPERFAMILY SSF55869 48 106 8.63E-19 T 23-04-2016 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 Gene3D G3DSA:1.20.120.380 256 340 3.4E-21 T 23-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 109 321 8.9E-38 T 23-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 169 183 6.3E-5 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 255 269 6.3E-5 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 146 165 6.3E-5 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 190 206 6.3E-5 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 SUPERFAMILY SSF56349 102 325 3.83E-61 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS28780 76911757fb06d62551448a650e00a8b8 362 Gene3D G3DSA:3.90.15.10 112 243 2.4E-38 T 23-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Pfam PF00158 Sigma-54 interaction domain 142 308 2.6E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 SUPERFAMILY SSF52172 4 186 1.57E-35 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 PANTHER PTHR32071 4 441 2.7E-187 T 23-04-2016 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Pfam PF00072 Response regulator receiver domain 5 111 1.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 441 1.2E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 1.2E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Gene3D G3DSA:3.40.50.2300 3 127 8.9E-31 T 23-04-2016 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Pfam PF02954 Bacterial regulatory protein, Fis family 399 439 2.4E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Gene3D G3DSA:1.10.8.60 317 383 1.9E-25 T 23-04-2016 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 SMART SM00382 162 306 2.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 SUPERFAMILY SSF46689 379 441 6.81E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Gene3D G3DSA:1.10.10.60 384 441 4.3E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 Gene3D G3DSA:3.40.50.300 138 314 2.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 SMART SM00448 3 114 7.8E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 SUPERFAMILY SSF52540 141 384 1.02E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20310 350c92456d7f9c08089f36faea63b9b0 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 Pfam PF00072 Response regulator receiver domain 8 118 5.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 PANTHER PTHR24423:SF486 8 160 2.2E-53 T 23-04-2016 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 Gene3D G3DSA:1.10.10.60 154 202 2.7E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 SMART SM00342 168 251 2.9E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 Pfam PF12833 Helix-turn-helix domain 174 251 2.7E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 SMART SM00448 6 118 1.9E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 Gene3D G3DSA:1.10.10.60 205 250 2.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 SUPERFAMILY SSF52172 6 132 1.85E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 PANTHER PTHR24423 8 160 2.2E-53 T 23-04-2016 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 SUPERFAMILY SSF46689 205 251 2.8E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 Gene3D G3DSA:3.40.50.2300 4 130 3.3E-40 T 23-04-2016 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 6.13E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS24530 7598e1cbac3110092fac95793334175a 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 6.13E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 Gene3D G3DSA:3.40.710.10 403 731 5.9E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 Gene3D G3DSA:3.40.710.10 234 327 5.9E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 Gene3D G3DSA:1.10.3810.10 57 233 2.0E-58 T 23-04-2016 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 PANTHER PTHR32282:SF11 1 324 2.1E-160 T 23-04-2016 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 PANTHER PTHR32282:SF11 404 693 2.1E-160 T 23-04-2016 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 Pfam PF00905 Penicillin binding protein transpeptidase domain 412 655 4.3E-25 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 Pfam PF00912 Transglycosylase 64 232 2.8E-52 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 SUPERFAMILY SSF53955 48 260 3.09E-61 T 23-04-2016 IPR023346 Lysozyme-like domain NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 SUPERFAMILY SSF56601 266 327 2.41E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 SUPERFAMILY SSF56601 214 236 2.41E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 SUPERFAMILY SSF56601 405 725 2.41E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 PANTHER PTHR32282 1 324 2.1E-160 T 23-04-2016 NIAKO_RS31360 7cec1aba52d9ee76a088607fb546dba7 744 PANTHER PTHR32282 404 693 2.1E-160 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 158 171 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PANTHER PTHR19375 7 328 4.8E-141 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 Pfam PF06723 MreB/Mbl protein 9 335 1.1E-124 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 131 150 1.2E-41 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 1.2E-41 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 1.2E-41 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 186 206 1.2E-41 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 301 327 1.2E-41 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 Gene3D G3DSA:3.30.420.40 160 185 1.6E-30 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 Gene3D G3DSA:3.30.420.40 264 318 1.6E-30 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 PANTHER PTHR19375:SF117 7 328 4.8E-141 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 SUPERFAMILY SSF53067 9 147 9.07E-31 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 335 2.8E-127 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 SUPERFAMILY SSF53067 149 334 4.75E-45 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 Gene3D G3DSA:3.90.640.10 186 259 4.3E-26 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 Gene3D G3DSA:3.30.420.40 9 159 5.4E-35 T 23-04-2016 NIAKO_RS33840 ddf743c52581268b244b89b55c6b311e 341 SMART SM00268 8 338 0.0091 T 23-04-2016 IPR004000 Actin family NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 PIRSF PIRSF002181 5 146 3.0E-50 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 Pfam PF00572 Ribosomal protein L13 19 143 3.4E-56 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 11 145 5.1E-60 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 146 27.518 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 PANTHER PTHR11545 6 145 2.6E-67 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 Gene3D G3DSA:3.90.1180.10 10 145 1.1E-60 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 ProSitePatterns PS00783 Ribosomal protein L13 signature. 110 132 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29705 8da475338c0e3bb704654ed85520e1ff 147 SUPERFAMILY SSF52161 7 144 2.22E-56 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 Gene3D G3DSA:1.10.10.60 276 301 3.9E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 SMART SM00342 218 302 3.2E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 SUPERFAMILY SSF46689 269 303 2.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 Gene3D G3DSA:1.10.530.40 215 275 5.5E-4 T 23-04-2016 IPR023347 Lysozyme domain GO:0003796 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 PANTHER PTHR11019:SF126 213 301 1.6E-13 T 23-04-2016 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 PANTHER PTHR11019 213 301 1.6E-13 T 23-04-2016 NIAKO_RS07005 af9ad317038951363cad8f8f8b98a345 308 Pfam PF12833 Helix-turn-helix domain 226 303 2.5E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 Gene3D G3DSA:2.60.40.10 221 307 1.1E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 Gene3D G3DSA:2.60.40.10 414 501 4.5E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SUPERFAMILY SSF49265 209 307 8.64E-5 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SMART SM00060 415 498 190.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SMART SM00060 513 595 0.015 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SMART SM00060 210 301 11.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SUPERFAMILY SSF49265 513 699 2.46E-12 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 Gene3D G3DSA:2.60.40.10 525 603 4.4E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 Gene3D G3DSA:2.60.40.10 624 696 2.0E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS08385 d8a3f5aa3fc4d334478812c1f1b661ac 702 SUPERFAMILY SSF49265 331 458 5.22E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 Gene3D G3DSA:1.20.1440.60 7 122 8.2E-35 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 14 121 1.8E-32 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 PANTHER PTHR38471:SF2 6 127 1.7E-26 T 23-04-2016 NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 Pfam PF05635 23S rRNA-intervening sequence protein 10 115 2.1E-34 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 PANTHER PTHR38471 6 127 1.7E-26 T 23-04-2016 NIAKO_RS30510 ea19ee4fed9de459b1512f8d6c526153 128 SUPERFAMILY SSF158446 8 121 3.14E-36 T 23-04-2016 NIAKO_RS17315 5e21f6c92d3274cfe85a48044251527b 152 SUPERFAMILY SSF55961 1 143 1.38E-18 T 23-04-2016 NIAKO_RS17315 5e21f6c92d3274cfe85a48044251527b 152 Gene3D G3DSA:3.30.530.20 2 142 8.6E-8 T 23-04-2016 IPR023393 START-like domain NIAKO_RS17315 5e21f6c92d3274cfe85a48044251527b 152 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 143 6.0E-12 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 PANTHER PTHR12143 547 661 1.7E-67 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 PANTHER PTHR12143 1 526 1.7E-67 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Gene3D G3DSA:1.20.1050.60 306 385 3.2E-11 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Gene3D G3DSA:2.70.98.10 20 282 1.5E-47 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 SUPERFAMILY SSF48208 233 653 4.19E-13 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Pfam PF07971 Glycosyl hydrolase family 92 208 543 1.5E-61 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Pfam PF07971 Glycosyl hydrolase family 92 546 655 3.3E-30 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 PANTHER PTHR12143:SF22 547 661 1.7E-67 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 PANTHER PTHR12143:SF22 1 526 1.7E-67 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Gene3D G3DSA:3.30.2080.10 499 667 1.1E-58 T 23-04-2016 NIAKO_RS19865 9fe777166e882b7974d0a827983ade49 674 Gene3D G3DSA:1.20.1610.10 397 498 5.7E-23 T 23-04-2016 NIAKO_RS01055 5dcb6cb12faace9bd1ca775308d51a2d 236 SUPERFAMILY SSF52266 54 235 1.04E-45 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01055 5dcb6cb12faace9bd1ca775308d51a2d 236 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 60 223 6.3E-26 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01055 5dcb6cb12faace9bd1ca775308d51a2d 236 Gene3D G3DSA:3.40.50.1110 56 235 3.5E-50 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01055 5dcb6cb12faace9bd1ca775308d51a2d 236 PANTHER PTHR30383 57 233 2.7E-37 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 SUPERFAMILY SSF143865 34 300 1.7E-68 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 Pfam PF01544 CorA-like Mg2+ transporter protein 74 363 1.1E-66 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 SUPERFAMILY SSF144083 302 364 3.79E-17 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 Gene3D G3DSA:3.30.460.20 30 177 1.8E-38 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 Gene3D G3DSA:1.20.58.340 290 367 2.4E-23 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 PANTHER PTHR21535 77 367 1.8E-51 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 Gene3D G3DSA:1.20.58.340 178 288 5.4E-35 T 23-04-2016 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 74 367 4.6E-82 T 23-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 NIAKO_RS31245 6f755d47439a9be63c900c86fcf2eac3 367 PANTHER PTHR21535:SF33 77 367 1.8E-51 T 23-04-2016 NIAKO_RS29135 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF02371 Transposase IS116/IS110/IS902 family 148 233 2.8E-22 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NIAKO_RS29135 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF01548 Transposase 4 78 1.8E-10 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NIAKO_RS29135 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055:SF3 18 267 3.5E-39 T 23-04-2016 NIAKO_RS29135 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055 18 267 3.5E-39 T 23-04-2016 NIAKO_RS09000 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF02371 Transposase IS116/IS110/IS902 family 148 233 2.8E-22 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NIAKO_RS09000 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF01548 Transposase 4 78 1.8E-10 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NIAKO_RS09000 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055:SF3 18 267 3.5E-39 T 23-04-2016 NIAKO_RS09000 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055 18 267 3.5E-39 T 23-04-2016 NIAKO_RS19500 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF02371 Transposase IS116/IS110/IS902 family 148 233 2.8E-22 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NIAKO_RS19500 33e5a21b48510ab36a74613cf04c23f0 272 Pfam PF01548 Transposase 4 78 1.8E-10 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NIAKO_RS19500 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055:SF3 18 267 3.5E-39 T 23-04-2016 NIAKO_RS19500 33e5a21b48510ab36a74613cf04c23f0 272 PANTHER PTHR33055 18 267 3.5E-39 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Gene3D G3DSA:2.170.130.10 199 313 1.1E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Pfam PF07715 TonB-dependent Receptor Plug Domain 203 313 4.4E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Pfam PF13715 CarboxypepD_reg-like domain 115 195 2.4E-14 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Gene3D G3DSA:2.40.170.20 386 865 6.6E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Gene3D G3DSA:2.40.170.20 915 1056 6.6E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Gene3D G3DSA:2.40.170.20 314 333 6.6E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 SUPERFAMILY SSF49464 114 173 1.22E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532 534 846 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532 868 1054 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532 108 447 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Pfam PF07660 Secretin and TonB N terminus short domain 46 95 4.7E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 113 1056 5.4E-211 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 289 319 7.1E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532:SF57 534 846 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532:SF57 868 1054 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 PANTHER PTHR11532:SF57 108 447 3.8E-205 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 SUPERFAMILY SSF56935 377 466 8.24E-91 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 SUPERFAMILY SSF56935 908 1056 8.24E-91 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 SUPERFAMILY SSF56935 193 337 8.24E-91 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 SUPERFAMILY SSF56935 494 838 8.24E-91 T 23-04-2016 NIAKO_RS16525 bb412f2bdd18f7d1b4cb6bbc2fbbaac9 1057 Gene3D G3DSA:2.60.40.1120 115 198 1.2E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 228 4.6E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 SUPERFAMILY SSF49464 25 105 2.88E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 PANTHER PTHR30069 8 350 1.4E-15 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 PANTHER PTHR30069 533 683 1.4E-15 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 PANTHER PTHR30069:SF2 8 350 1.4E-15 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 PANTHER PTHR30069:SF2 533 683 1.4E-15 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Gene3D G3DSA:2.40.170.20 232 319 1.1E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Gene3D G3DSA:2.40.170.20 413 948 1.1E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Gene3D G3DSA:2.60.40.1120 26 97 6.9E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Pfam PF13715 CarboxypepD_reg-like domain 27 110 1.4E-16 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 SUPERFAMILY SSF56935 412 522 2.86E-60 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 SUPERFAMILY SSF56935 557 685 2.86E-60 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 SUPERFAMILY SSF56935 732 948 2.86E-60 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 SUPERFAMILY SSF56935 108 295 2.86E-60 T 23-04-2016 NIAKO_RS07605 07671cf1f67a3cc41370001d9ff877d8 950 Gene3D G3DSA:2.170.130.10 106 231 2.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16825 29ee20f7a0445cbcba1a2f8efd6fd9be 189 SUPERFAMILY SSF69118 18 176 2.04E-24 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS16825 29ee20f7a0445cbcba1a2f8efd6fd9be 189 Gene3D G3DSA:1.20.1290.10 46 176 7.3E-23 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 SUPERFAMILY SSF63411 525 738 3.67E-17 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Gene3D G3DSA:3.30.830.10 767 928 1.0E-11 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Gene3D G3DSA:3.30.830.10 340 469 8.2E-9 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Pfam PF05193 Peptidase M16 inactive domain 213 393 7.8E-22 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Pfam PF05193 Peptidase M16 inactive domain 693 871 3.2E-13 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 SUPERFAMILY SSF63411 305 475 2.5E-11 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Pfam PF00675 Insulinase (Peptidase family M16) 55 175 3.2E-23 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 PANTHER PTHR11851 10 886 6.4E-139 T 23-04-2016 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 SUPERFAMILY SSF63411 759 938 1.65E-17 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 SUPERFAMILY SSF63411 39 259 1.75E-40 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Gene3D G3DSA:3.30.830.10 529 739 8.9E-11 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 Gene3D G3DSA:3.30.830.10 32 264 3.4E-48 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS22240 5a6fd68e7d1a895c3b8f28196f3ae038 952 PANTHER PTHR11851:SF144 10 886 6.4E-139 T 23-04-2016 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 272 282 - T 23-04-2016 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 PANTHER PTHR31490 57 367 7.4E-88 T 23-04-2016 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 Pfam PF00331 Glycosyl hydrolase family 10 53 364 1.1E-104 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 SUPERFAMILY SSF51445 48 366 1.32E-102 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 PRINTS PR00134 Glycosyl hydrolase family 10 signature 122 134 1.5E-14 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 PRINTS PR00134 Glycosyl hydrolase family 10 signature 166 177 1.5E-14 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 PRINTS PR00134 Glycosyl hydrolase family 10 signature 210 221 1.5E-14 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 PRINTS PR00134 Glycosyl hydrolase family 10 signature 239 251 1.5E-14 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 SMART SM00633 91 366 2.6E-96 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS11920 f54baa77e6c9bc36c6d307c086414ea5 367 Gene3D G3DSA:3.20.20.80 53 367 1.7E-106 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 PANTHER PTHR22981:SF7 3 277 1.2E-30 T 23-04-2016 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 SUPERFAMILY SSF51735 3 157 4.51E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 PANTHER PTHR22981 3 277 1.2E-30 T 23-04-2016 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 Gene3D G3DSA:1.10.1040.10 161 277 9.8E-13 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 1.4E-27 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 SUPERFAMILY SSF48179 159 277 8.96E-13 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 Gene3D G3DSA:3.40.50.720 3 159 4.2E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30305 21de535f628c9bf2c5e37c3b8d4a9f96 279 PIRSF PIRSF000103 3 279 4.1E-46 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PANTHER PTHR24423:SF518 78 339 3.7E-47 T 23-04-2016 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 Pfam PF01590 GAF domain 69 230 2.2E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 Pfam PF00360 Phytochrome region 251 425 6.9E-46 T 23-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PRINTS PR01033 Phytochrome signature 352 371 9.8E-14 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PRINTS PR01033 Phytochrome signature 82 101 9.8E-14 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PRINTS PR01033 Phytochrome signature 169 190 9.8E-14 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PRINTS PR01033 Phytochrome signature 386 404 9.8E-14 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PRINTS PR01033 Phytochrome signature 267 287 9.8E-14 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 SUPERFAMILY SSF55781 243 425 2.33E-44 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 SUPERFAMILY SSF55781 49 235 9.38E-50 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 PANTHER PTHR24423 78 339 3.7E-47 T 23-04-2016 NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 Gene3D G3DSA:3.30.450.40 50 236 2.6E-12 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS29370 d07f827d3f91ecc4babd6c036b7c0447 428 SMART SM00065 67 241 1.1E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Pfam PF00476 DNA polymerase family A 573 950 3.8E-149 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 176 1.1E-49 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SUPERFAMILY SSF47807 182 291 1.11E-33 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:1.10.150.20 194 253 8.8E-29 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PANTHER PTHR10133:SF27 1 289 0.0 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PANTHER PTHR10133:SF27 344 952 0.0 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 TIGRFAM TIGR00593 pola: DNA polymerase I 11 953 9.9E-293 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 ProSitePatterns PS00447 DNA polymerase family A signature. 777 796 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SUPERFAMILY SSF88723 8 157 5.23E-47 T 23-04-2016 IPR029060 PIN domain-like NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SMART SM00475 8 269 6.3E-114 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:3.30.420.10 356 562 1.0E-62 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SMART SM00279 181 216 1.3E-13 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:1.20.1060.10 564 684 2.4E-33 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:3.30.70.370 841 953 6.2E-62 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:3.30.70.370 685 734 6.2E-62 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SMART SM00482 708 915 2.2E-109 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:1.10.150.20 735 840 5.2E-33 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Gene3D G3DSA:3.40.50.1010 8 193 9.4E-59 T 23-04-2016 IPR029060 PIN domain-like NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SMART SM00474 358 539 5.7E-30 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 182 273 4.3E-31 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 Pfam PF01612 3'-5' exonuclease 358 538 1.1E-32 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SUPERFAMILY SSF53098 365 539 6.51E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 766 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 777 802 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 898 911 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 884 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 699 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 715 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 836 847 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 746 3.0E-70 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 SUPERFAMILY SSF56672 544 953 2.78E-146 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PANTHER PTHR10133 1 289 0.0 T 23-04-2016 NIAKO_RS30950 3bd0046733d4f5a833c1b3c27123521e 953 PANTHER PTHR10133 344 952 0.0 T 23-04-2016 NIAKO_RS27735 a3acc878945dccc053aea8701e81c4e9 301 PANTHER PTHR30238 2 301 2.5E-116 T 23-04-2016 NIAKO_RS27735 a3acc878945dccc053aea8701e81c4e9 301 Pfam PF03741 Integral membrane protein TerC family 70 275 4.5E-48 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 NIAKO_RS27735 a3acc878945dccc053aea8701e81c4e9 301 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 301 1.4E-101 T 23-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 NIAKO_RS27735 a3acc878945dccc053aea8701e81c4e9 301 PANTHER PTHR30238:SF0 2 301 2.5E-116 T 23-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 NIAKO_RS12835 f8899deb9af71ba9ac1bd0507cd95890 212 PANTHER PTHR21666 88 201 3.1E-21 T 23-04-2016 NIAKO_RS12835 f8899deb9af71ba9ac1bd0507cd95890 212 Gene3D G3DSA:3.90.1720.10 81 200 2.9E-33 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS12835 f8899deb9af71ba9ac1bd0507cd95890 212 SUPERFAMILY SSF54001 79 200 1.47E-30 T 23-04-2016 NIAKO_RS12835 f8899deb9af71ba9ac1bd0507cd95890 212 Pfam PF00877 NlpC/P60 family 91 198 4.0E-25 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 Gene3D G3DSA:3.20.20.70 1 297 1.4E-40 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 PANTHER PTHR11228 1 175 1.1E-28 T 23-04-2016 NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 PANTHER PTHR11228 197 296 1.1E-28 T 23-04-2016 NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 Pfam PF13353 4Fe-4S single cluster domain 5 99 6.6E-5 T 23-04-2016 NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 SUPERFAMILY SSF102114 1 297 2.16E-39 T 23-04-2016 NIAKO_RS21265 dda4c3d83c7c6469bd9d42df39d77b70 308 Pfam PF13186 Iron-sulfur cluster-binding domain 237 296 2.0E-11 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 PANTHER PTHR22925 22 304 2.1E-64 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 PANTHER PTHR22925:SF42 22 304 2.1E-64 T 23-04-2016 NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 SUPERFAMILY SSF75005 22 312 1.12E-76 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 SUPERFAMILY SSF49899 313 454 1.58E-7 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 Pfam PF04616 Glycosyl hydrolases family 43 22 298 8.3E-68 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 Gene3D G3DSA:2.60.120.200 316 455 7.3E-8 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS00175 c1d537717eab55f3eb88ad7d41d91057 514 Gene3D G3DSA:2.115.10.20 22 311 2.6E-79 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Pfam PF13361 UvrD-like helicase C-terminal domain 608 679 2.9E-14 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Pfam PF13361 UvrD-like helicase C-terminal domain 498 601 1.8E-7 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Gene3D G3DSA:3.40.50.300 232 370 5.2E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Gene3D G3DSA:3.40.50.300 402 479 5.2E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Pfam PF00580 UvrD/REP helicase N-terminal domain 244 479 2.0E-10 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 Gene3D G3DSA:3.40.50.300 499 688 2.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 PANTHER PTHR11070 168 681 8.9E-44 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS23660 30e531c0ef7259523a7bbfc5fd78c1aa 690 SUPERFAMILY SSF52540 226 684 8.18E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SMART SM00448 1081 1193 3.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF63829 35 235 1.31E-6 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:3.40.50.2300 1082 1205 5.9E-34 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SMART SM00388 809 874 2.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:1.10.10.60 1278 1328 7.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF52172 1083 1207 1.42E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:2.120.10.30 520 629 1.2E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:2.120.10.30 171 210 2.0E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:2.120.10.30 354 511 5.4E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:2.120.10.30 243 321 2.0E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF63829 192 465 8.28E-18 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF00512 His Kinase A (phospho-acceptor) domain 812 873 1.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1279 1321 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF07495 Y_Y_Y domain 692 754 2.4E-12 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423 158 583 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423 1067 1234 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423 645 1035 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF00072 Response regulator receiver domain 1084 1193 6.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF12833 Helix-turn-helix domain 1249 1327 5.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 957 971 3.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1010 3.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1016 1029 3.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 975 985 3.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:1.10.287.130 801 859 2.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF55874 863 1030 2.1E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF63829 447 627 1.05E-10 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423:SF487 158 583 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423:SF487 1067 1234 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 PANTHER PTHR24423:SF487 645 1035 1.1E-111 T 23-04-2016 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF47384 800 872 5.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 920 1030 1.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SUPERFAMILY SSF46689 1278 1329 4.93E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Gene3D G3DSA:3.30.565.10 860 1030 3.3E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF07494 Two component regulator propeller 517 537 0.0087 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF07494 Two component regulator propeller 558 580 0.0029 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF07494 Two component regulator propeller 32 55 8.4E-6 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 Pfam PF07494 Two component regulator propeller 296 316 0.0081 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SMART SM00342 1242 1325 1.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11680 8ce189c0139b883c6c5499cfaea8e29f 1338 SMART SM00387 920 1032 6.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 SUPERFAMILY SSF55205 2 418 8.04E-104 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 PIRSF PIRSF000505 1 423 7.6E-123 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 Gene3D G3DSA:3.65.10.10 19 202 1.3E-37 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 412 7.8E-89 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 PANTHER PTHR21090 5 418 4.3E-116 T 23-04-2016 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 418 4.4E-101 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 419 27.716 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 PANTHER PTHR21090:SF5 5 418 4.3E-116 T 23-04-2016 NIAKO_RS22095 74d6b8a01650b2e182b826d1842318df 430 Gene3D G3DSA:3.65.10.10 203 419 7.3E-55 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 Hamap MF_00928 4-O-beta-D-mannosyl-D-glucose phosphorylase. 4 390 70.078 T 23-04-2016 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase MetaCyc: PWY-7456 NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 PIRSF PIRSF016202 20 368 8.4E-92 T 23-04-2016 IPR007184 Mannoside phosphorylase NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 95 363 1.6E-22 T 23-04-2016 IPR007184 Mannoside phosphorylase NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 PANTHER PTHR34106:SF1 8 369 1.5E-147 T 23-04-2016 NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 Gene3D G3DSA:2.115.10.20 17 366 4.4E-93 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 SUPERFAMILY SSF75005 48 372 8.11E-80 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS21535 286d0b2739b04ec1283f7f30c472be26 395 PANTHER PTHR34106 8 369 1.5E-147 T 23-04-2016 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 Gene3D G3DSA:3.40.830.10 13 276 4.4E-86 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 26 256 7.5E-30 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 PANTHER PTHR30096:SF0 4 274 1.4E-91 T 23-04-2016 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 SUPERFAMILY SSF53213 21 275 3.01E-82 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 PIRSF PIRSF006157 16 277 7.0E-83 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 NIAKO_RS07255 2cb9d27c5023319537e1fe2a55661ec4 277 PANTHER PTHR30096 4 274 1.4E-91 T 23-04-2016 NIAKO_RS36130 7c76bf7a01194004b828ff4eb1689236 268 Pfam PF12146 Serine aminopeptidase, S33 74 201 2.6E-18 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS36130 7c76bf7a01194004b828ff4eb1689236 268 Gene3D G3DSA:3.40.50.1820 53 258 3.9E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36130 7c76bf7a01194004b828ff4eb1689236 268 SUPERFAMILY SSF53474 46 253 4.25E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36130 7c76bf7a01194004b828ff4eb1689236 268 PANTHER PTHR12277 12 268 1.3E-36 T 23-04-2016 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 Pfam PF02685 Glucokinase 22 341 2.2E-95 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 Gene3D G3DSA:3.30.420.40 22 89 7.0E-4 T 23-04-2016 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 PANTHER PTHR30514:SF0 15 341 3.0E-76 T 23-04-2016 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 SUPERFAMILY SSF53067 20 344 1.86E-57 T 23-04-2016 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 TIGRFAM TIGR00749 glk: glucokinase 22 339 1.4E-76 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 Gene3D G3DSA:3.40.367.20 119 328 2.3E-64 T 23-04-2016 NIAKO_RS10205 fca7b173f46c96e26b6e83e52f1f05f8 346 PANTHER PTHR30514 15 341 3.0E-76 T 23-04-2016 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 254 356 2.5E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 369 489 4.7E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Pfam PF07730 Histidine kinase 513 571 8.6E-7 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 PANTHER PTHR24423 251 705 5.1E-34 T 23-04-2016 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SUPERFAMILY SSF55785 376 486 4.54E-18 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SUPERFAMILY SSF55874 585 704 6.02E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Pfam PF13426 PAS domain 126 227 0.091 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Gene3D G3DSA:3.30.450.20 250 355 2.0E-11 T 23-04-2016 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SUPERFAMILY SSF55785 126 223 5.41E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Pfam PF08447 PAS fold 393 476 1.8E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SMART SM00387 615 706 0.0014 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 615 705 7.5E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Gene3D G3DSA:3.30.565.10 579 705 3.0E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Gene3D G3DSA:3.30.450.20 126 226 8.6E-7 T 23-04-2016 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SUPERFAMILY SSF55785 246 355 7.68E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Pfam PF08448 PAS fold 254 342 1.7E-7 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SMART SM00091 369 436 3.2E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SMART SM00091 114 181 4.6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SMART SM00091 245 310 4.1E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 SMART SM00091 4 71 140.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05530 8914fcf7b473c3e9e44abec30eea844c 706 Gene3D G3DSA:3.30.450.20 361 482 1.4E-19 T 23-04-2016 NIAKO_RS31615 a96b6af1e2517ca1f95e3ad33b1df2d9 135 Gene3D G3DSA:1.10.10.10 4 110 5.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31615 a96b6af1e2517ca1f95e3ad33b1df2d9 135 Pfam PF03551 Transcriptional regulator PadR-like family 19 89 2.4E-15 T 23-04-2016 IPR005149 Transcription regulator PadR, N-terminal NIAKO_RS31615 a96b6af1e2517ca1f95e3ad33b1df2d9 135 PANTHER PTHR33169:SF3 1 105 2.0E-30 T 23-04-2016 NIAKO_RS31615 a96b6af1e2517ca1f95e3ad33b1df2d9 135 SUPERFAMILY SSF46785 8 108 2.13E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31615 a96b6af1e2517ca1f95e3ad33b1df2d9 135 PANTHER PTHR33169 1 105 2.0E-30 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 2.4E-12 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.4E-12 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.4E-12 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 PANTHER PTHR10617 9 365 1.2E-56 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 Pfam PF01134 Glucose inhibited division protein A 14 169 3.5E-7 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 Gene3D G3DSA:3.30.9.10 167 333 9.8E-35 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 PANTHER PTHR10617:SF101 9 365 1.2E-56 T 23-04-2016 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 Gene3D G3DSA:3.50.50.60 11 166 7.1E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 13 322 4.3E-63 T 23-04-2016 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 SUPERFAMILY SSF51905 274 368 2.54E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30295 3e5daea1f829005167dab2b2040b80bd 385 SUPERFAMILY SSF51905 12 177 2.54E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS29530 0e4ad4e9d2168e62c7de9402e47c0dc9 341 Pfam PF03432 Relaxase/Mobilisation nuclease domain 8 241 1.6E-25 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 470 637 2.5E-47 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 PANTHER PTHR11908 608 794 0.0 T 23-04-2016 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 PANTHER PTHR11908 7 591 0.0 T 23-04-2016 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 724 7.0E-177 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 139 4.2E-29 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.90.1170.50 3 127 4.1E-42 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 186 293 4.4E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 SUPERFAMILY SSF54665 4 162 3.79E-46 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 SUPERFAMILY SSF56003 131 790 5.36E-208 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 374 469 1.7E-65 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 639 793 1.7E-65 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 SMART SM01008 21 139 1.4E-47 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 295 371 1.8E-45 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 Gene3D G3DSA:3.30.365.10 128 185 1.8E-45 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 PANTHER PTHR11908:SF85 608 794 0.0 T 23-04-2016 NIAKO_RS03885 92a1088fb5b54465b2ebce43eb4e7090 794 PANTHER PTHR11908:SF85 7 591 0.0 T 23-04-2016 NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 Gene3D G3DSA:3.40.33.10 195 273 8.2E-5 T 23-04-2016 IPR014044 CAP domain NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 PANTHER PTHR31157 194 301 5.5E-30 T 23-04-2016 NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 Pfam PF00188 Cysteine-rich secretory protein family 203 307 8.7E-10 T 23-04-2016 IPR014044 CAP domain NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 Pfam PF02674 Colicin V production protein 4 145 1.7E-16 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 SUPERFAMILY SSF55797 193 315 7.85E-18 T 23-04-2016 IPR014044 CAP domain NIAKO_RS35885 7f08625be2137833837714d551b07f66 317 PANTHER PTHR31157:SF1 194 301 5.5E-30 T 23-04-2016 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 183 2.6E-52 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 185 31.304 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 Pfam PF02441 Flavoprotein 3 128 2.3E-27 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 Gene3D G3DSA:3.40.50.1950 3 185 6.5E-59 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 SUPERFAMILY SSF52507 3 183 9.29E-49 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 PANTHER PTHR30108:SF2 3 186 2.6E-58 T 23-04-2016 NIAKO_RS22265 3ba02c56cfaec3157248b012cef84a14 188 PANTHER PTHR30108 3 186 2.6E-58 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SUPERFAMILY SSF48452 486 696 9.86E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083 743 840 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083 919 1050 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083 186 215 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083 469 714 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SUPERFAMILY SSF48452 914 1029 1.71E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 Pfam PF17128 Domain of unknown function (DUF5107) 42 345 4.1E-69 T 23-04-2016 IPR033396 Domain of unknown function DUF5107 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 573 606 210.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 914 947 110.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 539 570 59.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 1002 1035 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 607 640 2.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 801 835 0.68 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SMART SM00028 767 800 0.011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 SUPERFAMILY SSF48452 755 898 5.31E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 Pfam PF13181 Tetratricopeptide repeat 960 985 0.021 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 Pfam PF13181 Tetratricopeptide repeat 540 565 0.053 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 Gene3D G3DSA:1.25.40.10 753 1092 2.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 Gene3D G3DSA:1.25.40.10 486 738 4.4E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083:SF414 743 840 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083:SF414 919 1050 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083:SF414 186 215 8.7E-71 T 23-04-2016 NIAKO_RS17480 352895c6119c538afef760338b71cfa0 1107 PANTHER PTHR23083:SF414 469 714 8.7E-71 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 Gene3D G3DSA:1.20.1250.20 269 426 1.6E-16 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 Gene3D G3DSA:1.20.1250.20 486 524 1.6E-16 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 Gene3D G3DSA:1.20.1250.20 15 195 1.1E-31 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 PANTHER PTHR23501:SF69 12 524 7.4E-140 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 Pfam PF07690 Major Facilitator Superfamily 22 418 1.8E-58 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 SUPERFAMILY SSF103473 488 517 7.59E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 SUPERFAMILY SSF103473 255 428 7.59E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 SUPERFAMILY SSF103473 9 200 7.59E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 PANTHER PTHR23501 12 524 7.4E-140 T 23-04-2016 NIAKO_RS07845 9edfec759cec217145beb10f706644ca 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 505 3.8E-128 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NIAKO_RS25335 240a47d368463a73f7104759583e229f 379 Pfam PF05762 VWA domain containing CoxE-like protein 158 369 3.2E-60 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like NIAKO_RS25335 240a47d368463a73f7104759583e229f 379 SUPERFAMILY SSF53300 206 335 4.11E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS25335 240a47d368463a73f7104759583e229f 379 PANTHER PTHR39338 119 377 1.4E-61 T 23-04-2016 NIAKO_RS25335 240a47d368463a73f7104759583e229f 379 PIRSF PIRSF010256 1 379 1.4E-89 T 23-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 NIAKO_RS25335 240a47d368463a73f7104759583e229f 379 PANTHER PTHR39338:SF1 119 377 1.4E-61 T 23-04-2016 NIAKO_RS28570 1722b17a6a17b4f600eb2d51f75c993f 253 PANTHER PTHR41282:SF1 26 253 7.3E-51 T 23-04-2016 NIAKO_RS28570 1722b17a6a17b4f600eb2d51f75c993f 253 Pfam PF12811 Bax inhibitor 1 like 8 250 1.5E-69 T 23-04-2016 IPR010539 Protein of unknown function UCP009160 NIAKO_RS28570 1722b17a6a17b4f600eb2d51f75c993f 253 PIRSF PIRSF009160 3 253 1.9E-72 T 23-04-2016 IPR010539 Protein of unknown function UCP009160 NIAKO_RS28570 1722b17a6a17b4f600eb2d51f75c993f 253 PANTHER PTHR41282 26 253 7.3E-51 T 23-04-2016 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 Gene3D G3DSA:3.30.470.10 4 115 1.7E-22 T 23-04-2016 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 PANTHER PTHR11825:SF55 7 257 2.9E-46 T 23-04-2016 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 Pfam PF01063 Amino-transferase class IV 31 257 2.4E-43 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 Gene3D G3DSA:3.20.10.10 141 273 3.3E-37 T 23-04-2016 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 PANTHER PTHR11825 7 257 2.9E-46 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS24920 5fe26ac5f5eeabef98b5772ac223d58d 278 SUPERFAMILY SSF56752 1 275 2.35E-59 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 PANTHER PTHR26402 14 108 5.2E-17 T 23-04-2016 NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 SUPERFAMILY SSF52172 15 143 3.98E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 Pfam PF00072 Response regulator receiver domain 16 131 1.4E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 PANTHER PTHR26402:SF102 14 108 5.2E-17 T 23-04-2016 NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 SMART SM00448 14 133 2.9E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16315 96f6fef1b9a257e98a342530415bcdfc 146 Gene3D G3DSA:3.40.50.2300 13 139 1.0E-24 T 23-04-2016 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SMART SM00100 139 258 5.4E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SUPERFAMILY SSF46785 276 351 6.53E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Pfam PF00072 Response regulator receiver domain 4 116 4.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SUPERFAMILY SSF52172 1 121 6.69E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Pfam PF00027 Cyclic nucleotide-binding domain 166 243 2.4E-17 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SMART SM00448 2 115 3.9E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 317 332 4.6E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 301 317 4.6E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SMART SM00419 295 343 2.7E-9 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 PANTHER PTHR26402 2 116 7.4E-41 T 23-04-2016 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Gene3D G3DSA:2.60.120.10 139 272 6.9E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Pfam PF13545 Crp-like helix-turn-helix domain 279 349 4.0E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 SUPERFAMILY SSF51206 160 273 9.43E-26 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Gene3D G3DSA:3.40.50.2300 2 122 3.7E-39 T 23-04-2016 NIAKO_RS09170 d07a76d0fdc577f2598e860709756ee0 352 Gene3D G3DSA:1.10.10.10 276 350 8.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS00840 d6804f6226f1de97d43666429e0b9578 677 SUPERFAMILY SSF47781 37 108 2.56E-6 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 Gene3D G3DSA:3.90.950.10 1 190 7.5E-67 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 Pfam PF01725 Ham1 family 3 185 4.9E-51 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 PANTHER PTHR11067 1 196 1.4E-66 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 PANTHER PTHR11067:SF9 1 196 1.4E-66 T 23-04-2016 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 190 41.597 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 188 9.3E-51 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NIAKO_RS23080 0543114b5200de6ef437d5179e7813ae 196 SUPERFAMILY SSF52972 1 190 8.9E-58 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 351 367 2.8E-12 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 234 2.8E-12 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 301 313 2.8E-12 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 Gene3D G3DSA:3.40.50.150 215 383 8.2E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 SUPERFAMILY SSF53335 171 385 1.44E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 PANTHER PTHR22807:SF39 187 382 2.0E-32 T 23-04-2016 NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 PANTHER PTHR22807 187 382 2.0E-32 T 23-04-2016 NIAKO_RS24775 1f14ed7899ad873edae60586a7b384f1 405 Pfam PF01189 16S rRNA methyltransferase RsmB/F 222 385 1.0E-25 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 Pfam PF02687 FtsX-like permease family 287 400 1.4E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 Pfam PF02687 FtsX-like permease family 678 787 3.7E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 Pfam PF12704 MacB-like periplasmic core domain 21 242 2.1E-12 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 PANTHER PTHR30572 287 353 6.7E-61 T 23-04-2016 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 PANTHER PTHR30572 398 798 6.7E-61 T 23-04-2016 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 PANTHER PTHR30572:SF4 287 353 6.7E-61 T 23-04-2016 NIAKO_RS01355 296edb853b25146177355708bb5d2f6d 798 PANTHER PTHR30572:SF4 398 798 6.7E-61 T 23-04-2016 NIAKO_RS34450 0cb65afbf59d56025ad3c9635e28a74f 273 Pfam PF14125 Domain of unknown function (DUF4292) 64 272 1.8E-39 T 23-04-2016 IPR025634 Protein of unknown function DUF4292 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82693 270 326 1.24E-13 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Gene3D G3DSA:3.30.70.1430 45 143 7.8E-21 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82693 140 183 1.24E-13 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PANTHER PTHR32063 5 1026 0.0 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82693 562 660 2.12E-6 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82714 185 266 1.44E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82866 804 1034 6.41E-48 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Pfam PF00873 AcrB/AcrD/AcrF family 8 1029 5.1E-248 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PANTHER PTHR32063:SF12 5 1026 0.0 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 1.8E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Gene3D G3DSA:3.30.2090.10 184 265 1.5E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Gene3D G3DSA:3.30.2090.10 718 802 1.8E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82866 292 503 1.01E-33 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82693 45 128 9.42E-18 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 SUPERFAMILY SSF82714 719 803 3.01E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 5 1034 7.2E-282 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Gene3D G3DSA:1.10.3850.10 810 1033 3.0E-51 T 23-04-2016 NIAKO_RS23520 e3916efd7196cf37fd00c68c19087e44 1040 Gene3D G3DSA:1.10.3850.10 276 504 1.6E-54 T 23-04-2016 NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 Gene3D G3DSA:3.40.50.920 195 324 4.3E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 Gene3D G3DSA:3.40.50.970 3 194 3.5E-88 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 Pfam PF02780 Transketolase, C-terminal domain 194 314 3.6E-41 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 SMART SM00861 5 180 3.5E-60 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 SUPERFAMILY SSF52922 188 324 1.96E-40 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 5.3E-46 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 PANTHER PTHR11624 1 328 4.1E-165 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 SUPERFAMILY SSF52518 3 204 7.85E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS07825 9e59d5b4894ee264b34b1d4ec2a6c610 328 PANTHER PTHR11624:SF11 1 328 4.1E-165 T 23-04-2016 NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 Pfam PF15979 Glycosyl hydrolase family 115 201 532 4.9E-149 T 23-04-2016 IPR031924 Glycosyl hydrolase family 115 NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 66 167 7.6E-7 T 23-04-2016 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 Gene3D G3DSA:3.30.379.10 61 182 3.0E-23 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 SUPERFAMILY SSF55545 62 183 7.06E-13 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 PANTHER PTHR37842 60 958 0.0 T 23-04-2016 NIAKO_RS03655 c98afea9f7066866ac1af8c7e3de468a 969 PANTHER PTHR37842:SF2 60 958 0.0 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 Gene3D G3DSA:2.40.50.100 236 268 5.6E-19 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 Gene3D G3DSA:2.40.50.100 75 105 5.6E-19 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 Pfam PF13437 HlyD family secretion protein 238 340 1.9E-15 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 PANTHER PTHR30386:SF0 1 368 2.7E-77 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 PANTHER PTHR30386 1 368 2.7E-77 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 SUPERFAMILY SSF111369 214 311 2.09E-12 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 SUPERFAMILY SSF111369 75 145 1.06E-9 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 SUPERFAMILY SSF111369 144 203 4.58E-5 T 23-04-2016 NIAKO_RS15245 bc82c14b9bebcbc6e485a13d16af145d 370 Pfam PF13533 Biotin-lipoyl like 75 118 9.9E-11 T 23-04-2016 NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 PANTHER PTHR21091:SF31 176 303 1.5E-32 T 23-04-2016 NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 15 317 1.1E-88 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 Pfam PF02219 Methylenetetrahydrofolate reductase 6 316 4.4E-64 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 SUPERFAMILY SSF51730 4 316 4.12E-81 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 Gene3D G3DSA:3.20.20.220 4 316 2.5E-86 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like NIAKO_RS29955 e6f10be545de5983bf49b90e7d5ed370 317 PANTHER PTHR21091 176 303 1.5E-32 T 23-04-2016 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 SMART SM00342 219 302 1.4E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 Pfam PF12833 Helix-turn-helix domain 226 304 3.5E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 2.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 2.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 SUPERFAMILY SSF46689 258 305 1.43E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 Gene3D G3DSA:1.10.10.60 257 305 1.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 PANTHER PTHR11019 68 310 6.3E-30 T 23-04-2016 NIAKO_RS24065 d0ab8ddc1dddc158ae4aa09ce43f4131 310 PANTHER PTHR11019:SF80 68 310 6.3E-30 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SUPERFAMILY SSF48452 354 382 1.93E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 PANTHER PTHR23083 355 488 6.5E-99 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 PANTHER PTHR23083 191 247 6.5E-99 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 PANTHER PTHR23083 529 859 6.5E-99 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SUPERFAMILY SSF48452 192 246 1.93E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13424 Tetratricopeptide repeat 664 726 6.5E-9 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13181 Tetratricopeptide repeat 419 449 0.058 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13181 Tetratricopeptide repeat 770 797 2.0E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13181 Tetratricopeptide repeat 734 764 3.0E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13181 Tetratricopeptide repeat 456 485 9.4E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SUPERFAMILY SSF48452 350 523 1.09E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF14559 Tetratricopeptide repeat 362 418 4.7E-6 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Gene3D G3DSA:1.25.40.10 529 647 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00386 711 743 70.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00386 779 811 210.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00386 398 431 26.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00386 364 396 100.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Gene3D G3DSA:1.25.40.10 352 514 1.4E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Gene3D G3DSA:1.25.40.10 648 857 3.3E-56 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Gene3D G3DSA:1.25.40.10 193 259 1.4E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SUPERFAMILY SSF48452 737 855 1.14E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13414 TPR repeat 534 575 5.4E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 799 832 2.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 697 730 1.2E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 384 417 0.034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 629 662 0.48 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 765 798 2.0E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 731 764 6.2E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 453 486 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 418 451 6.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 350 383 0.034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 561 594 0.36 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 527 560 2.3E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 663 696 2.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 209 242 220.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SMART SM00028 595 628 4.6E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF13432 Tetratricopeptide repeat 605 662 3.6E-8 T 23-04-2016 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 Pfam PF00515 Tetratricopeptide repeat 802 830 1.8E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS06895 0f41e8911cf759d08cd301d57e227f8c 897 SUPERFAMILY SSF48452 507 776 3.03E-46 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 Gene3D G3DSA:3.30.1130.10 12 122 3.5E-21 T 23-04-2016 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 PANTHER PTHR34354 9 141 5.7E-19 T 23-04-2016 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 14 121 8.3E-27 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 PANTHER PTHR34354:SF1 9 141 5.7E-19 T 23-04-2016 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 Pfam PF14489 QueF-like protein 46 120 3.1E-17 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS00570 5a040de15a9a7b8cd0701b970b0f01a5 146 SUPERFAMILY SSF55620 6 117 2.59E-14 T 23-04-2016 NIAKO_RS19125 00a6f893f1de5e43c9e8a9fd9ebc4de6 179 Gene3D G3DSA:3.40.50.300 7 173 1.4E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19125 00a6f893f1de5e43c9e8a9fd9ebc4de6 179 SUPERFAMILY SSF52540 4 173 4.33E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19125 00a6f893f1de5e43c9e8a9fd9ebc4de6 179 Pfam PF13521 AAA domain 6 168 4.1E-38 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 SUPERFAMILY SSF53187 32 239 4.79E-82 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 SUPERFAMILY SSF53187 341 432 4.79E-82 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 Pfam PF07687 Peptidase dimerisation domain 226 323 4.1E-12 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 Pfam PF01546 Peptidase family M20/M25/M40 100 427 1.5E-31 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 PANTHER PTHR11014 32 436 1.4E-142 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 Gene3D G3DSA:3.40.630.10 24 220 2.1E-96 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 Gene3D G3DSA:3.40.630.10 341 433 2.1E-96 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 PANTHER PTHR11014:SF63 32 436 1.4E-142 T 23-04-2016 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 PIRSF PIRSF005962 28 435 1.2E-121 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 SUPERFAMILY SSF55031 225 333 1.7E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 44 420 2.0E-106 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS04865 a68392a3a907575c6558ec29826367b9 439 Gene3D G3DSA:3.30.70.360 223 340 9.8E-35 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 SMART SM00342 220 303 4.6E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 Gene3D G3DSA:1.10.10.60 258 305 4.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 SUPERFAMILY SSF46689 258 305 9.32E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 PANTHER PTHR11019 50 306 6.1E-28 T 23-04-2016 NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 Pfam PF12833 Helix-turn-helix domain 226 304 1.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02455 5b3024e66b4a12da107a2b477046ad4a 307 PANTHER PTHR11019:SF50 50 306 6.1E-28 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 560 816 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 127 267 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 885 931 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 467 531 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 333 431 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF56935 965 1015 1.74E-66 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 SUPERFAMILY SSF49464 47 123 7.46E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Gene3D G3DSA:2.60.40.1120 48 137 1.5E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 PANTHER PTHR11532 11 432 1.3E-226 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 PANTHER PTHR11532 568 1046 1.3E-226 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 PANTHER PTHR11532:SF57 11 432 1.3E-226 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 PANTHER PTHR11532:SF57 568 1046 1.3E-226 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 48 1048 7.1E-235 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 220 249 6.3E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Pfam PF13715 CarboxypepD_reg-like domain 48 127 7.2E-9 T 23-04-2016 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Gene3D G3DSA:2.170.130.10 138 253 1.5E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Gene3D G3DSA:2.40.170.20 884 950 2.7E-13 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Gene3D G3DSA:2.40.170.20 341 816 2.7E-13 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12020 8d56b50739b944be9731b91f3778b434 1048 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 243 1.2E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 Gene3D G3DSA:3.20.20.150 9 442 9.4E-200 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 SUPERFAMILY SSF51658 9 442 2.99E-162 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 10 442 5.4E-208 T 23-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 Hamap MF_00455 Xylose isomerase [xylA]. 17 442 51.88 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PANTHER PTHR32176 7 442 2.8E-255 T 23-04-2016 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PANTHER PTHR32176:SF0 7 442 2.8E-255 T 23-04-2016 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 277 304 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 186 207 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 213 232 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 139 159 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 306 317 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 98 120 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 235 259 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 339 350 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS04725 c015242708552e8a83b811adae5ae200 442 PRINTS PR00688 Xylose isomerase signature 162 181 1.3E-80 T 23-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 SUPERFAMILY SSF56024 311 492 1.96E-48 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 SUPERFAMILY SSF143724 118 307 1.0E-37 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Pfam PF02503 Polyphosphate kinase middle domain 121 318 9.8E-41 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 PANTHER PTHR30218:SF0 4 676 2.7E-215 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Pfam PF13089 Polyphosphate kinase N-terminal domain 6 108 5.9E-25 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 PANTHER PTHR30218 4 676 2.7E-215 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Gene3D G3DSA:1.20.58.310 4 80 1.2E-22 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Gene3D G3DSA:1.20.58.310 114 130 1.2E-22 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Gene3D G3DSA:3.30.870.10 496 678 2.5E-62 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 PIRSF PIRSF015589 1 680 1.7E-210 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 SUPERFAMILY SSF140356 4 99 1.83E-19 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 6 670 2.7E-195 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Gene3D G3DSA:3.30.870.10 311 495 5.1E-62 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 SUPERFAMILY SSF56024 496 676 3.36E-58 T 23-04-2016 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Pfam PF13090 Polyphosphate kinase C-terminal domain 327 668 1.7E-134 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS05885 4db5356c50676c92fe51bdedda46976e 680 Gene3D G3DSA:3.30.1840.10 131 297 1.1E-35 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 171 262 2.3E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 394 453 9.0E-7 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 269 367 8.0E-17 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 SUPERFAMILY SSF53738 164 264 2.12E-21 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 SUPERFAMILY SSF53738 8 186 3.88E-35 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 140 6.6E-32 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 6.3E-10 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 6.3E-10 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 6.3E-10 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 SUPERFAMILY SSF53738 266 366 1.33E-17 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 SUPERFAMILY SSF55957 367 458 2.35E-18 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Gene3D G3DSA:3.40.120.10 182 258 1.0E-22 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Gene3D G3DSA:3.30.310.50 347 458 3.8E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 PANTHER PTHR22573:SF48 1 459 3.3E-131 T 23-04-2016 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 4 453 4.0E-153 T 23-04-2016 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 PANTHER PTHR22573 1 459 3.3E-131 T 23-04-2016 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Gene3D G3DSA:3.40.120.10 7 154 1.3E-36 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS21780 a073fd2fbb50f3279c86bce367403bf0 459 Gene3D G3DSA:3.40.120.10 264 346 1.2E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS07865 cab702eafedaf17db1a84f4bf51eab63 308 SUPERFAMILY SSF46955 4 69 5.95E-14 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS07865 cab702eafedaf17db1a84f4bf51eab63 308 SMART SM00422 4 73 0.0025 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07865 cab702eafedaf17db1a84f4bf51eab63 308 Gene3D G3DSA:1.10.1660.10 3 67 2.0E-12 T 23-04-2016 NIAKO_RS07865 cab702eafedaf17db1a84f4bf51eab63 308 Pfam PF13411 MerR HTH family regulatory protein 4 66 1.7E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 Gene3D G3DSA:2.40.170.20 251 805 1.5E-108 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 Gene3D G3DSA:2.60.40.1120 28 110 5.1E-17 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 805 2.7E-79 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 PANTHER PTHR32552:SF10 109 805 4.2E-84 T 23-04-2016 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 PANTHER PTHR32552 109 805 4.2E-84 T 23-04-2016 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 SUPERFAMILY SSF49464 28 118 1.61E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 229 3.0E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 Pfam PF13715 CarboxypepD_reg-like domain 28 114 2.9E-17 T 23-04-2016 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 Gene3D G3DSA:2.170.130.10 111 247 2.0E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13535 4d9e3f8075a07e62bc08b4b61283ee28 805 SUPERFAMILY SSF56935 100 805 6.59E-107 T 23-04-2016 NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 2 128 9.1E-39 T 23-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 PANTHER PTHR21366 1 133 2.1E-26 T 23-04-2016 NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 SUPERFAMILY SSF54593 2 131 4.91E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 114 7.5E-21 T 23-04-2016 NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 Gene3D G3DSA:3.10.180.10 2 128 1.5E-39 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS27760 0045afd99a385c88d38d1ec0103876ba 133 PANTHER PTHR21366:SF0 1 133 2.1E-26 T 23-04-2016 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SUPERFAMILY SSF117074 463 573 2.09E-12 T 23-04-2016 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF00515 Tetratricopeptide repeat 279 310 7.0E-11 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF00515 Tetratricopeptide repeat 246 278 2.8E-9 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SUPERFAMILY SSF48452 276 444 1.06E-39 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SUPERFAMILY SSF48452 50 351 6.07E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF13414 TPR repeat 394 429 1.4E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Gene3D G3DSA:1.25.40.10 46 270 4.4E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 PANTHER PTHR23083:SF416 90 434 1.5E-81 T 23-04-2016 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Gene3D G3DSA:1.25.40.10 271 383 3.9E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF13181 Tetratricopeptide repeat 214 236 0.0086 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF13181 Tetratricopeptide repeat 313 345 0.0013 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 347 380 0.065 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 107 140 23.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 313 346 6.1E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 279 312 2.5E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 245 278 3.0E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 381 414 3.8E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 143 176 0.0032 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 211 244 0.055 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 SMART SM00028 177 210 0.26 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Gene3D G3DSA:1.25.40.10 384 478 1.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Pfam PF13432 Tetratricopeptide repeat 156 205 1.0E-4 T 23-04-2016 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 PANTHER PTHR23083 90 434 1.5E-81 T 23-04-2016 NIAKO_RS26770 745c45b95a869487c4e395fa34660b9e 633 Gene3D G3DSA:2.60.40.10 540 568 3.1E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 PANTHER PTHR30121 15 465 1.9E-140 T 23-04-2016 NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 SUPERFAMILY SSF52540 19 401 1.05E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 Gene3D G3DSA:3.40.50.300 29 131 6.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 Gene3D G3DSA:3.40.50.300 228 396 6.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 Pfam PF05872 Bacterial protein of unknown function (DUF853) 36 504 1.3E-178 T 23-04-2016 IPR033186 Helicase HerA-like C-terminal NIAKO_RS34215 628319f6ffada640fb2e12ebc3649338 520 PANTHER PTHR30121:SF3 15 465 1.9E-140 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF49464 41 122 9.55E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 249 279 3.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 43 1091 1.0E-216 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Gene3D G3DSA:2.170.130.10 123 276 2.4E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Gene3D G3DSA:2.60.40.1120 43 103 3.8E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Pfam PF13715 CarboxypepD_reg-like domain 43 125 3.7E-11 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532 595 1089 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532 477 563 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532 211 428 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532 14 192 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Gene3D G3DSA:2.40.170.20 362 683 1.0E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Gene3D G3DSA:2.40.170.20 902 944 1.0E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Gene3D G3DSA:2.40.170.20 726 825 1.0E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 273 2.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF56935 904 948 1.14E-76 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF56935 467 825 1.14E-76 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF56935 123 297 1.14E-76 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF56935 352 440 1.14E-76 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 SUPERFAMILY SSF56935 1003 1053 1.14E-76 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532:SF57 595 1089 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532:SF57 477 563 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532:SF57 211 428 4.5E-198 T 23-04-2016 NIAKO_RS08610 af2a1b9d897c112537b5814a37575bd0 1091 PANTHER PTHR11532:SF57 14 192 4.5E-198 T 23-04-2016 NIAKO_RS26650 69b6aed6ad0c6b79259c38ec538ff5ff 384 Pfam PF05168 HEPN domain 267 363 9.8E-13 T 23-04-2016 IPR007842 HEPN domain NIAKO_RS26650 69b6aed6ad0c6b79259c38ec538ff5ff 384 SMART SM00748 248 361 0.0018 T 23-04-2016 IPR007842 HEPN domain NIAKO_RS26650 69b6aed6ad0c6b79259c38ec538ff5ff 384 SUPERFAMILY SSF81593 254 357 2.39E-11 T 23-04-2016 NIAKO_RS26650 69b6aed6ad0c6b79259c38ec538ff5ff 384 Gene3D G3DSA:1.20.120.330 251 366 6.1E-12 T 23-04-2016 NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 SUPERFAMILY SSF56784 7 165 3.1E-37 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 Pfam PF08282 haloacid dehalogenase-like hydrolase 78 142 3.7E-7 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 PIRSF PIRSF006118 1 172 1.1E-55 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 PANTHER PTHR21485 1 165 4.7E-39 T 23-04-2016 NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 13 162 1.5E-40 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 PANTHER PTHR21485:SF3 1 165 4.7E-39 T 23-04-2016 NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 12 124 1.4E-12 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NIAKO_RS07995 3daeece560536fce51cc766af1d1d73f 173 Gene3D G3DSA:3.40.50.1000 2 163 3.3E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 PANTHER PTHR11532:SF57 666 809 9.5E-36 T 23-04-2016 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Gene3D G3DSA:2.170.130.10 694 791 1.1E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 SUPERFAMILY SSF49464 543 603 9.81E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 SMART SM01360 845 935 1.5E-9 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Gene3D G3DSA:2.60.40.690 1393 1493 6.8E-6 T 23-04-2016 IPR009048 Alpha-macroglobulin, receptor-binding GO:0005576 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Pfam PF07715 TonB-dependent Receptor Plug Domain 684 784 2.4E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Pfam PF00207 Alpha-2-macroglobulin family 845 935 6.1E-10 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 PANTHER PTHR11532 666 809 9.5E-36 T 23-04-2016 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Gene3D G3DSA:1.50.10.20 1040 1317 6.4E-42 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 SUPERFAMILY SSF48239 1039 1316 1.36E-37 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1041 1070 6.3E-11 T 23-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Pfam PF07678 A-macroglobulin complement component 1090 1313 4.6E-14 T 23-04-2016 IPR011626 Alpha-macroglobulin complement component GO:0005615 NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 Gene3D G3DSA:2.60.40.1120 543 613 8.1E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS05485 f469974cb1193c3bd39201eae445f060 1508 SUPERFAMILY SSF56935 664 875 1.65E-21 T 23-04-2016 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 Pfam PF00202 Aminotransferase class-III 20 404 1.1E-117 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 Gene3D G3DSA:3.90.1150.10 8 63 4.7E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 Gene3D G3DSA:3.90.1150.10 314 406 4.7E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 10 405 1.8E-197 T 23-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 Gene3D G3DSA:3.40.640.10 64 312 2.6E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 PANTHER PTHR11986 3 408 4.3E-260 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 229 266 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 PANTHER PTHR11986:SF18 3 408 4.3E-260 T 23-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS20350 8ac12a1e59606934d7d74882fe078069 408 SUPERFAMILY SSF53383 8 406 4.08E-123 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS33090 b62a0d4fa92487ffcd2b0250ab29c99f 203 Gene3D G3DSA:3.90.1140.10 14 130 4.4E-7 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS33090 b62a0d4fa92487ffcd2b0250ab29c99f 203 Pfam PF13563 2'-5' RNA ligase superfamily 22 175 8.3E-8 T 23-04-2016 NIAKO_RS33090 b62a0d4fa92487ffcd2b0250ab29c99f 203 SUPERFAMILY SSF55144 16 189 1.15E-9 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 SMART SM00382 369 558 4.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 Pfam PF00664 ABC transporter transmembrane region 32 298 4.4E-52 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 Gene3D G3DSA:3.40.50.300 341 569 7.5E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 SUPERFAMILY SSF52540 342 567 1.52E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 Pfam PF00005 ABC transporter 360 512 2.2E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 Gene3D G3DSA:1.20.1560.10 17 326 1.1E-72 T 23-04-2016 NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 PANTHER PTHR24221 12 566 3.2E-161 T 23-04-2016 NIAKO_RS06520 dfec902bf0dfee23452dadc66f5df93b 579 SUPERFAMILY SSF90123 17 330 1.57E-72 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PANTHER PTHR10169 5 397 1.4E-261 T 23-04-2016 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PANTHER PTHR10169 413 629 1.4E-261 T 23-04-2016 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PANTHER PTHR10169:SF28 5 397 1.4E-261 T 23-04-2016 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PANTHER PTHR10169:SF28 413 629 1.4E-261 T 23-04-2016 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 SUPERFAMILY SSF55874 12 210 1.75E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 SMART SM00387 42 177 1.2E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Pfam PF01751 Toprim domain 422 528 7.9E-13 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Gene3D G3DSA:3.40.50.670 379 556 7.6E-58 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 616 1.1E-7 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 SMART SM00433 46 621 1.3E-142 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Pfam PF00204 DNA gyrase B 240 372 2.6E-29 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 SUPERFAMILY SSF54211 228 376 6.64E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 SUPERFAMILY SSF56719 413 619 2.14E-57 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Gene3D G3DSA:3.30.565.10 12 213 5.8E-53 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Gene3D G3DSA:3.30.230.10 215 378 6.4E-44 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 562 578 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 258 271 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 422 436 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 115 129 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 80 93 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 46 61 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 522 534 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 484 500 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 PRINTS PR00418 DNA topoisomerase II family signature 502 519 7.2E-49 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04325 accdb4381a1bb5e8e81c79958d5218a1 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 45 175 1.1E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33560 6551cdd105417a83539fa4328ef9898f 172 SMART SM00867 5 170 1.5E-21 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS33560 6551cdd105417a83539fa4328ef9898f 172 SUPERFAMILY SSF101874 5 170 6.93E-32 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS33560 6551cdd105417a83539fa4328ef9898f 172 Gene3D G3DSA:2.40.128.110 5 171 7.6E-35 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS33560 6551cdd105417a83539fa4328ef9898f 172 Pfam PF04264 YceI-like domain 7 169 5.8E-27 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 SUPERFAMILY SSF51569 9 300 1.36E-42 T 23-04-2016 NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 PANTHER PTHR12128 8 318 1.1E-19 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 Gene3D G3DSA:3.20.20.70 8 302 2.8E-41 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 Pfam PF00701 Dihydrodipicolinate synthetase family 11 251 4.9E-19 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 SMART SM01130 8 304 1.6E-19 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02765 c6906f8ecdbf8a084cfa69b39a36f503 320 PIRSF PIRSF001365 5 314 2.8E-40 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 Gene3D G3DSA:1.10.10.60 188 232 1.2E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 Pfam PF12833 Helix-turn-helix domain 202 279 2.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 PANTHER PTHR11019 40 275 2.8E-27 T 23-04-2016 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 SUPERFAMILY SSF46689 231 280 4.93E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 SMART SM00342 196 280 2.6E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 Gene3D G3DSA:2.60.120.280 13 165 1.3E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 SUPERFAMILY SSF51215 35 146 4.58E-7 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 PANTHER PTHR11019:SF45 40 275 2.8E-27 T 23-04-2016 NIAKO_RS20985 fdf13f43009664a51966ff0190488a8a 284 Gene3D G3DSA:1.10.10.60 233 281 1.7E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 Gene3D G3DSA:1.20.1600.10 342 480 1.8E-71 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 Gene3D G3DSA:1.20.1600.10 19 296 1.8E-71 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 Pfam PF02321 Outer membrane efflux protein 246 467 1.1E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 Pfam PF02321 Outer membrane efflux protein 27 218 1.5E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 SUPERFAMILY SSF56954 1 296 1.48E-73 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 SUPERFAMILY SSF56954 351 480 1.48E-73 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 PANTHER PTHR30026:SF4 1 304 8.1E-46 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 PANTHER PTHR30026:SF4 347 479 8.1E-46 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 PANTHER PTHR30026 1 304 8.1E-46 T 23-04-2016 NIAKO_RS33705 62d57c1bc974cc7da54374f285d5f031 483 PANTHER PTHR30026 347 479 8.1E-46 T 23-04-2016 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 289 4.0E-104 T 23-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 PIRSF PIRSF000103 1 291 9.9E-79 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 PANTHER PTHR22981 1 291 9.8E-103 T 23-04-2016 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 PANTHER PTHR22981:SF70 1 291 9.8E-103 T 23-04-2016 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 6.5E-49 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 Gene3D G3DSA:3.40.50.720 1 163 8.9E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 281 1.8E-35 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 Gene3D G3DSA:1.10.1040.10 164 289 2.8E-40 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 SUPERFAMILY SSF51735 3 162 6.51E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 NIAKO_RS13230 ddcdd4d1fb2842f88f591cdfb1aceeae 291 SUPERFAMILY SSF48179 162 289 1.25E-37 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS11500 f34f727ab7cfb9c474d9e5ec72d657e1 1122 SUPERFAMILY SSF53756 36 275 3.45E-6 T 23-04-2016 NIAKO_RS11500 f34f727ab7cfb9c474d9e5ec72d657e1 1122 SUPERFAMILY SSF53756 758 1021 1.0E-5 T 23-04-2016 NIAKO_RS11500 f34f727ab7cfb9c474d9e5ec72d657e1 1122 SUPERFAMILY SSF53756 381 641 6.91E-10 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 1.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 690 1.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 676 1.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 1.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 735 3.4E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SUPERFAMILY SSF55874 559 735 3.54E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF01590 GAF domain 340 483 1.0E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SUPERFAMILY SSF52172 755 878 3.42E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Gene3D G3DSA:3.40.50.2300 898 1016 3.8E-42 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Gene3D G3DSA:3.30.450.40 315 497 8.4E-17 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423:SF382 3 10 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423:SF382 484 740 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423:SF382 884 1015 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Gene3D G3DSA:3.40.50.2300 754 878 9.8E-29 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF00072 Response regulator receiver domain 900 1012 1.7E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF00072 Response regulator receiver domain 755 871 3.3E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423 3 10 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423 484 740 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 PANTHER PTHR24423 884 1015 1.4E-155 T 23-04-2016 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Gene3D G3DSA:1.10.287.130 498 555 1.0E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SUPERFAMILY SSF47384 488 571 2.16E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF00512 His Kinase A (phospho-acceptor) domain 505 570 3.4E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SMART SM00387 617 737 2.4E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SMART SM00388 505 570 2.6E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SUPERFAMILY SSF52172 899 1016 3.84E-40 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Pfam PF00672 HAMP domain 198 265 1.0E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SUPERFAMILY SSF55781 321 491 3.49E-16 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SMART SM00448 753 872 2.7E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SMART SM00448 898 1012 9.0E-43 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 Gene3D G3DSA:3.30.565.10 556 735 1.1E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36920 c0cd8762bb4296bd6a710f89a22a1e58 1019 SMART SM00065 339 493 0.0014 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS14195 0013d82b43241ba8dee6faaa88ba468b 237 Pfam PF12866 Protein of unknown function (DUF3823) 14 233 8.4E-52 T 23-04-2016 IPR024278 Protein of unknown function DUF3823 NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 Pfam PF08534 Redoxin 314 440 3.8E-20 T 23-04-2016 IPR013740 Redoxin GO:0016491 NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 SUPERFAMILY SSF52833 304 448 7.58E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 Pfam PF14289 Domain of unknown function (DUF4369) 17 117 1.6E-11 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 PANTHER PTHR13871 322 438 1.0E-20 T 23-04-2016 NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 Gene3D G3DSA:3.40.30.10 311 454 3.2E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36620 e33e1279dceb4d80a0c8976e9141e31b 456 ProSitePatterns PS00194 Thioredoxin family active site. 342 360 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS19155 52c7abbf94955ace2a73cf30d3552291 280 PANTHER PTHR11732 8 267 6.6E-46 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS19155 52c7abbf94955ace2a73cf30d3552291 280 Pfam PF00248 Aldo/keto reductase family 23 268 7.5E-30 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS19155 52c7abbf94955ace2a73cf30d3552291 280 SUPERFAMILY SSF51430 8 268 7.86E-53 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS19155 52c7abbf94955ace2a73cf30d3552291 280 Gene3D G3DSA:3.20.20.100 8 268 5.6E-43 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Pfam PF16657 Maltogenic Amylase, C-terminal domain 469 547 2.8E-23 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 PANTHER PTHR10357:SF164 14 406 3.7E-260 T 23-04-2016 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 PANTHER PTHR10357:SF164 445 578 3.7E-260 T 23-04-2016 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Pfam PF00128 Alpha amylase, catalytic domain 37 390 9.1E-77 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Gene3D G3DSA:3.90.400.10 114 182 2.6E-24 T 23-04-2016 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Gene3D G3DSA:2.60.40.1180 469 550 1.3E-16 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 SMART SM00642 22 416 6.0E-98 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 SUPERFAMILY SSF51011 469 551 6.24E-16 T 23-04-2016 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Gene3D G3DSA:3.20.20.80 190 415 4.1E-104 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Gene3D G3DSA:3.20.20.80 448 461 4.1E-104 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 Gene3D G3DSA:3.20.20.80 16 113 4.1E-104 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 PANTHER PTHR10357 14 406 3.7E-260 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 PANTHER PTHR10357 445 578 3.7E-260 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 SUPERFAMILY SSF51445 12 332 1.74E-127 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 SUPERFAMILY SSF51445 359 466 1.74E-127 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03425 6146023f9c8f8aeeeb6de9bb1895a23f 1104 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 13 550 1.2E-270 T 23-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 Gene3D G3DSA:3.40.50.300 338 575 1.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 SMART SM00382 361 561 3.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 Pfam PF00664 ABC transporter transmembrane region 27 293 6.5E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 SUPERFAMILY SSF52540 329 570 2.66E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 Gene3D G3DSA:1.20.1560.10 14 320 6.1E-56 T 23-04-2016 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 PANTHER PTHR24221 17 579 6.8E-135 T 23-04-2016 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 Pfam PF00005 ABC transporter 352 500 3.2E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 PANTHER PTHR24221:SF138 17 579 6.8E-135 T 23-04-2016 NIAKO_RS06515 d5ca79dc586c5d1917c99883cb3e21e3 580 SUPERFAMILY SSF90123 9 321 3.92E-62 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 349 512 3.4E-7 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 SUPERFAMILY SSF49303 241 338 3.27E-17 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Gene3D G3DSA:3.20.20.80 338 568 1.4E-36 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Gene3D G3DSA:3.20.20.80 607 675 1.4E-36 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 SUPERFAMILY SSF49303 672 773 1.58E-16 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 PANTHER PTHR10066:SF56 1 852 1.2E-199 T 23-04-2016 IPR028787 Mannosylglycoprotein endo-beta-mannosidase GO:0033947 KEGG: 00040+3.2.1.15|KEGG: 00500+3.2.1.15|MetaCyc: PWY-1081 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 PANTHER PTHR10066 1 852 1.2E-199 T 23-04-2016 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Gene3D G3DSA:2.60.120.260 16 207 4.9E-33 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Gene3D G3DSA:2.60.40.320 208 337 1.6E-14 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 SUPERFAMILY SSF49785 20 220 5.67E-37 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 SUPERFAMILY SSF51445 336 668 1.2E-61 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 Pfam PF00703 Glycosyl hydrolases family 2 245 338 1.3E-9 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS35805 281aed29da3cf260ec8a15e8d7481dfc 871 SUPERFAMILY SSF49303 758 869 5.47E-26 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82693 132 178 5.49E-16 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82693 264 317 5.49E-16 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:1.10.3850.10 789 1004 2.8E-40 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:3.30.70.1430 38 127 2.5E-15 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82714 698 783 2.22E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82693 38 122 2.04E-12 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Pfam PF00873 AcrB/AcrD/AcrF family 3 997 8.6E-201 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82866 287 488 1.7E-37 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:3.30.2090.10 179 260 6.7E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:3.30.2090.10 698 783 1.8E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 PANTHER PTHR32063 3 997 1.4E-234 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:3.30.70.1430 548 630 5.3E-10 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 Gene3D G3DSA:1.20.1640.10 281 495 2.8E-48 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82693 546 630 3.71E-10 T 23-04-2016 NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82714 180 261 2.75E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20765 6bcdcd8d3f63401404e672b929a98da4 1010 SUPERFAMILY SSF82866 785 1005 1.16E-36 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115 313 708 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115 1 187 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115 265 293 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Gene3D G3DSA:2.40.30.10 314 415 4.5E-36 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SUPERFAMILY SSF52540 4 292 1.66E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SUPERFAMILY SSF54980 617 707 1.2E-30 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Pfam PF03764 Elongation factor G, domain IV 489 615 1.2E-37 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SMART SM00838 617 704 2.8E-55 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Pfam PF00679 Elongation factor G C-terminus 617 703 4.1E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Gene3D G3DSA:3.30.70.870 416 490 7.9E-36 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 190 2.1E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SUPERFAMILY SSF54980 414 491 3.96E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 709 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SMART SM00889 490 615 1.6E-52 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Pfam PF14492 Elongation Factor G, domain II 414 486 5.0E-33 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Hamap MF_00054_B Elongation factor G [fusA]. 3 708 104.626 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Pfam PF03144 Elongation factor Tu domain 2 334 401 8.9E-13 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PRINTS PR00315 GTP-binding elongation factor signature 140 149 2.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PRINTS PR00315 GTP-binding elongation factor signature 88 98 2.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SUPERFAMILY SSF50447 275 411 1.26E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Gene3D G3DSA:3.30.70.240 616 702 2.5E-34 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115:SF66 313 708 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115:SF66 1 187 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 PANTHER PTHR23115:SF66 265 293 0.0 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Gene3D G3DSA:3.40.50.300 3 296 1.1E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Pfam PF00009 Elongation factor Tu GTP binding domain 8 292 1.7E-65 T 23-04-2016 NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 Gene3D G3DSA:3.30.230.10 494 615 4.2E-38 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS23040 f7ed64ddd16078b18fecf5c7c47f21a3 716 SUPERFAMILY SSF54211 489 616 1.29E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 PANTHER PTHR31964 1 156 4.4E-20 T 23-04-2016 NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 Gene3D G3DSA:3.40.50.620 1 140 4.3E-28 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 SUPERFAMILY SSF52402 146 270 3.68E-12 T 23-04-2016 NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 PANTHER PTHR31964:SF26 1 156 4.4E-20 T 23-04-2016 NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 PRINTS PR01438 Universal stress protein signature 99 111 5.62E-12 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 PRINTS PR01438 Universal stress protein signature 1 18 5.62E-12 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 PRINTS PR01438 Universal stress protein signature 116 138 5.62E-12 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 SUPERFAMILY SSF52402 1 149 3.52E-29 T 23-04-2016 NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 Gene3D G3DSA:3.40.50.620 145 271 7.5E-9 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS27600 ae463218e61104fe90d7627939f14ffb 273 Pfam PF00582 Universal stress protein family 2 138 5.9E-22 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 Pfam PF02132 RecR protein 41 78 3.9E-12 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 Gene3D G3DSA:1.10.150.20 9 33 1.3E-4 T 23-04-2016 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 SUPERFAMILY SSF111304 5 199 1.2E-66 T 23-04-2016 IPR023627 Recombination protein RecR NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 86.224 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 PANTHER PTHR30446 2 201 4.1E-99 T 23-04-2016 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 TIGRFAM TIGR00615 recR: recombination protein RecR 6 196 4.7E-70 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 PANTHER PTHR30446:SF0 2 201 4.1E-99 T 23-04-2016 NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 SMART SM00493 81 166 1.9E-6 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS29630 ab2cccc621e5f77630d06288edec686b 205 Pfam PF13662 Toprim domain 83 172 9.1E-21 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 Gene3D G3DSA:3.40.50.300 3 188 1.2E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 Hamap MF_00235 Adenylate kinase [adk]. 2 188 30.174 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PANTHER PTHR23359 3 188 6.8E-40 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 SUPERFAMILY SSF52540 3 188 2.71E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PRINTS PR00094 Adenylate kinase signature 5 18 1.2E-16 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PRINTS PR00094 Adenylate kinase signature 152 166 1.2E-16 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PRINTS PR00094 Adenylate kinase signature 135 150 1.2E-16 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PRINTS PR00094 Adenylate kinase signature 82 98 1.2E-16 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 PRINTS PR00094 Adenylate kinase signature 33 47 1.2E-16 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 Pfam PF00406 Adenylate kinase 6 163 2.3E-37 T 23-04-2016 NIAKO_RS05305 a4912687161b5f16a2f684175e9ca375 191 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SUPERFAMILY SSF48230 207 532 2.56E-44 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF16351 Domain of unknown function (DUF4979) 576 729 3.9E-55 T 23-04-2016 IPR032502 Protein of unknown function DUF4979 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF16351 Domain of unknown function (DUF4979) 24 185 2.4E-56 T 23-04-2016 IPR032502 Protein of unknown function DUF4979 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF16351 Domain of unknown function (DUF4979) 827 980 1.9E-54 T 23-04-2016 IPR032502 Protein of unknown function DUF4979 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:2.60.40.1080 1001 1056 1.0E-7 T 23-04-2016 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:2.60.40.1080 1102 1137 4.7E-6 T 23-04-2016 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:2.60.40.1080 747 803 2.9E-4 T 23-04-2016 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1488 1560 2.0E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SMART SM01067 1314 1396 2.1E-8 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SMART SM01067 1159 1242 1.0E-8 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF05426 Alginate lyase 265 472 5.3E-18 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:1.50.10.110 245 527 1.2E-41 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:2.60.40.710 1313 1459 1.6E-36 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Gene3D G3DSA:2.60.40.710 1158 1305 1.1E-35 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SUPERFAMILY SSF49384 1159 1305 2.67E-34 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SUPERFAMILY SSF49373 999 1058 6.12E-6 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 SUPERFAMILY SSF49384 1313 1459 1.1E-34 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF00942 Cellulose binding domain 1162 1240 8.2E-16 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS36830 a3e191e45d1f0fcfce93e9e6a98b5605 1560 Pfam PF00942 Cellulose binding domain 1314 1395 1.1E-17 T 23-04-2016 IPR001956 Bacterial type 3a cellulose-binding domain GO:0005975|GO:0030248 NIAKO_RS20205 070d4a02c956748a394a1a62a4ac3870 461 Pfam PF07980 SusD family 341 459 9.7E-11 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20205 070d4a02c956748a394a1a62a4ac3870 461 SUPERFAMILY SSF48452 18 459 8.6E-57 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20205 070d4a02c956748a394a1a62a4ac3870 461 Gene3D G3DSA:1.25.40.10 208 401 2.1E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20205 070d4a02c956748a394a1a62a4ac3870 461 Pfam PF14322 Starch-binding associating with outer membrane 22 225 9.0E-31 T 23-04-2016 NIAKO_RS02705 243fe878feca641ddd5db6a2cbd2ef5f 198 PANTHER PTHR19136 3 196 5.1E-40 T 23-04-2016 NIAKO_RS02705 243fe878feca641ddd5db6a2cbd2ef5f 198 Pfam PF12804 MobA-like NTP transferase domain 7 167 3.5E-42 T 23-04-2016 IPR025877 MobA-like NTP transferase NIAKO_RS02705 243fe878feca641ddd5db6a2cbd2ef5f 198 PANTHER PTHR19136:SF78 3 196 5.1E-40 T 23-04-2016 NIAKO_RS02705 243fe878feca641ddd5db6a2cbd2ef5f 198 Gene3D G3DSA:3.90.550.10 5 193 5.1E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS02705 243fe878feca641ddd5db6a2cbd2ef5f 198 SUPERFAMILY SSF53448 5 189 1.49E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 Pfam PF00072 Response regulator receiver domain 6 119 5.1E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 PANTHER PTHR26402:SF588 4 208 4.3E-56 T 23-04-2016 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 SMART SM00448 4 118 1.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 SMART SM00421 154 211 4.1E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 Gene3D G3DSA:1.10.10.10 122 209 3.8E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 Gene3D G3DSA:3.40.50.2300 3 121 3.4E-28 T 23-04-2016 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 SUPERFAMILY SSF52172 3 178 2.11E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 5.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 5.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 5.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 4.7E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS26865 251719b991b4ac4361b54c315abf863d 214 PANTHER PTHR26402 4 208 4.3E-56 T 23-04-2016 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Gene3D G3DSA:1.50.10.10 204 407 1.2E-15 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 SUPERFAMILY SSF52833 5 133 1.59E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 433 525 0.012 T 23-04-2016 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 233 328 0.31 T 23-04-2016 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Pfam PF03190 Protein of unknown function, DUF255 5 165 6.7E-77 T 23-04-2016 IPR004879 Domain of unknown function DUF255 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 SUPERFAMILY SSF48208 188 552 3.66E-74 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Gene3D G3DSA:3.40.30.10 23 130 7.9E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 PANTHER PTHR12145 5 684 5.7E-262 T 23-04-2016 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 PANTHER PTHR12145:SF11 5 684 5.7E-262 T 23-04-2016 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 PIRSF PIRSF006402 1 685 2.8E-231 T 23-04-2016 IPR024705 Spermatogenesis-associated protein 20 NIAKO_RS33740 44877c134a58c9c0254a16c50ccf2185 685 Gene3D G3DSA:1.50.10.10 408 537 3.6E-10 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS26000 96f01fc3ba0ccaf3c1034119a8fb77f3 91 Pfam PF12674 Putative zinc ribbon domain 7 84 4.7E-21 T 23-04-2016 IPR025868 Putative zinc ribbon domain NIAKO_RS19410 2537579f1644c548811918f9b7009f0c 241 PANTHER PTHR12598:SF0 1 239 1.5E-86 T 23-04-2016 NIAKO_RS19410 2537579f1644c548811918f9b7009f0c 241 Gene3D G3DSA:3.20.20.380 1 238 4.0E-81 T 23-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 NIAKO_RS19410 2537579f1644c548811918f9b7009f0c 241 SUPERFAMILY SSF110395 1 237 4.84E-67 T 23-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 NIAKO_RS19410 2537579f1644c548811918f9b7009f0c 241 PANTHER PTHR12598 1 239 1.5E-86 T 23-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 NIAKO_RS19410 2537579f1644c548811918f9b7009f0c 241 Pfam PF03932 CutC family 1 201 4.8E-75 T 23-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 290 513 2.4E-27 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Gene3D G3DSA:3.20.20.80 288 591 2.8E-80 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Gene3D G3DSA:2.60.40.1560 618 698 2.8E-20 T 23-04-2016 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Pfam PF00703 Glycosyl hydrolases family 2 173 283 2.6E-15 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Pfam PF16355 Domain of unknown function (DUF4982) 623 683 1.1E-19 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Gene3D G3DSA:2.60.120.260 18 160 6.6E-46 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PANTHER PTHR10066:SF46 13 435 2.3E-167 T 23-04-2016 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PANTHER PTHR10066:SF46 469 669 2.3E-167 T 23-04-2016 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 SUPERFAMILY SSF51445 455 591 3.74E-71 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 SUPERFAMILY SSF51445 288 426 3.74E-71 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 22 169 4.8E-32 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 408 422 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 Gene3D G3DSA:2.60.40.320 161 284 5.7E-28 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 SUPERFAMILY SSF49303 177 283 1.47E-15 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 295 309 2.0E-12 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 102 117 2.0E-12 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 408 423 2.0E-12 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 326 344 2.0E-12 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PANTHER PTHR10066 13 435 2.3E-167 T 23-04-2016 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 PANTHER PTHR10066 469 669 2.3E-167 T 23-04-2016 NIAKO_RS13805 45efd796fda83e441930ab0b5dd102ae 804 SUPERFAMILY SSF49785 12 170 4.01E-47 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS09920 5d064743884f8f2de158ff67643d9fda 322 PANTHER PTHR40590 40 320 5.2E-20 T 23-04-2016 NIAKO_RS09920 5d064743884f8f2de158ff67643d9fda 322 Pfam PF01963 TraB family 40 309 1.3E-66 T 23-04-2016 IPR002816 Pheromone shutdown, TraB NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.30.930.10 510 703 1.0E-42 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SUPERFAMILY SSF54991 711 809 2.75E-24 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.30.56.20 417 491 1.7E-14 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.30.56.10 163 191 4.4E-21 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.30.56.10 1 38 4.4E-21 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Pfam PF03483 B3/4 domain 227 401 9.6E-62 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SMART SM00896 716 809 4.5E-30 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.30.70.380 721 809 1.0E-26 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 PANTHER PTHR10947 2 809 1.8E-228 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 PANTHER PTHR10947:SF0 2 809 1.8E-228 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SUPERFAMILY SSF50249 43 192 5.88E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 809 4.9E-240 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SUPERFAMILY SSF46955 419 491 3.11E-10 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SUPERFAMILY SSF56037 216 412 1.86E-65 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SMART SM00873 227 401 8.7E-81 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:3.50.40.10 214 411 2.1E-77 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Pfam PF03147 Ferredoxin-fold anticodon binding domain 720 809 1.8E-24 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Pfam PF03484 tRNA synthetase B5 domain 421 486 5.1E-10 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SMART SM00874 418 487 1.2E-9 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 803 38.624 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Gene3D G3DSA:2.40.50.140 45 159 2.3E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 SUPERFAMILY SSF55681 485 702 1.29E-27 T 23-04-2016 NIAKO_RS27525 5f753dd4eb01d546a09e3dce6c3040d5 810 Pfam PF01588 Putative tRNA binding domain 48 152 3.5E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 Gene3D G3DSA:1.10.287.130 115 174 3.0E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 345 1.2E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 301 1.1E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 1.1E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 1.1E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 1.1E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 SMART SM00388 121 188 2.4E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 188 1.7E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 PANTHER PTHR24423 56 344 6.0E-72 T 23-04-2016 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 SUPERFAMILY SSF47384 112 188 1.67E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 Gene3D G3DSA:3.30.565.10 175 345 2.3E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 SUPERFAMILY SSF55874 177 344 5.63E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33960 4acd62936814d9a0be4ec766e5381ecf 349 SMART SM00387 235 348 2.5E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 PANTHER PTHR23508:SF7 12 338 4.3E-191 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 PANTHER PTHR23508:SF7 414 515 4.3E-191 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 SUPERFAMILY SSF103473 2 340 1.22E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 SUPERFAMILY SSF103473 418 506 1.22E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 Pfam PF00083 Sugar (and other) transporter 17 224 7.3E-29 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 Gene3D G3DSA:1.20.1250.20 12 224 3.8E-26 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 Gene3D G3DSA:1.20.1250.20 248 335 1.5E-16 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 Gene3D G3DSA:1.20.1250.20 414 505 1.5E-16 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 PANTHER PTHR23508 12 338 4.3E-191 T 23-04-2016 NIAKO_RS32770 a7d201fa67968143b425e25a9ca2887f 516 PANTHER PTHR23508 414 515 4.3E-191 T 23-04-2016 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 PANTHER PTHR30173 1 196 6.1E-40 T 23-04-2016 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 SUPERFAMILY SSF88659 114 180 1.92E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 180 1.2E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 Gene3D G3DSA:1.10.1740.10 8 116 5.7E-22 T 23-04-2016 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 Pfam PF04542 Sigma-70 region 2 27 92 6.4E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 180 4.4E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS35150 875020359c961e839a71f218a407221f 197 Gene3D G3DSA:1.10.10.10 121 181 9.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35150 875020359c961e839a71f218a407221f 197 SUPERFAMILY SSF88946 8 112 3.37E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 PANTHER PTHR30173:SF20 1 196 6.1E-40 T 23-04-2016 NIAKO_RS35150 875020359c961e839a71f218a407221f 197 Pfam PF08281 Sigma-70, region 4 127 175 4.4E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 111 278 1.1E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13174 Tetratricopeptide repeat 952 979 0.048 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13174 Tetratricopeptide repeat 510 537 0.13 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13174 Tetratricopeptide repeat 548 575 0.092 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13174 Tetratricopeptide repeat 656 687 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 473 576 8.18E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 727 821 2.0E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 894 977 6.0E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 822 893 1.0E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 548 707 7.85E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 728 858 7.21E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 523 576 3.7E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13432 Tetratricopeptide repeat 731 787 1.5E-7 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13432 Tetratricopeptide repeat 150 204 2.1E-4 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF13432 Tetratricopeptide repeat 881 939 1.0E-7 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 262 344 1.7E-7 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 402 522 1.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 611 708 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 267 389 2.2E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 361 431 1.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 473 497 1.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 876 977 1.56E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SUPERFAMILY SSF48452 254 353 2.43E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 250 283 170.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 912 945 17.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 654 687 0.016 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 876 909 9.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 320 353 300.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 285 318 360.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 508 540 1.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 950 983 43.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 547 580 300.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 764 797 33.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 SMART SM00028 144 176 72.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 255 318 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 465 577 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 612 687 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 140 217 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 727 796 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 81 102 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 PANTHER PTHR23083 875 978 9.1E-30 T 23-04-2016 NIAKO_RS21630 3f08187be6a5cdee6c1e8cd7587867da 1008 Gene3D G3DSA:1.25.40.10 27 266 2.1E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 Pfam PF04397 LytTr DNA-binding domain 144 233 5.5E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 PANTHER PTHR26402:SF522 2 113 2.2E-25 T 23-04-2016 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 Gene3D G3DSA:3.40.50.2300 1 120 2.8E-23 T 23-04-2016 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 PANTHER PTHR26402 2 113 2.2E-25 T 23-04-2016 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 Pfam PF00072 Response regulator receiver domain 5 110 3.7E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 Gene3D G3DSA:2.40.50.40 136 203 4.5E-23 T 23-04-2016 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 SMART SM00448 2 110 1.1E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 SMART SM00850 143 234 5.4E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS15205 8f17f4b12c6dd9e7bfd510bc7eb3f680 238 SUPERFAMILY SSF52172 1 125 3.7E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05190 1a5e351a4417f095d79f155187da820f 181 SUPERFAMILY SSF88874 1 175 2.62E-36 T 23-04-2016 NIAKO_RS05190 1a5e351a4417f095d79f155187da820f 181 PANTHER PTHR34720 1 181 9.3E-35 T 23-04-2016 NIAKO_RS05190 1a5e351a4417f095d79f155187da820f 181 Pfam PF07484 Phage Tail Collar Domain 7 62 1.4E-24 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS05190 1a5e351a4417f095d79f155187da820f 181 Gene3D G3DSA:3.90.1340.10 1 67 2.4E-28 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Pfam PF07715 TonB-dependent Receptor Plug Domain 221 299 2.6E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 PANTHER PTHR30069:SF1 104 731 1.1E-71 T 23-04-2016 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Pfam PF13715 CarboxypepD_reg-like domain 105 188 3.1E-12 T 23-04-2016 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Gene3D G3DSA:2.40.170.20 308 763 1.0E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Gene3D G3DSA:2.40.170.20 795 843 1.0E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Pfam PF00593 TonB dependent receptor 580 873 5.5E-13 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 SUPERFAMILY SSF49464 104 186 3.01E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Gene3D G3DSA:2.60.40.1120 104 177 4.6E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 PANTHER PTHR30069 104 731 1.1E-71 T 23-04-2016 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 Gene3D G3DSA:2.170.130.10 178 307 1.4E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08800 5ef72b22adf3972171c5f71f3c083ef7 876 SUPERFAMILY SSF56935 183 876 8.42E-78 T 23-04-2016 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 Gene3D G3DSA:1.10.1740.10 27 139 1.7E-26 T 23-04-2016 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 PANTHER PTHR30173 17 206 8.3E-35 T 23-04-2016 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 Pfam PF08281 Sigma-70, region 4 147 191 7.3E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 Gene3D G3DSA:1.10.10.10 144 201 1.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 Pfam PF04542 Sigma-70 region 2 46 113 3.5E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 SUPERFAMILY SSF88659 144 201 1.02E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 SUPERFAMILY SSF88946 27 128 4.32E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12485 0f8c1709ae498a2398900041a4e813ca 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 198 5.3E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 176 7.8E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 Pfam PF04542 Sigma-70 region 2 27 91 5.5E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 PANTHER PTHR30173 1 195 4.1E-37 T 23-04-2016 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 Gene3D G3DSA:1.10.10.10 124 181 9.6E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 SUPERFAMILY SSF88659 120 181 2.62E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 SUPERFAMILY SSF88946 1 99 4.97E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 Gene3D G3DSA:1.10.1740.10 5 104 3.6E-22 T 23-04-2016 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 Pfam PF08281 Sigma-70, region 4 124 172 3.4E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11945 8f82e2afbc4494f7063100604912af60 195 PANTHER PTHR30173:SF20 1 195 4.1E-37 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF47384 807 883 1.43E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF63829 354 571 1.63E-18 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423:SF486 341 476 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423:SF486 796 1035 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423:SF486 522 634 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF55874 871 1035 2.75E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF50998 156 426 8.63E-14 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF50998 483 511 8.63E-14 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:2.120.10.30 491 627 1.1E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:1.10.287.130 807 878 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:2.120.10.30 28 186 7.2E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:2.120.10.30 260 376 6.8E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:2.120.10.30 397 490 2.3E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SMART SM00387 927 1035 6.2E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423 341 476 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423 796 1035 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PANTHER PTHR24423 522 634 8.6E-68 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 524 543 0.017 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 472 495 0.017 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 25 48 2.1E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 338 360 0.0061 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 291 312 4.1E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07494 Two component regulator propeller 70 92 7.3E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Gene3D G3DSA:3.30.565.10 887 1035 9.6E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 965 979 6.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 983 993 6.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 6.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 928 1034 5.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SMART SM00388 816 882 1.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF07495 Y_Y_Y domain 699 761 1.1E-11 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 SUPERFAMILY SSF63829 27 190 5.36E-12 T 23-04-2016 NIAKO_RS06390 b45a5a06ae4594aaabffb6d1eceb26c7 1035 Pfam PF00512 His Kinase A (phospho-acceptor) domain 816 881 1.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 SUPERFAMILY SSF48179 210 300 4.76E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 416 6.4E-119 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 PIRSF PIRSF000124 7 430 2.3E-54 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 Gene3D G3DSA:3.40.50.720 241 426 1.7E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 191 7.6E-37 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 299 2.3E-22 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 PIRSF PIRSF500136 1 432 3.7E-147 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 Gene3D G3DSA:3.40.50.720 4 231 4.0E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 SUPERFAMILY SSF51735 10 199 3.95E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 PANTHER PTHR11374 4 420 7.6E-223 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 SUPERFAMILY SSF52413 311 425 1.31E-26 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 326 421 4.7E-22 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 PANTHER PTHR11374:SF25 4 420 7.6E-223 T 23-04-2016 NIAKO_RS26340 60e856c6447713b5b076890c34f6abff 432 SMART SM00984 326 425 5.3E-31 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 Gene3D G3DSA:2.160.20.10 48 533 5.6E-93 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 PANTHER PTHR31339:SF0 48 368 1.3E-57 T 23-04-2016 NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 PANTHER PTHR31339 48 368 1.3E-57 T 23-04-2016 NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SUPERFAMILY SSF51126 46 475 4.13E-75 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 287 309 1400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 502 534 3200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 214 239 2500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 314 337 1400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 240 262 1000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 SMART SM00710 398 451 3000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS29345 0e2491ed381df20175b633ac227af180 558 Pfam PF00295 Glycosyl hydrolases family 28 77 365 3.3E-31 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS07820 fa7ecec94b47e3be98d46fd94d462e72 413 PANTHER PTHR36927 10 399 4.3E-58 T 23-04-2016 NIAKO_RS07820 fa7ecec94b47e3be98d46fd94d462e72 413 Pfam PF01757 Acyltransferase family 12 365 8.6E-27 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 PANTHER PTHR11019 184 318 1.1E-33 T 23-04-2016 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 Gene3D G3DSA:1.10.10.60 220 276 8.9E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 Pfam PF12833 Helix-turn-helix domain 247 322 9.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 SUPERFAMILY SSF46689 276 321 3.58E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 PANTHER PTHR11019:SF61 184 318 1.1E-33 T 23-04-2016 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 SMART SM00342 239 322 1.1E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 4.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 4.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS36280 c8da29420610b5998623ee3bba3befb7 323 Gene3D G3DSA:1.10.10.60 277 320 7.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 SUPERFAMILY SSF46689 256 304 8.24E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 PANTHER PTHR11019:SF50 37 304 6.0E-34 T 23-04-2016 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 Gene3D G3DSA:1.10.10.60 256 303 4.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 PANTHER PTHR11019 37 304 6.0E-34 T 23-04-2016 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 Pfam PF12833 Helix-turn-helix domain 224 303 1.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 5.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 5.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02445 8998fea18f248c0fb02db4bb7287eada 305 SMART SM00342 218 301 1.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Pfam PF00801 PKD domain 420 480 8.6E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 767 840 2.2E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 SMART SM00089 415 495 4.1E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 SUPERFAMILY SSF49299 408 492 2.75E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Pfam PF01562 Reprolysin family propeptide 78 166 2.5E-5 T 23-04-2016 IPR002870 Peptidase M12B, propeptide GO:0004222|GO:0006508|GO:0008270 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Gene3D G3DSA:3.40.390.10 205 407 5.3E-28 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 PANTHER PTHR11905 114 406 2.7E-22 T 23-04-2016 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 SUPERFAMILY SSF55486 206 407 4.05E-27 T 23-04-2016 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Gene3D G3DSA:2.60.40.10 669 753 6.0E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Pfam PF13688 Metallo-peptidase family M12 209 401 5.8E-11 T 23-04-2016 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 PANTHER PTHR11905:SF144 114 406 2.7E-22 T 23-04-2016 NIAKO_RS36980 d2074bdb75a0fd8c2298975360c4a4d4 843 Gene3D G3DSA:2.60.40.670 413 494 1.8E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13415 9b8637bd9aa2d68dd670ab15fbf356d2 453 Pfam PF07980 SusD family 314 452 3.9E-26 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13415 9b8637bd9aa2d68dd670ab15fbf356d2 453 Gene3D G3DSA:1.25.40.10 193 390 4.2E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13415 9b8637bd9aa2d68dd670ab15fbf356d2 453 SUPERFAMILY SSF48452 2 452 6.03E-98 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13415 9b8637bd9aa2d68dd670ab15fbf356d2 453 Pfam PF14322 Starch-binding associating with outer membrane 12 210 2.8E-30 T 23-04-2016 NIAKO_RS11355 aab0c4bd2b097f14aad0a45a5933ba7f 191 SUPERFAMILY SSF52540 5 184 2.81E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11355 aab0c4bd2b097f14aad0a45a5933ba7f 191 PANTHER PTHR24220:SF0 8 182 1.8E-74 T 23-04-2016 NIAKO_RS11355 aab0c4bd2b097f14aad0a45a5933ba7f 191 Gene3D G3DSA:3.40.50.300 2 184 2.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11355 aab0c4bd2b097f14aad0a45a5933ba7f 191 PANTHER PTHR24220 8 182 1.8E-74 T 23-04-2016 NIAKO_RS11355 aab0c4bd2b097f14aad0a45a5933ba7f 191 Pfam PF00005 ABC transporter 23 165 1.8E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 247 277 3.4E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.40.170.20 389 463 1.9E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.40.170.20 1045 1097 1.9E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.40.170.20 275 295 1.9E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.40.170.20 508 916 1.9E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.40.170.20 966 991 1.9E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 56 1135 4.2E-177 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 271 7.4E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 SUPERFAMILY SSF56935 955 1008 1.83E-70 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 SUPERFAMILY SSF56935 134 307 1.83E-70 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 SUPERFAMILY SSF56935 389 458 1.83E-70 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 SUPERFAMILY SSF56935 597 895 1.83E-70 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 SUPERFAMILY SSF56935 502 554 1.83E-70 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 Gene3D G3DSA:2.170.130.10 145 274 3.2E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532 616 1134 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532 50 218 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532 238 349 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532 370 434 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532 470 507 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532:SF57 616 1134 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532:SF57 50 218 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532:SF57 238 349 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532:SF57 370 434 6.1E-165 T 23-04-2016 NIAKO_RS22330 5d880bf51c5b3b3ea862bb16e119c480 1136 PANTHER PTHR11532:SF57 470 507 6.1E-165 T 23-04-2016 NIAKO_RS31815 9bd2b647ebf292043408620386477c77 252 Pfam PF13715 CarboxypepD_reg-like domain 27 105 2.9E-8 T 23-04-2016 NIAKO_RS31815 9bd2b647ebf292043408620386477c77 252 Gene3D G3DSA:2.60.40.1120 27 101 4.1E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS31815 9bd2b647ebf292043408620386477c77 252 SUPERFAMILY SSF49464 25 105 7.72E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 Pfam PF07730 Histidine kinase 71 136 6.1E-7 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 SMART SM00387 174 273 3.0E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 SUPERFAMILY SSF55874 174 270 1.28E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 Gene3D G3DSA:3.30.565.10 112 139 4.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 Gene3D G3DSA:3.30.565.10 172 274 4.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 179 270 1.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 PANTHER PTHR24421:SF1 24 275 2.4E-24 T 23-04-2016 NIAKO_RS25070 63aa671ec5d948bb4cd1edb3072b3cf6 281 PANTHER PTHR24421 24 275 2.4E-24 T 23-04-2016 NIAKO_RS26565 7d0ef5e0454be46478990d8d653b18fc 418 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 344 415 3.1E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Gene3D G3DSA:3.30.450.20 127 225 1.2E-8 T 23-04-2016 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SUPERFAMILY SSF55785 25 138 7.5E-24 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Gene3D G3DSA:3.30.565.10 353 518 4.4E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 5.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 5.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 5.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 5.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SMART SM00387 411 521 2.5E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Gene3D G3DSA:3.30.450.20 10 126 7.0E-19 T 23-04-2016 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SMART SM00091 13 79 3.7E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SMART SM00091 141 215 16.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SUPERFAMILY SSF55874 357 518 9.69E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SUPERFAMILY SSF55785 125 219 1.01E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Gene3D G3DSA:3.30.450.20 226 272 3.5E-4 T 23-04-2016 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 367 2.7E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 134 3.0E-23 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Pfam PF13426 PAS domain 24 128 1.3E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PANTHER PTHR24423 295 520 3.1E-92 T 23-04-2016 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 PANTHER PTHR24423 4 269 3.1E-92 T 23-04-2016 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Pfam PF13188 PAS domain 143 183 0.053 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 519 3.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 Gene3D G3DSA:1.10.287.130 291 352 4.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SMART SM00388 299 367 1.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36630 9002a5abd332df87718d8dd1e930721b 529 SUPERFAMILY SSF47384 284 368 2.55E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 Gene3D G3DSA:3.60.110.10 1 260 4.9E-52 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 Gene3D G3DSA:3.40.50.620 292 553 1.9E-68 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 TIGRFAM TIGR00552 nadE: NAD+ synthetase 304 548 5.7E-60 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 Pfam PF00795 Carbon-nitrogen hydrolase 2 251 1.2E-19 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 SUPERFAMILY SSF56317 1 250 9.68E-50 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 Pfam PF02540 NAD synthase 300 545 8.2E-71 T 23-04-2016 IPR022310 NAD/GMP synthase NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 PANTHER PTHR23090 1 565 6.7E-135 T 23-04-2016 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 PIRSF PIRSF006630 1 570 5.9E-178 T 23-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 NIAKO_RS27970 a461c4e390aa69ccd4e2cf7ac143d315 571 SUPERFAMILY SSF52402 291 553 4.41E-70 T 23-04-2016 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 Pfam PF12833 Helix-turn-helix domain 244 318 2.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 Gene3D G3DSA:3.40.50.880 3 221 1.4E-34 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 PANTHER PTHR11019:SF68 92 324 2.1E-50 T 23-04-2016 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 SUPERFAMILY SSF52317 1 194 7.55E-32 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 Pfam PF01965 DJ-1/PfpI family 39 178 6.1E-13 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 PANTHER PTHR11019 92 324 2.1E-50 T 23-04-2016 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 Gene3D G3DSA:1.10.10.60 222 269 1.2E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 SMART SM00342 233 316 4.3E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 Gene3D G3DSA:1.10.10.60 270 320 2.1E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 SUPERFAMILY SSF46689 269 319 4.93E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01330 1dbd8dd650407c4409cf090a1dcec8e1 332 SUPERFAMILY SSF46689 218 267 6.72E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 82 24.379 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 PANTHER PTHR33280:SF2 1 79 7.5E-30 T 23-04-2016 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 SUPERFAMILY SSF143800 1 80 2.71E-19 T 23-04-2016 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 Pfam PF01197 Ribosomal protein L31 1 80 9.8E-28 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.1E-14 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 PRINTS PR01249 Ribosomal protein L31 signature 46 61 5.1E-14 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 PRINTS PR01249 Ribosomal protein L31 signature 61 79 5.1E-14 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 81 7.3E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 ProSitePatterns PS01143 Ribosomal protein L31 signature. 50 71 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10700 7fc7e233d7f38aa1a5278e6282ed5047 83 PANTHER PTHR33280 1 79 7.5E-30 T 23-04-2016 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 PANTHER PTHR40394:SF2 1 193 6.5E-13 T 23-04-2016 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 Gene3D G3DSA:1.10.760.10 9 22 1.7E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 Gene3D G3DSA:1.10.760.10 99 212 1.7E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 SUPERFAMILY SSF46626 94 203 5.01E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 105 189 3.3E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31845 9238d2dc5c89369612ee2a832b0a980b 231 PANTHER PTHR40394 1 193 6.5E-13 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Pfam PF09334 tRNA synthetases class I (M) 38 178 1.6E-14 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 923 20.943 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 3.3E-38 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PRINTS PR00985 Leucyl-tRNA synthetase signature 277 296 3.3E-38 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PRINTS PR00985 Leucyl-tRNA synthetase signature 611 621 3.3E-38 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 557 3.3E-38 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PRINTS PR00985 Leucyl-tRNA synthetase signature 578 600 3.3E-38 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 284 462 4.0E-62 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946:SF7 302 327 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946:SF7 1 146 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946:SF7 693 923 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946:SF7 211 269 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946:SF7 348 625 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:3.40.50.620 696 725 5.8E-141 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:3.40.50.620 1 145 5.8E-141 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:3.40.50.620 210 284 5.8E-141 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:3.40.50.620 484 627 5.8E-141 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:3.90.740.10 285 483 1.3E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF52374 2 146 3.25E-114 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF52374 211 288 3.25E-114 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF52374 475 663 3.25E-114 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF52374 697 745 3.25E-114 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 695 723 1.9E-4 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Pfam PF08264 Anticodon-binding domain of tRNA 774 886 6.3E-17 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946 302 327 0.0 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946 1 146 0.0 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946 693 923 0.0 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946 211 269 0.0 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 PANTHER PTHR11946 348 625 0.0 T 23-04-2016 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 206 923 5.1E-220 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF47323 740 923 4.3E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 SUPERFAMILY SSF50677 288 474 4.19E-45 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS34165 d3696968569011d973d1cc617e30ead9 923 Gene3D G3DSA:1.10.730.10 726 859 1.5E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 PANTHER PTHR11731:SF142 475 886 2.5E-69 T 23-04-2016 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 SUPERFAMILY SSF82171 43 131 6.8E-17 T 23-04-2016 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 SUPERFAMILY SSF82171 349 584 6.8E-17 T 23-04-2016 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 SUPERFAMILY SSF82171 204 307 6.8E-17 T 23-04-2016 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 SUPERFAMILY SSF53474 616 875 1.22E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 PANTHER PTHR11731 475 886 2.5E-69 T 23-04-2016 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Pfam PF00326 Prolyl oligopeptidase family 691 875 4.5E-24 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Gene3D G3DSA:3.40.50.1820 616 876 1.9E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Gene3D G3DSA:2.120.10.30 326 393 8.7E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Gene3D G3DSA:2.120.10.30 185 290 8.7E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Gene3D G3DSA:2.120.10.30 40 104 8.7E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11830 0a522d791e072b482c9c7b517907b2f9 915 Gene3D G3DSA:2.120.10.30 394 582 1.1E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 Pfam PF00083 Sugar (and other) transporter 15 441 1.9E-115 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 SUPERFAMILY SSF103473 7 440 3.79E-70 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PANTHER PTHR23500 10 441 2.3E-152 T 23-04-2016 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 Gene3D G3DSA:1.20.1250.20 251 439 1.5E-21 T 23-04-2016 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 Gene3D G3DSA:1.20.1250.20 17 201 2.7E-30 T 23-04-2016 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PANTHER PTHR23500:SF22 10 441 2.3E-152 T 23-04-2016 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 86 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 304 321 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PRINTS PR00171 Sugar transporter signature 368 380 2.5E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PRINTS PR00171 Sugar transporter signature 260 270 2.5E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PRINTS PR00171 Sugar transporter signature 106 125 2.5E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PRINTS PR00171 Sugar transporter signature 345 366 2.5E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 PRINTS PR00171 Sugar transporter signature 22 32 2.5E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17485 f99ccbb540ae86a4cf80c71df6d114ed 444 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 2 440 1.3E-112 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Gene3D G3DSA:3.40.50.970 348 538 1.2E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 PANTHER PTHR11624:SF21 337 667 1.2E-143 T 23-04-2016 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 PANTHER PTHR11624:SF21 12 289 1.2E-143 T 23-04-2016 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Pfam PF02780 Transketolase, C-terminal domain 538 653 1.4E-24 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 SMART SM00861 350 523 3.5E-53 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 SUPERFAMILY SSF52922 533 666 8.25E-30 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Pfam PF00676 Dehydrogenase E1 component 19 301 2.6E-71 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Gene3D G3DSA:3.40.50.970 5 308 5.5E-103 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 SUPERFAMILY SSF52518 350 535 1.26E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 PANTHER PTHR11624 337 667 1.2E-143 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 PANTHER PTHR11624 12 289 1.2E-143 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Gene3D G3DSA:3.40.50.920 539 657 2.2E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 SUPERFAMILY SSF52518 4 312 2.4E-84 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS31745 a1125553103a4e550d060fe2ca707fdf 667 Pfam PF02779 Transketolase, pyrimidine binding domain 353 522 3.6E-40 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 PANTHER PTHR21299 1 283 2.2E-101 T 23-04-2016 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 SUPERFAMILY SSF52374 1 283 1.84E-89 T 23-04-2016 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 281 7.3E-90 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 Gene3D G3DSA:3.30.1300.10 180 282 2.6E-24 T 23-04-2016 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 33.29 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 PANTHER PTHR21299:SF1 1 283 2.2E-101 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 282 3.4E-82 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NIAKO_RS07495 4670a5af0101d7d36485f68ed6ce01a8 283 Gene3D G3DSA:3.40.50.620 1 176 2.1E-62 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS35485 5a98a791d01927ebb5601b442f6ce03b 116 PANTHER PTHR11058:SF5 4 115 1.3E-36 T 23-04-2016 NIAKO_RS35485 5a98a791d01927ebb5601b442f6ce03b 116 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 115 1.3E-32 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS35485 5a98a791d01927ebb5601b442f6ce03b 116 PANTHER PTHR11058 4 115 1.3E-36 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS29000 eb954e1de2a073cf56a5d604422fd8c1 359 SUPERFAMILY SSF52540 57 341 3.27E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29000 eb954e1de2a073cf56a5d604422fd8c1 359 PANTHER PTHR22908 42 295 2.7E-97 T 23-04-2016 NIAKO_RS29000 eb954e1de2a073cf56a5d604422fd8c1 359 Pfam PF07728 AAA domain (dynein-related subfamily) 78 216 8.6E-35 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NIAKO_RS29000 eb954e1de2a073cf56a5d604422fd8c1 359 Gene3D G3DSA:3.40.50.300 59 230 4.0E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29000 eb954e1de2a073cf56a5d604422fd8c1 359 PANTHER PTHR22908:SF67 42 295 2.7E-97 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 139 183 1.62E-19 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:3.30.2090.10 728 817 8.9E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:3.30.2090.10 183 271 2.9E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 815 864 5.49E-25 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 679 728 5.49E-25 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 38 131 1.57E-26 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82866 838 1033 1.57E-43 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82866 296 497 1.01E-49 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:1.10.3850.10 821 1034 3.6E-55 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:3.30.70.1430 38 139 6.4E-32 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1033 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:1.20.1640.10 291 501 2.3E-57 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82714 184 270 3.4E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 573 678 9.42E-19 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82693 273 327 1.62E-19 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 SUPERFAMILY SSF82714 729 815 1.57E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PANTHER PTHR32063 1 1040 0.0 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 560 577 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.6E-88 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 Gene3D G3DSA:3.30.70.1430 575 678 1.6E-19 T 23-04-2016 NIAKO_RS25145 31c2a7857bafe378dce97a1e3ae8ce58 1053 PANTHER PTHR32063:SF9 1 1040 0.0 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 Gene3D G3DSA:3.30.70.1300 54 123 3.1E-7 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 PANTHER PTHR30327 1 183 2.0E-50 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 3 180 25.195 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 PANTHER PTHR30327:SF1 1 183 2.0E-50 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 SUPERFAMILY SSF143456 6 178 5.63E-55 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 Pfam PF02622 Uncharacterized ACR, COG1678 14 167 1.7E-44 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 Gene3D G3DSA:3.40.1740.10 124 170 1.1E-29 T 23-04-2016 NIAKO_RS35960 d8a67ec9180138501ddc159e61a60836 183 Gene3D G3DSA:3.40.1740.10 3 42 1.1E-29 T 23-04-2016 NIAKO_RS01020 cd28d655b9b4090045b47e0278b374d6 357 Gene3D G3DSA:2.40.160.20 175 273 1.9E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS01020 cd28d655b9b4090045b47e0278b374d6 357 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 3 328 8.1E-44 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS01020 cd28d655b9b4090045b47e0278b374d6 357 Pfam PF11751 Protein of unknown function (DUF3308) 19 327 1.6E-34 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Pfam PF08443 RimK-like ATP-grasp domain 215 316 5.6E-6 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Pfam PF08245 Mur ligase middle domain 487 697 2.7E-25 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 863 0.0 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Pfam PF02875 Mur ligase family, glutamate ligase domain 722 805 4.8E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Gene3D G3DSA:3.40.1190.10 480 715 1.9E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 SUPERFAMILY SSF53244 722 850 1.32E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Gene3D G3DSA:3.90.190.20 725 850 3.0E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 PANTHER PTHR23135 389 854 9.8E-150 T 23-04-2016 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 SUPERFAMILY SSF56059 216 495 2.02E-31 T 23-04-2016 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 SUPERFAMILY SSF53623 445 733 4.06E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Gene3D G3DSA:3.30.470.20 210 334 2.2E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 Gene3D G3DSA:3.30.470.20 395 460 2.2E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS15710 18c32f8e53e9857aace3ed31fcac9dfa 877 PANTHER PTHR23135:SF18 389 854 9.8E-150 T 23-04-2016 NIAKO_RS12510 ade6e3dffdbf41ef122dc4bd8227d3ae 123 PANTHER PTHR36114:SF2 36 114 1.0E-22 T 23-04-2016 NIAKO_RS12510 ade6e3dffdbf41ef122dc4bd8227d3ae 123 Gene3D G3DSA:2.60.120.10 19 116 9.3E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS12510 ade6e3dffdbf41ef122dc4bd8227d3ae 123 Pfam PF07883 Cupin domain 55 110 3.6E-10 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS12510 ade6e3dffdbf41ef122dc4bd8227d3ae 123 PANTHER PTHR36114 36 114 1.0E-22 T 23-04-2016 NIAKO_RS12510 ade6e3dffdbf41ef122dc4bd8227d3ae 123 SUPERFAMILY SSF51182 18 117 3.82E-19 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Gene3D G3DSA:3.40.50.80 96 239 9.5E-39 T 23-04-2016 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PANTHER PTHR19370:SF93 5 265 4.7E-57 T 23-04-2016 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 278 350 4.9E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 SUPERFAMILY SSF63380 4 105 1.01E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 SUPERFAMILY SSF54292 236 359 3.23E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 SUPERFAMILY SSF52343 95 243 2.23E-33 T 23-04-2016 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Pfam PF00970 Oxidoreductase FAD-binding domain 8 105 8.1E-10 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PANTHER PTHR19370 5 265 4.7E-57 T 23-04-2016 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 6.1E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 6.1E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 6.1E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 151 6.1E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 6.1E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 308 316 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 5 360 1.1E-141 T 23-04-2016 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00930 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Gene3D G3DSA:3.10.20.30 240 360 6.2E-34 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Pfam PF00175 Oxidoreductase NAD-binding domain 119 224 1.7E-17 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 Gene3D G3DSA:2.40.30.10 3 95 9.2E-25 T 23-04-2016 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00406 Cytochrome B5 reductase signature 117 136 1.7E-7 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00406 Cytochrome B5 reductase signature 92 106 1.7E-7 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00406 Cytochrome B5 reductase signature 154 165 1.7E-7 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NIAKO_RS29800 0523af052eb5fce16cdd908cc2e1ace1 362 PRINTS PR00406 Cytochrome B5 reductase signature 213 221 1.7E-7 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NIAKO_RS13135 59fe48dccc0a243e8dea53f45e322506 198 Pfam PF12867 DinB superfamily 35 187 2.4E-18 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS13135 59fe48dccc0a243e8dea53f45e322506 198 SUPERFAMILY SSF109854 26 191 2.14E-19 T 23-04-2016 NIAKO_RS13135 59fe48dccc0a243e8dea53f45e322506 198 Gene3D G3DSA:1.20.120.450 17 192 2.4E-22 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 Hamap MF_01393 ATP synthase subunit a [atpB]. 133 374 12.704 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 SUPERFAMILY SSF81336 208 367 4.84E-31 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 Gene3D G3DSA:1.20.120.220 208 372 8.0E-35 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 151 369 3.7E-37 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PANTHER PTHR11410:SF0 144 378 2.7E-50 T 23-04-2016 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 Pfam PF00119 ATP synthase A chain 155 367 2.1E-45 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PANTHER PTHR11410 144 378 2.7E-50 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PRINTS PR00123 ATP synthase A subunit signature 293 315 2.1E-19 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PRINTS PR00123 ATP synthase A subunit signature 216 232 2.1E-19 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PRINTS PR00123 ATP synthase A subunit signature 354 369 2.1E-19 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS33985 24f62706626fa72f430a3b86ac45d604 389 PRINTS PR00123 ATP synthase A subunit signature 273 288 2.1E-19 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NIAKO_RS25580 d223e6d831e9fb58cc9f1251bc0c5a46 386 SUPERFAMILY SSF48230 116 330 5.13E-26 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS25580 d223e6d831e9fb58cc9f1251bc0c5a46 386 Gene3D G3DSA:1.50.10.110 112 357 7.5E-25 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS25580 d223e6d831e9fb58cc9f1251bc0c5a46 386 Pfam PF05426 Alginate lyase 75 324 3.1E-22 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 SMART SM00862 154 228 3.6E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 228 4.9E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 SUPERFAMILY SSF52172 4 169 1.27E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 SUPERFAMILY SSF46894 136 228 2.89E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 Gene3D G3DSA:1.10.10.10 132 231 5.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 SMART SM00448 6 117 3.5E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 Pfam PF00072 Response regulator receiver domain 8 117 2.9E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 PANTHER PTHR26402 6 233 4.2E-76 T 23-04-2016 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 PANTHER PTHR26402:SF606 6 233 4.2E-76 T 23-04-2016 NIAKO_RS34205 89b26ccf223292df1fbf41e34eb4a853 233 Gene3D G3DSA:3.40.50.2300 2 131 2.8E-39 T 23-04-2016 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 Gene3D G3DSA:3.40.30.10 32 203 5.0E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 Gene3D G3DSA:3.40.30.10 242 366 6.5E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 ProSitePatterns PS00194 Thioredoxin family active site. 255 273 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 Pfam PF00578 AhpC/TSA family 242 351 8.0E-12 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 Pfam PF00578 AhpC/TSA family 33 167 2.5E-19 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 PANTHER PTHR10681:SF91 21 330 4.2E-41 T 23-04-2016 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 SUPERFAMILY SSF52833 238 366 9.14E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 PANTHER PTHR10681 21 330 4.2E-41 T 23-04-2016 NIAKO_RS03645 f0cde97deb5058badd7af803c3b96567 376 SUPERFAMILY SSF52833 30 217 2.25E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SMART SM00387 936 1046 3.1E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF00512 His Kinase A (phospho-acceptor) domain 825 889 1.6E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SUPERFAMILY SSF50998 43 289 3.22E-15 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SUPERFAMILY SSF50998 343 377 3.22E-15 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SMART SM00388 824 890 6.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SUPERFAMILY SSF47384 815 891 9.02E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423 803 1030 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423 27 159 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423 248 365 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Gene3D G3DSA:3.30.565.10 877 1046 1.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Gene3D G3DSA:2.120.10.30 32 139 1.0E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Gene3D G3DSA:2.120.10.30 347 576 1.9E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Gene3D G3DSA:2.120.10.30 162 279 2.0E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF07495 Y_Y_Y domain 706 769 1.0E-13 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Gene3D G3DSA:1.10.287.130 816 876 2.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SUPERFAMILY SSF63829 352 592 2.16E-18 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 SUPERFAMILY SSF55874 880 1044 1.44E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF07494 Two component regulator propeller 294 315 8.8E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF07494 Two component regulator propeller 35 57 2.9E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF07494 Two component regulator propeller 82 102 5.0E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1006 1024 2.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1002 2.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PRINTS PR00344 Bacterial sensor protein C-terminal signature 974 988 2.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423:SF486 803 1030 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423:SF486 27 159 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 PANTHER PTHR24423:SF486 248 365 1.3E-70 T 23-04-2016 NIAKO_RS00170 29e7e8677683a9e4cf87eab99b3b121f 1059 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 940 1034 3.9E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS26125 1cfbed7d8c56e51541a4c8849b0ef059 203 PANTHER PTHR19136:SF81 1 193 4.3E-14 T 23-04-2016 NIAKO_RS26125 1cfbed7d8c56e51541a4c8849b0ef059 203 SUPERFAMILY SSF53448 5 160 2.28E-17 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26125 1cfbed7d8c56e51541a4c8849b0ef059 203 Pfam PF12804 MobA-like NTP transferase domain 6 141 6.2E-19 T 23-04-2016 IPR025877 MobA-like NTP transferase NIAKO_RS26125 1cfbed7d8c56e51541a4c8849b0ef059 203 Gene3D G3DSA:3.90.550.10 1 192 4.1E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26125 1cfbed7d8c56e51541a4c8849b0ef059 203 PANTHER PTHR19136 1 193 4.3E-14 T 23-04-2016 NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 PANTHER PTHR33797 1 127 5.4E-42 T 23-04-2016 NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 129 2.7E-48 T 23-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 SUPERFAMILY SSF82784 2 131 1.18E-31 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 Pfam PF02566 OsmC-like protein 40 131 1.1E-18 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 PANTHER PTHR33797:SF1 1 127 5.4E-42 T 23-04-2016 NIAKO_RS08630 713b5365a556c25f069408ea07c25431 138 Gene3D G3DSA:3.30.300.20 1 134 3.2E-43 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 SUPERFAMILY SSF53756 1 358 2.51E-97 T 23-04-2016 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 Gene3D G3DSA:3.40.50.2000 192 327 1.2E-5 T 23-04-2016 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 PANTHER PTHR21015:SF22 1 358 1.5E-104 T 23-04-2016 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 PANTHER PTHR21015 1 358 1.5E-104 T 23-04-2016 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 354 1.3E-87 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 1 140 2.3E-33 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 358 30.392 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 Gene3D G3DSA:3.40.50.2000 1 191 2.8E-59 T 23-04-2016 NIAKO_RS36025 38d0fd71fb86655d3cfc2a0df63b519e 359 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 336 2.5E-35 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 Pfam PF00296 Luciferase-like monooxygenase 1 302 1.2E-49 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 PANTHER PTHR30137 1 344 2.0E-131 T 23-04-2016 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 Gene3D G3DSA:3.20.20.30 1 341 2.2E-91 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 PANTHER PTHR30137:SF8 1 344 2.0E-131 T 23-04-2016 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 SUPERFAMILY SSF51679 1 340 1.77E-80 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS10955 33c3e37c42b46a147bef1e683515156b 344 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 1.6E-158 T 23-04-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PANTHER PTHR30023 40 465 8.0E-58 T 23-04-2016 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 27 411 1.3E-62 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 Gene3D G3DSA:3.40.710.10 38 82 9.8E-6 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PANTHER PTHR30023:SF0 40 465 8.0E-58 T 23-04-2016 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 1.4E-13 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 308 330 1.4E-13 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 380 394 1.4E-13 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 66 85 1.4E-13 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 449 3.8E-57 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 SUPERFAMILY SSF56601 26 453 7.31E-66 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS21645 3151abfc4f49ed2abb58f592d9f3470f 469 Gene3D G3DSA:3.40.710.10 248 453 1.3E-34 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 SUPERFAMILY SSF143034 2 62 5.89E-22 T 23-04-2016 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 PANTHER PTHR33343 1 62 2.3E-23 T 23-04-2016 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 Pfam PF01632 Ribosomal protein L35 2 62 1.2E-24 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.9E-25 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.214 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.3E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NIAKO_RS10760 f554a71f4d3f32d69c9f8c3a89278677 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.3E-18 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SUPERFAMILY SSF54862 83 213 8.79E-33 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SMART SM00929 88 128 1.1E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Gene3D G3DSA:2.40.40.20 812 885 2.5E-7 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Gene3D G3DSA:3.40.50.740 278 338 5.0E-21 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Gene3D G3DSA:3.40.50.740 503 682 5.0E-21 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Pfam PF00384 Molybdopterin oxidoreductase 589 637 7.0E-6 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615 481 675 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615 362 423 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615 732 890 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615 3 318 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 223 275 2.3E-8 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Gene3D G3DSA:2.20.25.90 223 276 6.2E-14 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SUPERFAMILY SSF50692 810 887 2.94E-8 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Gene3D G3DSA:3.10.20.30 6 63 2.5E-8 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615:SF134 481 675 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615:SF134 362 423 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615:SF134 732 890 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 PANTHER PTHR11615:SF134 3 318 8.7E-243 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 1.4E-14 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SUPERFAMILY SSF53706 219 685 5.72E-63 T 23-04-2016 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 648 1.3E-182 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SUPERFAMILY SSF54292 2 77 5.76E-19 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 SMART SM00926 221 275 1.8E-10 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NIAKO_RS14570 c299f5d4d0a80e10475faa974305b9c9 901 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 5.9E-13 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 PANTHER PTHR41533 5 544 7.8E-84 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 SUPERFAMILY SSF47090 245 317 4.08E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 Pfam PF03734 L,D-transpeptidase catalytic domain 342 487 2.2E-30 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 SUPERFAMILY SSF141523 340 395 7.85E-20 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 SUPERFAMILY SSF141523 427 477 7.85E-20 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 Pfam PF01471 Putative peptidoglycan binding domain 258 308 3.9E-6 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 Gene3D G3DSA:2.40.440.10 429 479 3.6E-11 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 Gene3D G3DSA:2.40.440.10 337 386 3.6E-11 T 23-04-2016 NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 Gene3D G3DSA:1.10.101.10 246 319 5.5E-13 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS29120 e1f8907c25feb4fb67e1019d0ddb4b9e 551 PANTHER PTHR41533:SF1 5 544 7.8E-84 T 23-04-2016 NIAKO_RS13380 6dbe957628606879d0121d663469fdef 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 31 183 1.4E-12 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS13380 6dbe957628606879d0121d663469fdef 201 Gene3D G3DSA:3.40.50.1110 19 192 1.5E-27 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS13380 6dbe957628606879d0121d663469fdef 201 SUPERFAMILY SSF52266 12 193 1.42E-33 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 Gene3D G3DSA:1.10.1740.10 6 75 1.9E-9 T 23-04-2016 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 154 7.9E-16 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 Pfam PF08281 Sigma-70, region 4 101 151 3.9E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 PANTHER PTHR30173:SF23 5 171 4.5E-34 T 23-04-2016 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 SUPERFAMILY SSF88659 99 154 5.23E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 PANTHER PTHR30173 5 171 4.5E-34 T 23-04-2016 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 9 171 1.7E-50 T 23-04-2016 IPR014304 RNA polymerase sigma-Z type NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 Pfam PF04542 Sigma-70 region 2 10 74 3.7E-6 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 Gene3D G3DSA:1.10.10.10 100 155 2.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20050 310b9b9ce293be75e1fb32b0d4b464f9 174 SUPERFAMILY SSF88946 6 83 2.08E-10 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 175 5.7E-16 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 SUPERFAMILY SSF48452 321 411 9.7E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 Gene3D G3DSA:1.25.40.10 320 406 6.0E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 SUPERFAMILY SSF88659 115 175 1.44E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 PANTHER PTHR30173:SF15 13 392 2.3E-102 T 23-04-2016 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 Pfam PF04542 Sigma-70 region 2 25 84 2.5E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 Gene3D G3DSA:1.10.1740.10 6 104 1.5E-12 T 23-04-2016 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 Gene3D G3DSA:1.10.10.10 114 175 2.7E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 SUPERFAMILY SSF88946 6 102 2.55E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01490 7c72a81384801a0f14e54371d5ba8bcf 428 PANTHER PTHR30173 13 392 2.3E-102 T 23-04-2016 NIAKO_RS13445 60e5a8a1a701d79291ef7f79db47fccd 171 Gene3D G3DSA:3.40.50.180 3 170 2.9E-60 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS13445 60e5a8a1a701d79291ef7f79db47fccd 171 PANTHER PTHR24421 1 166 2.6E-39 T 23-04-2016 NIAKO_RS13445 60e5a8a1a701d79291ef7f79db47fccd 171 SUPERFAMILY SSF52738 2 170 3.14E-51 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS13445 60e5a8a1a701d79291ef7f79db47fccd 171 Pfam PF01339 CheB methylesterase 3 165 6.7E-54 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS13445 60e5a8a1a701d79291ef7f79db47fccd 171 PANTHER PTHR24421:SF16 1 166 2.6E-39 T 23-04-2016 NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 SUPERFAMILY SSF56349 136 426 8.24E-29 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 Pfam PF13102 Phage integrase SAM-like domain 9 190 2.1E-18 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 Gene3D G3DSA:1.10.443.10 250 428 1.9E-19 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 Pfam PF00589 Phage integrase family 250 420 3.5E-10 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 PANTHER PTHR30349 64 451 3.0E-39 T 23-04-2016 NIAKO_RS24010 0be0c33051a9f262997612c3ad0b7670 457 PANTHER PTHR30349:SF34 64 451 3.0E-39 T 23-04-2016 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 485 698 5.2E-102 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 Gene3D G3DSA:1.10.760.10 496 695 6.8E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 PANTHER PTHR10422:SF21 536 641 1.5E-297 T 23-04-2016 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 PANTHER PTHR10422:SF21 1 465 1.5E-297 T 23-04-2016 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 441 1.7E-122 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 468 2.4E-196 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 Gene3D G3DSA:1.20.210.10 9 479 7.5E-73 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 SUPERFAMILY SSF81442 8 484 1.44E-118 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 PANTHER PTHR10422 536 641 1.5E-297 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 PANTHER PTHR10422 1 465 1.5E-297 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 486 700 4.6E-82 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 SUPERFAMILY SSF46626 497 636 6.52E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS09545 73d050b152b53fbbae188f1417b9444f 709 SUPERFAMILY SSF46626 670 695 6.52E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS35850 f153e3e82fbde0d17587b5a761af80ee 553 Pfam PF00474 Sodium:solute symporter family 35 449 7.5E-55 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS35850 f153e3e82fbde0d17587b5a761af80ee 553 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 431 451 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35850 f153e3e82fbde0d17587b5a761af80ee 553 PANTHER PTHR11819:SF7 4 523 4.6E-119 T 23-04-2016 NIAKO_RS35850 f153e3e82fbde0d17587b5a761af80ee 553 PANTHER PTHR11819 4 523 4.6E-119 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS35850 f153e3e82fbde0d17587b5a761af80ee 553 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 449 5.3E-68 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 PANTHER PTHR11019 214 288 4.3E-17 T 23-04-2016 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 Pfam PF12833 Helix-turn-helix domain 211 288 8.7E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 SMART SM00342 204 288 5.1E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 Gene3D G3DSA:1.10.10.60 245 290 1.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 SUPERFAMILY SSF46689 244 289 4.12E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 Gene3D G3DSA:1.10.630.10 73 244 3.8E-4 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS23900 7aea24d31b93fb474a20b8765d2d41a3 292 PANTHER PTHR11019:SF45 214 288 4.3E-17 T 23-04-2016 NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 Gene3D G3DSA:2.170.130.10 113 214 1.7E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 Pfam PF14905 Outer membrane protein beta-barrel family 368 781 1.4E-91 T 23-04-2016 NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 Gene3D G3DSA:2.40.170.20 215 783 5.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 Pfam PF13620 Carboxypeptidase regulatory-like domain 15 92 1.1E-12 T 23-04-2016 NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 SUPERFAMILY SSF49464 16 113 7.85E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 Gene3D G3DSA:2.60.40.1120 16 112 9.1E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS33045 963da20c6b44df243f6a6a0a35ab68e7 818 SUPERFAMILY SSF56935 119 783 1.88E-46 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 PANTHER PTHR10617:SF101 1 389 1.4E-50 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 1.3E-10 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 1.3E-10 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.3E-10 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 Pfam PF01494 FAD binding domain 4 346 5.1E-12 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 SUPERFAMILY SSF51905 4 181 6.49E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 SUPERFAMILY SSF51905 287 384 6.49E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 Gene3D G3DSA:3.30.9.10 173 337 1.6E-35 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 Gene3D G3DSA:3.50.50.60 4 172 1.3E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 PANTHER PTHR10617 1 389 1.4E-50 T 23-04-2016 NIAKO_RS14145 7eedce1828f2510e573e2cd3970a0722 415 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 5 325 1.3E-51 T 23-04-2016 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 PANTHER PTHR36509:SF2 204 324 1.2E-13 T 23-04-2016 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 PANTHER PTHR36509 204 324 1.2E-13 T 23-04-2016 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 Gene3D G3DSA:2.60.40.1610 56 97 3.6E-5 T 23-04-2016 IPR010679 Domain of unknown function DUF1254 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 Pfam PF06863 Protein of unknown function (DUF1254) 44 153 2.0E-16 T 23-04-2016 IPR010679 Domain of unknown function DUF1254 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 Pfam PF06742 Protein of unknown function (DUF1214) 228 313 1.5E-15 T 23-04-2016 IPR010621 Domain of unknown function DUF1214 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 Gene3D G3DSA:2.60.120.600 187 330 3.9E-35 T 23-04-2016 IPR010621 Domain of unknown function DUF1214 NIAKO_RS18385 1640f45b0e423da0fd728716028d5157 330 SUPERFAMILY SSF160935 27 329 1.2E-76 T 23-04-2016 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 SMART SM00342 167 251 8.3E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 PANTHER PTHR11019 120 259 8.8E-22 T 23-04-2016 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 Gene3D G3DSA:1.10.10.60 151 204 7.7E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 SUPERFAMILY SSF46689 211 255 4.03E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 204 247 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 Gene3D G3DSA:1.10.10.60 205 256 3.8E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 Pfam PF12833 Helix-turn-helix domain 176 252 9.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19170 c9bba1d2786458eca6f870ee779bbe89 264 PANTHER PTHR11019:SF126 120 259 8.8E-22 T 23-04-2016 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 112 196 1.3E-13 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 SUPERFAMILY SSF141734 9 114 9.81E-44 T 23-04-2016 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 27 99 5.6E-30 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 197 34.166 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 50 102 3.0E-18 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 110 191 8.8E-28 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 106 192 18.148 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 SUPERFAMILY SSF101386 107 196 2.43E-21 T 23-04-2016 NIAKO_RS01820 6e1b99615144fbc0ef6f203438fda170 200 PANTHER PTHR21256 10 197 4.4E-90 T 23-04-2016 NIAKO_RS23815 94fa84d629f62064370f47828c2b0a09 195 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 1.2E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS23815 94fa84d629f62064370f47828c2b0a09 195 PANTHER PTHR24567:SF33 12 191 1.7E-18 T 23-04-2016 NIAKO_RS23815 94fa84d629f62064370f47828c2b0a09 195 Gene3D G3DSA:2.60.120.10 7 158 7.2E-36 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS23815 94fa84d629f62064370f47828c2b0a09 195 PANTHER PTHR24567 12 191 1.7E-18 T 23-04-2016 NIAKO_RS23815 94fa84d629f62064370f47828c2b0a09 195 SUPERFAMILY SSF51206 17 143 1.07E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS23310 a1184589934017e1fb34ebfab2113dc5 232 Pfam PF13523 Acetyltransferase (GNAT) domain 41 179 1.0E-7 T 23-04-2016 NIAKO_RS23310 a1184589934017e1fb34ebfab2113dc5 232 Gene3D G3DSA:3.40.630.30 25 217 1.3E-10 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS23310 a1184589934017e1fb34ebfab2113dc5 232 SUPERFAMILY SSF55729 19 183 2.02E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 SUPERFAMILY SSF48208 263 719 2.27E-34 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 Gene3D G3DSA:1.20.1610.10 434 586 3.0E-57 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 Gene3D G3DSA:2.70.98.10 26 321 1.4E-98 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 Gene3D G3DSA:3.30.2080.10 587 727 8.3E-65 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 Gene3D G3DSA:1.20.1050.60 344 430 5.4E-31 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 19 725 1.5E-203 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 PANTHER PTHR12143:SF22 384 727 1.1E-212 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 PANTHER PTHR12143:SF22 5 368 1.1E-212 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 PANTHER PTHR12143 384 727 1.1E-212 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 PANTHER PTHR12143 5 368 1.1E-212 T 23-04-2016 NIAKO_RS03525 1c3061077306ae4b76de510b48ba68bc 735 Pfam PF07971 Glycosyl hydrolase family 92 240 721 4.1E-173 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS33735 5b3eb56c209da2d731df7ce45f004f89 265 PANTHER PTHR12390 10 264 4.1E-25 T 23-04-2016 NIAKO_RS33735 5b3eb56c209da2d731df7ce45f004f89 265 Pfam PF02602 Uroporphyrinogen-III synthase HemD 35 253 1.2E-32 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS33735 5b3eb56c209da2d731df7ce45f004f89 265 SUPERFAMILY SSF69618 17 258 2.35E-42 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS33735 5b3eb56c209da2d731df7ce45f004f89 265 Gene3D G3DSA:3.40.50.10090 153 264 1.2E-16 T 23-04-2016 NIAKO_RS33735 5b3eb56c209da2d731df7ce45f004f89 265 Gene3D G3DSA:3.40.50.10090 24 145 3.6E-19 T 23-04-2016 NIAKO_RS23700 7a31a961f064e7f5ac6dd2498ba06194 269 PIRSF PIRSF005054 1 267 9.2E-45 T 23-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 NIAKO_RS23700 7a31a961f064e7f5ac6dd2498ba06194 269 Pfam PF01881 CRISPR associated protein Cas6 101 264 2.2E-24 T 23-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 NIAKO_RS23700 7a31a961f064e7f5ac6dd2498ba06194 269 PANTHER PTHR36984 2 264 1.1E-16 T 23-04-2016 NIAKO_RS23700 7a31a961f064e7f5ac6dd2498ba06194 269 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 52 263 3.6E-23 T 23-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 190 25.923 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 161 1.2E-39 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 Gene3D G3DSA:3.40.50.300 1 190 5.9E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 Pfam PF13500 AAA domain 3 190 3.3E-48 T 23-04-2016 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 PANTHER PTHR21343:SF0 1 183 7.0E-45 T 23-04-2016 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 PANTHER PTHR21343 1 183 7.0E-45 T 23-04-2016 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 PIRSF PIRSF006755 1 208 1.9E-46 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS04470 16355f1b5e3146d41d2a9de35cc62b31 209 SUPERFAMILY SSF52540 1 190 3.01E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 SMART SM00421 147 204 2.0E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 PANTHER PTHR26402:SF505 3 210 1.9E-56 T 23-04-2016 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 SUPERFAMILY SSF46894 143 210 2.72E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 SUPERFAMILY SSF52172 2 135 5.69E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 PANTHER PTHR26402 3 210 1.9E-56 T 23-04-2016 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 Pfam PF00072 Response regulator receiver domain 5 117 1.9E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 Gene3D G3DSA:1.10.10.10 156 211 1.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 1.0E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 Gene3D G3DSA:3.40.50.2300 2 155 4.3E-33 T 23-04-2016 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 8.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 8.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 8.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS07340 63c4afb5726916f4be39e5501e924d44 211 SMART SM00448 3 116 5.4E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 Gene3D G3DSA:3.30.390.30 334 457 1.6E-36 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-26 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-26 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.2E-26 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.2E-26 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.2E-26 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 454 2.6E-125 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 320 4.6E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 SUPERFAMILY SSF55424 345 455 2.58E-34 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 1.6E-52 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PANTHER PTHR22912:SF145 1 458 2.0E-163 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PANTHER PTHR22912 1 458 2.0E-163 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 SUPERFAMILY SSF51905 1 320 2.48E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 Gene3D G3DSA:3.50.50.60 2 139 2.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 453 4.5E-29 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 PIRSF PIRSF000350 1 458 2.0E-113 T 23-04-2016 NIAKO_RS20635 45c4a14f3ce7ab4efad53138c71e4232 459 Gene3D G3DSA:3.50.50.60 140 333 6.7E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21530 7766ad1c1acc4ba7791d4d5011288980 406 Hamap MF_00929 Cellobiose 2-epimerase. 5 393 44.545 T 23-04-2016 IPR028584 Cellobiose 2-epimerase GO:0047736 MetaCyc: PWY-7456 NIAKO_RS21530 7766ad1c1acc4ba7791d4d5011288980 406 PANTHER PTHR15108 1 404 5.9E-60 T 23-04-2016 NIAKO_RS21530 7766ad1c1acc4ba7791d4d5011288980 406 Gene3D G3DSA:1.50.10.10 7 394 9.8E-123 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS21530 7766ad1c1acc4ba7791d4d5011288980 406 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 32 368 4.5E-45 T 23-04-2016 NIAKO_RS21530 7766ad1c1acc4ba7791d4d5011288980 406 SUPERFAMILY SSF48208 12 393 1.59E-99 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 Pfam PF00953 Glycosyl transferase family 4 103 346 1.4E-38 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 28 426 21.383 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 PANTHER PTHR22926 2 168 6.5E-119 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 PANTHER PTHR22926 203 428 6.5E-119 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 236 428 9.9E-72 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 PANTHER PTHR22926:SF5 2 168 6.5E-119 T 23-04-2016 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 PANTHER PTHR22926:SF5 203 428 6.5E-119 T 23-04-2016 NIAKO_RS36010 cb5861ee997f3b7421e9217f551473b8 428 ProSitePatterns PS01348 MraY family signature 2. 251 262 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS19085 b5663c5730724ceb564ca06fbcc18749 420 SUPERFAMILY SSF50969 346 374 2.12E-12 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS19085 b5663c5730724ceb564ca06fbcc18749 420 SUPERFAMILY SSF50969 134 256 2.12E-12 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS19085 b5663c5730724ceb564ca06fbcc18749 420 Gene3D G3DSA:2.130.10.10 341 377 1.8E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19085 b5663c5730724ceb564ca06fbcc18749 420 Gene3D G3DSA:2.130.10.10 166 244 1.8E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 178 2.6E-63 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 PIRSF PIRSF002849 2 324 2.1E-134 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 Gene3D G3DSA:3.40.50.300 30 194 2.5E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 PANTHER PTHR11603 8 324 2.1E-134 T 23-04-2016 NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 PANTHER PTHR11603:SF148 8 324 2.1E-134 T 23-04-2016 NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 Gene3D G3DSA:1.10.8.300 212 319 1.5E-37 T 23-04-2016 NIAKO_RS09880 b77bf06af00d0e4bb7ef459e3acfe2de 324 SUPERFAMILY SSF52540 18 295 2.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 Gene3D G3DSA:3.40.50.2300 6 132 7.3E-29 T 23-04-2016 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 Gene3D G3DSA:2.40.50.40 147 213 1.2E-12 T 23-04-2016 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 PANTHER PTHR26402 11 137 1.4E-29 T 23-04-2016 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 SMART SM00850 155 250 1.2E-9 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 SMART SM00448 11 119 1.7E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 Pfam PF04397 LytTr DNA-binding domain 161 245 1.7E-13 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 SUPERFAMILY SSF52172 9 136 1.25E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23430 327fee881a2eb2bf5354b95ae44b6ab1 252 Pfam PF00072 Response regulator receiver domain 13 119 6.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 Pfam PF16344 Domain of unknown function (DUF4974) 310 411 1.0E-21 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 PANTHER PTHR30273 187 414 3.9E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 PANTHER PTHR30273 1 124 3.9E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 Pfam PF04773 FecR protein 185 287 2.9E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 PANTHER PTHR30273:SF2 187 414 3.9E-65 T 23-04-2016 NIAKO_RS11670 3fcc50899e6175739a825e27c292d2c7 414 PANTHER PTHR30273:SF2 1 124 3.9E-65 T 23-04-2016 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 Pfam PF04542 Sigma-70 region 2 22 89 4.7E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 Gene3D G3DSA:1.10.10.10 111 170 3.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 PANTHER PTHR30173 1 183 1.5E-46 T 23-04-2016 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 170 1.6E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 SUPERFAMILY SSF88946 3 106 1.26E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 18 170 3.2E-42 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 PANTHER PTHR30173:SF20 1 183 1.5E-46 T 23-04-2016 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 SUPERFAMILY SSF88659 105 170 6.98E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 Pfam PF08281 Sigma-70, region 4 118 169 9.8E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09830 2e97fe4b2721e7d82bfc5fbe797884f7 186 Gene3D G3DSA:1.10.1740.10 2 101 7.2E-23 T 23-04-2016 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 Pfam PF12833 Helix-turn-helix domain 39 110 3.1E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 SMART SM00342 29 111 7.6E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 PANTHER PTHR11019 43 119 6.0E-13 T 23-04-2016 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 Gene3D G3DSA:1.10.10.60 66 109 6.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 SUPERFAMILY SSF46689 65 110 1.16E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24405 dc63a0bbf73bdab3aa6c4c1dd8bfa60c 121 Gene3D G3DSA:1.10.10.60 14 65 6.8E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28095 46b7dc5361600c28ea5b82959b9d6020 299 SUPERFAMILY SSF103481 196 292 1.31E-7 T 23-04-2016 NIAKO_RS28095 46b7dc5361600c28ea5b82959b9d6020 299 PANTHER PTHR12715 1 296 2.3E-31 T 23-04-2016 NIAKO_RS28095 46b7dc5361600c28ea5b82959b9d6020 299 SUPERFAMILY SSF103481 43 143 5.62E-15 T 23-04-2016 NIAKO_RS28095 46b7dc5361600c28ea5b82959b9d6020 299 Pfam PF00892 EamA-like transporter family 154 289 7.3E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS28095 46b7dc5361600c28ea5b82959b9d6020 299 Pfam PF00892 EamA-like transporter family 14 140 9.8E-24 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 225 4.3E-13 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 SUPERFAMILY SSF53067 7 197 4.7E-19 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 Gene3D G3DSA:3.30.420.40 3 235 6.7E-14 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 SUPERFAMILY SSF53067 228 295 6.8E-10 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 SUPERFAMILY SSF53067 346 434 6.8E-10 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 SUPERFAMILY SSF53067 7 89 6.8E-10 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 Gene3D G3DSA:3.30.420.40 386 439 4.0E-8 T 23-04-2016 NIAKO_RS17985 bf085c42c823b42d93d66f3181197a9d 459 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 374 434 1.6E-7 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-13 T 23-04-2016 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 SUPERFAMILY SSF46906 67 140 1.05E-25 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 Gene3D G3DSA:3.30.1550.10 2 71 2.7E-36 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 5.7E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 SUPERFAMILY SSF54747 3 72 2.09E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.5E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 PANTHER PTHR11661:SF7 1 142 1.6E-69 T 23-04-2016 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 3.3E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 SMART SM00649 9 140 1.1E-76 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 30.815 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 PANTHER PTHR11661 1 142 1.6E-69 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24200 514ea94c8c2a547f09fde92550c05562 147 Gene3D G3DSA:1.10.10.250 72 140 7.1E-31 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423 13 33 5.7E-25 T 23-04-2016 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 598 5.9E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SMART SM00028 291 324 57.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SMART SM00028 169 202 230.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SMART SM00028 210 244 55.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SMART SM00028 75 108 92.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 Pfam PF07568 Histidine kinase 407 482 7.3E-28 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423:SF472 341 357 5.7E-25 T 23-04-2016 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423 396 600 5.7E-25 T 23-04-2016 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SUPERFAMILY SSF48452 148 326 2.18E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423 341 357 5.7E-25 T 23-04-2016 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 Gene3D G3DSA:1.25.40.10 36 324 8.1E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 Gene3D G3DSA:3.30.565.10 462 599 9.8E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 SUPERFAMILY SSF55874 469 598 5.24E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423:SF472 13 33 5.7E-25 T 23-04-2016 NIAKO_RS27290 ca00cc25f66d026bb3154b052fc324ff 601 PANTHER PTHR24423:SF472 396 600 5.7E-25 T 23-04-2016 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 176 1.4E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 Gene3D G3DSA:1.10.10.10 114 177 3.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 PANTHER PTHR30173 1 178 2.4E-44 T 23-04-2016 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 SUPERFAMILY SSF88659 118 177 8.5E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 Pfam PF08281 Sigma-70, region 4 124 173 1.8E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 PANTHER PTHR30173:SF20 1 178 2.4E-44 T 23-04-2016 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 SUPERFAMILY SSF88946 5 105 3.77E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 20 177 4.4E-44 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 Gene3D G3DSA:1.10.1740.10 5 107 3.8E-21 T 23-04-2016 NIAKO_RS03485 91d21e4208b42025793c99bf4c327bea 182 Pfam PF04542 Sigma-70 region 2 25 91 2.6E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 SUPERFAMILY SSF49452 23 98 8.83E-9 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 Gene3D G3DSA:2.60.40.1120 29 121 3.5E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 Pfam PF14905 Outer membrane protein beta-barrel family 385 774 2.7E-64 T 23-04-2016 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 99 1.7E-10 T 23-04-2016 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 Gene3D G3DSA:2.170.130.10 122 226 6.7E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 SUPERFAMILY SSF56935 118 765 1.03E-38 T 23-04-2016 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 Gene3D G3DSA:2.40.170.20 227 703 1.5E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13820 0e8a394cd740df0a090586b71b3cc5c2 811 PANTHER PTHR30069 12 260 2.8E-13 T 23-04-2016 NIAKO_RS15335 258f29acb9b48bfd3e6a2b11d61e5af1 365 PANTHER PTHR10009 31 364 1.5E-22 T 23-04-2016 IPR017996 Major royal jelly protein/Protein yellow NIAKO_RS15335 258f29acb9b48bfd3e6a2b11d61e5af1 365 SUPERFAMILY SSF63829 224 341 2.88E-27 T 23-04-2016 NIAKO_RS15335 258f29acb9b48bfd3e6a2b11d61e5af1 365 SUPERFAMILY SSF63829 19 197 2.88E-27 T 23-04-2016 NIAKO_RS15335 258f29acb9b48bfd3e6a2b11d61e5af1 365 Gene3D G3DSA:2.120.10.30 22 364 1.2E-91 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15335 258f29acb9b48bfd3e6a2b11d61e5af1 365 Pfam PF03022 Major royal jelly protein 101 347 1.0E-18 T 23-04-2016 IPR017996 Major royal jelly protein/Protein yellow NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 Gene3D G3DSA:1.10.10.10 32 101 3.2E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 PANTHER PTHR39515 1 140 2.3E-18 T 23-04-2016 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 9.0E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 9.0E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 9.0E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 9.0E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 SUPERFAMILY SSF46785 6 134 2.43E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 SMART SM00347 24 124 2.6E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 Pfam PF12802 MarR family 33 87 2.6E-11 T 23-04-2016 NIAKO_RS18215 478ccf3a2b62ad3e2a2d584335aab24d 141 Gene3D G3DSA:1.10.287.100 102 139 1.7E-10 T 23-04-2016 IPR013028 Transcription factor IIA, alpha subunit, N-terminal GO:0006367 NIAKO_RS21475 6105869e25d69d99fed43e09bbb744da 346 PANTHER PTHR31377 1 345 7.7E-133 T 23-04-2016 NIAKO_RS21475 6105869e25d69d99fed43e09bbb744da 346 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 11 344 7.9E-117 T 23-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 NIAKO_RS21475 6105869e25d69d99fed43e09bbb744da 346 Gene3D G3DSA:3.75.10.10 5 345 1.7E-129 T 23-04-2016 NIAKO_RS21475 6105869e25d69d99fed43e09bbb744da 346 PANTHER PTHR31377:SF0 1 345 7.7E-133 T 23-04-2016 NIAKO_RS21475 6105869e25d69d99fed43e09bbb744da 346 SUPERFAMILY SSF55909 3 345 1.05E-123 T 23-04-2016 NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 PANTHER PTHR12145:SF14 15 361 3.0E-51 T 23-04-2016 NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 PANTHER PTHR12145 15 361 3.0E-51 T 23-04-2016 NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 Pfam PF03663 Glycosyl hydrolase family 76 28 349 9.9E-42 T 23-04-2016 IPR005198 Glycoside hydrolase, family 76 KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 SUPERFAMILY SSF48208 43 300 3.03E-36 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 PIRSF PIRSF021505 5 359 2.8E-46 T 23-04-2016 IPR014512 Predicted O-glycosyl hydrolase NIAKO_RS24550 a9be9e635be673b6a6e110d236203bee 361 Gene3D G3DSA:1.50.10.10 30 264 4.5E-33 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Gene3D G3DSA:3.30.70.870 397 471 1.2E-22 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Gene3D G3DSA:3.30.230.10 475 609 4.6E-40 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SUPERFAMILY SSF50447 262 395 6.31E-21 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Pfam PF03764 Elongation factor G, domain IV 470 608 7.5E-32 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SUPERFAMILY SSF52540 5 278 4.07E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SMART SM00889 471 609 2.5E-50 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Gene3D G3DSA:2.40.30.10 296 396 5.2E-25 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SMART SM00838 611 698 4.5E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SUPERFAMILY SSF54980 393 470 6.47E-16 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Pfam PF14492 Elongation Factor G, domain II 395 467 4.8E-20 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 178 1.2E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115:SF98 11 176 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115:SF98 251 517 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115:SF98 540 702 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PRINTS PR00315 GTP-binding elongation factor signature 77 87 4.0E-6 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PRINTS PR00315 GTP-binding elongation factor signature 129 138 4.0E-6 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PRINTS PR00315 GTP-binding elongation factor signature 11 24 4.0E-6 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Gene3D G3DSA:3.40.50.300 5 283 8.1E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SUPERFAMILY SSF54980 612 702 1.01E-23 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115 11 176 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115 251 517 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 PANTHER PTHR23115 540 702 5.3E-195 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 SUPERFAMILY SSF54211 470 610 1.14E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Pfam PF00009 Elongation factor Tu GTP binding domain 9 277 4.5E-40 T 23-04-2016 NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Gene3D G3DSA:3.30.70.240 610 694 2.9E-25 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS12940 a07f9c7b39e0515e34d764e5e74f4559 711 Pfam PF00679 Elongation factor G C-terminus 612 696 1.1E-25 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS02930 d3373179dd342c2c9733ba9cbd71510e 163 PANTHER PTHR36440 1 159 1.4E-17 T 23-04-2016 NIAKO_RS02930 d3373179dd342c2c9733ba9cbd71510e 163 Pfam PF07883 Cupin domain 41 109 1.3E-14 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS02930 d3373179dd342c2c9733ba9cbd71510e 163 SUPERFAMILY SSF51182 20 134 3.37E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS02930 d3373179dd342c2c9733ba9cbd71510e 163 Gene3D G3DSA:2.60.120.10 11 159 2.1E-36 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02930 d3373179dd342c2c9733ba9cbd71510e 163 PANTHER PTHR36440:SF1 1 159 1.4E-17 T 23-04-2016 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 Gene3D G3DSA:3.30.230.10 2 202 5.1E-71 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PANTHER PTHR10457 1 384 2.0E-122 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 Pfam PF08544 GHMP kinases C terminal 280 358 1.1E-5 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00473 Galactokinase signature 24 42 7.3E-21 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00473 Galactokinase signature 105 123 7.3E-21 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00473 Galactokinase signature 262 276 7.3E-21 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00473 Galactokinase signature 85 96 7.3E-21 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 SUPERFAMILY SSF54211 2 196 1.21E-60 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PIRSF PIRSF000530 1 382 5.6E-111 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00959 Mevalonate kinase family signature 112 134 6.0E-39 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00959 Mevalonate kinase family signature 326 343 6.0E-39 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00959 Mevalonate kinase family signature 155 174 6.0E-39 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PRINTS PR00959 Mevalonate kinase family signature 22 46 6.0E-39 T 23-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 SUPERFAMILY SSF55060 199 380 8.39E-43 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 TIGRFAM TIGR00131 gal_kin: galactokinase 3 378 2.2E-98 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 Gene3D G3DSA:3.30.70.890 203 377 1.1E-48 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 Pfam PF00288 GHMP kinases N terminal domain 107 174 7.7E-15 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 PANTHER PTHR10457:SF6 1 384 2.0E-122 T 23-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 114 125 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 ProSitePatterns PS00106 Galactokinase signature. 24 35 - T 23-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS32890 2baf0d5126b8ca8555745374396d3980 385 Pfam PF10509 Galactokinase galactose-binding signature 8 55 6.2E-23 T 23-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 NIAKO_RS24875 78f8bfb2c383b3e5060dce3267983eff 239 PANTHER PTHR39200:SF1 1 237 7.7E-34 T 23-04-2016 NIAKO_RS24875 78f8bfb2c383b3e5060dce3267983eff 239 PANTHER PTHR39200 1 237 7.7E-34 T 23-04-2016 NIAKO_RS24875 78f8bfb2c383b3e5060dce3267983eff 239 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 41 223 7.6E-47 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Gene3D G3DSA:1.10.1780.10 1 146 6.2E-37 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Gene3D G3DSA:3.40.50.300 550 784 1.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SUPERFAMILY SSF52540 156 543 8.99E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Gene3D G3DSA:1.10.8.60 342 427 1.8E-37 T 23-04-2016 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Gene3D G3DSA:3.40.50.300 158 341 7.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PANTHER PTHR11638:SF18 1 868 0.0 T 23-04-2016 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SMART SM01086 772 861 1.8E-28 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PANTHER PTHR11638 1 868 0.0 T 23-04-2016 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Gene3D G3DSA:1.10.8.60 785 864 1.1E-26 T 23-04-2016 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 861 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SUPERFAMILY SSF81923 5 154 4.81E-33 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 595 766 1.5E-54 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 335 7.5E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 630 648 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SUPERFAMILY SSF52540 545 862 6.58E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 850 3.3E-22 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 143 1.6E-10 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.3E-8 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 663 4.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 618 4.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 707 721 4.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 674 692 4.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SMART SM00382 197 342 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04775 67a8ea8fcfc7cdd26503f081da0a5496 870 SMART SM00382 596 738 4.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 PANTHER PTHR30173 10 179 5.4E-31 T 23-04-2016 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 SUPERFAMILY SSF88946 4 100 3.18E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 171 2.2E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 Gene3D G3DSA:1.10.10.10 110 173 1.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 SUPERFAMILY SSF88659 108 172 5.23E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 Gene3D G3DSA:1.10.1740.10 5 101 3.5E-21 T 23-04-2016 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 Pfam PF04542 Sigma-70 region 2 21 88 1.2E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 PANTHER PTHR30173:SF21 10 179 5.4E-31 T 23-04-2016 NIAKO_RS36100 ee897d7450f786ccd04cc7081a6a5cc8 184 Pfam PF08281 Sigma-70, region 4 117 167 2.0E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 SUPERFAMILY SSF55874 81 243 7.99E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 SMART SM00387 136 246 1.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 PANTHER PTHR24423 12 247 2.0E-68 T 23-04-2016 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 SMART SM00388 24 92 1.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 SUPERFAMILY SSF47384 10 93 3.53E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 Pfam PF00512 His Kinase A (phospho-acceptor) domain 25 92 2.6E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 137 245 5.4E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 Gene3D G3DSA:3.30.565.10 77 244 4.9E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 Gene3D G3DSA:1.10.287.130 16 76 4.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 206 224 3.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 173 187 3.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 230 243 3.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09160 e6ab48212bd4b105fec853b64d076df8 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 201 3.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.5E-26 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.3E-6 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.3E-6 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.3E-6 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 Gene3D G3DSA:4.10.520.10 1 91 3.8E-26 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 PANTHER PTHR33175 1 85 9.6E-29 T 23-04-2016 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 SUPERFAMILY SSF47729 1 92 7.51E-24 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NIAKO_RS28520 152ec901d39dee7d5239890c94e4b6e2 106 SMART SM00411 1 90 1.4E-22 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS36135 ff0900bd4a6ec990b809047aec269141 262 Pfam PF12146 Serine aminopeptidase, S33 67 183 2.1E-17 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS36135 ff0900bd4a6ec990b809047aec269141 262 Gene3D G3DSA:3.40.50.1820 48 258 2.2E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36135 ff0900bd4a6ec990b809047aec269141 262 SUPERFAMILY SSF53474 19 260 8.53E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36135 ff0900bd4a6ec990b809047aec269141 262 PANTHER PTHR12277 2 262 7.1E-48 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1017 6.3E-244 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF56935 105 256 4.76E-83 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF56935 433 780 4.76E-83 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF56935 932 1017 4.76E-83 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF56935 314 402 4.76E-83 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF56935 852 895 4.76E-83 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Gene3D G3DSA:2.60.40.1120 30 114 6.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Pfam PF00593 TonB dependent receptor 609 1015 2.6E-16 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 209 239 2.9E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532 560 1015 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532 10 416 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532 504 535 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Pfam PF13715 CarboxypepD_reg-like domain 30 111 1.9E-12 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 SUPERFAMILY SSF49464 29 109 9.29E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Gene3D G3DSA:2.170.130.10 115 233 1.6E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532:SF57 560 1015 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532:SF57 10 416 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 PANTHER PTHR11532:SF57 504 535 3.7E-234 T 23-04-2016 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Gene3D G3DSA:2.40.170.20 323 789 5.0E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Gene3D G3DSA:2.40.170.20 860 1017 5.0E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Gene3D G3DSA:2.40.170.20 234 252 5.0E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17830 16bec81c0bf42d5dbe69f4ffdc7777b2 1017 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 233 7.3E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33180 afa3513c56ca10a82236d0daf906bce4 487 SUPERFAMILY SSF103365 91 470 3.01E-96 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS33180 afa3513c56ca10a82236d0daf906bce4 487 PANTHER PTHR11118 94 471 2.8E-129 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS33180 afa3513c56ca10a82236d0daf906bce4 487 Pfam PF01139 tRNA-splicing ligase RtcB 108 180 8.0E-14 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS33180 afa3513c56ca10a82236d0daf906bce4 487 Pfam PF01139 tRNA-splicing ligase RtcB 209 468 4.0E-65 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS33180 afa3513c56ca10a82236d0daf906bce4 487 PANTHER PTHR11118:SF3 94 471 2.8E-129 T 23-04-2016 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Pfam PF04851 Type III restriction enzyme, res subunit 14 88 1.6E-9 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:4.10.860.10 636 677 7.3E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.30.2060.10 159 231 1.1E-7 T 23-04-2016 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Pfam PF00271 Helicase conserved C-terminal domain 430 543 3.8E-19 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SMART SM00490 458 544 9.4E-18 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SMART SM00487 7 424 1.2E-23 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Pfam PF12344 Ultra-violet resistance protein B 550 590 1.5E-20 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 670 3.5E-290 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.40.50.300 423 574 1.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SUPERFAMILY SSF52540 457 579 1.6E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SUPERFAMILY SSF52540 35 80 1.6E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SUPERFAMILY SSF46600 633 675 7.72E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Pfam PF02151 UvrB/uvrC motif 638 673 3.4E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 673 40.47 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.40.50.300 3 87 1.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.40.50.300 119 152 1.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.40.50.300 386 407 8.6E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 Gene3D G3DSA:3.40.50.300 246 336 8.6E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 SUPERFAMILY SSF52540 3 413 1.55E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30945 565c8a76ba60006979e76c5c9f5e08af 679 PANTHER PTHR24029 1 679 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 Gene3D G3DSA:2.40.50.100 20 83 5.2E-30 T 23-04-2016 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 PANTHER PTHR15893 1 85 1.0E-41 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 85 1.0E-13 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 SUPERFAMILY SSF110324 2 82 4.88E-33 T 23-04-2016 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.417 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 8.9E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02830 18e4796f9e764fbaab47d9bfbcb2cc8f 85 Pfam PF01016 Ribosomal L27 protein 2 81 2.6E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 335 7.7E-45 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 154 1.1E-29 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 SUPERFAMILY SSF51735 1 180 3.4E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PIRSF PIRSF000114 1 343 6.9E-78 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 9.4E-23 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 9.4E-23 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 9.4E-23 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 9.4E-23 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 9.4E-23 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 Gene3D G3DSA:3.40.50.720 1 183 8.1E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 Gene3D G3DSA:1.10.1040.10 184 338 9.8E-37 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 PANTHER PTHR11728 1 335 1.7E-70 T 23-04-2016 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 SUPERFAMILY SSF48179 180 339 1.39E-35 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS33715 f5104176d146a47e7ed8780a9d23e73a 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031:SF249 276 290 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SUPERFAMILY SSF52540 396 603 3.24E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031 276 290 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Pfam PF17191 RecG wedge domain 14 169 9.7E-16 T 23-04-2016 IPR033454 RecG, wedge domain NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Gene3D G3DSA:3.40.50.300 269 458 3.4E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SUPERFAMILY SSF52540 192 458 2.42E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SUPERFAMILY SSF50249 11 170 4.4E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031 307 608 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Gene3D G3DSA:3.40.50.300 459 643 3.5E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Pfam PF00271 Helicase conserved C-terminal domain 478 594 1.4E-17 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031 632 697 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SMART SM00487 273 464 1.3E-35 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Gene3D G3DSA:2.40.50.140 53 146 1.4E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 34 671 5.6E-212 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031:SF249 632 697 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 PANTHER PTHR24031:SF249 307 608 8.1E-116 T 23-04-2016 NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SMART SM00490 343 417 0.61 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 SMART SM00490 513 595 1.9E-18 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS35945 9ff2bf81030486c23ae3376df6d01fca 706 Pfam PF00270 DEAD/DEAH box helicase 280 439 2.7E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 SUPERFAMILY SSF51161 158 312 2.47E-16 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 Gene3D G3DSA:2.160.10.10 137 310 8.6E-14 T 23-04-2016 NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 PANTHER PTHR22572 138 314 1.9E-30 T 23-04-2016 NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 TIGRFAM TIGR03991 alt_bact_glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 95 352 5.3E-93 T 23-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 Pfam PF13562 Sugar nucleotidyl transferase 7 75 9.9E-12 T 23-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type NIAKO_RS10695 3498e97c0ed290d7add662409bf0551c 355 PANTHER PTHR22572:SF99 138 314 1.9E-30 T 23-04-2016 NIAKO_RS31030 a7a028d2ba162fe99129bde08510381d 216 SUPERFAMILY SSF52833 41 202 1.45E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31030 a7a028d2ba162fe99129bde08510381d 216 PANTHER PTHR12151:SF0 35 202 7.9E-26 T 23-04-2016 NIAKO_RS31030 a7a028d2ba162fe99129bde08510381d 216 PANTHER PTHR12151 35 202 7.9E-26 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC NIAKO_RS31030 a7a028d2ba162fe99129bde08510381d 216 Gene3D G3DSA:3.40.30.10 14 203 8.6E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31030 a7a028d2ba162fe99129bde08510381d 216 Pfam PF02630 SCO1/SenC 38 182 2.9E-20 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC NIAKO_RS13800 bb183955d1219c166eeb7b3791b80af6 564 Pfam PF07980 SusD family 290 564 1.9E-52 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13800 bb183955d1219c166eeb7b3791b80af6 564 Pfam PF14322 Starch-binding associating with outer membrane 89 237 1.9E-16 T 23-04-2016 NIAKO_RS13800 bb183955d1219c166eeb7b3791b80af6 564 SUPERFAMILY SSF48452 19 564 7.71E-117 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13800 bb183955d1219c166eeb7b3791b80af6 564 Gene3D G3DSA:1.25.40.10 388 489 2.8E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13800 bb183955d1219c166eeb7b3791b80af6 564 Gene3D G3DSA:1.25.40.10 221 322 2.8E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08125 249cde9e2ece4e8fec7214fcbe1c754b 101 SUPERFAMILY SSF54909 1 91 1.82E-13 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS08125 249cde9e2ece4e8fec7214fcbe1c754b 101 Gene3D G3DSA:3.30.70.900 1 93 2.4E-12 T 23-04-2016 NIAKO_RS08125 249cde9e2ece4e8fec7214fcbe1c754b 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.1E-7 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00091 1131 1197 2.3E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00091 994 1063 1.2E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00091 720 785 45.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00387 1385 1509 6.4E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF55874 1334 1507 5.63E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.30.450.20 1125 1242 7.4E-31 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00086 1203 1245 1.9E-9 T 23-04-2016 IPR001610 PAC motif NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00086 914 950 410.0 T 23-04-2016 IPR001610 PAC motif NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00086 1070 1112 0.28 T 23-04-2016 IPR001610 PAC motif NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF47384 1261 1346 5.49E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF03705 CheR methyltransferase, all-alpha domain 216 263 2.1E-12 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.40.50.150 277 473 7.1E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:1.10.287.130 1268 1341 2.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.40.50.180 10 198 2.7E-58 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1278 1344 1.8E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00138 212 473 2.0E-67 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.30.450.20 832 948 1.6E-5 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PRINTS PR00996 Glutamate methyltransferase family signature 234 247 6.1E-22 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PRINTS PR00996 Glutamate methyltransferase family signature 347 363 6.1E-22 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PRINTS PR00996 Glutamate methyltransferase family signature 311 331 6.1E-22 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PRINTS PR00996 Glutamate methyltransferase family signature 432 455 6.1E-22 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PRINTS PR00996 Glutamate methyltransferase family signature 413 427 6.1E-22 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF01339 CheB methylesterase 18 192 1.2E-51 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF47757 214 280 4.18E-11 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF08447 PAS fold 1017 1105 2.9E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF08447 PAS fold 1155 1238 8.2E-20 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF01739 CheR methyltransferase, SAM binding domain 279 468 8.1E-50 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF52738 13 198 1.44E-52 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF55785 983 1110 3.84E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF55785 706 827 7.33E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1133 1251 6.2E-14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 990 1119 1.1E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PANTHER PTHR24422:SF6 104 838 1.1E-162 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 PANTHER PTHR24422 104 838 1.1E-162 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF13596 PAS domain 723 826 2.1E-21 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.30.565.10 1349 1510 9.5E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1387 1508 5.8E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.30.450.20 728 827 2.8E-5 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:1.10.155.10 214 267 3.1E-11 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SMART SM00388 1276 1345 5.8E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF55785 1137 1247 5.32E-26 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 Gene3D G3DSA:3.30.450.20 984 1121 5.3E-26 T 23-04-2016 NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF55785 885 959 3.22E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS29365 34a1d8d83c09b0770a09ecc895365893 1527 SUPERFAMILY SSF53335 278 472 1.11E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17755 92c7a7cd5e14860331580b82a09934b3 1053 Gene3D G3DSA:2.160.20.10 297 490 2.4E-7 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17755 92c7a7cd5e14860331580b82a09934b3 1053 Gene3D G3DSA:2.160.20.10 98 254 2.4E-7 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17755 92c7a7cd5e14860331580b82a09934b3 1053 SUPERFAMILY SSF51126 292 489 3.45E-10 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17755 92c7a7cd5e14860331580b82a09934b3 1053 SUPERFAMILY SSF51126 86 176 3.45E-10 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82866 830 1066 4.97E-43 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82866 307 508 3.14E-39 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82714 741 827 1.06E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PANTHER PTHR32063:SF16 896 1066 0.0 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PANTHER PTHR32063:SF16 7 879 0.0 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.2E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PANTHER PTHR32063 896 1066 0.0 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 PANTHER PTHR32063 7 879 0.0 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82693 283 338 4.45E-10 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82693 139 185 4.45E-10 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Pfam PF00873 AcrB/AcrD/AcrF family 15 1060 3.0E-170 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:1.20.1640.10 301 518 4.7E-47 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:1.10.3850.10 834 1063 2.3E-67 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:3.30.2090.10 186 269 1.2E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:3.30.2090.10 740 827 3.8E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82714 187 269 7.32E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:3.30.70.1430 584 692 5.1E-13 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82693 45 139 8.72E-22 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 Gene3D G3DSA:3.30.70.1430 45 144 2.3E-22 T 23-04-2016 NIAKO_RS04095 6111c0b5b65d4fe878cb9a1693903ae1 1068 SUPERFAMILY SSF82693 579 694 4.87E-13 T 23-04-2016 NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 PIRSF PIRSF028846 39 472 2.3E-183 T 23-04-2016 IPR008313 Meiotically up-regulated gene 157 protein NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 PANTHER PTHR31047:SF0 27 471 2.5E-213 T 23-04-2016 NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 SMART SM01149 61 462 4.1E-246 T 23-04-2016 IPR008313 Meiotically up-regulated gene 157 protein NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 Pfam PF06824 Protein of unknown function (DUF1237) 62 460 7.7E-163 T 23-04-2016 IPR008313 Meiotically up-regulated gene 157 protein NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 SUPERFAMILY SSF48208 31 470 2.24E-175 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 Gene3D G3DSA:1.50.10.10 46 471 5.7E-182 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS24545 b033a3a8dbedbabd61a0afd207d9d01e 472 PANTHER PTHR31047 27 471 2.5E-213 T 23-04-2016 NIAKO_RS05200 068107d2cf48c9bec1733d165c11a3df 178 PANTHER PTHR34720 11 178 6.7E-34 T 23-04-2016 NIAKO_RS05200 068107d2cf48c9bec1733d165c11a3df 178 Pfam PF07484 Phage Tail Collar Domain 8 61 7.7E-27 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS05200 068107d2cf48c9bec1733d165c11a3df 178 Gene3D G3DSA:3.90.1340.10 5 67 8.5E-28 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS05200 068107d2cf48c9bec1733d165c11a3df 178 SUPERFAMILY SSF88874 6 172 2.88E-37 T 23-04-2016 NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 SUPERFAMILY SSF111384 26 169 5.36E-19 T 23-04-2016 IPR024930 Skp domain NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 Gene3D G3DSA:3.30.910.20 16 67 7.4E-20 T 23-04-2016 NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 Gene3D G3DSA:3.30.910.20 106 169 7.4E-20 T 23-04-2016 NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 Pfam PF03938 Outer membrane protein (OmpH-like) 14 168 2.8E-28 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 SMART SM00935 13 169 4.0E-20 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS10865 07fb28b015f08af9078469f8ad750894 192 PANTHER PTHR35089 2 175 4.4E-12 T 23-04-2016 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 PANTHER PTHR11647:SF4 1 443 1.2E-213 T 23-04-2016 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 TIGRFAM TIGR03178 allantoinase: allantoinase 3 444 5.0E-164 T 23-04-2016 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698|UniPathway: UPA00395 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 SUPERFAMILY SSF51338 1 54 8.81E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 SUPERFAMILY SSF51338 374 436 8.81E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 PANTHER PTHR11647 1 443 1.2E-213 T 23-04-2016 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 Gene3D G3DSA:3.20.20.140 69 395 9.3E-126 T 23-04-2016 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 Pfam PF01979 Amidohydrolase family 51 427 5.0E-34 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 SUPERFAMILY SSF51556 55 374 2.81E-93 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 ProSitePatterns PS00482 Dihydroorotase signature 1. 58 66 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS02165 5789fa1620fd49c22fa02a75bbef5319 445 Gene3D G3DSA:2.30.40.10 10 68 3.2E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 Gene3D G3DSA:2.115.10.20 44 356 4.1E-76 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 SUPERFAMILY SSF75005 44 356 4.28E-60 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 PANTHER PTHR22925:SF30 50 203 3.1E-93 T 23-04-2016 NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 PANTHER PTHR22925:SF30 223 356 3.1E-93 T 23-04-2016 NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 Pfam PF04616 Glycosyl hydrolases family 43 115 355 4.7E-27 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 PANTHER PTHR22925 50 203 3.1E-93 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13875 b442b43c1af1438cfe5e2c0f253cc9c0 363 PANTHER PTHR22925 223 356 3.1E-93 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PANTHER PTHR11958 114 495 3.7E-144 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 276 295 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 376 402 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 411 430 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 229 251 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 311 330 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 438 458 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 4.8E-28 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 PANTHER PTHR11958:SF26 114 495 3.7E-144 T 23-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 SUPERFAMILY SSF118215 115 485 2.48E-107 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 Gene3D G3DSA:1.10.3860.10 1 24 3.2E-117 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 Gene3D G3DSA:1.10.3860.10 109 488 3.2E-117 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS01465 552cc1cc4100360c3cc826a40f42abd5 502 Pfam PF00375 Sodium:dicarboxylate symporter family 6 484 2.4E-106 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 983 993 3.4E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 3.4E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SUPERFAMILY SSF55874 871 1036 4.98E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:1.10.287.130 809 876 3.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:3.30.565.10 883 1037 6.5E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SUPERFAMILY SSF47384 806 879 1.06E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07494 Two component regulator propeller 510 532 7.5E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07494 Two component regulator propeller 285 306 5.3E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07494 Two component regulator propeller 20 43 0.0033 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07494 Two component regulator propeller 330 353 1.1E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07494 Two component regulator propeller 67 88 8.8E-6 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF00512 His Kinase A (phospho-acceptor) domain 816 876 1.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SMART SM00388 815 881 9.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 928 1036 2.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423 325 467 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423 512 584 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423 630 672 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423 798 1037 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Pfam PF07495 Y_Y_Y domain 688 749 1.1E-12 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SUPERFAMILY SSF50998 79 87 1.96E-14 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SUPERFAMILY SSF50998 127 445 1.96E-14 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SMART SM00387 927 1038 4.5E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:2.120.10.30 287 358 5.7E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:2.120.10.30 468 541 3.5E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:2.120.10.30 69 243 9.2E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:2.120.10.30 542 621 5.5E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 Gene3D G3DSA:2.120.10.30 359 448 6.1E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423:SF486 325 467 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423:SF486 512 584 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423:SF486 630 672 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 PANTHER PTHR24423:SF486 798 1037 9.9E-60 T 23-04-2016 NIAKO_RS18840 3bbb37268b33cdcea8e9a552ff9f1344 1053 SUPERFAMILY SSF63829 347 561 8.5E-17 T 23-04-2016 NIAKO_RS31650 12227b9cc5c3a7d2da77460f2d47c05b 77 Gene3D G3DSA:3.30.1360.20 2 76 1.2E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NIAKO_RS31650 12227b9cc5c3a7d2da77460f2d47c05b 77 PANTHER PTHR12599 2 77 2.0E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NIAKO_RS31650 12227b9cc5c3a7d2da77460f2d47c05b 77 SUPERFAMILY SSF55248 2 76 1.57E-28 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NIAKO_RS31650 12227b9cc5c3a7d2da77460f2d47c05b 77 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 2 75 2.7E-26 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 637 36.953 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PANTHER PTHR19375:SF173 2 638 0.0 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 3.9E-295 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.30.30.30 53 104 3.6E-22 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 463 479 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 328 344 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 382 401 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 136 156 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 196 206 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PRINTS PR00301 70kDa heat shock protein signature 359 379 6.0E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.30.420.40 4 52 2.0E-64 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.30.420.40 117 189 2.0E-64 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 PANTHER PTHR19375 2 638 0.0 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:1.20.1270.10 527 597 4.3E-23 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 SUPERFAMILY SSF100920 378 534 5.62E-57 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 SUPERFAMILY SSF53067 185 375 6.17E-66 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:2.60.34.10 384 526 1.4E-65 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 SUPERFAMILY SSF53067 4 182 1.76E-66 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Pfam PF00012 Hsp70 protein 4 597 1.5E-262 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.90.640.10 224 309 3.9E-30 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.30.420.40 313 355 1.5E-38 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 Gene3D G3DSA:3.30.420.40 190 223 1.5E-38 T 23-04-2016 NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site NIAKO_RS10340 ebbf7e501311cfb87b5265252a526733 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site NIAKO_RS28105 57c587afc315776f60a93beb6fc8c97b 377 ProSitePatterns PS01348 MraY family signature 2. 149 160 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS28105 57c587afc315776f60a93beb6fc8c97b 377 PANTHER PTHR22926:SF3 1 358 3.4E-80 T 23-04-2016 NIAKO_RS28105 57c587afc315776f60a93beb6fc8c97b 377 Pfam PF00953 Glycosyl transferase family 4 75 228 2.6E-36 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS28105 57c587afc315776f60a93beb6fc8c97b 377 PANTHER PTHR22926 1 358 3.4E-80 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 269 290 200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 330 351 410.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 359 381 2200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 242 268 4600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 434 462 3800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SMART SM00710 303 324 110.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 Pfam PF00295 Glycosyl hydrolases family 28 167 385 1.2E-27 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 Pfam PF12708 Pectate lyase superfamily protein 41 166 3.9E-8 T 23-04-2016 IPR024535 Pectate lyase superfamily protein NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 PANTHER PTHR31339:SF0 198 444 2.2E-120 T 23-04-2016 NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 PANTHER PTHR31339:SF0 41 153 2.2E-120 T 23-04-2016 NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 Gene3D G3DSA:2.160.20.10 205 511 7.5E-114 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 Gene3D G3DSA:2.160.20.10 17 158 7.5E-114 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 SUPERFAMILY SSF51126 32 444 6.96E-92 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 PANTHER PTHR31339 198 444 2.2E-120 T 23-04-2016 NIAKO_RS35350 6afdb84aa033b8a9b222ece4b1afc963 532 PANTHER PTHR31339 41 153 2.2E-120 T 23-04-2016 NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 SUPERFAMILY SSF49299 504 578 5.62E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 SUPERFAMILY SSF49299 418 491 1.83E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 SMART SM00089 417 495 0.0074 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 SMART SM00089 499 581 6.1E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 Gene3D G3DSA:2.60.40.670 417 492 2.2E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 Gene3D G3DSA:2.60.40.670 508 579 1.2E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 Pfam PF13585 C-terminal domain of CHU protein family 584 668 3.7E-19 T 23-04-2016 NIAKO_RS05500 0f1dc91107ed52c641b56189a98820cd 673 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 585 654 1.8E-12 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS13920 e9b66e29dbe40b94e52babdd4f5659d5 311 SUPERFAMILY SSF89562 72 242 8.76E-18 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS13920 e9b66e29dbe40b94e52babdd4f5659d5 311 Gene3D G3DSA:3.50.30.40 72 244 1.6E-29 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS13920 e9b66e29dbe40b94e52babdd4f5659d5 311 Pfam PF03737 Demethylmenaquinone methyltransferase 73 234 1.3E-14 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 PANTHER PTHR32089:SF1 190 494 8.0E-82 T 23-04-2016 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 SMART SM00283 258 491 7.0E-56 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 489 1.1E-10 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 402 3.1E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 SUPERFAMILY SSF58104 239 497 1.28E-57 T 23-04-2016 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 Gene3D G3DSA:1.10.287.950 266 463 1.3E-41 T 23-04-2016 NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 167 3.3E-12 T 23-04-2016 IPR024478 4HB MCP domain NIAKO_RS36285 7fe41b4286bd9ecea08ada28f3fd1b53 549 PANTHER PTHR32089 190 494 8.0E-82 T 23-04-2016 NIAKO_RS12255 446443ef3ec1c8860e719afd1fdf97ca 212 Pfam PF12099 Protein of unknown function (DUF3575) 40 151 3.9E-6 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 SUPERFAMILY SSF102735 4 136 1.22E-23 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 Gene3D G3DSA:3.30.70.1050 4 124 4.3E-23 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 Pfam PF05697 Bacterial trigger factor protein (TF) 4 151 1.8E-30 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 PANTHER PTHR30560 2 450 1.5E-34 T 23-04-2016 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 TIGRFAM TIGR00115 tig: trigger factor 13 431 8.8E-62 T 23-04-2016 IPR005215 Trigger factor GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 PIRSF PIRSF003095 2 455 2.8E-45 T 23-04-2016 IPR005215 Trigger factor GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 Gene3D G3DSA:1.10.3120.10 210 385 1.1E-16 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 SUPERFAMILY SSF109998 266 449 3.43E-21 T 23-04-2016 IPR027304 Trigger factor/SurA domain NIAKO_RS27605 6d665e5a428f2312238741126ffa5da6 459 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 284 388 1.4E-5 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 1.1E-87 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 2.1E-80 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 PIRSF PIRSF001461 1 217 2.3E-90 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 PANTHER PTHR11749 1 215 8.7E-114 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 SUPERFAMILY SSF51366 2 215 1.2E-71 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS01705 f321bf6819a30ef47efc5b005e9c47e4 217 Gene3D G3DSA:3.20.20.70 2 214 2.2E-91 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 SUPERFAMILY SSF49303 549 633 3.6E-7 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 PANTHER PTHR10066:SF72 50 858 2.8E-130 T 23-04-2016 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 360 8.3E-7 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 PRINTS PR00132 Glycosyl hydrolase family 2 signature 311 325 8.3E-7 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Gene3D G3DSA:3.20.20.80 298 555 2.5E-53 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 SUPERFAMILY SSF51445 296 554 3.61E-51 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Gene3D G3DSA:2.60.40.320 189 297 7.8E-19 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Gene3D G3DSA:2.60.120.260 14 188 3.7E-36 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Pfam PF00703 Glycosyl hydrolases family 2 223 299 3.2E-10 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 SUPERFAMILY SSF49303 211 299 3.74E-10 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Gene3D G3DSA:2.60.40.320 556 625 2.5E-7 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Pfam PF02929 Beta galactosidase small chain 725 875 5.4E-7 T 23-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Gene3D G3DSA:2.70.98.10 742 874 4.7E-8 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 64 197 1.9E-19 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 SUPERFAMILY SSF74650 670 873 1.04E-13 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 PANTHER PTHR10066 50 858 2.8E-130 T 23-04-2016 NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 SUPERFAMILY SSF49785 23 197 1.7E-34 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17730 540ee9651fb803491e9df613b799356b 935 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 302 520 3.5E-25 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS22140 f90ed945eee7d15548e716dc76c4da39 402 SUPERFAMILY SSF63829 17 275 2.29E-11 T 23-04-2016 NIAKO_RS22140 f90ed945eee7d15548e716dc76c4da39 402 Gene3D G3DSA:2.120.10.30 189 280 3.5E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS22140 f90ed945eee7d15548e716dc76c4da39 402 Gene3D G3DSA:2.120.10.30 84 117 3.5E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS22140 f90ed945eee7d15548e716dc76c4da39 402 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 322 402 1.1E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Pfam PF13715 CarboxypepD_reg-like domain 159 241 3.0E-12 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF56935 1099 1136 8.79E-50 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF56935 237 406 8.79E-50 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF56935 1013 1056 8.79E-50 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF56935 468 555 8.79E-50 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF56935 592 936 8.79E-50 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 SUPERFAMILY SSF49464 157 238 3.79E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Gene3D G3DSA:2.60.40.1120 158 241 3.1E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Gene3D G3DSA:2.40.170.20 1010 1054 2.9E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Gene3D G3DSA:2.40.170.20 476 938 2.9E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 359 388 1.7E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 157 1175 1.4E-164 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Gene3D G3DSA:2.170.130.10 242 385 1.0E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532:SF57 668 946 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532:SF57 334 560 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532:SF57 139 312 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532:SF57 969 1174 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532 668 946 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532 334 560 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532 139 312 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 PANTHER PTHR11532 969 1174 6.1E-131 T 23-04-2016 NIAKO_RS11060 80180f3c66dabb86dc48c0b6fec46940 1176 Pfam PF07715 TonB-dependent Receptor Plug Domain 251 382 8.7E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06330 e7c4275363f8c85afd4cf29f8e054aa8 849 Pfam PF13715 CarboxypepD_reg-like domain 30 107 4.6E-13 T 23-04-2016 NIAKO_RS06330 e7c4275363f8c85afd4cf29f8e054aa8 849 Gene3D G3DSA:2.60.40.1120 30 97 1.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06330 e7c4275363f8c85afd4cf29f8e054aa8 849 SUPERFAMILY SSF49464 28 103 1.44E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 Pfam PF00348 Polyprenyl synthetase 29 271 6.7E-62 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 93 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 PANTHER PTHR12001 5 320 9.1E-86 T 23-04-2016 IPR017446 Polyprenyl synthetase-related NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 Gene3D G3DSA:1.10.600.10 6 319 1.0E-87 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 SUPERFAMILY SSF48576 6 320 5.04E-79 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS25125 70b87f614089a68937c5d7f66d25f415 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 SUPERFAMILY SSF54292 2 79 1.57E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 61 1.1E-6 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 PANTHER PTHR11908:SF66 1 138 9.3E-32 T 23-04-2016 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 Gene3D G3DSA:3.10.20.30 3 76 6.4E-26 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 Gene3D G3DSA:1.10.150.120 77 155 3.2E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 SUPERFAMILY SSF47741 82 154 1.27E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 Pfam PF01799 [2Fe-2S] binding domain 75 149 3.7E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS28890 ab5c5b8bf453571e5e34d958cd2221cd 156 PANTHER PTHR11908 1 138 9.3E-32 T 23-04-2016 NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 Pfam PF16344 Domain of unknown function (DUF4974) 288 387 2.0E-23 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 PANTHER PTHR30273:SF2 179 390 7.1E-68 T 23-04-2016 NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 PANTHER PTHR30273:SF2 4 113 7.1E-68 T 23-04-2016 NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 PANTHER PTHR30273 179 390 7.1E-68 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 PANTHER PTHR30273 4 113 7.1E-68 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20145 84af785e14513700254d026098ae2aeb 390 Pfam PF04773 FecR protein 177 277 1.7E-13 T 23-04-2016 IPR006860 FecR protein NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 Pfam PF16344 Domain of unknown function (DUF4974) 303 400 7.6E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 Pfam PF04773 FecR protein 193 293 4.5E-15 T 23-04-2016 IPR006860 FecR protein NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 PANTHER PTHR30273:SF2 195 406 2.7E-65 T 23-04-2016 NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 PANTHER PTHR30273:SF2 2 127 2.7E-65 T 23-04-2016 NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 PANTHER PTHR30273 195 406 2.7E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS18030 419f0d86956f7cab122e29305b88b77c 406 PANTHER PTHR30273 2 127 2.7E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 PANTHER PTHR24220 6 227 6.7E-123 T 23-04-2016 NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 Pfam PF00005 ABC transporter 24 172 1.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 SUPERFAMILY SSF52540 4 224 3.29E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 Gene3D G3DSA:3.40.50.300 2 223 1.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 PANTHER PTHR24220:SF578 6 227 6.7E-123 T 23-04-2016 NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS26930 cfaf9d4cca6e380abaff5b93d88f737c 233 SMART SM00382 33 220 3.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 Pfam PF13102 Phage integrase SAM-like domain 18 177 4.4E-18 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 PANTHER PTHR30349:SF26 112 405 1.4E-88 T 23-04-2016 NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 SUPERFAMILY SSF56349 128 394 5.3E-43 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 Gene3D G3DSA:1.10.443.10 227 393 2.5E-30 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 Pfam PF00589 Phage integrase family 251 390 8.7E-16 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS05405 6e92b2144f97aca7163719ad6cf7c88a 406 PANTHER PTHR30349 112 405 1.4E-88 T 23-04-2016 NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 Pfam PF00578 AhpC/TSA family 333 446 3.6E-14 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 ProSitePatterns PS00194 Thioredoxin family active site. 355 373 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 PANTHER PTHR10681:SF68 299 448 3.3E-14 T 23-04-2016 NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 Gene3D G3DSA:3.40.30.10 9 29 2.8E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 Gene3D G3DSA:3.40.30.10 324 468 2.8E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 SUPERFAMILY SSF52833 326 467 1.23E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36810 8a1c20e8e2e887997695a81fc96dd86f 471 PANTHER PTHR10681 299 448 3.3E-14 T 23-04-2016 NIAKO_RS30710 375600f05aec10af90b98f8654c1aeb3 405 SUPERFAMILY SSF53383 2 336 2.13E-84 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS30710 375600f05aec10af90b98f8654c1aeb3 405 Gene3D G3DSA:3.40.640.10 9 249 7.2E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS30710 375600f05aec10af90b98f8654c1aeb3 405 PANTHER PTHR30244:SF13 40 397 1.0E-85 T 23-04-2016 NIAKO_RS30710 375600f05aec10af90b98f8654c1aeb3 405 PANTHER PTHR30244 40 397 1.0E-85 T 23-04-2016 NIAKO_RS30710 375600f05aec10af90b98f8654c1aeb3 405 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 312 4.6E-84 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 Gene3D G3DSA:3.30.70.260 212 294 2.4E-17 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 Gene3D G3DSA:3.40.190.10 114 189 2.7E-25 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 PANTHER PTHR21022:SF0 25 292 7.6E-76 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 Gene3D G3DSA:3.40.190.10 25 113 1.5E-24 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 SUPERFAMILY SSF55021 214 292 3.09E-16 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 PANTHER PTHR21022 25 292 7.6E-76 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 Pfam PF00800 Prephenate dehydratase 27 202 1.6E-53 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 SUPERFAMILY SSF53850 26 206 2.82E-52 T 23-04-2016 NIAKO_RS22130 d6e81efdd7094891718af990b3def254 299 PIRSF PIRSF001500 4 296 8.3E-64 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 NIAKO_RS16165 785fd3252a20fc24661692a241cd323d 255 Pfam PF07635 Planctomycete cytochrome C 88 137 1.5E-6 T 23-04-2016 IPR011429 Cytochrome C, Planctomycete NIAKO_RS16165 785fd3252a20fc24661692a241cd323d 255 Gene3D G3DSA:1.10.760.10 183 251 0.001 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS23865 2cc6f2a81ac574aa71ff0babe5f38e13 206 SUPERFAMILY SSF51206 20 133 3.54E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS23865 2cc6f2a81ac574aa71ff0babe5f38e13 206 Gene3D G3DSA:2.60.120.10 14 169 4.3E-35 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS23865 2cc6f2a81ac574aa71ff0babe5f38e13 206 PANTHER PTHR24567 26 206 1.2E-33 T 23-04-2016 NIAKO_RS23865 2cc6f2a81ac574aa71ff0babe5f38e13 206 Pfam PF00027 Cyclic nucleotide-binding domain 43 128 5.9E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS23865 2cc6f2a81ac574aa71ff0babe5f38e13 206 PANTHER PTHR24567:SF33 26 206 1.2E-33 T 23-04-2016 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 PANTHER PTHR20861 7 76 1.1E-72 T 23-04-2016 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 PANTHER PTHR20861 93 296 1.1E-72 T 23-04-2016 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Pfam PF08544 GHMP kinases C terminal 248 295 1.7E-7 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Pfam PF00288 GHMP kinases N terminal domain 127 170 2.5E-6 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Gene3D G3DSA:3.30.230.10 15 63 1.0E-43 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Gene3D G3DSA:3.30.230.10 100 198 1.0E-43 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 SUPERFAMILY SSF54211 14 58 3.26E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 SUPERFAMILY SSF54211 90 196 3.26E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 PIRSF PIRSF010376 11 302 2.1E-72 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 SUPERFAMILY SSF55060 204 295 1.21E-19 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 PANTHER PTHR20861:SF2 7 76 1.1E-72 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 PANTHER PTHR20861:SF2 93 296 1.1E-72 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Gene3D G3DSA:3.30.70.890 203 296 2.1E-23 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 104 295 1.0E-41 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS20345 3ad31cb6616dc4cf07e4c4e690a67dd1 312 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 311 27.079 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Gene3D G3DSA:3.40.50.300 96 296 1.4E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 SUPERFAMILY SSF47446 326 427 4.91E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 425 6.6E-182 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 SMART SM00382 98 246 6.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 PANTHER PTHR11564:SF7 1 430 1.7E-242 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 435 33.585 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Gene3D G3DSA:1.20.120.140 2 89 9.6E-32 T 23-04-2016 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Pfam PF02978 Signal peptide binding domain 326 423 7.0E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Gene3D G3DSA:1.10.260.30 326 428 6.0E-36 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 SMART SM00963 1 86 3.3E-31 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Pfam PF00448 SRP54-type protein, GTPase domain 99 295 5.6E-73 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 SMART SM00962 99 295 8.8E-110 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 SUPERFAMILY SSF52540 42 353 1.54E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 PANTHER PTHR11564 1 430 1.7E-242 T 23-04-2016 NIAKO_RS34630 dcbde5c4d91a25dcc00b092e2ac20e86 438 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-19 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NIAKO_RS04015 2f936937212790be6e23fdcf2adce74d 420 Pfam PF05572 Pregnancy-associated plasma protein-A 176 320 5.9E-19 T 23-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 NIAKO_RS04015 2f936937212790be6e23fdcf2adce74d 420 SUPERFAMILY SSF55486 164 305 1.06E-9 T 23-04-2016 NIAKO_RS04015 2f936937212790be6e23fdcf2adce74d 420 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 346 420 1.4E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS04015 2f936937212790be6e23fdcf2adce74d 420 PANTHER PTHR19325:SF359 185 316 1.2E-23 T 23-04-2016 NIAKO_RS04015 2f936937212790be6e23fdcf2adce74d 420 PANTHER PTHR19325 185 316 1.2E-23 T 23-04-2016 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 1.5E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.5E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 1.5E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 1.5E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 306 39.471 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PANTHER PTHR11405:SF16 1 307 2.2E-127 T 23-04-2016 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 149 6.2E-36 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 303 1.2E-94 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.7E-24 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 Gene3D G3DSA:3.40.50.1370 148 291 8.1E-44 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PANTHER PTHR11405 1 307 2.2E-127 T 23-04-2016 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 7.0E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 Gene3D G3DSA:3.40.50.1370 6 147 2.1E-48 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 SUPERFAMILY SSF53671 2 307 1.96E-93 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS05745 100fcf13a4f7894f5802ed8ec419b8a2 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 Pfam PF08281 Sigma-70, region 4 121 172 1.3E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 PANTHER PTHR30173 1 176 2.8E-33 T 23-04-2016 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 SUPERFAMILY SSF88946 2 100 2.55E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 Gene3D G3DSA:1.10.1740.10 2 105 9.3E-30 T 23-04-2016 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 Pfam PF04542 Sigma-70 region 2 24 89 5.0E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 SUPERFAMILY SSF88659 118 176 2.06E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 175 5.3E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33880 2803682c350d7918a5bb01db2afa8378 179 Gene3D G3DSA:1.10.10.10 121 175 1.6E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.1E-8 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 4.1E-8 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.1E-8 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 4.1E-8 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.1E-8 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 SUPERFAMILY SSF103473 247 419 2.22E-71 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 SUPERFAMILY SSF103473 479 507 2.22E-71 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 SUPERFAMILY SSF103473 5 196 2.22E-71 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 Gene3D G3DSA:1.20.1250.20 7 189 2.9E-35 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PANTHER PTHR23501:SF69 3 501 1.9E-141 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 500 1.0E-124 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 Pfam PF07690 Major Facilitator Superfamily 16 409 8.4E-56 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 PANTHER PTHR23501 3 501 1.9E-141 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 Gene3D G3DSA:1.20.1250.20 480 506 3.8E-17 T 23-04-2016 NIAKO_RS32260 96d38db7b53884840b2d9bd7f9c1825b 515 Gene3D G3DSA:1.20.1250.20 262 420 3.8E-17 T 23-04-2016 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 SUPERFAMILY SSF51569 3 287 9.0E-76 T 23-04-2016 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PIRSF PIRSF001365 1 298 1.1E-68 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PANTHER PTHR12128 1 287 1.7E-69 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.9E-12 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 3.9E-12 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.9E-12 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 Pfam PF00701 Dihydrodipicolinate synthetase family 4 287 4.6E-54 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 PANTHER PTHR12128:SF15 1 287 1.7E-69 T 23-04-2016 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 Gene3D G3DSA:3.20.20.70 3 287 3.0E-81 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS25855 72f87362f052638693892f9fdd57cf79 302 SMART SM01130 2 288 2.7E-76 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 PANTHER PTHR10516 23 143 9.7E-59 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 SUPERFAMILY SSF54534 7 143 1.47E-52 T 23-04-2016 NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 Gene3D G3DSA:3.10.50.40 10 143 3.0E-53 T 23-04-2016 NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 9 46 6.4E-11 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 PANTHER PTHR10516:SF320 23 143 9.7E-59 T 23-04-2016 NIAKO_RS10000 e89e81a36851286fff83c7565deb5745 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 55 141 2.3E-27 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 Gene3D G3DSA:2.60.40.1120 23 111 4.5E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 SUPERFAMILY SSF49464 23 108 3.92E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 PANTHER PTHR11532 4 148 6.0E-12 T 23-04-2016 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 PANTHER PTHR11532:SF57 4 148 6.0E-12 T 23-04-2016 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 215 6.0E-6 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 Gene3D G3DSA:2.170.130.10 120 219 6.4E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 Pfam PF13715 CarboxypepD_reg-like domain 23 107 3.1E-15 T 23-04-2016 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 SUPERFAMILY SSF56935 94 738 6.72E-40 T 23-04-2016 NIAKO_RS34030 f6cc548690173150f0f30abe8399b5a3 756 Gene3D G3DSA:2.40.170.20 285 721 3.0E-15 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 189 4.9E-53 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 PANTHER PTHR12039 1 190 2.8E-45 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 SUPERFAMILY SSF52374 1 189 1.38E-50 T 23-04-2016 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 Pfam PF01467 Cytidylyltransferase-like 5 163 2.5E-24 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 Gene3D G3DSA:3.40.50.620 1 189 8.6E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 7.4E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS31175 4ba1b00aec34f8d5e566d8a5fa4b689c 190 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 190 28.637 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS09400 5f9696688662843e765b8d09d316ec93 229 Gene3D G3DSA:3.90.550.10 2 96 8.8E-11 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS09400 5f9696688662843e765b8d09d316ec93 229 PANTHER PTHR10859 1 80 9.9E-16 T 23-04-2016 NIAKO_RS09400 5f9696688662843e765b8d09d316ec93 229 Pfam PF00535 Glycosyl transferase family 2 13 84 6.7E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS09400 5f9696688662843e765b8d09d316ec93 229 PANTHER PTHR10859:SF99 1 80 9.9E-16 T 23-04-2016 NIAKO_RS09400 5f9696688662843e765b8d09d316ec93 229 SUPERFAMILY SSF53448 2 124 7.42E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS17210 017823cc115a79f28b7202579b824ab1 610 SUPERFAMILY SSF48452 21 610 2.78E-107 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17210 017823cc115a79f28b7202579b824ab1 610 Pfam PF14322 Starch-binding associating with outer membrane 24 221 9.9E-13 T 23-04-2016 NIAKO_RS17210 017823cc115a79f28b7202579b824ab1 610 Gene3D G3DSA:1.25.40.10 201 336 5.0E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17210 017823cc115a79f28b7202579b824ab1 610 Gene3D G3DSA:1.25.40.10 436 531 5.0E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17210 017823cc115a79f28b7202579b824ab1 610 Pfam PF07980 SusD family 318 610 5.6E-52 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 13 389 5.6E-78 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 16 160 1.2E-36 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 Gene3D G3DSA:3.40.50.720 167 306 1.5E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 103 126 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 179 304 1.8E-26 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 PANTHER PTHR13812:SF18 4 338 2.4E-66 T 23-04-2016 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 SUPERFAMILY SSF69742 11 162 1.2E-36 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 PIRSF PIRSF000445 10 412 2.9E-97 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 PANTHER PTHR13812 4 338 2.4E-66 T 23-04-2016 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 SUPERFAMILY SSF51735 165 311 7.09E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 404 1.2E-5 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28165 f7780b3462918df82a7bfb0261ef895b 412 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 11 408 21.931 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 PANTHER PTHR24423:SF487 7 162 1.6E-53 T 23-04-2016 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 PANTHER PTHR24423 7 162 1.6E-53 T 23-04-2016 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 Gene3D G3DSA:1.10.10.60 152 207 1.4E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 SUPERFAMILY SSF46689 207 256 4.48E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 Gene3D G3DSA:1.10.10.60 208 255 4.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 Gene3D G3DSA:3.40.50.2300 3 133 7.9E-41 T 23-04-2016 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 Pfam PF00072 Response regulator receiver domain 10 120 1.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 SMART SM00448 8 120 7.1E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 SMART SM00342 170 253 5.3E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 SUPERFAMILY SSF52172 4 133 8.54E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06385 d2d921e207a93364036d2dcdd0e3b92b 257 Pfam PF12833 Helix-turn-helix domain 176 254 4.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PANTHER PTHR30612 8 65 0.0 T 23-04-2016 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PANTHER PTHR30612 110 124 0.0 T 23-04-2016 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PANTHER PTHR30612 468 1106 0.0 T 23-04-2016 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PANTHER PTHR30612 170 394 0.0 T 23-04-2016 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SMART SM00957 5 585 4.2E-237 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PRINTS PR00906 SecA protein signature 108 132 8.28E-28 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PRINTS PR00906 SecA protein signature 522 544 8.28E-28 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PRINTS PR00906 SecA protein signature 596 609 8.28E-28 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 PRINTS PR00906 SecA protein signature 559 576 8.28E-28 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.40.50.300 602 773 2.9E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:1.10.3060.10 943 1021 2.7E-40 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:1.10.3060.10 802 900 2.7E-40 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Pfam PF07516 SecA Wing and Scaffold domain 772 1020 8.1E-53 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.90.1440.10 483 550 8.0E-39 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.90.1440.10 407 450 8.0E-39 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Pfam PF01043 SecA preprotein cross-linking domain 400 541 8.1E-35 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 1024 19.277 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF81767 408 452 1.7E-30 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF81767 485 549 1.7E-30 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 ProSitePatterns PS01312 SecA family signature. 683 698 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF52540 12 57 2.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF52540 142 319 2.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF52540 551 598 2.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 86 699 1.5E-198 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF81886 1082 1094 7.32E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF81886 774 902 7.32E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF81886 949 1032 7.32E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.40.50.300 5 62 5.0E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.40.50.300 552 599 5.0E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.40.50.300 169 319 5.0E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Gene3D G3DSA:3.40.50.300 105 123 5.0E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SUPERFAMILY SSF52540 601 772 5.97E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Pfam PF07517 SecA DEAD-like domain 7 585 2.3E-124 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 Pfam PF02810 SEC-C motif 1086 1103 2.4E-10 T 23-04-2016 IPR004027 SEC-C motif NIAKO_RS00810 4ea86e5dc35728317a80d8888d9a09ef 1106 SMART SM00958 412 541 2.5E-25 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NIAKO_RS16915 db7b00ead68655f4a79aa9d5d24cf1a4 196 Pfam PF08818 Domain of unknown function (DU1801) 20 115 4.0E-15 T 23-04-2016 IPR014922 Domain of unknown function DUF1801 NIAKO_RS16915 db7b00ead68655f4a79aa9d5d24cf1a4 196 PIRSF PIRSF021308 1 196 7.1E-87 T 23-04-2016 IPR016786 Uncharacterised protein YdeI, bacterial NIAKO_RS16915 db7b00ead68655f4a79aa9d5d24cf1a4 196 SUPERFAMILY SSF159888 13 125 6.28E-19 T 23-04-2016 NIAKO_RS16915 db7b00ead68655f4a79aa9d5d24cf1a4 196 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 133 191 1.1E-16 T 23-04-2016 NIAKO_RS20680 36291ce13b390dfb6b3e3c9103d54afd 132 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NIAKO_RS20680 36291ce13b390dfb6b3e3c9103d54afd 132 SUPERFAMILY SSF55811 13 125 3.11E-19 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS20680 36291ce13b390dfb6b3e3c9103d54afd 132 PANTHER PTHR22769 13 131 2.7E-14 T 23-04-2016 NIAKO_RS20680 36291ce13b390dfb6b3e3c9103d54afd 132 Gene3D G3DSA:3.90.79.10 8 126 6.1E-20 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS20680 36291ce13b390dfb6b3e3c9103d54afd 132 Pfam PF00293 NUDIX domain 14 112 1.0E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Gene3D G3DSA:3.40.50.620 10 196 3.1E-133 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Gene3D G3DSA:3.40.50.620 471 730 3.1E-133 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946 1 260 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946 582 1033 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946 312 557 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 SUPERFAMILY SSF50677 229 268 9.55E-29 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 SUPERFAMILY SSF50677 295 467 9.55E-29 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 1.5E-9 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 43 54 1.5E-9 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946:SF87 1 260 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946:SF87 582 1033 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 PANTHER PTHR11946:SF87 312 557 0.0 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Pfam PF08264 Anticodon-binding domain of tRNA 778 931 3.0E-32 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Gene3D G3DSA:1.10.730.10 732 922 2.0E-49 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 9 939 1.4E-290 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 SUPERFAMILY SSF52374 9 200 5.63E-121 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 SUPERFAMILY SSF52374 467 739 5.63E-121 T 23-04-2016 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 730 3.2E-148 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 SUPERFAMILY SSF47323 746 990 8.78E-58 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 1 1137 13.17 T 23-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 NIAKO_RS28145 cc054c62cb73d5b9136a61e6059bb4c5 1144 Gene3D G3DSA:3.90.740.10 240 470 4.0E-41 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS06080 f108d0acce0b00fdfd2dffc25c6bc066 151 PANTHER PTHR26402 10 131 2.1E-28 T 23-04-2016 NIAKO_RS06080 f108d0acce0b00fdfd2dffc25c6bc066 151 SMART SM00448 10 127 3.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06080 f108d0acce0b00fdfd2dffc25c6bc066 151 Pfam PF00072 Response regulator receiver domain 13 127 1.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06080 f108d0acce0b00fdfd2dffc25c6bc066 151 SUPERFAMILY SSF52172 11 131 3.7E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06080 f108d0acce0b00fdfd2dffc25c6bc066 151 Gene3D G3DSA:3.40.50.2300 11 131 1.9E-28 T 23-04-2016 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 PANTHER PTHR10516 183 298 9.1E-15 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 203 291 5.1E-16 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 Gene3D G3DSA:3.10.50.40 23 154 5.3E-8 T 23-04-2016 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 Gene3D G3DSA:3.10.50.40 172 300 5.9E-27 T 23-04-2016 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 PANTHER PTHR10516:SF261 183 298 9.1E-15 T 23-04-2016 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 SUPERFAMILY SSF54534 27 136 7.46E-9 T 23-04-2016 NIAKO_RS09940 bf9daf1fd3afac8b0f2e98b01effde95 319 SUPERFAMILY SSF54534 136 295 1.37E-22 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:1.10.287.130 811 875 2.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423 511 580 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423 1 104 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423 1068 1246 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423 762 1039 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 821 880 2.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423:SF487 511 580 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423:SF487 1 104 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423:SF487 1068 1246 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PANTHER PTHR24423:SF487 762 1039 2.3E-125 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:3.40.50.2300 1089 1215 2.6E-38 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 930 1032 3.2E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:1.10.10.60 1233 1290 7.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF47384 810 880 5.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF63829 506 626 4.74E-9 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF52172 1090 1226 7.12E-35 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SMART SM00342 1254 1337 1.3E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SMART SM00448 1092 1204 4.2E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF55874 869 1032 4.19E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF63829 273 500 2.35E-14 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 133 134 4.6E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 363 491 1.5E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 257 325 5.5E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 198 234 4.6E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 26 98 4.6E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:2.120.10.30 492 626 9.0E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF07494 Two component regulator propeller 567 590 0.0021 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF07494 Two component regulator propeller 351 373 0.0053 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF07494 Two component regulator propeller 34 57 5.0E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1033 1.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 977 1.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 981 991 1.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1014 1.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:3.30.565.10 887 1032 1.3E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF07495 Y_Y_Y domain 704 764 2.3E-11 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SMART SM00387 926 1036 3.6E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF00072 Response regulator receiver domain 1094 1204 2.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SMART SM00388 819 880 2.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF63829 167 327 7.19E-5 T 23-04-2016 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 SUPERFAMILY SSF46689 1290 1342 1.79E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Pfam PF12833 Helix-turn-helix domain 1262 1338 4.3E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13790 3c16e6ec54de198864348b3f37ba9f63 1353 Gene3D G3DSA:1.10.10.60 1291 1341 1.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 PANTHER PTHR11373 4 336 7.1E-76 T 23-04-2016 NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 SUPERFAMILY SSF109604 5 405 6.84E-96 T 23-04-2016 NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 Gene3D G3DSA:1.10.3210.10 6 249 8.8E-78 T 23-04-2016 IPR006674 HD domain NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 SMART SM00471 52 177 4.2E-9 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 PANTHER PTHR11373:SF4 4 336 7.1E-76 T 23-04-2016 NIAKO_RS34275 973a57abba53badd11ed1a8cade06c9c 406 Pfam PF01966 HD domain 56 170 3.8E-8 T 23-04-2016 IPR006674 HD domain NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 SUPERFAMILY SSF89260 236 334 1.57E-5 T 23-04-2016 NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 PANTHER PTHR16021:SF8 19 352 6.3E-20 T 23-04-2016 NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 Gene3D G3DSA:2.60.120.380 234 354 5.5E-10 T 23-04-2016 NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 SUPERFAMILY SSF55486 64 168 8.56E-9 T 23-04-2016 NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 PANTHER PTHR16021 19 352 6.3E-20 T 23-04-2016 NIAKO_RS27255 e6f4b885e0fc9ed3df44d4be7784363f 529 Gene3D G3DSA:3.40.390.10 109 233 1.3E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 SUPERFAMILY SSF53137 4 115 7.41E-46 T 23-04-2016 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 PANTHER PTHR12899 1 117 5.3E-35 T 23-04-2016 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 Gene3D G3DSA:3.30.420.100 21 117 1.8E-37 T 23-04-2016 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 117 1.1E-36 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 117 1.4E-43 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22920 6cf16c9034b285fd7213d80a92bd06cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 117 26.841 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 PANTHER PTHR30160 6 358 2.2E-67 T 23-04-2016 NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 12 341 3.1E-78 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 18 320 9.2E-47 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 SUPERFAMILY SSF52540 46 200 3.89E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 355 24.971 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NIAKO_RS04480 2f0316004b3cb2a66120cfbc7ea406c0 358 PANTHER PTHR30160:SF13 6 358 2.2E-67 T 23-04-2016 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 PANTHER PTHR32294 1 941 1.0E-175 T 23-04-2016 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 SMART SM00481 1 68 3.4E-5 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 Pfam PF14579 Helix-hairpin-helix motif 732 815 1.2E-17 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 Gene3D G3DSA:3.20.20.140 7 83 1.3E-7 T 23-04-2016 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 Gene3D G3DSA:3.20.20.140 706 783 1.3E-7 T 23-04-2016 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 Pfam PF02811 PHP domain 4 107 4.0E-9 T 23-04-2016 IPR004013 PHP domain GO:0003824 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 252 655 2.1E-107 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 SUPERFAMILY SSF89550 7 68 7.26E-7 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS22610 31985c5b3b314d41fcbaeeea8bb0b862 983 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 150 924 1.7E-147 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 Pfam PF08665 PglZ domain 232 423 1.2E-22 T 23-04-2016 IPR013973 PglZ domain NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 SUPERFAMILY SSF53649 228 513 5.62E-5 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 Gene3D G3DSA:3.40.50.2300 5 127 1.1E-29 T 23-04-2016 NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 SUPERFAMILY SSF52172 5 142 1.28E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 SMART SM00448 4 115 1.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 Pfam PF00072 Response regulator receiver domain 6 112 1.0E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34280 a905d80d834c522e167ef6a5d3f84316 518 PANTHER PTHR26402 4 147 1.7E-28 T 23-04-2016 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Pfam PF01926 50S ribosome-binding GTPase 6 121 4.8E-29 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Pfam PF01926 50S ribosome-binding GTPase 181 298 7.3E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 PANTHER PTHR11649:SF60 6 436 1.7E-120 T 23-04-2016 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 PANTHER PTHR11649 6 436 1.7E-120 T 23-04-2016 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 SMART SM00382 2 143 0.05 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 SMART SM00382 177 354 2.1 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 139 7.8E-22 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 336 1.5E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 4.13E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 74 92 4.13E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Gene3D G3DSA:3.40.50.300 3 168 6.4E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Gene3D G3DSA:3.40.50.300 177 361 4.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 SUPERFAMILY SSF52540 139 437 3.64E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 SUPERFAMILY SSF52540 4 166 1.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 5.8E-31 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 PIRSF PIRSF006485 2 438 1.0E-166 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Gene3D G3DSA:3.30.300.20 362 438 3.5E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 Hamap MF_00195 GTPase Der [der]. 3 438 37.425 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NIAKO_RS01630 ebc638aba7f7850c8c6e7d00fad10a79 438 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 5 436 7.2E-168 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 Pfam PF13102 Phage integrase SAM-like domain 8 160 3.5E-32 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 PANTHER PTHR30349 34 359 1.5E-30 T 23-04-2016 NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 SUPERFAMILY SSF56349 111 394 1.53E-29 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 Gene3D G3DSA:1.10.443.10 215 391 2.1E-21 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 PANTHER PTHR30349:SF26 34 359 1.5E-30 T 23-04-2016 NIAKO_RS16655 4f28d1487a054ff61848c442edb05c74 410 Pfam PF00589 Phage integrase family 215 388 1.9E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 SUPERFAMILY SSF101898 208 485 2.07E-39 T 23-04-2016 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Gene3D G3DSA:2.120.10.30 377 485 1.5E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Gene3D G3DSA:2.120.10.30 173 376 1.7E-36 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 SUPERFAMILY SSF81296 17 96 1.09E-10 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Gene3D G3DSA:2.60.40.10 100 172 5.3E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 SUPERFAMILY SSF81296 100 181 2.45E-12 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 PANTHER PTHR24103:SF378 208 486 6.3E-28 T 23-04-2016 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Pfam PF01436 NHL repeat 458 484 1.2E-4 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Pfam PF01436 NHL repeat 263 289 3.9E-4 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Pfam PF01833 IPT/TIG domain 17 95 2.5E-6 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Pfam PF01833 IPT/TIG domain 101 180 1.3E-5 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 PANTHER PTHR24103 208 486 6.3E-28 T 23-04-2016 NIAKO_RS15780 57608bd68d379491b940cd6fa8b3801b 488 Gene3D G3DSA:2.60.40.10 15 99 1.7E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Gene3D G3DSA:1.10.8.60 316 387 5.2E-21 T 23-04-2016 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 PANTHER PTHR32071 2 454 1.2E-174 T 23-04-2016 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Gene3D G3DSA:3.40.50.300 143 315 2.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Pfam PF02954 Bacterial regulatory protein, Fis family 407 448 1.8E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Gene3D G3DSA:1.10.10.60 391 450 1.3E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 4.1E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 4.1E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 SMART SM00448 1 115 8.5E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Pfam PF00072 Response regulator receiver domain 2 115 3.0E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Pfam PF00158 Sigma-54 interaction domain 143 310 1.4E-64 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 SUPERFAMILY SSF52172 2 188 4.98E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 SMART SM00382 163 306 2.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 Gene3D G3DSA:3.40.50.2300 2 128 7.4E-32 T 23-04-2016 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 SUPERFAMILY SSF52540 143 384 3.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS19840 6900e02d8273f50cef3dd9405e2cf435 457 SUPERFAMILY SSF46689 356 450 7.17E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS22165 f402677965350281947915f20a547777 194 PANTHER PTHR30173 7 182 3.3E-40 T 23-04-2016 NIAKO_RS22165 f402677965350281947915f20a547777 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 1.1E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22165 f402677965350281947915f20a547777 194 SUPERFAMILY SSF88659 116 182 6.17E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22165 f402677965350281947915f20a547777 194 Gene3D G3DSA:1.10.1740.10 7 111 1.1E-31 T 23-04-2016 NIAKO_RS22165 f402677965350281947915f20a547777 194 Pfam PF04542 Sigma-70 region 2 25 91 4.3E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22165 f402677965350281947915f20a547777 194 Gene3D G3DSA:1.10.10.10 118 183 2.9E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS22165 f402677965350281947915f20a547777 194 SUPERFAMILY SSF88946 7 103 1.49E-27 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22165 f402677965350281947915f20a547777 194 Pfam PF08281 Sigma-70, region 4 127 177 1.7E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 769 906 7.2E-44 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Gene3D G3DSA:3.40.50.970 133 503 3.4E-65 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 PIRSF PIRSF000157 1 907 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 PANTHER PTHR23152:SF4 5 907 0.0 T 23-04-2016 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 SUPERFAMILY SSF52518 554 771 4.61E-45 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 PANTHER PTHR23152 5 907 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 6 43 3.2E-12 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Pfam PF00676 Dehydrogenase E1 component 183 497 6.8E-52 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 SMART SM00861 572 764 4.8E-51 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 SUPERFAMILY SSF52518 100 500 3.16E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Gene3D G3DSA:3.40.50.970 592 769 3.5E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 Pfam PF02779 Transketolase, pyrimidine binding domain 572 765 1.5E-56 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS20800 f2309d2b80f6784bded1cd1f3074bdf4 907 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 6 905 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 683 764 2.88E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 24 103 1.7E-22 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 100 188 5.23E-24 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 605 679 1.11E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 520 604 1.1E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 1017 1086 3.2E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 286 353 7.2E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 106 188 7.5E-25 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 768 854 2.0E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 356 437 1.7E-19 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 684 767 1.2E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 438 520 3.4E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 620 680 1.1E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 523 606 1.9E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 936 1016 3.8E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 1104 1185 5.7E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 26 103 1.7E-21 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 855 934 8.8E-21 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 198 274 1.3E-18 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 936 1017 4.19E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1467 1514 0.001 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 861 921 3.4E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 373 423 1.2E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 214 262 3.7E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 455 503 5.2E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 123 176 2.3E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF00801 PKD domain 41 92 3.2E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 197 275 1.24E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 PANTHER PTHR13833:SF44 27 116 9.5E-20 T 23-04-2016 NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Pfam PF13585 C-terminal domain of CHU protein family 1505 1594 1.0E-18 T 23-04-2016 NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 439 513 1.96E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 780 844 2.88E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 349 435 7.59E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 847 932 9.03E-20 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 1104 1180 6.02E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1506 1597 1.6E-12 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 Gene3D G3DSA:2.60.40.670 1192 1249 1.0E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 1013 1086 1.83E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 683 765 1.4E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 440 521 1.2E-10 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 938 1017 3.2E-7 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 108 190 2.8E-22 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 1018 1094 2.0E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 26 106 1.2E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 772 853 6.3E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 362 437 4.1E-9 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 606 682 5.6E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 525 603 0.006 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 1105 1185 0.54 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 279 356 0.38 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 196 276 8.7E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SMART SM00089 856 935 1.8E-12 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 PANTHER PTHR13833 27 116 9.5E-20 T 23-04-2016 NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 285 353 2.09E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS21965 8d3446bf158803348df1274cbb6fb936 1597 SUPERFAMILY SSF49299 1155 1250 2.62E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 328 3.2E-92 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 SUPERFAMILY SSF47648 1 68 7.2E-11 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 SUPERFAMILY SSF52418 71 327 5.36E-78 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 Gene3D G3DSA:1.20.970.10 1 64 2.1E-10 T 23-04-2016 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 329 30.136 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 PANTHER PTHR11922:SF5 73 329 6.4E-81 T 23-04-2016 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 62 3.6E-6 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 Gene3D G3DSA:3.40.1030.10 73 329 7.9E-86 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 PANTHER PTHR11922 73 329 6.4E-81 T 23-04-2016 NIAKO_RS01770 c3f833f133163b9cfd1a6bd272ffbf5c 330 Pfam PF00591 Glycosyl transferase family, a/b domain 74 319 6.3E-69 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NIAKO_RS13265 5ee0616dcdf39bf2b7e780d25185f6db 296 Pfam PF00149 Calcineurin-like phosphoesterase 34 248 5.0E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS13265 5ee0616dcdf39bf2b7e780d25185f6db 296 SUPERFAMILY SSF56300 18 268 6.69E-42 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS13265 5ee0616dcdf39bf2b7e780d25185f6db 296 SMART SM00156 11 288 0.0018 T 23-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 NIAKO_RS13265 5ee0616dcdf39bf2b7e780d25185f6db 296 Gene3D G3DSA:3.60.21.10 19 270 1.3E-35 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 PANTHER PTHR23083 22 327 1.8E-45 T 23-04-2016 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 105 184 8.0E-10 T 23-04-2016 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 210 284 3.4E-8 T 23-04-2016 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 Gene3D G3DSA:1.25.40.10 22 123 1.8E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 Gene3D G3DSA:1.25.40.10 129 328 1.5E-42 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 Pfam PF13181 Tetratricopeptide repeat 296 328 5.4E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 228 261 72.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 296 329 0.0066 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 58 91 220.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 262 295 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 159 192 3.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 125 158 21.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SMART SM00028 24 57 1.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10390 a45b08ad2e8ed752df650fc8a2422178 342 SUPERFAMILY SSF48452 27 330 4.17E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 Gene3D G3DSA:1.10.1740.10 10 116 4.2E-30 T 23-04-2016 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 Gene3D G3DSA:1.10.10.10 122 180 4.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 SUPERFAMILY SSF88946 11 104 1.71E-25 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 Pfam PF04542 Sigma-70 region 2 27 93 2.5E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 177 3.7E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 Pfam PF08281 Sigma-70, region 4 124 175 4.9E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 49 80 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 SUPERFAMILY SSF88659 125 181 8.94E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22300 39b6faf84c730cc180aa87c264b61b22 182 PANTHER PTHR30173 1 181 6.4E-39 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 312 341 2.3E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 PANTHER PTHR11532:SF57 134 464 3.7E-234 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 PANTHER PTHR11532:SF57 576 1133 3.7E-234 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.170.130.10 244 337 1.3E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Pfam PF13715 CarboxypepD_reg-like domain 144 223 2.0E-15 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF49464 142 220 7.98E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 PANTHER PTHR11532 134 464 3.7E-234 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 PANTHER PTHR11532 576 1133 3.7E-234 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF56935 960 1005 2.66E-84 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF56935 535 877 2.66E-84 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF56935 1047 1135 2.66E-84 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF56935 410 498 2.66E-84 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 SUPERFAMILY SSF56935 220 359 2.66E-84 T 23-04-2016 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.40.170.20 1038 1135 5.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.40.170.20 419 911 5.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.40.170.20 970 995 5.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.40.170.20 338 359 5.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Gene3D G3DSA:2.60.40.1120 144 199 3.4E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 Pfam PF07715 TonB-dependent Receptor Plug Domain 238 335 1.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17425 c194c6ceb2409bbe84a6a9d5198a2394 1135 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 143 1135 5.3E-246 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 183 2.1E-59 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 PANTHER PTHR21403 3 283 2.7E-115 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 Pfam PF01634 ATP phosphoribosyltransferase 50 204 3.4E-51 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 Gene3D G3DSA:3.40.190.10 2 142 5.7E-45 T 23-04-2016 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 SUPERFAMILY SSF53850 2 209 4.62E-64 T 23-04-2016 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 Pfam PF08029 HisG, C-terminal domain 209 281 6.7E-28 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 PANTHER PTHR21403:SF0 3 283 2.7E-115 T 23-04-2016 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 Gene3D G3DSA:3.30.70.120 213 283 3.6E-30 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 2 284 34.213 T 23-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 SUPERFAMILY SSF54913 213 283 6.89E-23 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta NIAKO_RS22030 c107bafe1c3dfbe1bf4780ceaa792009 284 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 187 283 3.2E-31 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 SUPERFAMILY SSF52317 1 195 1.65E-31 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 SUPERFAMILY SSF46689 270 319 6.27E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 Pfam PF12833 Helix-turn-helix domain 240 317 6.0E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 PANTHER PTHR11019 97 324 1.2E-46 T 23-04-2016 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 SMART SM00342 233 316 2.3E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 Pfam PF01965 DJ-1/PfpI family 40 178 1.3E-14 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 Gene3D G3DSA:1.10.10.60 270 319 2.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 SUPERFAMILY SSF46689 217 267 1.93E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 Gene3D G3DSA:3.40.50.880 24 221 4.3E-34 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 Gene3D G3DSA:1.10.10.60 222 269 1.2E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35465 e86d1f27d09ff02bd3d1c050447e1ceb 326 PANTHER PTHR11019:SF68 97 324 1.2E-46 T 23-04-2016 NIAKO_RS32985 e32bb8b6fa8b90921c929e967ab15bcf 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 75 278 4.4E-67 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS32985 e32bb8b6fa8b90921c929e967ab15bcf 285 PANTHER PTHR11820 1 284 7.5E-129 T 23-04-2016 NIAKO_RS32985 e32bb8b6fa8b90921c929e967ab15bcf 285 PANTHER PTHR11820:SF71 1 284 7.5E-129 T 23-04-2016 NIAKO_RS32985 e32bb8b6fa8b90921c929e967ab15bcf 285 SUPERFAMILY SSF56529 65 283 1.96E-77 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS32985 e32bb8b6fa8b90921c929e967ab15bcf 285 Gene3D G3DSA:3.90.850.10 64 279 8.7E-87 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417:SF2 69 149 1.2E-41 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417 212 314 1.2E-41 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 SUPERFAMILY SSF53756 329 447 2.83E-15 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 SUPERFAMILY SSF53756 73 298 2.83E-15 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417:SF2 212 314 1.2E-41 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417:SF2 335 446 1.2E-41 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417 335 446 1.2E-41 T 23-04-2016 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 70 230 1.4E-46 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 NIAKO_RS24700 5f0f9479cea39be8838918742166e225 453 PANTHER PTHR23417 69 149 1.2E-41 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 SUPERFAMILY SSF53187 313 506 5.34E-36 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 Gene3D G3DSA:3.30.1150.10 513 577 1.7E-4 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 SMART SM00646 383 502 1.9E-11 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 PANTHER PTHR30404:SF0 312 541 1.2E-40 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 PANTHER PTHR30404 312 541 1.2E-40 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 SUPERFAMILY SSF74653 539 582 9.81E-7 T 23-04-2016 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 Pfam PF05569 BlaR1 peptidase M56 164 264 2.3E-11 T 23-04-2016 IPR008756 Peptidase M56 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 Gene3D G3DSA:3.40.630.40 313 505 3.1E-44 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 315 502 4.1E-38 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS04420 d22b8a3a400eabde7036dc28f31d7f66 654 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 543 581 5.4E-5 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 Gene3D G3DSA:3.40.50.300 2 228 2.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 PANTHER PTHR24220 2 234 3.6E-141 T 23-04-2016 NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 SMART SM00382 25 212 5.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 PANTHER PTHR24220:SF497 2 234 3.6E-141 T 23-04-2016 NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 SUPERFAMILY SSF52540 2 233 5.32E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 237 2.2E-115 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 NIAKO_RS29950 19251489669fcdbd547356f71a257cd5 257 Pfam PF00005 ABC transporter 17 162 1.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 TIGRFAM TIGR00492 alr: alanine racemase 482 842 1.8E-95 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SUPERFAMILY SSF50621 712 843 5.58E-46 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SUPERFAMILY SSF51419 486 709 1.33E-50 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Pfam PF01168 Alanine racemase, N-terminal domain 486 704 3.0E-50 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Pfam PF00842 Alanine racemase, C-terminal domain 717 841 1.3E-41 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PANTHER PTHR23135 26 501 7.5E-125 T 23-04-2016 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Hamap MF_01201 Alanine racemase. 479 842 29.587 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 44 472 1.5E-92 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Gene3D G3DSA:3.20.20.10 488 695 4.0E-58 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Gene3D G3DSA:3.40.1390.10 25 109 2.0E-11 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PANTHER PTHR23135:SF3 26 501 7.5E-125 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Gene3D G3DSA:3.90.190.20 336 479 5.2E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SUPERFAMILY SSF53623 121 334 1.7E-33 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Gene3D G3DSA:3.40.1190.10 110 333 2.4E-44 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Gene3D G3DSA:2.40.37.10 696 843 2.5E-57 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SMART SM01005 717 842 8.5E-65 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SUPERFAMILY SSF53244 337 473 2.75E-22 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Pfam PF08245 Mur ligase middle domain 126 316 4.5E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 SUPERFAMILY SSF63418 19 118 6.15E-14 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 824 837 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 635 646 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 679 706 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 602 614 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 733 748 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 505 521 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 750 765 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 PRINTS PR00992 Alanine racemase signature 541 559 6.6E-43 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS27730 75d8393eabb347a1a51268156f0ccd8e 844 Pfam PF01225 Mur ligase family, catalytic domain 40 113 2.4E-6 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 PANTHER PTHR30173 1 180 2.2E-15 T 23-04-2016 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 Gene3D G3DSA:1.10.10.10 117 179 1.2E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 Gene3D G3DSA:1.10.1740.10 7 111 1.5E-7 T 23-04-2016 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 178 2.1E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 SUPERFAMILY SSF88946 7 108 4.32E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 Pfam PF04542 Sigma-70 region 2 30 67 1.3E-4 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 Pfam PF08281 Sigma-70, region 4 127 176 7.4E-7 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15120 78c19950ac34afaa82f9c2129c52b93d 196 SUPERFAMILY SSF88659 107 180 2.8E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 PANTHER PTHR11019 6 110 4.0E-35 T 23-04-2016 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 SUPERFAMILY SSF46689 8 60 2.15E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 SMART SM00342 25 108 3.2E-31 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 Pfam PF12833 Helix-turn-helix domain 31 109 6.3E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 SUPERFAMILY SSF46689 61 110 1.43E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 4.2E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 4.2E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 PANTHER PTHR11019:SF61 6 110 4.0E-35 T 23-04-2016 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 Gene3D G3DSA:1.10.10.60 7 61 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 Gene3D G3DSA:1.10.10.60 62 110 7.9E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23315 0a1f7ef2a01a340809ae3c85471f27de 112 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11630 beccf40f6566a426a477ce0dcdf215dc 142 Pfam PF08818 Domain of unknown function (DU1801) 18 134 9.0E-9 T 23-04-2016 IPR014922 Domain of unknown function DUF1801 NIAKO_RS11630 beccf40f6566a426a477ce0dcdf215dc 142 SUPERFAMILY SSF159888 7 139 7.15E-6 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.170.130.10 101 222 2.7E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1059 1.1E-135 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Pfam PF13715 CarboxypepD_reg-like domain 24 104 1.3E-14 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532 1039 1057 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532 880 1022 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532 1 425 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532 467 524 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532 595 863 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF56935 959 1027 8.24E-62 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF56935 101 241 8.24E-62 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF56935 881 926 8.24E-62 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF56935 316 403 8.24E-62 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF56935 453 808 8.24E-62 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532:SF57 1039 1057 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532:SF57 880 1022 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532:SF57 1 425 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532:SF57 467 524 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 PANTHER PTHR11532:SF57 595 863 2.3E-84 T 23-04-2016 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 218 1.4E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 SUPERFAMILY SSF49464 24 102 4.05E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.60.40.1120 24 100 1.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.40.170.20 448 817 1.2E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.40.170.20 223 253 1.2E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.40.170.20 890 916 1.2E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.40.170.20 948 1059 1.2E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01240 1b7f8b6b79bf787b62c6e450766cccfc 1059 Gene3D G3DSA:2.40.170.20 325 404 1.2E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 SUPERFAMILY SSF46894 912 977 2.18E-9 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 Pfam PF07495 Y_Y_Y domain 684 745 4.2E-12 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 SMART SM00421 919 976 0.0063 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 Gene3D G3DSA:1.10.10.10 922 977 3.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 SUPERFAMILY SSF63829 42 121 1.96E-6 T 23-04-2016 NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 SUPERFAMILY SSF63829 245 355 1.96E-6 T 23-04-2016 NIAKO_RS30390 82bb3157b046774cccf3b7240b8c9907 984 Gene3D G3DSA:2.120.10.30 44 110 2.0E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.131 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 SUPERFAMILY SSF110399 1 235 1.44E-84 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.5E-106 T 23-04-2016 NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 PANTHER PTHR34266 1 256 4.9E-150 T 23-04-2016 NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 Gene3D G3DSA:3.20.20.70 1 254 2.4E-57 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17585 5380b2a7dfe21a6f9ab676afec48f317 257 PANTHER PTHR34266:SF2 1 256 4.9E-150 T 23-04-2016 NIAKO_RS34845 c1bfc14ee97662bbf02e41dd400368a6 219 PANTHER PTHR30558:SF3 144 206 3.4E-16 T 23-04-2016 NIAKO_RS34845 c1bfc14ee97662bbf02e41dd400368a6 219 PANTHER PTHR30558:SF3 8 88 3.4E-16 T 23-04-2016 NIAKO_RS34845 c1bfc14ee97662bbf02e41dd400368a6 219 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 199 8.3E-23 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NIAKO_RS34845 c1bfc14ee97662bbf02e41dd400368a6 219 PANTHER PTHR30558 144 206 3.4E-16 T 23-04-2016 NIAKO_RS34845 c1bfc14ee97662bbf02e41dd400368a6 219 PANTHER PTHR30558 8 88 3.4E-16 T 23-04-2016 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Gene3D G3DSA:1.10.300.10 100 190 2.1E-25 T 23-04-2016 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 4 419 3.5E-145 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 SUPERFAMILY SSF52540 2 419 3.51E-150 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 SMART SM00788 2 419 1.9E-223 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Pfam PF00709 Adenylosuccinate synthetase 4 418 3.3E-164 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 9 16 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 PANTHER PTHR11846:SF0 2 421 1.1E-202 T 23-04-2016 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 421 159.347 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 PANTHER PTHR11846 2 421 1.1E-202 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Gene3D G3DSA:3.90.170.10 263 420 2.4E-60 T 23-04-2016 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Gene3D G3DSA:3.40.440.10 2 92 1.7E-63 T 23-04-2016 NIAKO_RS27580 e3d4cc5086d64ee289ebc7756d0fc9bb 421 Gene3D G3DSA:3.40.440.10 191 262 1.7E-63 T 23-04-2016 NIAKO_RS22025 4a17eb1f857e7b6c569172678b0a4166 158 Pfam PF02566 OsmC-like protein 50 143 1.6E-13 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS22025 4a17eb1f857e7b6c569172678b0a4166 158 Gene3D G3DSA:3.30.300.20 1 150 1.3E-61 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS22025 4a17eb1f857e7b6c569172678b0a4166 158 SUPERFAMILY SSF82784 3 150 1.96E-46 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS18285 510e51e61fbd2f0dd76afc607c6ae73d 139 Gene3D G3DSA:3.10.129.10 6 128 4.6E-13 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS18285 510e51e61fbd2f0dd76afc607c6ae73d 139 SUPERFAMILY SSF54637 2 128 7.72E-18 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS23095 930bc939fdd59882af4d951b7fcc7758 149 SUPERFAMILY SSF54637 2 140 1.74E-26 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS23095 930bc939fdd59882af4d951b7fcc7758 149 PANTHER PTHR31793 1 142 4.7E-22 T 23-04-2016 NIAKO_RS23095 930bc939fdd59882af4d951b7fcc7758 149 Pfam PF13279 Thioesterase-like superfamily 20 140 3.0E-12 T 23-04-2016 NIAKO_RS23095 930bc939fdd59882af4d951b7fcc7758 149 Gene3D G3DSA:3.10.129.10 8 142 1.0E-25 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF00364 Biotin-requiring enzyme 1076 1142 5.9E-14 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:3.10.600.10 988 1062 4.3E-28 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:2.40.50.100 1073 1142 1.9E-18 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 PIRSF PIRSF001594 1 1142 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF02436 Conserved carboxylase domain 828 1027 1.6E-66 T 23-04-2016 IPR003379 Carboxylase, conserved domain NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 PANTHER PTHR18866 1 1142 0.0 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:3.40.50.20 1 130 3.7E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1099 1116 - T 23-04-2016 IPR001882 Biotin-binding site NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF51230 1070 1142 5.37E-17 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF56059 84 351 5.48E-67 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF52440 1 114 5.76E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF89000 833 1010 7.45E-51 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF00682 HMGL-like 531 806 2.8E-28 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 111 5.1E-43 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:3.20.20.70 509 819 9.6E-126 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.9E-78 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1141 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF51569 523 836 1.43E-78 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Pfam PF02785 Biotin carboxylase C-terminal domain 343 450 1.9E-28 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:3.30.1490.20 131 203 2.9E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SUPERFAMILY SSF51246 338 457 3.87E-33 T 23-04-2016 IPR011054 Rudiment single hybrid motif NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:3.30.470.20 204 456 5.9E-93 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 Gene3D G3DSA:1.10.10.60 953 987 1.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 PANTHER PTHR18866:SF103 1 1142 0.0 T 23-04-2016 NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 SMART SM00878 343 450 3.0E-39 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS02820 7df1f0fecd79044fead9989648bd2a0f 1142 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Gene3D G3DSA:2.60.40.10 868 953 2.0E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Gene3D G3DSA:3.20.20.140 1104 1290 2.4E-8 T 23-04-2016 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 SUPERFAMILY SSF89550 1230 1363 1.18E-15 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 SUPERFAMILY SSF89550 1102 1203 1.18E-15 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 SUPERFAMILY SSF49265 464 484 1.35E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 SUPERFAMILY SSF49265 817 957 1.35E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Pfam PF12733 Cadherin-like beta sandwich domain 236 318 5.6E-20 T 23-04-2016 IPR025883 Cadherin-like beta sandwich domain NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 SUPERFAMILY SSF49265 896 1077 2.41E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1577 1649 3.2E-14 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Gene3D G3DSA:2.60.40.10 739 855 3.8E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Gene3D G3DSA:2.60.40.10 1486 1566 3.6E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS25165 7ecc58de0943d0217266bba56e45fe37 1650 Gene3D G3DSA:2.60.40.10 990 1077 2.7E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS16065 60be0cb253b16c8bdaa21e0f34701936 148 SUPERFAMILY SSF51735 3 106 5.91E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16065 60be0cb253b16c8bdaa21e0f34701936 148 PANTHER PTHR11695 1 148 1.9E-50 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS16065 60be0cb253b16c8bdaa21e0f34701936 148 PANTHER PTHR11695:SF403 1 148 1.9E-50 T 23-04-2016 NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.1E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.1E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.1E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 Gene3D G3DSA:1.10.10.10 2 89 5.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 PANTHER PTHR33154 1 87 5.3E-14 T 23-04-2016 NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 SUPERFAMILY SSF46785 4 89 4.39E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 Pfam PF12840 Helix-turn-helix domain 9 69 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07405 1d8f67ac42adda09ff835d50b1d79d07 92 SMART SM00418 8 88 1.4E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 SUPERFAMILY SSF51905 28 248 3.37E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 Pfam PF01266 FAD dependent oxidoreductase 30 295 3.8E-34 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 PANTHER PTHR13847:SF201 8 295 1.3E-82 T 23-04-2016 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 Gene3D G3DSA:3.50.50.60 170 245 3.8E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 Gene3D G3DSA:3.50.50.60 19 116 3.8E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08085 5042d136bf7b99e35e31d363345dfab9 297 PANTHER PTHR13847 8 295 1.3E-82 T 23-04-2016 NIAKO_RS16590 f975ac676f340602ff2a75c323c73aec 234 SUPERFAMILY SSF52200 4 114 5.62E-17 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS16590 f975ac676f340602ff2a75c323c73aec 234 Gene3D G3DSA:3.40.50.10140 4 112 3.3E-12 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS16590 f975ac676f340602ff2a75c323c73aec 234 Pfam PF13676 TIR domain 4 110 2.4E-16 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 Gene3D G3DSA:3.60.21.10 22 254 1.2E-27 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 PANTHER PTHR24095 285 438 2.1E-19 T 23-04-2016 NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 Gene3D G3DSA:2.140.10.10 275 612 4.7E-70 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SUPERFAMILY SSF56300 24 249 1.59E-42 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SUPERFAMILY SSF50998 279 607 5.05E-55 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 Pfam PF00149 Calcineurin-like phosphoesterase 24 201 1.3E-17 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 337 368 1.6E-7 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 417 449 7.0E-5 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 463 495 73.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 549 581 3.6E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 377 408 13.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 SMART SM00564 297 328 2.2E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 PANTHER PTHR24095:SF185 285 438 2.1E-19 T 23-04-2016 NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 Pfam PF13360 PQQ-like domain 282 447 2.6E-23 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat NIAKO_RS27185 008f35d378fd1df80ece7fabc9f897ca 617 Pfam PF13360 PQQ-like domain 551 614 4.5E-4 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Gene3D G3DSA:3.20.70.20 590 635 5.6E-64 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Gene3D G3DSA:3.20.70.20 142 338 5.6E-64 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Gene3D G3DSA:3.20.70.20 388 545 5.6E-64 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PANTHER PTHR11573 3 789 0.0 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 144 740 9.4E-222 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 211 1.4E-23 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 SUPERFAMILY SSF51998 673 749 4.27E-191 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 SUPERFAMILY SSF51998 214 640 4.27E-191 T 23-04-2016 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 SUPERFAMILY SSF48168 6 213 7.06E-68 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Pfam PF03477 ATP cone domain 1 88 1.4E-16 T 23-04-2016 IPR005144 ATP-cone domain NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 Pfam PF02867 Ribonucleotide reductase, barrel domain 215 736 7.5E-187 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 579 601 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 422 433 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 497 519 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 525 548 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 292 311 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 590 617 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS26995 2b8518bb518c08f5ddd6f93687a4371f 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 482 5.0E-61 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Pfam PF02803 Thiolase, C-terminal domain 276 396 4.5E-53 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 ProSitePatterns PS00737 Thiolases signature 2. 344 360 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 SUPERFAMILY SSF53901 4 275 3.35E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 SUPERFAMILY SSF53901 276 396 4.83E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Gene3D G3DSA:3.40.47.10 282 396 1.4E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Gene3D G3DSA:3.40.47.10 152 199 1.4E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 PANTHER PTHR18919:SF91 1 398 1.5E-209 T 23-04-2016 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 PIRSF PIRSF000429 1 398 1.9E-136 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 396 4.0E-145 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Gene3D G3DSA:3.40.47.10 200 281 4.3E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Gene3D G3DSA:3.40.47.10 4 125 4.3E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 Pfam PF00108 Thiolase, N-terminal domain 4 268 8.1E-78 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 NIAKO_RS34705 54a1bc08413a9aa15dbed4437c049a85 398 PANTHER PTHR18919 1 398 1.5E-209 T 23-04-2016 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 SUPERFAMILY SSF49265 408 507 3.89E-8 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 PANTHER PTHR30032:SF2 25 199 1.1E-76 T 23-04-2016 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 PANTHER PTHR30032:SF2 223 532 1.1E-76 T 23-04-2016 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 Gene3D G3DSA:2.60.40.10 411 508 9.6E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 706 778 1.8E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 Gene3D G3DSA:3.20.20.80 108 197 1.4E-5 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 SMART SM00060 409 498 0.0011 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 SUPERFAMILY SSF51445 56 332 2.32E-20 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 Pfam PF02638 Glycosyl hydrolase-like 10 26 340 2.7E-66 T 23-04-2016 IPR003790 Glycosyl hydrolase-like 10 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 PANTHER PTHR30032 25 199 1.1E-76 T 23-04-2016 NIAKO_RS37310 21cad7d072612a0cde83c490fefc4c49 781 PANTHER PTHR30032 223 532 1.1E-76 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Pfam PF00702 haloacid dehalogenase-like hydrolase 410 611 4.7E-30 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Gene3D G3DSA:3.40.50.1000 519 666 3.5E-45 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Gene3D G3DSA:3.40.50.1000 386 430 3.5E-45 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 178 700 9.9E-118 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF81665 315 408 1.83E-17 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF81665 177 210 1.83E-17 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF81665 647 679 1.83E-17 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Gene3D G3DSA:2.70.150.10 145 314 1.3E-26 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF56784 470 697 2.52E-45 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF56784 413 432 2.52E-45 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00943 Copper-transporting ATPase signature 576 593 3.9E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00943 Copper-transporting ATPase signature 131 150 3.9E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00943 Copper-transporting ATPase signature 44 64 3.9E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00943 Copper-transporting ATPase signature 397 412 3.9E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00943 Copper-transporting ATPase signature 337 351 3.9E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF81653 231 314 3.01E-20 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 SUPERFAMILY SSF55008 1 67 1.31E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 182 678 8.0E-81 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Pfam PF00122 E1-E2 ATPase 181 405 9.2E-64 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 633 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 617 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 535 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 414 428 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 264 278 7.7E-24 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PANTHER PTHR24093:SF50 1 701 2.5E-173 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 416 422 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Gene3D G3DSA:3.30.70.100 1 66 1.1E-12 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 146 700 3.6E-157 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 PANTHER PTHR24093 1 701 2.5E-173 T 23-04-2016 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 Pfam PF00403 Heavy-metal-associated domain 7 63 1.7E-5 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS34230 a8bf45a2514f5555a3ac8a7d20954105 706 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 130 700 3.7E-149 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF56935 348 440 1.1E-81 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF56935 1016 1108 1.1E-81 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF56935 472 827 1.1E-81 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF56935 927 970 1.1E-81 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF56935 129 271 1.1E-81 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 223 253 1.3E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 247 6.1E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.40.170.20 1002 1108 7.1E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.40.170.20 935 970 7.1E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.40.170.20 252 267 7.1E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.40.170.20 357 834 7.1E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 40 1108 1.8E-247 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.170.130.10 143 251 1.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 SUPERFAMILY SSF49464 40 142 3.14E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532:SF57 603 906 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532:SF57 925 1106 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532:SF57 549 575 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532:SF57 11 440 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532 603 906 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532 925 1106 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532 549 575 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 PANTHER PTHR11532 11 440 3.6E-235 T 23-04-2016 NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Gene3D G3DSA:2.60.40.1120 41 142 2.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20560 d5b56c694f84938550ec37d39c9f4dd6 1108 Pfam PF13620 Carboxypeptidase regulatory-like domain 41 122 5.8E-12 T 23-04-2016 NIAKO_RS28930 46d6db417235443920625ec40a6a954c 183 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 22 180 4.1E-50 T 23-04-2016 IPR012816 Conserved hypothetical protein CHP02464 NIAKO_RS28930 46d6db417235443920625ec40a6a954c 183 Pfam PF08719 Domain of unknown function (DUF1768) 22 181 2.0E-53 T 23-04-2016 IPR012816 Conserved hypothetical protein CHP02464 NIAKO_RS28930 46d6db417235443920625ec40a6a954c 183 SUPERFAMILY SSF143990 8 182 2.09E-51 T 23-04-2016 NIAKO_RS28930 46d6db417235443920625ec40a6a954c 183 PANTHER PTHR11079 89 175 8.5E-24 T 23-04-2016 NIAKO_RS28930 46d6db417235443920625ec40a6a954c 183 PANTHER PTHR11079:SF10 89 175 8.5E-24 T 23-04-2016 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 PANTHER PTHR24423 227 458 7.1E-55 T 23-04-2016 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 SMART SM00388 234 302 8.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 458 2.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 SMART SM00387 348 460 1.5E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 SUPERFAMILY SSF55874 293 460 4.98E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 3.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 Gene3D G3DSA:1.10.287.130 227 287 3.7E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 SUPERFAMILY SSF47384 222 301 3.53E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 2.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 2.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 2.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35965 b54e8c1de1ec1b4fb11ef51a1b2cd930 474 Gene3D G3DSA:3.30.565.10 288 461 5.1E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 SUPERFAMILY SSF48452 517 612 6.95E-93 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 SUPERFAMILY SSF48452 24 480 6.95E-93 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 Pfam PF14322 Starch-binding associating with outer membrane 29 240 3.0E-16 T 23-04-2016 NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 Pfam PF07980 SusD family 292 612 2.0E-36 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 Gene3D G3DSA:1.25.40.10 402 480 3.0E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 Gene3D G3DSA:1.25.40.10 517 534 3.0E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27060 f418a5bf47a2777c0176bf6dd7ed21e1 612 Gene3D G3DSA:1.25.40.10 220 322 3.0E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 Pfam PF04405 Domain of Unknown function (DUF542) 83 133 8.2E-19 T 23-04-2016 IPR019903 Repair of iron centres family NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 74 1.7E-25 T 23-04-2016 IPR018720 Domain of unknown function DUF2249 NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 PANTHER PTHR36438 76 313 1.9E-72 T 23-04-2016 NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 85 307 2.0E-69 T 23-04-2016 IPR019903 Repair of iron centres family NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 PANTHER PTHR36438:SF1 76 313 1.9E-72 T 23-04-2016 NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 Pfam PF01814 Hemerythrin HHE cation binding domain 159 307 1.4E-18 T 23-04-2016 IPR012312 Haemerythrin-like NIAKO_RS20485 a27d1b39534516efc1e6bc64d649718c 316 Gene3D G3DSA:1.20.120.520 162 308 1.1E-21 T 23-04-2016 NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 SUPERFAMILY SSF52540 480 717 1.68E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 PANTHER PTHR10799 86 97 8.7E-157 T 23-04-2016 NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 PANTHER PTHR10799 494 946 8.7E-157 T 23-04-2016 NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 Gene3D G3DSA:3.40.50.300 499 674 4.9E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 SMART SM00490 829 910 2.4E-17 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 Gene3D G3DSA:3.40.50.300 789 948 3.3E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 Pfam PF08455 Bacterial SNF2 helicase associated 177 479 1.5E-11 T 23-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 Pfam PF00271 Helicase conserved C-terminal domain 801 910 3.3E-15 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 SUPERFAMILY SSF52540 718 965 4.66E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 Pfam PF00176 SNF2 family N-terminal domain 525 788 1.1E-56 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS02070 59071b6c3b214300f00e44aae38b3035 966 SMART SM00487 503 685 8.5E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 1.6E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 Pfam PF00672 HAMP domain 163 231 1.2E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 SMART SM00387 350 459 5.1E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 2.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 SUPERFAMILY SSF47384 218 299 8.83E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 Gene3D G3DSA:1.10.287.130 227 286 2.4E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 SUPERFAMILY SSF55874 293 457 2.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 Gene3D G3DSA:3.30.565.10 287 457 2.2E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 SMART SM00388 235 301 7.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS35595 877d50cb4932e3ecc6e9b8911cd6529d 460 PANTHER PTHR24423 174 456 2.4E-57 T 23-04-2016 NIAKO_RS01825 2f36c96ca447e05757a4b2127f9c5ce3 359 SUPERFAMILY SSF52833 210 341 1.61E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS01825 2f36c96ca447e05757a4b2127f9c5ce3 359 Gene3D G3DSA:3.40.30.10 220 352 1.2E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS01825 2f36c96ca447e05757a4b2127f9c5ce3 359 Pfam PF00578 AhpC/TSA family 221 339 1.2E-24 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS01825 2f36c96ca447e05757a4b2127f9c5ce3 359 PANTHER PTHR13871 235 344 8.3E-30 T 23-04-2016 NIAKO_RS01825 2f36c96ca447e05757a4b2127f9c5ce3 359 Pfam PF14289 Domain of unknown function (DUF4369) 16 113 7.4E-15 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 PANTHER PTHR10099:SF2 10 703 4.2E-295 T 23-04-2016 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 SUPERFAMILY SSF56042 567 707 1.64E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 SUPERFAMILY SSF55326 399 565 7.98E-49 T 23-04-2016 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 742 279.448 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Gene3D G3DSA:3.30.1330.10 412 560 1.6E-51 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Gene3D G3DSA:3.30.1330.10 45 190 1.9E-43 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 199 346 4.6E-33 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 571 706 5.3E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 SUPERFAMILY SSF56042 195 424 1.79E-50 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Gene3D G3DSA:3.90.650.10 209 346 3.7E-4 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 PIRSF PIRSF001587 1 735 4.5E-282 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 SUPERFAMILY SSF55326 11 190 3.44E-46 T 23-04-2016 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 PANTHER PTHR10099 10 703 4.2E-295 T 23-04-2016 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 13 731 1.1E-259 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 83 185 4.4E-23 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS23145 454fcd25d92634f40ec78a4601ca465f 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 440 556 2.6E-24 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS29170 bf3cc4f4eb348f8abd42f6717adcfc11 162 PANTHER PTHR18866:SF104 56 162 2.0E-17 T 23-04-2016 NIAKO_RS29170 bf3cc4f4eb348f8abd42f6717adcfc11 162 SUPERFAMILY SSF51230 87 162 5.89E-20 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS29170 bf3cc4f4eb348f8abd42f6717adcfc11 162 Gene3D G3DSA:2.40.50.100 91 162 2.0E-23 T 23-04-2016 NIAKO_RS29170 bf3cc4f4eb348f8abd42f6717adcfc11 162 Pfam PF00364 Biotin-requiring enzyme 94 161 1.1E-15 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS29170 bf3cc4f4eb348f8abd42f6717adcfc11 162 PANTHER PTHR18866 56 162 2.0E-17 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 613 39.584 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 613 1.3E-244 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 SUPERFAMILY SSF53697 248 613 9.0E-120 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 PANTHER PTHR10937 1 613 0.0 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 SUPERFAMILY SSF56235 2 235 6.86E-68 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Gene3D G3DSA:3.40.50.10490 447 613 5.9E-67 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Gene3D G3DSA:3.40.50.10490 246 446 1.0E-76 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Pfam PF01380 SIS domain 466 591 8.0E-25 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Pfam PF01380 SIS domain 293 419 6.4E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Pfam PF13522 Glutamine amidotransferase domain 64 185 5.0E-22 T 23-04-2016 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 PANTHER PTHR10937:SF0 1 613 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NIAKO_RS01645 0829baf42cd513aeb7b4efeb5796f114 613 Gene3D G3DSA:3.60.20.10 2 232 1.9E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219:SF46 554 762 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219:SF46 1107 1245 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219:SF46 783 860 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219 554 762 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219 1107 1245 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 PANTHER PTHR11219 783 860 1.4E-18 T 23-04-2016 NIAKO_RS15030 4c241819961f2eeaf3f031ccbbb214fa 1433 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1147 1235 1.2E-15 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 Gene3D G3DSA:3.40.50.450 114 251 1.9E-11 T 23-04-2016 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 PANTHER PTHR32039 32 366 4.5E-88 T 23-04-2016 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 Pfam PF02481 DNA recombination-mediator protein A 73 279 4.4E-74 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 PANTHER PTHR32039:SF8 32 366 4.5E-88 T 23-04-2016 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 SUPERFAMILY SSF47781 3 61 1.18E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 Gene3D G3DSA:1.10.150.20 9 60 7.3E-11 T 23-04-2016 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 288 1.4E-70 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 SUPERFAMILY SSF102405 83 290 1.53E-33 T 23-04-2016 NIAKO_RS00815 7968b1f35f5d54b60454c3ba626fb47b 367 Pfam PF12826 Helix-hairpin-helix motif 14 60 1.6E-7 T 23-04-2016 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Gene3D G3DSA:3.50.50.60 26 276 7.5E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Gene3D G3DSA:3.50.50.60 429 481 7.5E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 PANTHER PTHR11632 1 668 0.0 T 23-04-2016 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 SUPERFAMILY SSF51905 31 287 3.99E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 SUPERFAMILY SSF51905 437 488 3.99E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 SUPERFAMILY SSF46977 525 667 1.26E-37 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 PANTHER PTHR11632:SF53 1 668 0.0 T 23-04-2016 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Pfam PF00890 FAD binding domain 35 472 2.4E-52 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 5.7E-6 T 23-04-2016 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 436 458 5.7E-6 T 23-04-2016 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Gene3D G3DSA:1.20.58.100 506 622 9.2E-34 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Pfam PF02910 Fumarate reductase flavoprotein C-term 534 667 1.0E-36 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 Gene3D G3DSA:3.90.700.10 277 427 8.9E-16 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 SUPERFAMILY SSF56425 271 434 7.33E-32 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NIAKO_RS04365 06ac0ef23cfa5e5370f9501ba5bf7178 668 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 35 379 5.9E-172 T 23-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 NIAKO_RS00410 e13569499fcebf1c5da466b3ef664435 410 PANTHER PTHR12526 175 399 1.5E-29 T 23-04-2016 NIAKO_RS00410 e13569499fcebf1c5da466b3ef664435 410 Pfam PF00534 Glycosyl transferases group 1 228 388 2.9E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS00410 e13569499fcebf1c5da466b3ef664435 410 SUPERFAMILY SSF53756 24 400 1.78E-47 T 23-04-2016 NIAKO_RS00410 e13569499fcebf1c5da466b3ef664435 410 Gene3D G3DSA:3.40.50.2000 232 386 4.5E-17 T 23-04-2016 NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 PANTHER PTHR24220 16 250 1.0E-93 T 23-04-2016 NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 SUPERFAMILY SSF52540 14 246 1.28E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 Pfam PF00005 ABC transporter 30 179 2.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 PANTHER PTHR24220:SF567 16 250 1.0E-93 T 23-04-2016 NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 SMART SM00382 39 235 5.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS09225 e94a7478947bf8cacc6eb2f39d304de6 263 Gene3D G3DSA:3.40.50.300 11 245 1.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06160 f403d9950983a755c91672b180483e6b 250 PANTHER PTHR11351 3 238 1.5E-38 T 23-04-2016 NIAKO_RS06160 f403d9950983a755c91672b180483e6b 250 PANTHER PTHR11351:SF34 3 238 1.5E-38 T 23-04-2016 NIAKO_RS06160 f403d9950983a755c91672b180483e6b 250 Pfam PF00487 Fatty acid desaturase 3 229 1.2E-18 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 8 322 4.2E-144 T 23-04-2016 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 5.8E-13 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 260 5.8E-13 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.8E-13 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 5.8E-13 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 293 3.5E-102 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 Gene3D G3DSA:3.50.50.60 126 318 1.6E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 Gene3D G3DSA:3.50.50.60 4 125 3.3E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PANTHER PTHR23023:SF55 4 295 4.9E-59 T 23-04-2016 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 SUPERFAMILY SSF51905 1 319 4.75E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 2.9E-16 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.9E-16 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 2.9E-16 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 302 2.9E-16 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 267 2.9E-16 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS22440 432bf05b859082c21832e3678b361611 324 PANTHER PTHR23023 4 295 4.9E-59 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF56935 521 813 6.87E-72 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF56935 980 1061 6.87E-72 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF56935 892 940 6.87E-72 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF56935 342 490 6.87E-72 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF56935 122 274 6.87E-72 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Gene3D G3DSA:2.60.40.1120 42 127 2.3E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 246 1.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Gene3D G3DSA:2.170.130.10 128 249 2.2E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Gene3D G3DSA:2.40.170.20 896 954 1.2E-16 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Gene3D G3DSA:2.40.170.20 340 813 1.2E-16 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532:SF57 540 1059 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532:SF57 10 386 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532:SF57 417 460 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 SUPERFAMILY SSF49464 40 122 7.98E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 40 1061 8.9E-266 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 223 252 3.8E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532 540 1059 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532 10 386 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 PANTHER PTHR11532 417 460 2.0E-256 T 23-04-2016 NIAKO_RS11990 7d24e16ef8f9268883c6ccecc39bbc9a 1061 Pfam PF13715 CarboxypepD_reg-like domain 42 124 3.4E-14 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532:SF51 1 431 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.170.130.10 76 208 2.1E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.40.170.20 442 792 6.3E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.40.170.20 209 251 6.3E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.40.170.20 942 1044 6.3E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.40.170.20 316 400 6.3E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.40.170.20 838 881 6.3E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532:SF51 573 1042 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Pfam PF13715 CarboxypepD_reg-like domain 1 78 4.8E-11 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 184 214 1.0E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532:SF51 516 544 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532 573 1042 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532 516 544 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 208 4.4E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF49464 1 70 2.88E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 1 1044 3.6E-169 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 PANTHER PTHR11532 1 431 6.9E-127 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF56935 447 792 1.79E-74 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF56935 307 396 1.79E-74 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF56935 856 891 1.79E-74 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF56935 75 231 1.79E-74 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 SUPERFAMILY SSF56935 951 1044 1.79E-74 T 23-04-2016 NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Gene3D G3DSA:2.60.40.1120 1 56 1.0E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35090 ffe97b97c9b5059d7444f953bcf33964 1044 Pfam PF14905 Outer membrane protein beta-barrel family 693 793 3.1E-9 T 23-04-2016 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 Gene3D G3DSA:3.90.180.10 6 181 4.8E-46 T 23-04-2016 IPR011032 GroES-like NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 SUPERFAMILY SSF50129 3 156 3.04E-38 T 23-04-2016 IPR011032 GroES-like NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 SUPERFAMILY SSF51735 130 262 1.52E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 Pfam PF13602 Zinc-binding dehydrogenase 214 334 3.0E-23 T 23-04-2016 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 104 3.7E-9 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 172 193 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 PANTHER PTHR11695 21 155 8.4E-83 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 PANTHER PTHR11695 172 337 8.4E-83 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 SMART SM00829 16 334 1.9E-14 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS12190 50fbf25d8be8afb7896a6deb83ec493d 337 Gene3D G3DSA:3.40.50.720 182 308 5.3E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28535 ba60bb94f9d517189dabad957fcd5dbb 229 Pfam PF04298 Putative neutral zinc metallopeptidase 6 222 1.2E-88 T 23-04-2016 IPR007395 Putative neutral zinc metallopeptidase NIAKO_RS28535 ba60bb94f9d517189dabad957fcd5dbb 229 PANTHER PTHR36434 1 229 6.1E-96 T 23-04-2016 NIAKO_RS32200 60a68ad4827ab0dddd7edc8f73338839 298 Gene3D G3DSA:3.90.550.10 20 133 2.4E-5 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS32200 60a68ad4827ab0dddd7edc8f73338839 298 SUPERFAMILY SSF53448 19 154 7.73E-10 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS32200 60a68ad4827ab0dddd7edc8f73338839 298 Pfam PF13704 Glycosyl transferase family 2 28 105 1.2E-6 T 23-04-2016 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 Pfam PF00072 Response regulator receiver domain 6 110 8.8E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 Gene3D G3DSA:3.40.50.2300 1 113 5.7E-24 T 23-04-2016 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 SMART SM00448 2 110 8.5E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 Pfam PF04397 LytTr DNA-binding domain 144 231 8.5E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 SMART SM00850 141 232 2.4E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 Gene3D G3DSA:2.40.50.40 134 201 1.1E-19 T 23-04-2016 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 PANTHER PTHR26402 2 110 7.3E-24 T 23-04-2016 NIAKO_RS29325 860b5ef82eef460cf1780e010bb27b62 234 SUPERFAMILY SSF52172 1 114 7.4E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 Pfam PF02321 Outer membrane efflux protein 32 223 1.9E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 Pfam PF02321 Outer membrane efflux protein 252 433 1.9E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 PANTHER PTHR30026 1 444 8.8E-50 T 23-04-2016 NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 Gene3D G3DSA:1.20.1600.10 28 445 2.4E-72 T 23-04-2016 NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 PANTHER PTHR30026:SF4 1 444 8.8E-50 T 23-04-2016 NIAKO_RS05905 01dcf1c791d6841e2a513552b77f03d6 448 SUPERFAMILY SSF56954 5 445 9.02E-72 T 23-04-2016 NIAKO_RS32715 f32ca7f5bd5706268927a5f2164f67d1 285 SUPERFAMILY SSF50969 49 263 5.96E-12 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS32715 f32ca7f5bd5706268927a5f2164f67d1 285 Gene3D G3DSA:2.130.10.10 203 264 4.7E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS32715 f32ca7f5bd5706268927a5f2164f67d1 285 Gene3D G3DSA:2.130.10.10 46 136 4.7E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS32715 f32ca7f5bd5706268927a5f2164f67d1 285 Pfam PF06977 SdiA-regulated 51 265 1.6E-8 T 23-04-2016 IPR009722 SdiA-regulated NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 PANTHER PTHR24423:SF518 177 383 1.2E-28 T 23-04-2016 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 SUPERFAMILY SSF55785 190 300 5.39E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 PANTHER PTHR24423 177 383 1.2E-28 T 23-04-2016 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 298 4.0E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 Gene3D G3DSA:1.10.287.130 314 383 4.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 SMART SM00388 322 390 8.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 SUPERFAMILY SSF47384 308 383 3.73E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 SMART SM00091 179 245 3.0E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 Gene3D G3DSA:3.30.450.20 182 289 3.3E-14 T 23-04-2016 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 Pfam PF00989 PAS fold 182 288 2.5E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS12295 ac02503f776a1992d5da3295f16d6565 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 324 383 2.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.9E-22 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 147 1.1E-20 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.5E-37 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 Gene3D G3DSA:3.10.430.100 62 148 1.7E-20 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 PANTHER PTHR21368 1 148 5.1E-40 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 SUPERFAMILY SSF55658 1 57 6.63E-19 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.717 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 Gene3D G3DSA:3.40.5.10 1 52 7.5E-25 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal NIAKO_RS25185 c0026e5bf7526c104ecb506ccdd2f4b0 148 SUPERFAMILY SSF55653 56 146 6.8E-18 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 3 498 14.167 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 86 469 4.4E-64 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 PANTHER PTHR23088:SF29 230 469 6.3E-35 T 23-04-2016 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 Pfam PF00795 Carbon-nitrogen hydrolase 246 448 4.0E-17 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 PANTHER PTHR23088 230 469 6.3E-35 T 23-04-2016 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 SUPERFAMILY SSF56317 242 491 2.09E-27 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS06625 e68671ded083b7912ff74d1fdd2e8cdf 514 Gene3D G3DSA:3.60.110.10 239 469 8.8E-20 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS32020 809630dc72cf44d8576ea5867f1155b9 151 Gene3D G3DSA:3.30.565.10 20 143 7.8E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32020 809630dc72cf44d8576ea5867f1155b9 151 SUPERFAMILY SSF55874 12 143 2.15E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 SUPERFAMILY SSF103088 549 651 8.5E-23 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 PANTHER PTHR30128 549 649 1.1E-19 T 23-04-2016 NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Gene3D G3DSA:3.30.1330.60 545 652 1.1E-23 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Gene3D G3DSA:2.60.40.1120 448 494 5.5E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Gene3D G3DSA:1.25.40.10 26 149 1.6E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 SUPERFAMILY SSF49464 448 512 6.08E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Pfam PF00691 OmpA family 549 635 3.4E-12 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 SUPERFAMILY SSF48452 25 51 2.66E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 SUPERFAMILY SSF48452 78 150 2.66E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 SUPERFAMILY SSF82171 190 384 5.49E-11 T 23-04-2016 NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Gene3D G3DSA:2.120.10.30 179 376 5.1E-14 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 245 260 0.041 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 291 328 3.5E-7 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 345 382 0.068 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS22340 d46f6db81b1ec9148c61f4e7bf89400e 672 Pfam PF07676 WD40-like Beta Propeller Repeat 187 219 0.046 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS37495 9a7bc3b6bbfcb3e6e049d33d8796a037 127 PANTHER PTHR37299 17 115 2.0E-12 T 23-04-2016 NIAKO_RS37495 9a7bc3b6bbfcb3e6e049d33d8796a037 127 SMART SM00850 12 105 1.0E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS37495 9a7bc3b6bbfcb3e6e049d33d8796a037 127 Pfam PF04397 LytTr DNA-binding domain 14 103 4.2E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS37495 9a7bc3b6bbfcb3e6e049d33d8796a037 127 Gene3D G3DSA:2.40.50.40 3 72 5.1E-21 T 23-04-2016 NIAKO_RS37495 9a7bc3b6bbfcb3e6e049d33d8796a037 127 PANTHER PTHR37299:SF1 17 115 2.0E-12 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 385 38.785 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Gene3D G3DSA:1.10.287.110 1 97 3.6E-35 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Gene3D G3DSA:2.60.260.20 224 268 3.3E-14 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Gene3D G3DSA:2.60.260.20 117 150 3.3E-14 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PANTHER PTHR24078:SF190 1 385 7.2E-143 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Pfam PF01556 DnaJ C terminal domain 131 347 1.1E-34 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SUPERFAMILY SSF49493 125 165 2.22E-13 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SUPERFAMILY SSF49493 228 271 2.22E-13 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SUPERFAMILY SSF49493 274 358 2.22E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PRINTS PR00625 DnaJ domain signature 62 81 1.6E-32 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PRINTS PR00625 DnaJ domain signature 7 25 1.6E-32 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PRINTS PR00625 DnaJ domain signature 25 40 1.6E-32 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PRINTS PR00625 DnaJ domain signature 42 62 1.6E-32 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SUPERFAMILY SSF46565 1 113 3.53E-36 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 363 9.5E-132 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Pfam PF00226 DnaJ domain 5 67 1.5E-27 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SUPERFAMILY SSF57938 144 224 3.14E-18 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Gene3D G3DSA:2.60.260.20 270 348 1.3E-19 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Pfam PF00684 DnaJ central domain 157 221 6.7E-13 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 Gene3D G3DSA:2.10.230.10 151 223 2.0E-19 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 PANTHER PTHR24078 1 385 7.2E-143 T 23-04-2016 NIAKO_RS27075 ede7db323a56445e8e9756ec6dbddbda 387 SMART SM00271 4 62 1.0E-31 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 PANTHER PTHR24567 13 193 1.8E-18 T 23-04-2016 NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 SMART SM00100 12 131 6.2E-5 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 SUPERFAMILY SSF51206 9 140 1.96E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 Pfam PF00027 Cyclic nucleotide-binding domain 32 111 3.9E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 Gene3D G3DSA:1.10.10.10 158 190 4.9E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 Gene3D G3DSA:2.60.120.10 5 128 4.9E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS05240 fa6a6459437c9f27dc119b8b26741f0a 193 PANTHER PTHR24567:SF33 13 193 1.8E-18 T 23-04-2016 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 PANTHER PTHR24567 25 226 7.5E-41 T 23-04-2016 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 SUPERFAMILY SSF51206 9 146 4.84E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 PANTHER PTHR24567:SF32 25 226 7.5E-41 T 23-04-2016 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 Gene3D G3DSA:2.60.120.10 20 146 6.6E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 5.0E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 SMART SM00419 168 216 1.0E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 SMART SM00100 13 131 1.3E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 Pfam PF13545 Crp-like helix-turn-helix domain 152 222 5.7E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 SUPERFAMILY SSF46785 149 225 9.83E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 9.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 9.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS29335 051921120b152ac5e0d6cf23a5bc7758 230 Gene3D G3DSA:1.10.10.10 149 225 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20255 073721e6bccc0cf986b912aa94802a22 150 PANTHER PTHR19372 1 146 1.8E-19 T 23-04-2016 NIAKO_RS20255 073721e6bccc0cf986b912aa94802a22 150 SUPERFAMILY SSF81296 25 140 2.87E-31 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS20255 073721e6bccc0cf986b912aa94802a22 150 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 23 129 5.2E-15 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NIAKO_RS20255 073721e6bccc0cf986b912aa94802a22 150 Gene3D G3DSA:2.60.40.650 25 136 1.7E-28 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NIAKO_RS20255 073721e6bccc0cf986b912aa94802a22 150 PANTHER PTHR19372:SF2 1 146 1.8E-19 T 23-04-2016 NIAKO_RS04385 89ccb322ca4562d8d508410c79056045 240 Pfam PF08242 Methyltransferase domain 46 145 7.2E-11 T 23-04-2016 IPR013217 Methyltransferase type 12 NIAKO_RS04385 89ccb322ca4562d8d508410c79056045 240 SUPERFAMILY SSF53335 6 223 7.63E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04385 89ccb322ca4562d8d508410c79056045 240 Gene3D G3DSA:3.40.50.150 12 152 1.8E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04385 89ccb322ca4562d8d508410c79056045 240 Gene3D G3DSA:3.40.50.150 199 222 1.8E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 Gene3D G3DSA:2.130.10.130 384 617 6.8E-15 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 330 393 3.9E-9 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 495 558 2.7E-8 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 SUPERFAMILY SSF56219 53 302 1.44E-28 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 PANTHER PTHR12121:SF36 61 303 1.2E-20 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 PANTHER PTHR12121 61 303 1.2E-20 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 65 296 9.5E-13 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 SUPERFAMILY SSF69318 324 620 6.71E-33 T 23-04-2016 NIAKO_RS00335 bf7d0c6c86a07effca3e2d7451984415 630 Gene3D G3DSA:3.60.10.10 62 301 2.3E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 Gene3D G3DSA:3.40.50.720 3 176 7.7E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 SUPERFAMILY SSF51735 2 327 1.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 Gene3D G3DSA:3.90.25.10 177 308 2.5E-34 T 23-04-2016 NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 PANTHER PTHR10366:SF469 6 326 1.2E-81 T 23-04-2016 NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 PANTHER PTHR10366 6 326 1.2E-81 T 23-04-2016 NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 242 1.5E-36 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS23140 f658fd3c88425e35867c87abf3917987 332 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 7 326 7.7E-114 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 Gene3D G3DSA:3.30.360.10 405 459 3.2E-24 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 Gene3D G3DSA:3.30.360.10 195 347 3.2E-24 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 32 2.7E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 54 173 1.8E-17 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604:SF122 376 465 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604:SF122 2 208 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604:SF122 226 355 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 Gene3D G3DSA:3.40.50.720 47 194 8.1E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604 376 465 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604 2 208 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 PANTHER PTHR22604 226 355 3.0E-67 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 SUPERFAMILY SSF51735 41 206 5.31E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 SUPERFAMILY SSF55347 240 353 2.18E-20 T 23-04-2016 NIAKO_RS24810 fbf4e580508ee2103aaf271fd44766b4 467 SUPERFAMILY SSF55347 181 208 2.18E-20 T 23-04-2016 NIAKO_RS35370 f4bec45467a67d046d527096d743f88d 424 SUPERFAMILY SSF56601 34 416 1.51E-85 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS35370 f4bec45467a67d046d527096d743f88d 424 Gene3D G3DSA:3.40.710.10 32 417 2.4E-87 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS35370 f4bec45467a67d046d527096d743f88d 424 PANTHER PTHR22935 1 402 2.9E-92 T 23-04-2016 NIAKO_RS35370 f4bec45467a67d046d527096d743f88d 424 PANTHER PTHR22935:SF77 1 402 2.9E-92 T 23-04-2016 NIAKO_RS35370 f4bec45467a67d046d527096d743f88d 424 Pfam PF00144 Beta-lactamase 40 402 3.5E-69 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.170.130.10 128 238 1.8E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532 487 794 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532 9 414 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532 823 1026 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 SUPERFAMILY SSF56935 116 258 9.61E-93 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 SUPERFAMILY SSF56935 937 1028 9.61E-93 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 SUPERFAMILY SSF56935 303 754 9.61E-93 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 SUPERFAMILY SSF56935 854 897 9.61E-93 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.40.170.20 947 1028 2.5E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.40.170.20 284 776 2.5E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.40.170.20 862 912 2.5E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.40.170.20 239 246 2.5E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 234 8.8E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 SUPERFAMILY SSF49464 38 132 5.76E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 38 1028 2.5E-249 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Pfam PF13715 CarboxypepD_reg-like domain 39 120 1.8E-16 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 Gene3D G3DSA:2.60.40.1120 38 127 1.9E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532:SF57 487 794 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532:SF57 9 414 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 PANTHER PTHR11532:SF57 823 1026 6.5E-237 T 23-04-2016 NIAKO_RS26430 615dc2c1a85df588626ba13f8764eaa9 1028 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 210 240 6.1E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.3E-34 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Gene3D G3DSA:3.30.2090.10 712 803 1.9E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82866 291 490 1.31E-38 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Gene3D G3DSA:1.10.3850.10 811 1024 2.6E-52 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Gene3D G3DSA:1.10.3850.10 276 492 1.8E-52 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82714 184 265 2.09E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82866 806 1028 7.98E-42 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Gene3D G3DSA:3.30.2090.10 184 265 1.6E-8 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1023 2.0E-196 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82693 136 182 2.79E-16 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82693 268 324 2.79E-16 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82714 713 803 1.57E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 SUPERFAMILY SSF82693 41 134 2.62E-19 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PANTHER PTHR32063 1 1023 1.5E-250 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 Gene3D G3DSA:3.30.70.1430 41 139 1.7E-17 T 23-04-2016 NIAKO_RS23760 bf0f06748b3d6461597e3307105897b3 1046 PANTHER PTHR32063:SF8 1 1023 1.5E-250 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 Gene3D G3DSA:3.30.2080.10 604 749 7.7E-65 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 Pfam PF07971 Glycosyl hydrolase family 92 241 738 7.1E-168 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 4 743 7.3E-243 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 PANTHER PTHR12143:SF22 1 757 0.0 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 PANTHER PTHR12143 1 757 0.0 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 Gene3D G3DSA:1.20.1610.10 444 603 1.1E-64 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 Gene3D G3DSA:2.70.98.10 26 324 5.0E-103 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 Gene3D G3DSA:1.20.1050.60 351 438 5.8E-34 T 23-04-2016 NIAKO_RS00945 2ececa9304cce18592fe03834b915386 763 SUPERFAMILY SSF48208 266 727 1.21E-31 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 PANTHER PTHR33886 1 398 7.5E-157 T 23-04-2016 NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 SUPERFAMILY SSF52317 442 615 2.98E-9 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 Gene3D G3DSA:3.40.50.880 434 539 2.6E-4 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 Gene3D G3DSA:1.50.10.10 35 398 3.0E-122 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 Pfam PF07470 Glycosyl Hydrolase Family 88 54 398 6.4E-96 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 PANTHER PTHR33886:SF3 1 398 7.5E-157 T 23-04-2016 NIAKO_RS26035 77ae4695fb8aba3c48d661900bd72ddf 646 SUPERFAMILY SSF48208 58 398 8.75E-73 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 SUPERFAMILY SSF48452 453 542 3.67E-76 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 SUPERFAMILY SSF48452 5 419 3.67E-76 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 Gene3D G3DSA:1.25.40.10 451 469 3.4E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 Gene3D G3DSA:1.25.40.10 188 289 3.4E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 Gene3D G3DSA:1.25.40.10 357 419 3.4E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 Pfam PF14322 Starch-binding associating with outer membrane 12 207 1.3E-16 T 23-04-2016 NIAKO_RS19685 17b246d441ee6e7893ab37d8f31b3f91 544 Pfam PF07980 SusD family 250 542 6.3E-28 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:3.30.70.1430 38 140 1.5E-26 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:3.30.70.1430 572 673 1.1E-26 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82693 570 673 2.93E-25 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PANTHER PTHR32063:SF9 1 1052 0.0 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:1.10.3850.10 817 1031 9.3E-49 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82866 810 1035 8.89E-41 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82866 297 499 1.96E-51 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82693 275 332 1.55E-22 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82693 135 182 1.55E-22 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 3.8E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 2.7E-301 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:3.30.2090.10 182 274 2.6E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82693 38 127 1.57E-20 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:3.30.2090.10 725 811 1.6E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 PANTHER PTHR32063 1 1052 0.0 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 Gene3D G3DSA:1.20.1640.10 294 508 8.1E-63 T 23-04-2016 NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82714 183 272 4.19E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS13835 5f12f3f8fc6a8434c59b80e2239f84bc 1055 SUPERFAMILY SSF82714 725 810 4.84E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532 824 1023 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532 144 445 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532 519 804 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 Gene3D G3DSA:2.40.170.20 267 286 3.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 Gene3D G3DSA:2.40.170.20 876 1023 3.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 Gene3D G3DSA:2.40.170.20 339 815 3.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 Gene3D G3DSA:2.170.130.10 148 266 1.1E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 144 1024 3.0E-182 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532:SF57 824 1023 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532:SF57 144 445 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 PANTHER PTHR11532:SF57 519 804 4.2E-165 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 Pfam PF07715 TonB-dependent Receptor Plug Domain 162 266 1.6E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 242 272 2.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 SUPERFAMILY SSF56935 148 290 1.6E-79 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 SUPERFAMILY SSF56935 867 1023 1.6E-79 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 SUPERFAMILY SSF56935 330 419 1.6E-79 T 23-04-2016 NIAKO_RS18185 f7833fc75bc0445563f76052e7b202f2 1025 SUPERFAMILY SSF56935 448 794 1.6E-79 T 23-04-2016 NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 PANTHER PTHR40112:SF1 1 112 1.2E-25 T 23-04-2016 NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 PANTHER PTHR40112 1 112 1.2E-25 T 23-04-2016 NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 Gene3D G3DSA:2.60.120.10 4 111 2.0E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 Pfam PF07883 Cupin domain 41 92 9.1E-11 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 PIRSF PIRSF029883 6 112 2.9E-34 T 23-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 NIAKO_RS25675 fc27e14e1584fb81f0774a2430fa81c3 112 SUPERFAMILY SSF51182 10 108 1.15E-18 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Gene3D G3DSA:3.30.1490.20 129 201 8.0E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 6.7E-79 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 SUPERFAMILY SSF56059 82 347 3.01E-67 T 23-04-2016 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 2.8E-193 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Gene3D G3DSA:3.30.470.20 203 444 4.6E-98 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 SMART SM00878 335 441 1.9E-53 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 PANTHER PTHR18866 1 472 3.6E-279 T 23-04-2016 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Gene3D G3DSA:3.40.50.20 2 128 1.8E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 SUPERFAMILY SSF52440 2 112 7.19E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 3.1E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 SUPERFAMILY SSF51246 330 444 1.46E-40 T 23-04-2016 IPR011054 Rudiment single hybrid motif NIAKO_RS29175 b143aebb7a9225cd87766a7e0d90a391 488 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.8E-44 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 Gene3D G3DSA:2.120.10.30 269 499 2.6E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 PANTHER PTHR32438 207 510 3.9E-16 T 23-04-2016 NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 Pfam PF13004 Putative binding domain, N-terminal 78 136 1.5E-5 T 23-04-2016 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal KEGG: 00040+3.2.1.15|KEGG: 00500+3.2.1.15|MetaCyc: PWY-1081|UniPathway: UPA00326 NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 PANTHER PTHR32438:SF6 207 510 3.9E-16 T 23-04-2016 NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 Pfam PF07995 Glucose / Sorbosone dehydrogenase 192 333 8.5E-5 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NIAKO_RS22730 ba4ef0ba25ae329eee44b497cb3ec654 523 SUPERFAMILY SSF50998 185 501 4.16E-10 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PANTHER PTHR22912 6 293 2.0E-76 T 23-04-2016 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 284 3.8E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 Gene3D G3DSA:3.50.50.60 131 228 6.4E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 1.1E-15 T 23-04-2016 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.1E-15 T 23-04-2016 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-15 T 23-04-2016 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-15 T 23-04-2016 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 SUPERFAMILY SSF51905 4 299 9.72E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 1.4E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.4E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.4E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 1.4E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 279 1.4E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 Gene3D G3DSA:3.50.50.60 250 298 5.0E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 Gene3D G3DSA:3.50.50.60 6 130 5.0E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13530 7675009e820f0f78f5271c307a78992c 302 PANTHER PTHR22912:SF159 6 293 2.0E-76 T 23-04-2016 NIAKO_RS09255 c5653ccadc2b6d9567c685c7a72a4084 144 SUPERFAMILY SSF49764 13 134 8.72E-36 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS09255 c5653ccadc2b6d9567c685c7a72a4084 144 PANTHER PTHR11527 16 144 4.6E-35 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS09255 c5653ccadc2b6d9567c685c7a72a4084 144 PANTHER PTHR11527:SF122 16 144 4.6E-35 T 23-04-2016 NIAKO_RS09255 c5653ccadc2b6d9567c685c7a72a4084 144 Pfam PF00011 Hsp20/alpha crystallin family 41 143 2.0E-26 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS09255 c5653ccadc2b6d9567c685c7a72a4084 144 Gene3D G3DSA:2.60.40.790 4 143 2.1E-40 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SUPERFAMILY SSF48452 35 342 2.28E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Pfam PF13432 Tetratricopeptide repeat 386 442 9.5E-6 T 23-04-2016 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Gene3D G3DSA:1.25.40.10 47 290 1.4E-41 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 240 273 1.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 102 135 22.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 274 307 0.23 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 206 239 0.0097 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 410 443 10.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 342 375 0.0011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 376 409 360.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 68 101 60.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 138 171 62.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SMART SM00028 308 341 11.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Pfam PF13176 Tetratricopeptide repeat 242 274 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 288 367 4.0E-7 T 23-04-2016 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Gene3D G3DSA:1.25.40.10 291 357 3.9E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 Gene3D G3DSA:1.25.40.10 358 443 8.3E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 SUPERFAMILY SSF48452 342 445 3.54E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23110 47b097db941c039ee7600382e6ce9742 471 PANTHER PTHR23083 42 442 6.4E-57 T 23-04-2016 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Gene3D G3DSA:2.40.50.100 2 93 1.5E-22 T 23-04-2016 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 SUPERFAMILY SSF51230 2 92 3.02E-22 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 SUPERFAMILY SSF52777 174 402 1.96E-89 T 23-04-2016 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Gene3D G3DSA:4.10.320.10 117 160 5.1E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Gene3D G3DSA:3.30.559.10 168 401 5.5E-93 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Pfam PF00364 Biotin-requiring enzyme 3 74 7.5E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 PANTHER PTHR23151:SF47 1 402 2.9E-196 T 23-04-2016 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Pfam PF02817 e3 binding domain 120 155 2.2E-7 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 2 402 1.4E-157 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 PANTHER PTHR23151 1 402 2.9E-196 T 23-04-2016 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 SUPERFAMILY SSF47005 117 159 9.16E-8 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS24765 00340c4aa58deeb1b7fabed783f4b5ae 413 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 401 4.2E-83 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 Gene3D G3DSA:1.10.1040.20 155 251 1.6E-29 T 23-04-2016 IPR018931 Domain of unknown function DUF2520 NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 Gene3D G3DSA:3.40.50.720 2 150 3.6E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 2.2E-14 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 SUPERFAMILY SSF51735 2 155 5.88E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 Pfam PF10728 Domain of unknown function (DUF2520) 123 247 1.6E-28 T 23-04-2016 IPR018931 Domain of unknown function DUF2520 NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 PANTHER PTHR40459:SF1 1 243 1.6E-16 T 23-04-2016 NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 PANTHER PTHR40459 1 243 1.6E-16 T 23-04-2016 NIAKO_RS07430 319368c5933ad71ad23a49d4d6779cd2 254 SUPERFAMILY SSF48179 157 252 1.46E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 SUPERFAMILY SSF88659 108 168 3.74E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 SUPERFAMILY SSF88946 2 90 1.88E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 PANTHER PTHR30173:SF20 2 178 1.7E-43 T 23-04-2016 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 Pfam PF04542 Sigma-70 region 2 15 78 3.7E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 166 3.1E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 Gene3D G3DSA:1.10.10.10 107 168 1.5E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 Gene3D G3DSA:1.10.1740.10 2 106 8.1E-21 T 23-04-2016 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 Pfam PF08281 Sigma-70, region 4 113 160 1.3E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 PANTHER PTHR30173 2 178 1.7E-43 T 23-04-2016 NIAKO_RS20430 bb617b6d8a336c8f73224d0fc7691551 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 10 166 9.7E-43 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 PANTHER PTHR11510:SF5 11 421 5.6E-126 T 23-04-2016 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 PIRSF PIRSF015578 1 433 3.9E-118 T 23-04-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 Pfam PF07994 Myo-inositol-1-phosphate synthase 12 418 6.7E-102 T 23-04-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 Pfam PF01658 Myo-inositol-1-phosphate synthase 246 358 1.3E-29 T 23-04-2016 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 SUPERFAMILY SSF55347 245 355 2.22E-36 T 23-04-2016 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 SUPERFAMILY SSF51735 356 421 2.52E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 SUPERFAMILY SSF51735 9 244 2.52E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 Gene3D G3DSA:3.30.360.10 247 356 2.9E-33 T 23-04-2016 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 PANTHER PTHR11510 11 421 5.6E-126 T 23-04-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 Gene3D G3DSA:3.40.50.720 357 420 1.2E-105 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06345 27b56147bc3d8a743fdf7b3c4eff8340 441 Gene3D G3DSA:3.40.50.720 12 246 1.2E-105 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06990 4275ccf0f32c166a30f44e3317747ca9 174 PANTHER PTHR13887 12 169 3.8E-41 T 23-04-2016 NIAKO_RS06990 4275ccf0f32c166a30f44e3317747ca9 174 SUPERFAMILY SSF52833 7 169 3.85E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06990 4275ccf0f32c166a30f44e3317747ca9 174 Gene3D G3DSA:3.40.30.10 7 169 1.6E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06990 4275ccf0f32c166a30f44e3317747ca9 174 Pfam PF13462 Thioredoxin 8 169 3.1E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 PANTHER PTHR22769:SF33 1 203 8.8E-36 T 23-04-2016 NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 PANTHER PTHR22769 1 203 8.8E-36 T 23-04-2016 NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 Pfam PF00293 NUDIX domain 12 126 5.1E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 Gene3D G3DSA:1.10.10.10 142 220 1.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 Gene3D G3DSA:3.90.79.10 5 137 4.4E-40 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 SUPERFAMILY SSF46785 149 218 1.09E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21570 8071d520459e1708083973ed3194bf54 234 SUPERFAMILY SSF55811 5 144 2.3E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 PANTHER PTHR30173:SF24 1 187 1.5E-33 T 23-04-2016 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 Gene3D G3DSA:1.10.10.10 120 185 4.2E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 Pfam PF08281 Sigma-70, region 4 127 179 2.3E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 Pfam PF04542 Sigma-70 region 2 30 95 1.1E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 Gene3D G3DSA:1.10.1740.10 6 114 6.7E-21 T 23-04-2016 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 PANTHER PTHR30173 1 187 1.5E-33 T 23-04-2016 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 SUPERFAMILY SSF88659 109 185 5.23E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 SUPERFAMILY SSF88946 5 112 6.67E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19390 8429616f218341b65ddb3b833c1a4db2 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 180 8.6E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03860 6cd28d998e4aa4d9b39479a376d6d8aa 408 Gene3D G3DSA:2.40.160.10 52 254 6.0E-10 T 23-04-2016 IPR023614 Porin domain NIAKO_RS03860 6cd28d998e4aa4d9b39479a376d6d8aa 408 SUPERFAMILY SSF56935 55 408 1.81E-12 T 23-04-2016 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 410 3.5E-226 T 23-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 SUPERFAMILY SSF53659 2 409 1.61E-157 T 23-04-2016 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 Gene3D G3DSA:3.40.718.10 3 409 1.2E-180 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 SMART SM01329 10 401 5.0E-139 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 PANTHER PTHR11822 1 411 0.0 T 23-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 271 290 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 400 5.2E-77 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS21430 ba2a3aff0193470796060ded41e6335c 411 PIRSF PIRSF000108 1 411 3.1E-232 T 23-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NIAKO_RS34210 baa686a3ea0586b2e480e1ed4444d0c2 123 SMART SM00883 11 115 1.2E-4 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS34210 baa686a3ea0586b2e480e1ed4444d0c2 123 SUPERFAMILY SSF50129 10 116 7.42E-15 T 23-04-2016 IPR011032 GroES-like NIAKO_RS34210 baa686a3ea0586b2e480e1ed4444d0c2 123 Pfam PF00166 Chaperonin 10 Kd subunit 12 115 3.1E-11 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS34210 baa686a3ea0586b2e480e1ed4444d0c2 123 Gene3D G3DSA:2.30.33.40 10 115 4.9E-18 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 SUPERFAMILY SSF46689 230 280 1.68E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 SUPERFAMILY SSF46689 180 227 1.7E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 Gene3D G3DSA:1.10.10.60 231 279 1.1E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 SMART SM00342 194 277 2.5E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 PANTHER PTHR11019 176 285 3.6E-29 T 23-04-2016 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 Pfam PF12833 Helix-turn-helix domain 201 279 1.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35835 abe3f79e4dd865d68af56dd9db5486ef 286 Gene3D G3DSA:1.10.10.60 176 230 2.4E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01030 dc83e564bbea21e74d70387d4610cb91 177 Pfam PF08309 LVIVD repeat 61 88 0.01 T 23-04-2016 IPR013211 LVIVD NIAKO_RS01030 dc83e564bbea21e74d70387d4610cb91 177 Pfam PF08309 LVIVD repeat 103 132 6.9E-4 T 23-04-2016 IPR013211 LVIVD NIAKO_RS17050 4125f39940d575bfd02278a6805935e3 334 Gene3D G3DSA:3.20.20.100 3 325 4.4E-109 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS17050 4125f39940d575bfd02278a6805935e3 334 PANTHER PTHR11732:SF225 3 331 1.6E-134 T 23-04-2016 NIAKO_RS17050 4125f39940d575bfd02278a6805935e3 334 PANTHER PTHR11732 3 331 1.6E-134 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS17050 4125f39940d575bfd02278a6805935e3 334 SUPERFAMILY SSF51430 4 314 9.82E-95 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS17050 4125f39940d575bfd02278a6805935e3 334 Pfam PF00248 Aldo/keto reductase family 22 314 2.5E-77 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS16180 1bfa53ffb527e80d90125a8e6033c8a6 184 Pfam PF04264 YceI-like domain 52 177 4.8E-12 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS16180 1bfa53ffb527e80d90125a8e6033c8a6 184 SUPERFAMILY SSF101874 41 178 2.49E-19 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS16180 1bfa53ffb527e80d90125a8e6033c8a6 184 Gene3D G3DSA:2.40.128.110 55 178 1.6E-14 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 PANTHER PTHR30273:SF2 4 106 4.1E-65 T 23-04-2016 NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 PANTHER PTHR30273:SF2 170 372 4.1E-65 T 23-04-2016 NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 Pfam PF04773 FecR protein 168 263 3.5E-20 T 23-04-2016 IPR006860 FecR protein NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 PANTHER PTHR30273 4 106 4.1E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 PANTHER PTHR30273 170 372 4.1E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS31445 051a47b46927c669f230a24e89b1a53c 372 Pfam PF16344 Domain of unknown function (DUF4974) 273 367 8.1E-16 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF00400 WD domain, G-beta repeat 450 480 0.01 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF00400 WD domain, G-beta repeat 409 442 0.005 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF00400 WD domain, G-beta repeat 249 283 0.063 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF00400 WD domain, G-beta repeat 326 362 1.1E-4 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF00400 WD domain, G-beta repeat 212 243 0.17 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SUPERFAMILY SSF50978 209 481 9.77E-45 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 PANTHER PTHR22844 214 369 3.8E-47 T 23-04-2016 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 PANTHER PTHR22844 409 482 3.8E-47 T 23-04-2016 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 444 481 0.015 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 405 442 6.2E-5 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 284 322 0.11 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 365 403 13.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 245 283 0.013 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 324 362 3.1E-6 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00320 205 243 0.54 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 SMART SM00702 16 199 8.7E-7 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Gene3D G3DSA:2.130.10.10 207 482 4.6E-51 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 3.6E-11 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 468 482 - T 23-04-2016 IPR019775 WD40 repeat, conserved site NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 429 443 - T 23-04-2016 IPR019775 WD40 repeat, conserved site NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 PRINTS PR00320 G protein beta WD-40 repeat signature 349 363 1.4E-7 T 23-04-2016 IPR020472 G-protein beta WD-40 repeat NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 PRINTS PR00320 G protein beta WD-40 repeat signature 468 482 1.4E-7 T 23-04-2016 IPR020472 G-protein beta WD-40 repeat NIAKO_RS09520 be0d63b631122451ba718658deee57ad 482 PRINTS PR00320 G protein beta WD-40 repeat signature 429 443 1.4E-7 T 23-04-2016 IPR020472 G-protein beta WD-40 repeat NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 SUPERFAMILY SSF56349 123 397 5.89E-36 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 Pfam PF13102 Phage integrase SAM-like domain 16 176 2.7E-13 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 PANTHER PTHR30349 41 415 4.4E-63 T 23-04-2016 NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 Gene3D G3DSA:1.10.150.130 123 212 3.6E-4 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 Pfam PF00589 Phage integrase family 225 389 1.2E-14 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 PANTHER PTHR30349:SF26 41 415 4.4E-63 T 23-04-2016 NIAKO_RS19115 116968f114c0622b35b7fa1c7292def6 415 Gene3D G3DSA:1.10.443.10 224 403 2.0E-25 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 PANTHER PTHR21485 1 241 2.4E-73 T 23-04-2016 NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 SUPERFAMILY SSF53448 1 240 1.53E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 PANTHER PTHR21485:SF4 1 241 2.4E-73 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 Gene3D G3DSA:3.90.550.10 1 241 8.7E-61 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 235 9.6E-50 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NIAKO_RS31280 4a07592da12cbf13a99ada615857c8c9 241 Pfam PF02348 Cytidylyltransferase 4 213 6.5E-43 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NIAKO_RS22675 b6c6edb2e60192780ce2a8cb3d5f85cf 368 PANTHER PTHR37826:SF1 30 365 1.1E-54 T 23-04-2016 NIAKO_RS22675 b6c6edb2e60192780ce2a8cb3d5f85cf 368 PANTHER PTHR37826 30 365 1.1E-54 T 23-04-2016 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 Pfam PF02308 MgtC family 10 131 7.4E-35 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.7E-38 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 PRINTS PR01837 MgtC/SapB protein signature 58 80 1.7E-38 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.7E-38 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 PRINTS PR01837 MgtC/SapB protein signature 85 109 1.7E-38 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NIAKO_RS14880 5171c951c217dc44052271a56265ec24 210 PANTHER PTHR33778 1 138 5.3E-43 T 23-04-2016 NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.9E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.9E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.9E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 Gene3D G3DSA:3.40.50.720 1 247 5.5E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PANTHER PTHR24321 1 249 2.7E-45 T 23-04-2016 NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PANTHER PTHR24321:SF6 1 249 2.7E-45 T 23-04-2016 NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 0.0029 T 23-04-2016 NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 SUPERFAMILY SSF51735 5 247 1.15E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25655 401f89e4daa13f56878551a99905ec63 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 4.3E-59 T 23-04-2016 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 Pfam PF01782 RimM N-terminal domain 28 110 9.1E-14 T 23-04-2016 IPR002676 RimM protein GO:0006364 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 25 187 15.498 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 SUPERFAMILY SSF50447 25 112 1.55E-11 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 27 187 8.5E-25 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 PANTHER PTHR33692 21 190 7.0E-16 T 23-04-2016 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 Gene3D G3DSA:2.40.30.60 24 112 5.6E-13 T 23-04-2016 IPR002676 RimM protein GO:0006364 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 Gene3D G3DSA:2.30.30.240 124 187 8.7E-9 T 23-04-2016 NIAKO_RS34640 d339d848a9fee280dc2f57d8976164a0 192 SUPERFAMILY SSF50346 124 187 8.63E-8 T 23-04-2016 IPR011033 PRC-barrel-like NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 SMART SM00387 578 671 2.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Gene3D G3DSA:3.30.565.10 566 670 3.6E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 PANTHER PTHR24421:SF1 471 668 8.0E-35 T 23-04-2016 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 PANTHER PTHR24421:SF1 170 204 8.0E-35 T 23-04-2016 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Gene3D G3DSA:1.25.40.10 138 199 7.1E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Gene3D G3DSA:1.25.40.10 245 402 7.1E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Gene3D G3DSA:1.25.40.10 71 95 7.1E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 668 1.3E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 SUPERFAMILY SSF55874 561 668 6.68E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 Pfam PF07730 Histidine kinase 476 540 6.2E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 PANTHER PTHR24421 471 668 8.0E-35 T 23-04-2016 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 PANTHER PTHR24421 170 204 8.0E-35 T 23-04-2016 NIAKO_RS15070 b484e7e4b5477598cbcee7368de3f6ad 671 SUPERFAMILY SSF48452 134 323 5.69E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 ProSitePatterns PS01244 Aconitase family signature 2. 413 426 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Gene3D G3DSA:3.40.1060.10 197 315 3.0E-41 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Gene3D G3DSA:3.30.499.10 9 195 8.5E-73 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 320 334 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 150 163 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 240 253 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 130 138 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 354 365 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 164 179 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 413 426 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 107 120 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PRINTS PR00415 Aconitase family signature 226 239 1.7E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 TIGRFAM TIGR01340 aconitase_mito: aconitate hydratase, mitochondrial 12 748 0.0 T 23-04-2016 IPR006248 Aconitase, mitochondrial-like GO:0003994|GO:0006099|GO:0051539 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Pfam PF00330 Aconitase family (aconitate hydratase) 34 476 8.2E-161 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Pfam PF00694 Aconitase C-terminal domain 557 684 2.1E-40 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PANTHER PTHR11670 12 755 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 ProSitePatterns PS00450 Aconitase family signature 1. 350 366 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Gene3D G3DSA:3.30.499.10 316 488 7.1E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 SUPERFAMILY SSF52016 531 752 5.49E-61 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 PANTHER PTHR11670:SF30 12 755 0.0 T 23-04-2016 NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 Gene3D G3DSA:3.20.19.10 535 752 4.8E-81 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS21970 679976e3aa6fa2f734a811737d2d69df 755 SUPERFAMILY SSF53732 6 522 5.62E-165 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SMART SM00387 456 567 1.2E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 564 6.8E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SUPERFAMILY SSF55785 231 285 2.47E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PANTHER PTHR24423 41 63 3.6E-77 T 23-04-2016 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PANTHER PTHR24423 230 566 3.6E-77 T 23-04-2016 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Pfam PF00512 His Kinase A (phospho-acceptor) domain 342 410 1.7E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Gene3D G3DSA:3.30.565.10 396 566 4.4E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Pfam PF00672 HAMP domain 149 216 1.5E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 545 8.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 8.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 564 8.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 8.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SUPERFAMILY SSF55874 400 565 5.11E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SMART SM00091 232 298 3.3E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Gene3D G3DSA:1.10.287.130 337 395 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SUPERFAMILY SSF47384 331 411 1.29E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Gene3D G3DSA:3.30.450.20 230 294 1.2E-7 T 23-04-2016 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SUPERFAMILY SSF158472 171 218 2.35E-10 T 23-04-2016 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SMART SM00304 169 221 3.8E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 Pfam PF13426 PAS domain 245 334 3.0E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS20270 b51b7fc79c5371424d50a37b5b378a76 569 SMART SM00388 342 410 2.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS22000 be557afcb1cf8a23b2cd61df666d690c 315 PANTHER PTHR10366:SF12 5 315 1.9E-98 T 23-04-2016 NIAKO_RS22000 be557afcb1cf8a23b2cd61df666d690c 315 Gene3D G3DSA:3.40.50.720 4 223 6.2E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22000 be557afcb1cf8a23b2cd61df666d690c 315 SUPERFAMILY SSF51735 5 314 1.67E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22000 be557afcb1cf8a23b2cd61df666d690c 315 PANTHER PTHR10366 5 315 1.9E-98 T 23-04-2016 NIAKO_RS22000 be557afcb1cf8a23b2cd61df666d690c 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 7.3E-23 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Pfam PF07715 TonB-dependent Receptor Plug Domain 254 379 1.1E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Pfam PF07660 Secretin and TonB N terminus short domain 93 144 1.1E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Gene3D G3DSA:2.60.40.1120 162 245 3.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 355 385 1.1E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 162 1145 1.5E-220 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532 707 1143 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532 346 572 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532 649 678 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532 162 326 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF56935 974 1019 1.47E-80 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF56935 240 403 1.47E-80 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF56935 455 545 1.47E-80 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF56935 574 916 1.47E-80 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF56935 1063 1143 1.47E-80 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Gene3D G3DSA:2.40.170.20 461 916 2.0E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Gene3D G3DSA:2.170.130.10 246 383 4.6E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SMART SM00965 93 144 5.7E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 SUPERFAMILY SSF49464 161 241 3.01E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 Pfam PF13715 CarboxypepD_reg-like domain 163 244 5.7E-16 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532:SF57 707 1143 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532:SF57 346 572 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532:SF57 649 678 2.7E-194 T 23-04-2016 NIAKO_RS24445 6e0eb8872a97e3edc91e7996be9216f5 1145 PANTHER PTHR11532:SF57 162 326 2.7E-194 T 23-04-2016 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 SUPERFAMILY SSF46689 220 264 6.72E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 Gene3D G3DSA:1.10.10.60 220 264 2.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 SMART SM00342 183 265 1.1E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 Pfam PF12833 Helix-turn-helix domain 193 264 4.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 Gene3D G3DSA:1.10.10.60 174 219 2.8E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 PANTHER PTHR11019 172 263 4.7E-15 T 23-04-2016 NIAKO_RS01395 7f778efe6b016fa4bd68a909a7fdd781 265 PANTHER PTHR11019:SF105 172 263 4.7E-15 T 23-04-2016 NIAKO_RS17865 f99f213803ae6343d0cef3f18179441a 388 SUPERFAMILY SSF53850 5 375 9.78E-42 T 23-04-2016 NIAKO_RS17865 f99f213803ae6343d0cef3f18179441a 388 Gene3D G3DSA:3.40.190.10 22 137 1.6E-13 T 23-04-2016 NIAKO_RS17865 f99f213803ae6343d0cef3f18179441a 388 Pfam PF13416 Bacterial extracellular solute-binding protein 56 303 1.7E-13 T 23-04-2016 NIAKO_RS17865 f99f213803ae6343d0cef3f18179441a 388 Gene3D G3DSA:3.40.190.10 138 312 4.1E-17 T 23-04-2016 NIAKO_RS03220 1b59aa4a63b4b23081e07aca6829db63 650 Pfam PF02705 K+ potassium transporter 14 543 2.3E-165 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 NIAKO_RS03220 1b59aa4a63b4b23081e07aca6829db63 650 PANTHER PTHR30540 16 447 5.4E-117 T 23-04-2016 NIAKO_RS03220 1b59aa4a63b4b23081e07aca6829db63 650 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 639 25.391 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 Pfam PF00005 ABC transporter 20 161 3.5E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 Gene3D G3DSA:3.40.50.300 20 229 1.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 PANTHER PTHR24220 20 218 3.3E-71 T 23-04-2016 NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 PANTHER PTHR24220:SF150 20 218 3.3E-71 T 23-04-2016 NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 SMART SM00382 27 211 1.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS09660 961da11c132f3c3559d07502df9a2627 284 SUPERFAMILY SSF52540 8 227 7.66E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34405 4c0e6a034113736d08e2bdf32e192020 147 SUPERFAMILY SSF82784 10 127 2.62E-29 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS34405 4c0e6a034113736d08e2bdf32e192020 147 Pfam PF02566 OsmC-like protein 36 127 8.5E-17 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS34405 4c0e6a034113736d08e2bdf32e192020 147 Gene3D G3DSA:2.20.25.10 13 39 7.1E-4 T 23-04-2016 NIAKO_RS34405 4c0e6a034113736d08e2bdf32e192020 147 PANTHER PTHR34352 1 142 3.7E-34 T 23-04-2016 NIAKO_RS34405 4c0e6a034113736d08e2bdf32e192020 147 Gene3D G3DSA:3.30.300.20 41 139 2.8E-31 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Gene3D G3DSA:3.30.420.40 203 236 7.8E-26 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Gene3D G3DSA:3.30.420.40 300 355 7.8E-26 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 SUPERFAMILY SSF53067 205 381 3.32E-35 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 SMART SM00842 9 198 1.9E-67 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 451 26.518 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 PIRSF PIRSF003101 1 446 1.1E-123 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Pfam PF02491 SHS2 domain inserted in FTSA 85 164 2.7E-22 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 PANTHER PTHR32432:SF4 1 458 4.1E-108 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Gene3D G3DSA:3.90.640.10 237 299 3.4E-16 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 PANTHER PTHR32432 1 458 4.1E-108 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 382 2.7E-103 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Pfam PF14450 Cell division protein FtsA 209 379 1.7E-22 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 SUPERFAMILY SSF53067 8 198 1.4E-40 T 23-04-2016 NIAKO_RS36040 502e0ec73c9f5498491f15b9fdb63c47 459 Gene3D G3DSA:3.30.420.40 5 141 2.5E-25 T 23-04-2016 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 PANTHER PTHR11986 7 440 1.3E-121 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 Gene3D G3DSA:3.90.1150.10 5 68 4.1E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 Gene3D G3DSA:3.90.1150.10 333 438 4.1E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 279 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 Pfam PF00202 Aminotransferase class-III 29 435 2.2E-51 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 Gene3D G3DSA:3.40.640.10 70 327 1.8E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 PANTHER PTHR11986:SF5 7 440 1.3E-121 T 23-04-2016 NIAKO_RS18570 5adddd05cddaaa11837328c8e759f158 440 SUPERFAMILY SSF53383 5 438 1.89E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS29160 badf9dd2ce55b7cfe39e7dfd7663b2db 129 Pfam PF00072 Response regulator receiver domain 8 119 6.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29160 badf9dd2ce55b7cfe39e7dfd7663b2db 129 Gene3D G3DSA:3.40.50.2300 3 124 5.5E-32 T 23-04-2016 NIAKO_RS29160 badf9dd2ce55b7cfe39e7dfd7663b2db 129 SUPERFAMILY SSF52172 6 125 5.83E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS29160 badf9dd2ce55b7cfe39e7dfd7663b2db 129 SMART SM00448 6 121 3.5E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29160 badf9dd2ce55b7cfe39e7dfd7663b2db 129 PANTHER PTHR26402 6 125 6.6E-33 T 23-04-2016 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 SUPERFAMILY SSF81624 2 97 6.54E-12 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 SUPERFAMILY SSF46946 115 202 2.94E-18 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 PANTHER PTHR22993 1 240 4.2E-32 T 23-04-2016 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 PANTHER PTHR22993:SF11 1 240 4.2E-32 T 23-04-2016 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 SMART SM01232 113 195 2.0E-10 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 Gene3D G3DSA:3.20.190.10 2 93 1.7E-6 T 23-04-2016 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 137 187 2.5E-13 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 Gene3D G3DSA:1.10.8.50 115 241 2.5E-22 T 23-04-2016 NIAKO_RS33020 d90740ecec31c40c83142cab0ce68597 242 SMART SM00898 2 98 1.9E-6 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 Gene3D G3DSA:2.80.10.50 313 431 2.8E-17 T 23-04-2016 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 ProSitePatterns PS01095 Chitinases family 18 active site. 119 127 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 PANTHER PTHR11177 1 310 2.4E-42 T 23-04-2016 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 PANTHER PTHR11177 433 458 2.4E-42 T 23-04-2016 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 453 528 6.0E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 Gene3D G3DSA:3.20.20.80 19 292 5.6E-59 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 SUPERFAMILY SSF51445 14 221 6.53E-61 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 SUPERFAMILY SSF51445 250 285 6.53E-61 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 SUPERFAMILY SSF50405 311 429 4.06E-17 T 23-04-2016 IPR008999 Actin cross-linking NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 SMART SM00636 20 277 5.8E-41 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 NIAKO_RS36340 a95336bb593f085d04bffff3f208694b 528 Pfam PF00704 Glycosyl hydrolases family 18 21 277 1.0E-42 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS34560 d67195d0c04e1a6a05513743b53b4210 278 PANTHER PTHR31480:SF0 13 276 1.5E-29 T 23-04-2016 NIAKO_RS34560 d67195d0c04e1a6a05513743b53b4210 278 Pfam PF00494 Squalene/phytoene synthase 18 209 1.2E-35 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NIAKO_RS34560 d67195d0c04e1a6a05513743b53b4210 278 PANTHER PTHR31480 13 276 1.5E-29 T 23-04-2016 NIAKO_RS34560 d67195d0c04e1a6a05513743b53b4210 278 SUPERFAMILY SSF48576 17 275 2.47E-58 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS34560 d67195d0c04e1a6a05513743b53b4210 278 Gene3D G3DSA:1.10.600.10 9 275 1.3E-46 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 SMART SM01134 74 235 7.2E-65 T 23-04-2016 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 SMART SM00420 7 59 4.3E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.8E-49 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 Pfam PF08220 DeoR-like helix-turn-helix domain 7 61 1.2E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 PANTHER PTHR30363 1 254 5.7E-83 T 23-04-2016 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 SUPERFAMILY SSF100950 76 235 6.98E-31 T 23-04-2016 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 PANTHER PTHR30363:SF1 1 254 5.7E-83 T 23-04-2016 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 Gene3D G3DSA:3.40.50.1360 76 216 5.0E-12 T 23-04-2016 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 3.4E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 3.4E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 Gene3D G3DSA:1.10.10.10 1 59 2.3E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03490 10a74bd1f309ace8ce3935033c937064 254 SUPERFAMILY SSF46785 5 61 2.25E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:3.30.565.10 888 1055 3.9E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF00072 Response regulator receiver domain 1111 1221 4.0E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF55874 891 1055 4.06E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:2.120.10.30 39 111 3.7E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:2.120.10.30 364 486 3.5E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1043 1056 4.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 984 998 4.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1012 4.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1019 1037 4.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 948 1055 5.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 837 902 2.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SMART SM00448 1109 1221 8.9E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:1.10.10.60 1250 1307 9.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:2.120.10.30 260 350 7.0E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:2.120.10.30 498 597 2.3E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:2.120.10.30 178 252 7.9E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF12833 Helix-turn-helix domain 1278 1355 7.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423:SF487 291 369 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423:SF487 30 103 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423:SF487 429 463 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423:SF487 808 1062 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423:SF487 1095 1263 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:3.40.50.2300 1106 1232 2.0E-39 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF47384 825 902 2.35E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:1.10.287.130 828 887 3.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF101898 220 485 1.36E-22 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SMART SM00387 947 1059 1.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SMART SM00388 835 902 1.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF07494 Two component regulator propeller 33 56 9.5E-6 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF07494 Two component regulator propeller 78 100 6.1E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF07494 Two component regulator propeller 400 421 0.017 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Gene3D G3DSA:1.10.10.60 1308 1358 3.6E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF50998 359 661 1.96E-13 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423 291 369 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423 30 103 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423 429 463 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423 808 1062 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 PANTHER PTHR24423 1095 1263 1.2E-131 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SMART SM00342 1271 1354 2.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF63829 35 234 1.11E-12 T 23-04-2016 NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 Pfam PF07495 Y_Y_Y domain 697 760 9.5E-14 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF52172 1108 1237 3.27E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15310 d122ff9a50848edbbf07b3f0390e1431 1372 SUPERFAMILY SSF46689 1307 1358 1.88E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 425 483 4.6E-10 T 23-04-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 SUPERFAMILY SSF51011 423 485 3.02E-5 T 23-04-2016 NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 SUPERFAMILY SSF51445 92 426 1.46E-79 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 Gene3D G3DSA:2.60.40.1180 419 472 3.1E-15 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 Gene3D G3DSA:3.20.20.80 70 418 1.4E-124 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 92 422 1.2E-42 T 23-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain NIAKO_RS30370 52716684eb705113a0e54718f329d9c3 486 PANTHER PTHR11069 43 486 5.7E-115 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PANTHER PTHR23115 1 395 2.0E-244 T 23-04-2016 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 3.0E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.181 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 SUPERFAMILY SSF52540 8 226 3.33E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Gene3D G3DSA:2.40.30.10 301 394 5.6E-45 T 23-04-2016 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 SUPERFAMILY SSF50447 205 302 3.53E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 9.0E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Gene3D G3DSA:2.40.30.10 210 299 2.5E-34 T 23-04-2016 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 SUPERFAMILY SSF50465 303 395 6.62E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.2E-221 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PANTHER PTHR23115:SF112 1 395 2.0E-244 T 23-04-2016 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 3.9E-32 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Gene3D G3DSA:3.40.50.300 4 209 1.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.5E-59 T 23-04-2016 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS24230 1a0acd046895356a3ca075d3ef9856f6 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 Pfam PF04542 Sigma-70 region 2 25 90 1.1E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 Gene3D G3DSA:1.10.1740.10 17 91 2.0E-15 T 23-04-2016 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 SUPERFAMILY SSF88946 18 105 1.49E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 Pfam PF08281 Sigma-70, region 4 123 175 5.0E-18 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 SUPERFAMILY SSF88659 116 178 4.8E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 20 179 2.3E-51 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 PANTHER PTHR30173:SF20 7 193 1.1E-51 T 23-04-2016 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 PANTHER PTHR30173 7 193 1.1E-51 T 23-04-2016 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 179 4.2E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22545 ffb8e97868e6a3ae265b0e905c8bb056 193 Gene3D G3DSA:1.10.10.10 119 181 8.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32190 aa28f825ceafc3bb7381f93fabb39c49 254 Gene3D G3DSA:3.90.550.10 4 110 7.1E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS32190 aa28f825ceafc3bb7381f93fabb39c49 254 Pfam PF00535 Glycosyl transferase family 2 5 102 4.2E-21 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS32190 aa28f825ceafc3bb7381f93fabb39c49 254 PANTHER PTHR10859 4 97 1.1E-22 T 23-04-2016 NIAKO_RS32190 aa28f825ceafc3bb7381f93fabb39c49 254 SUPERFAMILY SSF53448 2 148 9.85E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 PIRSF PIRSF000157 1 920 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 PANTHER PTHR23152:SF4 5 920 0.0 T 23-04-2016 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Pfam PF00676 Dehydrogenase E1 component 198 513 2.7E-52 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Pfam PF02779 Transketolase, pyrimidine binding domain 584 777 1.3E-60 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 SUPERFAMILY SSF52518 107 521 4.65E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Gene3D G3DSA:3.40.50.970 146 516 1.2E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Gene3D G3DSA:3.40.50.970 603 783 2.7E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 5 42 4.7E-9 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 783 918 8.8E-41 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 PANTHER PTHR23152 5 920 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 SMART SM00861 585 778 2.3E-49 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 SUPERFAMILY SSF52518 567 784 2.44E-47 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS24760 5477f97bccb86ba858b82a21f772c0e2 920 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 8 917 2.2E-304 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532:SF57 24 416 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532:SF57 1020 1037 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532:SF57 503 996 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532 24 416 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532 1020 1037 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 PANTHER PTHR11532 503 996 2.6E-221 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.60.40.1120 42 127 5.0E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.170.130.10 128 239 1.9E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 239 7.4E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF56935 305 393 3.92E-82 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF56935 121 264 3.92E-82 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF56935 430 775 3.92E-82 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF56935 929 978 3.92E-82 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF56935 846 889 3.92E-82 T 23-04-2016 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.40.170.20 288 385 4.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.40.170.20 855 978 4.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.40.170.20 240 251 4.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Gene3D G3DSA:2.40.170.20 432 797 4.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 215 244 2.0E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 42 1039 2.1E-235 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 SUPERFAMILY SSF49464 42 122 7.32E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15460 25d2b27e5ce49ebd618fc896b5ccca51 1039 Pfam PF13715 CarboxypepD_reg-like domain 43 124 1.8E-15 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 320 2.2E-101 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 345 60.704 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 142 154 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 165 186 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 277 286 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 87 107 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 108 127 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.7E-47 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 Gene3D G3DSA:3.30.420.40 2 170 7.8E-41 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 SUPERFAMILY SSF53067 3 133 6.04E-24 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 ProSitePatterns PS01016 Glycoprotease family signature. 107 127 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 SUPERFAMILY SSF53067 112 321 1.3E-40 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PANTHER PTHR11735 1 342 6.8E-139 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 327 1.9E-120 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 PANTHER PTHR11735:SF6 1 342 6.8E-139 T 23-04-2016 NIAKO_RS14895 1df761644347221206ea16d0dd645647 345 Pfam PF00814 Glycoprotease family 23 320 9.2E-94 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS06220 b27aeb3c340b0ed8ec5b27b4107b0d27 120 PIRSF PIRSF004761 1 116 7.7E-28 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 NIAKO_RS06220 b27aeb3c340b0ed8ec5b27b4107b0d27 120 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 7.7E-26 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 NIAKO_RS06220 b27aeb3c340b0ed8ec5b27b4107b0d27 120 PANTHER PTHR34535 2 115 4.6E-27 T 23-04-2016 NIAKO_RS35340 9c959c30356f524714cdf6dd062a03d8 328 PANTHER PTHR35810:SF1 1 321 1.7E-160 T 23-04-2016 NIAKO_RS35340 9c959c30356f524714cdf6dd062a03d8 328 Pfam PF13310 Virulence protein RhuM family 62 305 1.3E-114 T 23-04-2016 IPR011204 Virulence protein RhuM-like NIAKO_RS35340 9c959c30356f524714cdf6dd062a03d8 328 PIRSF PIRSF015268 1 328 3.5E-148 T 23-04-2016 IPR011204 Virulence protein RhuM-like NIAKO_RS35340 9c959c30356f524714cdf6dd062a03d8 328 PANTHER PTHR35810 1 321 1.7E-160 T 23-04-2016 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 PANTHER PTHR26402:SF151 7 216 6.0E-55 T 23-04-2016 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 PANTHER PTHR26402 7 216 6.0E-55 T 23-04-2016 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 212 2.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 SUPERFAMILY SSF46894 153 219 1.36E-14 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 SUPERFAMILY SSF52172 6 132 8.25E-34 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 Gene3D G3DSA:1.10.10.10 159 218 4.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 Pfam PF00072 Response regulator receiver domain 9 121 1.9E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 SMART SM00448 7 120 5.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 Gene3D G3DSA:3.40.50.2300 6 158 2.3E-37 T 23-04-2016 NIAKO_RS33120 3285ae211ccf4e07dad8bd40b31e71d8 223 SMART SM00421 155 212 2.1E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 SUPERFAMILY SSF46589 827 891 7.85E-10 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Gene3D G3DSA:3.40.50.620 351 539 2.3E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Gene3D G3DSA:3.40.50.620 30 163 2.3E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 584 7.7E-180 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 SUPERFAMILY SSF52374 346 593 2.03E-119 T 23-04-2016 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 SUPERFAMILY SSF52374 3 193 2.03E-119 T 23-04-2016 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 873 5.8E-271 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PANTHER PTHR11946:SF5 823 887 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PANTHER PTHR11946:SF5 1 805 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Pfam PF08264 Anticodon-binding domain of tRNA 633 774 2.8E-26 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 SUPERFAMILY SSF50677 191 346 1.7E-54 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PANTHER PTHR11946 823 887 0.0 T 23-04-2016 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PANTHER PTHR11946 1 805 0.0 T 23-04-2016 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Gene3D G3DSA:1.10.287.380 826 891 5.1E-5 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Gene3D G3DSA:1.10.730.10 540 764 1.0E-50 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 891 13.87 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Gene3D G3DSA:3.90.740.10 164 342 6.9E-56 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 830 891 3.8E-11 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PRINTS PR00986 Valyl-tRNA synthetase signature 499 517 4.5E-30 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.5E-30 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 4.5E-30 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 4.5E-30 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 4.5E-30 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NIAKO_RS14725 25fa20e341de05d812705b675a55ff11 891 SUPERFAMILY SSF47323 599 808 5.79E-33 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.0E-49 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 Gene3D G3DSA:3.40.50.300 2 214 1.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 SMART SM00490 257 338 2.0E-30 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 SUPERFAMILY SSF52540 73 355 6.53E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 Gene3D G3DSA:3.40.50.300 215 371 6.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 SMART SM00487 20 221 1.6E-58 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 Pfam PF00271 Helicase conserved C-terminal domain 232 337 4.1E-28 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS33030 3566a9625d0ffdfd1c4179ccec5a019b 405 PANTHER PTHR24031 1 375 1.1E-164 T 23-04-2016 NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 1164 1231 1.57E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Pfam PF13585 C-terminal domain of CHU protein family 1615 1681 2.9E-7 T 23-04-2016 NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 500 621 7.2E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 981 1063 4.05E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 1039 1150 9.29E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 1471 1583 7.32E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 1238 1321 1.44E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 1327 1410 1.83E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Pfam PF00801 PKD domain 1514 1571 9.2E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Pfam PF00801 PKD domain 1083 1142 1.5E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 648 729 3.92E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SUPERFAMILY SSF49299 84 204 7.85E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 1238 1311 4.0E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 1161 1234 1.4E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 981 1065 6.3E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 663 728 3.6E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 117 205 8.2E-18 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 534 621 8.1E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 1502 1584 1.6E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 1068 1151 1.9E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 644 726 0.32 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 1154 1234 0.21 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 981 1065 1.8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 1505 1586 1.7E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 1240 1320 3.4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 120 205 9.1E-7 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 SMART SM00089 1327 1409 1.1 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 1327 1406 1.1E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS01025 d8dc79c78f3bf90c0b2327e1799cfb7c 1697 Gene3D G3DSA:2.60.40.670 1070 1148 8.2E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS16145 473734910afbff02e15abfcf3eefb03d 166 SUPERFAMILY SSF82057 85 152 6.87E-17 T 23-04-2016 NIAKO_RS16145 473734910afbff02e15abfcf3eefb03d 166 PANTHER PTHR30305:SF2 11 151 1.6E-23 T 23-04-2016 NIAKO_RS16145 473734910afbff02e15abfcf3eefb03d 166 PANTHER PTHR30305 11 151 1.6E-23 T 23-04-2016 NIAKO_RS16145 473734910afbff02e15abfcf3eefb03d 166 Pfam PF03831 PhnA domain 88 152 2.1E-22 T 23-04-2016 IPR013988 PhnA protein, C-terminal NIAKO_RS16145 473734910afbff02e15abfcf3eefb03d 166 Gene3D G3DSA:2.30.30.40 87 152 6.1E-18 T 23-04-2016 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 SUPERFAMILY SSF48317 301 508 1.44E-36 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 PANTHER PTHR34599:SF1 49 176 3.6E-24 T 23-04-2016 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 PANTHER PTHR34599:SF1 198 506 3.6E-24 T 23-04-2016 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 SUPERFAMILY SSF48317 46 266 9.68E-20 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 Pfam PF01569 PAP2 superfamily 402 497 3.7E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 Gene3D G3DSA:1.10.606.10 45 273 6.7E-35 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 Gene3D G3DSA:1.10.606.10 300 517 3.9E-52 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 PANTHER PTHR34599 49 176 3.6E-24 T 23-04-2016 NIAKO_RS32935 bd0bea8476b32a52c45d8ba6445238c2 518 PANTHER PTHR34599 198 506 3.6E-24 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423 522 604 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF00072 Response regulator receiver domain 1207 1317 1.1E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF63829 257 279 2.03E-9 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF63829 330 464 2.03E-9 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF63829 39 184 2.03E-9 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:3.30.565.10 988 1158 2.8E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:2.120.10.30 42 173 2.1E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:2.120.10.30 479 724 8.1E-15 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF63829 483 737 2.18E-17 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF55874 990 1157 6.55E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423:SF487 885 1362 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SMART SM00342 1370 1453 2.0E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 938 1000 2.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF12833 Helix-turn-helix domain 1377 1454 1.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423:SF487 42 129 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423:SF487 522 604 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:1.10.287.130 929 987 2.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SMART SM00387 1047 1161 4.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:1.10.10.60 1350 1406 2.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF46689 1406 1455 4.66E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07495 Y_Y_Y domain 828 887 8.1E-12 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF47384 922 1001 4.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07494 Two component regulator propeller 441 461 0.0051 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07494 Two component regulator propeller 686 709 0.001 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07494 Two component regulator propeller 536 558 4.7E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07494 Two component regulator propeller 489 506 0.0015 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF07494 Two component regulator propeller 59 82 0.0022 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SUPERFAMILY SSF52172 1206 1329 6.4E-35 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1086 1100 7.6E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1121 1139 7.6E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:2.120.10.30 381 464 2.0E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SMART SM00448 1205 1317 3.5E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423 42 129 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 PANTHER PTHR24423 885 1362 5.2E-140 T 23-04-2016 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1048 1158 1.7E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:1.10.10.60 1407 1454 1.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 SMART SM00388 935 1001 4.3E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS06595 147aff31314849aa11ee6ae58baa10d6 1456 Gene3D G3DSA:3.40.50.2300 1202 1327 2.0E-37 T 23-04-2016 NIAKO_RS02095 b76eca4fa1d2b628fa5e9ff23f016d57 359 Pfam PF12725 Protein of unknown function (DUF3810) 32 348 4.2E-96 T 23-04-2016 IPR024294 Protein of unknown function DUF3810 NIAKO_RS02095 b76eca4fa1d2b628fa5e9ff23f016d57 359 SUPERFAMILY SSF55486 179 281 2.18E-5 T 23-04-2016 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 PANTHER PTHR34220 441 668 4.6E-39 T 23-04-2016 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 Gene3D G3DSA:3.30.565.10 544 702 4.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 Pfam PF06580 Histidine kinase 494 573 1.0E-20 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SUPERFAMILY SSF55874 550 670 8.43E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SUPERFAMILY SSF48452 139 245 1.21E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SUPERFAMILY SSF48452 288 394 1.21E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 Gene3D G3DSA:1.25.40.10 98 235 1.9E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 Gene3D G3DSA:1.25.40.10 255 431 3.5E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SMART SM00028 285 318 42.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SMART SM00028 203 236 0.24 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36595 d546c857f6c779cfc94bc7430a2ecf00 704 SMART SM00028 325 358 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 Pfam PF00005 ABC transporter 2 153 1.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 SMART SM00382 3 211 3.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 PANTHER PTHR24220 1 85 1.1E-63 T 23-04-2016 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 PANTHER PTHR24220 101 223 1.1E-63 T 23-04-2016 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 PANTHER PTHR24220:SF358 1 85 1.1E-63 T 23-04-2016 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 PANTHER PTHR24220:SF358 101 223 1.1E-63 T 23-04-2016 NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 Gene3D G3DSA:3.40.50.300 2 218 1.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06415 23da11ace28ba344ff616a388a21a065 224 SUPERFAMILY SSF52540 2 222 9.97E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 918 1056 1.7E-18 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 PANTHER PTHR40094:SF1 240 1789 1.1E-83 T 23-04-2016 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 SUPERFAMILY SSF48239 1319 1582 2.69E-33 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Gene3D G3DSA:1.50.10.20 1320 1584 7.6E-28 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Pfam PF01835 MG2 domain 560 653 5.1E-19 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 455 553 2.7E-21 T 23-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 SMART SM01360 1120 1208 7.4E-26 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 PANTHER PTHR40094 240 1789 1.1E-83 T 23-04-2016 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1321 1345 7.1E-7 T 23-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 Pfam PF00207 Alpha-2-macroglobulin family 1121 1205 2.6E-11 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS24860 d0dd533ce513811eb75a9afc216c9ae5 1789 SMART SM01359 918 1056 2.1E-34 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PANTHER PTHR22773:SF40 1 488 3.2E-172 T 23-04-2016 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 Pfam PF00361 Proton-conducting membrane transporter 130 425 6.8E-73 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 489 3.2E-166 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 243 267 1.2E-36 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 1.2E-36 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 1.2E-36 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 1.2E-36 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 331 350 1.2E-36 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14540 4421a1dd5dd3845918608b2d0d158c84 491 PANTHER PTHR22773 1 488 3.2E-172 T 23-04-2016 NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 Gene3D G3DSA:3.30.750.24 407 496 2.2E-10 T 23-04-2016 IPR002645 STAS domain NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 SUPERFAMILY SSF52091 407 491 3.53E-12 T 23-04-2016 IPR002645 STAS domain NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 Pfam PF00916 Sulfate permease family 17 364 2.1E-50 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 PANTHER PTHR11814 14 491 2.8E-147 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 Pfam PF01740 STAS domain 409 492 6.9E-7 T 23-04-2016 IPR002645 STAS domain NIAKO_RS35270 1c3814fcb88ecabe2c073d612042c2af 509 PANTHER PTHR11814:SF76 14 491 2.8E-147 T 23-04-2016 NIAKO_RS04735 273876a22ccd90a2ea3fdba8eb0a9330 191 Gene3D G3DSA:3.40.33.10 27 183 9.1E-11 T 23-04-2016 IPR014044 CAP domain NIAKO_RS04735 273876a22ccd90a2ea3fdba8eb0a9330 191 SUPERFAMILY SSF55797 27 178 4.06E-12 T 23-04-2016 IPR014044 CAP domain NIAKO_RS04735 273876a22ccd90a2ea3fdba8eb0a9330 191 Pfam PF00188 Cysteine-rich secretory protein family 37 183 1.4E-6 T 23-04-2016 IPR014044 CAP domain NIAKO_RS34430 42067327a64084e2b9465f0fd65b2ca5 1147 Pfam PF01364 Peptidase family C25 413 786 8.1E-90 T 23-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 NIAKO_RS34430 42067327a64084e2b9465f0fd65b2ca5 1147 Gene3D G3DSA:3.40.50.10390 405 553 8.9E-19 T 23-04-2016 IPR029031 Gingipain, N-terminal NIAKO_RS34430 42067327a64084e2b9465f0fd65b2ca5 1147 SUPERFAMILY SSF52129 403 789 1.26E-77 T 23-04-2016 IPR029030 Caspase-like domain NIAKO_RS34430 42067327a64084e2b9465f0fd65b2ca5 1147 Gene3D G3DSA:3.40.50.1460 556 787 3.5E-61 T 23-04-2016 IPR029030 Caspase-like domain NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 PANTHER PTHR20863 3 76 8.1E-27 T 23-04-2016 NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-10 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 3.5E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 9.4E-33 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 Gene3D G3DSA:1.10.1200.10 3 76 4.2E-33 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 SUPERFAMILY SSF47336 2 76 1.02E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS27785 ead9eeb301374fed920230e8b5a7cf29 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.467 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 Gene3D G3DSA:3.90.226.10 206 421 6.6E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 SUPERFAMILY SSF50156 99 170 4.48E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 SUPERFAMILY SSF52096 199 277 3.15E-27 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 SUPERFAMILY SSF52096 309 405 3.15E-27 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 SUPERFAMILY SSF52096 42 117 3.15E-27 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 Gene3D G3DSA:2.30.42.10 117 169 1.8E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS24380 aad9568413acff26442bd669fd63da4e 463 Pfam PF03572 Peptidase family S41 207 394 7.7E-21 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS05490 be378ecbe023dcaa1d8dcedc03d53dc6 966 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 881 964 6.3E-17 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS05490 be378ecbe023dcaa1d8dcedc03d53dc6 966 Pfam PF13585 C-terminal domain of CHU protein family 881 963 1.8E-19 T 23-04-2016 NIAKO_RS35860 d09252d16491754e2a61f680ea97a46b 295 SUPERFAMILY SSF109604 46 295 2.2E-108 T 23-04-2016 NIAKO_RS35860 d09252d16491754e2a61f680ea97a46b 295 PANTHER PTHR12588 38 295 1.6E-153 T 23-04-2016 IPR007828 Inositol oxygenase GO:0005506|GO:0005737|GO:0019310|GO:0050113|GO:0055114 KEGG: 00053+1.13.99.1|KEGG: 00562+1.13.99.1|MetaCyc: PWY-4841|UniPathway: UPA00111 NIAKO_RS35860 d09252d16491754e2a61f680ea97a46b 295 PANTHER PTHR12588:SF0 38 295 1.6E-153 T 23-04-2016 NIAKO_RS35860 d09252d16491754e2a61f680ea97a46b 295 Pfam PF05153 Myo-inositol oxygenase 53 295 3.7E-115 T 23-04-2016 IPR007828 Inositol oxygenase GO:0005506|GO:0005737|GO:0019310|GO:0050113|GO:0055114 KEGG: 00053+1.13.99.1|KEGG: 00562+1.13.99.1|MetaCyc: PWY-4841|UniPathway: UPA00111 NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 PIRSF PIRSF035652 6 118 1.7E-29 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 PANTHER PTHR38471 3 116 3.8E-23 T 23-04-2016 NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 12 115 3.0E-24 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 Pfam PF05635 23S rRNA-intervening sequence protein 8 109 4.1E-20 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 Gene3D G3DSA:1.20.1440.60 7 116 3.4E-28 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 PANTHER PTHR38471:SF1 3 116 3.8E-23 T 23-04-2016 NIAKO_RS26885 36d86310a2dfbcc4b3ead57aa3e13d10 118 SUPERFAMILY SSF158446 7 112 1.14E-24 T 23-04-2016 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 Gene3D G3DSA:1.10.1740.10 7 85 1.1E-17 T 23-04-2016 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 SUPERFAMILY SSF88946 7 86 3.14E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 Gene3D G3DSA:1.10.10.10 112 172 5.8E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 170 2.6E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 PANTHER PTHR30173:SF20 8 173 2.0E-29 T 23-04-2016 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 SUPERFAMILY SSF88659 103 171 5.05E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 Pfam PF04542 Sigma-70 region 2 15 81 3.5E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS10450 4d0633817e5c9d39b5809f65ab488568 178 PANTHER PTHR30173 8 173 2.0E-29 T 23-04-2016 NIAKO_RS15295 000ec21b5cc11cc5e87a2411400e639d 662 SUPERFAMILY SSF49265 376 451 6.64E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS15295 000ec21b5cc11cc5e87a2411400e639d 662 SUPERFAMILY SSF48230 20 337 5.68E-49 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS15295 000ec21b5cc11cc5e87a2411400e639d 662 Gene3D G3DSA:1.50.10.110 76 347 1.4E-48 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS15295 000ec21b5cc11cc5e87a2411400e639d 662 Gene3D G3DSA:2.60.40.10 377 458 4.1E-18 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15295 000ec21b5cc11cc5e87a2411400e639d 662 Pfam PF05426 Alginate lyase 81 284 1.7E-18 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 Pfam PF07494 Two component regulator propeller 42 63 0.003 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 912 1013 7.8E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 PANTHER PTHR24423:SF477 767 1013 7.3E-22 T 23-04-2016 NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 SUPERFAMILY SSF55874 870 1013 1.07E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 Gene3D G3DSA:1.10.287.130 791 847 7.3E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 PANTHER PTHR24423 767 1013 7.3E-22 T 23-04-2016 NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 Gene3D G3DSA:3.30.565.10 874 1012 1.3E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 Gene3D G3DSA:2.130.10.140 464 530 4.9E-5 T 23-04-2016 NIAKO_RS15925 60aff2ce2dff3ba8c0e2254ade02f0f2 1016 SUPERFAMILY SSF47384 782 864 5.1E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 478 80.434 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 Gene3D G3DSA:3.90.1300.10 3 478 1.1E-164 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 SUPERFAMILY SSF75304 4 477 4.32E-143 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 PANTHER PTHR11895 2 478 2.8E-184 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 PANTHER PTHR11895:SF7 2 478 2.8E-184 T 23-04-2016 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 Pfam PF01425 Amidase 23 466 5.7E-140 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS27560 3373e99a4a6c5704bdae26bb425bd5e4 481 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 1.8E-167 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NIAKO_RS31390 a88e6e73ec23d7dea7a451fea93d0b1d 386 Gene3D G3DSA:3.40.50.410 38 190 2.4E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS31390 a88e6e73ec23d7dea7a451fea93d0b1d 386 Gene3D G3DSA:3.40.50.410 316 326 2.4E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS31390 a88e6e73ec23d7dea7a451fea93d0b1d 386 SUPERFAMILY SSF53300 39 214 1.88E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 PANTHER PTHR35148 4 307 1.0E-27 T 23-04-2016 NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 PANTHER PTHR35148 340 500 1.0E-27 T 23-04-2016 NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 SUPERFAMILY SSF48452 348 558 1.16E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 SUPERFAMILY SSF48452 23 312 1.16E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 Pfam PF12771 Starch-binding associating with outer membrane 13 261 6.9E-15 T 23-04-2016 NIAKO_RS35285 793e9f7e39e535a42105abe8889d1d28 559 Pfam PF12771 Starch-binding associating with outer membrane 379 510 1.2E-9 T 23-04-2016 NIAKO_RS24940 ecd20851923e42af1fdce2e5904efb7e 280 Pfam PF02621 Menaquinone biosynthesis 3 262 1.7E-86 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 NIAKO_RS24940 ecd20851923e42af1fdce2e5904efb7e 280 PANTHER PTHR37167 1 280 1.4E-99 T 23-04-2016 NIAKO_RS24940 ecd20851923e42af1fdce2e5904efb7e 280 SUPERFAMILY SSF53850 3 261 3.35E-77 T 23-04-2016 NIAKO_RS24940 ecd20851923e42af1fdce2e5904efb7e 280 Gene3D G3DSA:3.40.190.10 79 177 7.0E-13 T 23-04-2016 NIAKO_RS24940 ecd20851923e42af1fdce2e5904efb7e 280 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 2 268 39.308 T 23-04-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 UniPathway: UPA00079 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 34 61 0.0012 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 SUPERFAMILY SSF55816 385 585 1.05E-30 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 Pfam PF00149 Calcineurin-like phosphoesterase 92 314 2.4E-8 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 Pfam PF02872 5'-nucleotidase, C-terminal domain 388 533 1.3E-19 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 SUPERFAMILY SSF56300 91 386 2.95E-61 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 ProSitePatterns PS00785 5'-nucleotidase signature 1. 91 103 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 Gene3D G3DSA:3.60.21.10 90 386 2.1E-63 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PRINTS PR01607 Apyrase family signature 276 293 2.8E-7 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PRINTS PR01607 Apyrase family signature 297 320 2.8E-7 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PRINTS PR01607 Apyrase family signature 89 107 2.8E-7 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PRINTS PR01607 Apyrase family signature 444 467 2.8E-7 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PRINTS PR01607 Apyrase family signature 325 345 2.8E-7 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 Gene3D G3DSA:3.90.780.10 388 585 3.4E-23 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NIAKO_RS22620 42f82ef1ccd9977e16d3816669737635 604 PANTHER PTHR11575 83 582 2.5E-71 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 SMART SM00448 1 112 3.9E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 1.4E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 PANTHER PTHR26402 1 222 2.3E-69 T 23-04-2016 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 Gene3D G3DSA:1.10.10.10 124 223 6.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 SUPERFAMILY SSF52172 1 171 8.3E-35 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 SMART SM00862 145 222 6.5E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 Gene3D G3DSA:3.40.50.2300 1 123 9.0E-33 T 23-04-2016 NIAKO_RS23775 21d8b7ca558682fa37e1ee46e14474f6 224 PANTHER PTHR26402:SF578 1 222 2.3E-69 T 23-04-2016 NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 PANTHER PTHR35446:SF1 1 170 2.1E-25 T 23-04-2016 NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 SUPERFAMILY SSF69118 1 174 1.56E-39 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 56 104 2.6E-12 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 Gene3D G3DSA:1.20.1290.10 1 108 4.3E-28 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 Gene3D G3DSA:1.20.1290.10 135 173 1.6E-4 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 PANTHER PTHR35446 1 170 2.1E-25 T 23-04-2016 NIAKO_RS01260 53466ad7787ec4390496ac491363c93a 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 53 116 1.7E-14 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 Gene3D G3DSA:2.170.130.10 134 207 3.7E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 PANTHER PTHR30069:SF12 20 251 2.0E-22 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 PANTHER PTHR30069:SF12 332 961 2.0E-22 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 SUPERFAMILY SSF49464 23 117 1.18E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 SUPERFAMILY SSF56935 816 957 1.65E-20 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 SUPERFAMILY SSF56935 133 252 1.65E-20 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 SUPERFAMILY SSF56935 586 731 1.65E-20 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 SUPERFAMILY SSF56935 340 520 1.65E-20 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 PANTHER PTHR30069 20 251 2.0E-22 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 PANTHER PTHR30069 332 961 2.0E-22 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 Pfam PF14905 Outer membrane protein beta-barrel family 478 956 7.4E-38 T 23-04-2016 NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 Gene3D G3DSA:2.60.40.1120 25 121 1.6E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS31670 e93f186a3678ee34b72cd1e0a71d82ba 1005 Pfam PF13620 Carboxypeptidase regulatory-like domain 24 98 6.1E-11 T 23-04-2016 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 PANTHER PTHR10357 1 404 2.0E-61 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 SMART SM00642 1 333 5.9E-25 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 Pfam PF16657 Maltogenic Amylase, C-terminal domain 353 420 3.6E-8 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 Pfam PF00128 Alpha amylase, catalytic domain 29 119 1.1E-21 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 Pfam PF00128 Alpha amylase, catalytic domain 124 300 1.9E-15 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 Gene3D G3DSA:2.60.40.1180 350 423 3.3E-11 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 SUPERFAMILY SSF51011 352 424 2.95E-10 T 23-04-2016 NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 SUPERFAMILY SSF51445 7 342 1.59E-83 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS01550 da4ea3d9c77e42887b607b829a0258f4 425 Gene3D G3DSA:3.20.20.80 10 340 1.2E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 Gene3D G3DSA:1.10.10.10 155 206 3.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 PANTHER PTHR26402:SF458 4 203 3.5E-57 T 23-04-2016 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 Gene3D G3DSA:3.40.50.2300 1 154 1.5E-34 T 23-04-2016 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 3.4E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 Pfam PF00072 Response regulator receiver domain 6 117 1.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 SUPERFAMILY SSF52172 3 131 2.56E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 SMART SM00421 149 206 2.8E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 SUPERFAMILY SSF46894 146 207 4.42E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 SMART SM00448 4 117 1.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 PANTHER PTHR26402 4 203 3.5E-57 T 23-04-2016 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS30005 0b1f5cc97dca14d38a8b3de8338d9bfc 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 PANTHER PTHR21666 15 112 6.3E-24 T 23-04-2016 NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 PANTHER PTHR21666 130 180 6.3E-24 T 23-04-2016 NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 Gene3D G3DSA:2.70.70.10 11 167 2.1E-31 T 23-04-2016 NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 SUPERFAMILY SSF51261 14 166 1.46E-27 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 Pfam PF01551 Peptidase family M23 130 161 5.4E-6 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS28440 4c8eb15da6ecb6567de450e90ce8e4b0 558 Pfam PF01551 Peptidase family M23 43 110 6.5E-10 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 PANTHER PTHR30476 1 163 1.4E-70 T 23-04-2016 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 24.943 T 23-04-2016 IPR007551 Protein of unknown function DUF520 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 SUPERFAMILY SSF89963 92 162 7.32E-26 T 23-04-2016 IPR007551 Protein of unknown function DUF520 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 5.3E-61 T 23-04-2016 IPR007551 Protein of unknown function DUF520 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 Gene3D G3DSA:3.30.70.990 9 96 4.5E-26 T 23-04-2016 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 PANTHER PTHR30476:SF0 1 163 1.4E-70 T 23-04-2016 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 SUPERFAMILY SSF89963 2 89 1.2E-26 T 23-04-2016 IPR007551 Protein of unknown function DUF520 NIAKO_RS10705 d4ac85322d4d72034f1d9d1c43e4bebf 163 Gene3D G3DSA:3.30.70.860 97 162 5.1E-31 T 23-04-2016 NIAKO_RS15670 5b4e02fdbdc94426377b92beddbf7334 499 Gene3D G3DSA:1.10.150.20 182 227 1.2E-4 T 23-04-2016 NIAKO_RS15670 5b4e02fdbdc94426377b92beddbf7334 499 PANTHER PTHR35369:SF2 40 499 1.2E-79 T 23-04-2016 NIAKO_RS15670 5b4e02fdbdc94426377b92beddbf7334 499 PANTHER PTHR35369 40 499 1.2E-79 T 23-04-2016 NIAKO_RS15670 5b4e02fdbdc94426377b92beddbf7334 499 Pfam PF00817 impB/mucB/samB family 19 145 3.3E-8 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS15670 5b4e02fdbdc94426377b92beddbf7334 499 SUPERFAMILY SSF56672 4 228 5.67E-37 T 23-04-2016 NIAKO_RS13115 ac60f5eda0a64764a8a3658b5a771af1 246 SUPERFAMILY SSF49482 39 219 1.31E-39 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NIAKO_RS13115 ac60f5eda0a64764a8a3658b5a771af1 246 Gene3D G3DSA:2.60.130.10 40 192 2.5E-40 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NIAKO_RS13115 ac60f5eda0a64764a8a3658b5a771af1 246 PANTHER PTHR34315 32 168 1.6E-33 T 23-04-2016 NIAKO_RS13115 ac60f5eda0a64764a8a3658b5a771af1 246 Pfam PF00775 Dioxygenase 65 180 9.5E-10 T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NIAKO_RS13115 ac60f5eda0a64764a8a3658b5a771af1 246 PANTHER PTHR34315:SF1 32 168 1.6E-33 T 23-04-2016 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 25 183 4.4E-43 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 PANTHER PTHR30173:SF20 1 199 7.6E-44 T 23-04-2016 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 Gene3D G3DSA:1.10.1740.10 9 105 1.0E-17 T 23-04-2016 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 Pfam PF08281 Sigma-70, region 4 128 178 1.3E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 Pfam PF04542 Sigma-70 region 2 30 93 2.3E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 183 2.0E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 Gene3D G3DSA:1.10.10.10 121 184 2.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 SUPERFAMILY SSF88946 10 103 1.26E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 SUPERFAMILY SSF88659 115 184 1.57E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20150 c10d6a975237b4da353c044382627de4 199 PANTHER PTHR30173 1 199 7.6E-44 T 23-04-2016 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PANTHER PTHR21661:SF35 41 431 8.1E-124 T 23-04-2016 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PANTHER PTHR21661 41 431 8.1E-124 T 23-04-2016 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PRINTS PR00412 Epoxide hydrolase signature 213 226 2.5E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PRINTS PR00412 Epoxide hydrolase signature 139 157 2.5E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PRINTS PR00412 Epoxide hydrolase signature 403 425 2.5E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PRINTS PR00412 Epoxide hydrolase signature 227 240 2.5E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PRINTS PR00412 Epoxide hydrolase signature 168 183 2.5E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 Pfam PF06441 Epoxide hydrolase N terminus 44 147 2.8E-35 T 23-04-2016 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 SUPERFAMILY SSF53474 38 428 1.83E-90 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 PIRSF PIRSF001112 8 431 4.8E-154 T 23-04-2016 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9 NIAKO_RS20495 8140311627d4511815dde0edae5f3e2e 431 Gene3D G3DSA:3.40.50.1820 35 430 1.1E-125 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 1.3E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 SUPERFAMILY SSF53822 117 337 1.18E-10 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 PANTHER PTHR38445:SF1 6 290 5.4E-14 T 23-04-2016 NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 SUPERFAMILY SSF46785 14 102 2.72E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 Gene3D G3DSA:3.40.50.2300 257 337 1.2E-4 T 23-04-2016 NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 SMART SM00345 23 82 7.0E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 PANTHER PTHR38445 6 290 5.4E-14 T 23-04-2016 NIAKO_RS07200 7c01cf89d6d2aeffc0afbb10a22f05b4 338 Gene3D G3DSA:1.10.10.10 15 83 2.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 143 2.5E-45 T 23-04-2016 NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 505 4.3E-192 T 23-04-2016 IPR004482 Mg chelatase-related protein NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 Gene3D G3DSA:3.40.50.300 193 394 2.8E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 PANTHER PTHR32039 1 509 4.2E-246 T 23-04-2016 NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 323 336 3.4E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 214 229 3.4E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 295 309 3.4E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 SMART SM00382 215 398 1.6E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 409 505 6.4E-32 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 SUPERFAMILY SSF52540 194 506 7.07E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 Gene3D G3DSA:3.30.230.10 6 168 3.5E-38 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 SUPERFAMILY SSF54211 6 170 6.07E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 Pfam PF01078 Magnesium chelatase, subunit ChlI 195 399 2.7E-95 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain NIAKO_RS27320 ad77a13d8c111e580a17a677ba68bfc1 514 PANTHER PTHR32039:SF7 1 509 4.2E-246 T 23-04-2016 IPR004482 Mg chelatase-related protein NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 SUPERFAMILY SSF53448 5 282 4.15E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 Pfam PF00483 Nucleotidyl transferase 8 286 2.0E-40 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 Gene3D G3DSA:3.90.550.10 4 273 3.8E-75 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 SUPERFAMILY SSF159283 290 352 3.27E-15 T 23-04-2016 NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 PANTHER PTHR12526 156 291 1.4E-36 T 23-04-2016 NIAKO_RS31535 e4737ba4478d21b9a06723f6ddf1dcc7 360 PANTHER PTHR12526:SF387 156 291 1.4E-36 T 23-04-2016 NIAKO_RS35075 7d026aabe952d6aa2b2daf8655ddd0ef 101 SMART SM00746 54 91 0.0025 T 23-04-2016 IPR011017 TRASH domain NIAKO_RS35075 7d026aabe952d6aa2b2daf8655ddd0ef 101 Pfam PF04945 YHS domain 56 96 1.3E-8 T 23-04-2016 IPR007029 YHS domain NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 SMART SM00729 175 418 1.3E-48 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 PANTHER PTHR11918 257 492 2.2E-206 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 PANTHER PTHR11918 31 235 2.2E-206 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 Pfam PF01938 TRAM domain 432 491 4.0E-10 T 23-04-2016 IPR002792 TRAM domain NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 SUPERFAMILY SSF102114 168 234 4.02E-53 T 23-04-2016 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 SUPERFAMILY SSF102114 267 423 4.02E-53 T 23-04-2016 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 Gene3D G3DSA:3.80.30.20 174 428 3.1E-74 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 32 490 1.5E-131 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 Pfam PF04055 Radical SAM superfamily 179 373 7.5E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 PANTHER PTHR11918:SF43 257 492 2.2E-206 T 23-04-2016 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 PANTHER PTHR11918:SF43 31 235 2.2E-206 T 23-04-2016 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 Pfam PF00919 Uncharacterized protein family UPF0004 32 131 2.6E-31 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 32 492 1.0E-132 T 23-04-2016 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 179 199 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 NIAKO_RS05870 088202d62e76589c621bf5a9fec14cb1 494 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 31 494 67.49 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 PANTHER PTHR30627:SF2 6 638 2.1E-144 T 23-04-2016 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 Gene3D G3DSA:3.40.710.10 238 603 8.0E-95 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 SUPERFAMILY SSF56519 49 235 1.07E-33 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 8 602 3.3E-140 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 PANTHER PTHR30627 6 638 2.1E-144 T 23-04-2016 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 Gene3D G3DSA:3.90.1310.10 124 235 6.8E-21 T 23-04-2016 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 SUPERFAMILY SSF56601 238 602 7.32E-86 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 Pfam PF03717 Penicillin-binding Protein dimerisation domain 52 217 1.6E-26 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS19735 a533c68560f82d2ac16bb2afa0b8ddc7 670 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 594 3.7E-62 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS12675 dc5eb3a7fb21e15a170f980dc3a3b1f7 531 PIRSF PIRSF012535 2 530 5.4E-87 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC NIAKO_RS12675 dc5eb3a7fb21e15a170f980dc3a3b1f7 531 PANTHER PTHR41301 4 530 6.0E-49 T 23-04-2016 NIAKO_RS12675 dc5eb3a7fb21e15a170f980dc3a3b1f7 531 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 6 530 23.51 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC NIAKO_RS12675 dc5eb3a7fb21e15a170f980dc3a3b1f7 531 Pfam PF10079 Uncharacterized protein conserved in bacteria (DUF2317) 6 527 1.3E-174 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC NIAKO_RS12675 dc5eb3a7fb21e15a170f980dc3a3b1f7 531 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 15 527 2.4E-125 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 Gene3D G3DSA:1.20.58.110 1 83 4.2E-22 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 14.924 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 SUPERFAMILY SSF46992 3 83 3.01E-20 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 Pfam PF01649 Ribosomal protein S20 2 81 6.5E-23 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 83 3.8E-17 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 2.0E-9 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24755 b8ff218bac57efcee50dd89c0dfdbd76 85 PANTHER PTHR33398 1 84 3.3E-20 T 23-04-2016 NIAKO_RS34500 1a7d8d8b84b36a0e68f2d99dd6286b3e 216 Pfam PF14681 Uracil phosphoribosyltransferase 12 212 3.5E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS34500 1a7d8d8b84b36a0e68f2d99dd6286b3e 216 SUPERFAMILY SSF53271 10 211 1.12E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS34500 1a7d8d8b84b36a0e68f2d99dd6286b3e 216 Gene3D G3DSA:3.40.50.2020 11 211 5.2E-53 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS34500 1a7d8d8b84b36a0e68f2d99dd6286b3e 216 PANTHER PTHR10285:SF46 11 202 6.7E-51 T 23-04-2016 NIAKO_RS34500 1a7d8d8b84b36a0e68f2d99dd6286b3e 216 PANTHER PTHR10285 11 202 6.7E-51 T 23-04-2016 NIAKO_RS37100 ea3928992d4430c0637ab4f17d9807e6 992 SUPERFAMILY SSF55486 354 572 4.54E-27 T 23-04-2016 NIAKO_RS37100 ea3928992d4430c0637ab4f17d9807e6 992 PANTHER PTHR11533:SF185 341 572 2.4E-13 T 23-04-2016 NIAKO_RS37100 ea3928992d4430c0637ab4f17d9807e6 992 PANTHER PTHR11533 341 572 2.4E-13 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS37100 ea3928992d4430c0637ab4f17d9807e6 992 Gene3D G3DSA:1.10.390.10 440 571 1.2E-11 T 23-04-2016 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 PANTHER PTHR26402:SF50 18 250 2.3E-95 T 23-04-2016 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 SMART SM00862 170 246 1.1E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 Gene3D G3DSA:3.40.50.2300 13 137 3.1E-40 T 23-04-2016 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 Gene3D G3DSA:1.10.10.10 148 249 2.4E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 SUPERFAMILY SSF52172 11 140 1.71E-40 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 171 246 1.1E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 SMART SM00448 18 129 7.7E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 PANTHER PTHR26402 18 250 2.3E-95 T 23-04-2016 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 SUPERFAMILY SSF46894 147 247 8.69E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS09145 d2134f2d3d3544928a2f51c6a1134989 250 Pfam PF00072 Response regulator receiver domain 20 129 4.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 Pfam PF16344 Domain of unknown function (DUF4974) 279 357 1.1E-14 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 Pfam PF04773 FecR protein 124 222 1.8E-13 T 23-04-2016 IPR006860 FecR protein NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 PANTHER PTHR30273 285 363 2.3E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 PANTHER PTHR30273 1 262 2.3E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 PANTHER PTHR30273:SF2 285 363 2.3E-58 T 23-04-2016 NIAKO_RS26055 ccf73e36806683c1faa357d421c4aa2e 363 PANTHER PTHR30273:SF2 1 262 2.3E-58 T 23-04-2016 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 PIRSF PIRSF000388 2 273 1.3E-111 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 273 3.3E-102 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 268 4.2E-115 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 Gene3D G3DSA:3.20.20.60 10 273 3.2E-117 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 273 43.312 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 SUPERFAMILY SSF51621 11 273 3.86E-105 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS12735 0acbedf6a0f42f2621c362a212d45e77 273 PANTHER PTHR20881 9 273 1.9E-147 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS09260 778fc61f9964d4283d3697392339ff64 256 PANTHER PTHR30188 33 256 1.1E-89 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS09260 778fc61f9964d4283d3697392339ff64 256 Pfam PF02405 Permease MlaE 38 248 8.3E-71 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS09260 778fc61f9964d4283d3697392339ff64 256 PANTHER PTHR30188:SF6 33 256 1.1E-89 T 23-04-2016 NIAKO_RS28335 79f23aa07c7413b1497b746b01fcff35 206 Pfam PF03797 Autotransporter beta-domain 10 128 1.9E-6 T 23-04-2016 IPR005546 Autotransporter beta-domain NIAKO_RS28335 79f23aa07c7413b1497b746b01fcff35 206 Gene3D G3DSA:2.40.160.20 12 186 3.3E-8 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS28335 79f23aa07c7413b1497b746b01fcff35 206 SUPERFAMILY SSF56925 12 161 2.2E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 SMART SM00342 207 290 9.9E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 Pfam PF02311 AraC-like ligand binding domain 38 100 1.0E-4 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 PANTHER PTHR11019 21 298 1.8E-45 T 23-04-2016 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 Gene3D G3DSA:1.10.10.60 189 243 2.3E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 SUPERFAMILY SSF46689 243 293 9.86E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 PANTHER PTHR11019:SF45 21 298 1.8E-45 T 23-04-2016 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 Pfam PF12833 Helix-turn-helix domain 213 291 6.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 SUPERFAMILY SSF51215 35 162 1.44E-10 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 Gene3D G3DSA:2.60.120.280 34 162 1.0E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS37160 9ef81a2115b0fd4c3e14e9ea3afc1b43 298 Gene3D G3DSA:1.10.10.60 244 292 4.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11225 e74c5e01df928af448691a26a2402679 80 Gene3D G3DSA:2.60.40.790 12 74 1.1E-19 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS11225 e74c5e01df928af448691a26a2402679 80 PANTHER PTHR11527:SF118 12 80 5.0E-14 T 23-04-2016 NIAKO_RS11225 e74c5e01df928af448691a26a2402679 80 PANTHER PTHR11527 12 80 5.0E-14 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS11225 e74c5e01df928af448691a26a2402679 80 Pfam PF00011 Hsp20/alpha crystallin family 14 79 7.5E-16 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS11225 e74c5e01df928af448691a26a2402679 80 SUPERFAMILY SSF49764 12 71 1.81E-19 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 SMART SM00342 193 276 1.3E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 Pfam PF02311 AraC-like ligand binding domain 16 77 4.1E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 Gene3D G3DSA:2.60.120.10 7 100 4.3E-11 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 Gene3D G3DSA:1.10.10.60 174 229 3.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 Pfam PF12833 Helix-turn-helix domain 201 278 3.3E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 PANTHER PTHR11019:SF65 22 284 5.0E-39 T 23-04-2016 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 PANTHER PTHR11019 22 284 5.0E-39 T 23-04-2016 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 SUPERFAMILY SSF51182 14 93 5.19E-10 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 SUPERFAMILY SSF46689 177 227 4.12E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 Gene3D G3DSA:1.10.10.60 230 280 3.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 SUPERFAMILY SSF46689 229 281 1.21E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04715 8af1c84b1cee2e0a029b33c9578bbdd5 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 SUPERFAMILY SSF54106 36 80 2.88E-6 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 SMART SM00257 102 146 0.17 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 SMART SM00257 37 80 4.4E-5 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 Pfam PF01476 LysM domain 104 145 0.12 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 Pfam PF01476 LysM domain 38 80 6.6E-4 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 Gene3D G3DSA:3.10.350.10 101 145 9.1E-6 T 23-04-2016 IPR018392 LysM domain NIAKO_RS22485 89c69b38df807b493066e285d1af580e 358 Gene3D G3DSA:3.10.350.10 37 80 4.2E-7 T 23-04-2016 IPR018392 LysM domain NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 PANTHER PTHR26402:SF151 6 217 2.2E-51 T 23-04-2016 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 SUPERFAMILY SSF52172 8 137 4.27E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 Gene3D G3DSA:3.40.50.2300 7 124 1.6E-27 T 23-04-2016 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 Pfam PF00072 Response regulator receiver domain 9 120 9.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 PANTHER PTHR26402 6 217 2.2E-51 T 23-04-2016 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 SMART SM00421 152 209 4.0E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 SUPERFAMILY SSF46894 139 215 5.44E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 SMART SM00448 6 120 1.7E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 2.9E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05220 7572993b5519b151025138e6ea61f3fc 217 Gene3D G3DSA:1.10.10.10 125 215 2.0E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 Pfam PF07971 Glycosyl hydrolase family 92 234 741 3.7E-145 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 Gene3D G3DSA:3.30.2080.10 605 749 5.0E-63 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 Gene3D G3DSA:2.70.98.10 34 302 1.0E-47 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 SUPERFAMILY SSF48208 250 739 7.31E-22 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 Gene3D G3DSA:1.20.1610.10 438 604 1.2E-45 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143:SF22 375 422 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143:SF22 450 746 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143:SF22 111 359 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143 375 422 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143 450 746 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 PANTHER PTHR12143 111 359 1.4E-111 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 Gene3D G3DSA:1.20.1050.60 337 422 2.2E-25 T 23-04-2016 NIAKO_RS15235 2c5c0d45935bcf802d14c382cbd16e3f 751 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 28 745 2.0E-188 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 104 668 3.0E-172 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Pfam PF00122 E1-E2 ATPase 137 356 3.0E-61 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 138 642 2.8E-83 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 579 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 215 229 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 365 379 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 517 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 496 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 595 1.9E-27 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Gene3D G3DSA:3.40.1110.10 387 487 3.3E-12 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 86 669 5.9E-175 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 121 666 2.2E-114 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Gene3D G3DSA:3.40.50.1000 339 381 7.6E-50 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Gene3D G3DSA:3.40.50.1000 488 628 7.6E-50 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF81665 609 630 8.11E-12 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF81665 266 359 8.11E-12 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF81665 105 169 8.11E-12 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF56784 363 383 5.11E-54 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF56784 423 665 5.11E-54 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 591 616 7.0E-8 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 560 576 7.0E-8 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PANTHER PTHR24093 23 669 1.2E-258 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Gene3D G3DSA:2.70.150.10 130 265 5.9E-26 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 PANTHER PTHR24093:SF332 23 669 1.2E-258 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 367 373 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 Pfam PF00702 haloacid dehalogenase-like hydrolase 361 574 7.9E-40 T 23-04-2016 NIAKO_RS21125 e39cac6c28ffb6d72d585e20a3b7c941 671 SUPERFAMILY SSF81653 168 265 3.27E-23 T 23-04-2016 NIAKO_RS29305 b0bcf51be34758818ec6191f995409cd 193 Pfam PF00027 Cyclic nucleotide-binding domain 30 117 1.3E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS29305 b0bcf51be34758818ec6191f995409cd 193 PANTHER PTHR24567 23 189 4.4E-25 T 23-04-2016 NIAKO_RS29305 b0bcf51be34758818ec6191f995409cd 193 Gene3D G3DSA:2.60.120.10 3 156 1.0E-37 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS29305 b0bcf51be34758818ec6191f995409cd 193 SUPERFAMILY SSF51206 18 141 1.83E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS29305 b0bcf51be34758818ec6191f995409cd 193 PANTHER PTHR24567:SF33 23 189 4.4E-25 T 23-04-2016 NIAKO_RS20340 6e14d2e88a9a41bdf4e9ef0fbdbad3bd 198 Pfam PF02577 Bifunctional nuclease 11 134 6.0E-43 T 23-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 NIAKO_RS20340 6e14d2e88a9a41bdf4e9ef0fbdbad3bd 198 PANTHER PTHR15160:SF1 7 191 1.2E-28 T 23-04-2016 NIAKO_RS20340 6e14d2e88a9a41bdf4e9ef0fbdbad3bd 198 PANTHER PTHR15160 7 191 1.2E-28 T 23-04-2016 NIAKO_RS20340 6e14d2e88a9a41bdf4e9ef0fbdbad3bd 198 SUPERFAMILY SSF103256 16 138 1.31E-37 T 23-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 SUPERFAMILY SSF46689 212 257 4.08E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 Pfam PF12833 Helix-turn-helix domain 181 257 6.2E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 PANTHER PTHR11019 174 266 6.5E-20 T 23-04-2016 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 PANTHER PTHR11019:SF126 174 266 6.5E-20 T 23-04-2016 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 Gene3D G3DSA:1.10.10.60 213 257 1.5E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 6.7E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 6.7E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 Gene3D G3DSA:1.10.10.60 177 212 1.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37120 9857c3791d9275079e2ff0f4b5af0bdc 279 SMART SM00342 175 258 5.1E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 SMART SM00345 13 72 2.2E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 PANTHER PTHR38445 1 110 4.8E-29 T 23-04-2016 NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 Gene3D G3DSA:1.10.10.10 2 73 2.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 2.9E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 PANTHER PTHR38445:SF2 1 110 4.8E-29 T 23-04-2016 NIAKO_RS00730 e21e4f88a1610ae5ecac008e02bb19d2 123 SUPERFAMILY SSF46785 2 82 8.61E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 Gene3D G3DSA:3.20.20.70 1 209 3.7E-57 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 PANTHER PTHR22854 1 210 2.3E-43 T 23-04-2016 NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 PANTHER PTHR22854:SF6 1 210 2.3E-43 T 23-04-2016 NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 211 30.004 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 SUPERFAMILY SSF51366 1 208 1.35E-48 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS01780 f5aa0b1ae6169ca79bf1f7a0c5eb93a0 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 206 1.0E-37 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 Gene3D G3DSA:1.10.1740.10 1 108 6.3E-21 T 23-04-2016 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 17 175 1.4E-43 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 SUPERFAMILY SSF88659 114 178 2.4E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 Pfam PF04542 Sigma-70 region 2 23 88 8.6E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 174 1.8E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 SUPERFAMILY SSF88946 1 96 1.62E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 PANTHER PTHR30173:SF20 1 188 3.3E-41 T 23-04-2016 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 Pfam PF08281 Sigma-70, region 4 121 166 7.0E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 PANTHER PTHR30173 1 188 3.3E-41 T 23-04-2016 NIAKO_RS11855 55870ad6aa9e0dd7a5f364958929e37a 199 Gene3D G3DSA:1.10.10.10 114 179 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 SMART SM00245 173 375 0.0095 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 Pfam PF03572 Peptidase family S41 202 336 3.9E-16 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 Gene3D G3DSA:3.90.226.10 178 394 1.8E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 SUPERFAMILY SSF52096 81 92 1.66E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 SUPERFAMILY SSF52096 196 390 1.66E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24970 72be428494a23a04d800bf0aaf12273e 436 PANTHER PTHR32060 97 334 9.7E-15 T 23-04-2016 NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Gene3D G3DSA:3.40.250.10 235 354 5.5E-16 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Gene3D G3DSA:3.40.250.10 361 455 4.6E-22 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SUPERFAMILY SSF52821 372 454 3.8E-23 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Pfam PF00581 Rhodanese-like domain 258 349 6.8E-10 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Pfam PF00581 Rhodanese-like domain 375 452 9.1E-13 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SMART SM00450 257 353 1.0E-4 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SMART SM00450 361 458 8.7E-20 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 PANTHER PTHR11935 1 294 7.5E-96 T 23-04-2016 NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SUPERFAMILY SSF52821 221 354 1.28E-19 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 PANTHER PTHR11935:SF9 1 294 7.5E-96 T 23-04-2016 NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SMART SM00849 12 180 3.8E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 SUPERFAMILY SSF56281 1 225 2.1E-53 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Gene3D G3DSA:3.60.15.10 3 228 1.2E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32845 500b56fbfab1712c25486a7ec8b4fc57 468 Pfam PF00753 Metallo-beta-lactamase superfamily 9 180 3.4E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 PANTHER PTHR11019 35 292 1.4E-35 T 23-04-2016 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 PANTHER PTHR11019:SF45 35 292 1.4E-35 T 23-04-2016 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 SUPERFAMILY SSF51215 27 164 4.97E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 Gene3D G3DSA:1.10.10.60 241 286 1.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 Gene3D G3DSA:1.10.10.60 185 237 7.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 SUPERFAMILY SSF46689 241 287 2.02E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 Gene3D G3DSA:2.60.120.280 24 164 6.3E-4 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 SMART SM00342 201 284 3.4E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20955 914fc2aca86b137d1abc62547d611d1e 294 Pfam PF12833 Helix-turn-helix domain 207 285 8.4E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 255 265 - T 23-04-2016 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 SMART SM00633 75 369 1.2E-91 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 Gene3D G3DSA:3.20.20.80 33 367 2.9E-103 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PRINTS PR00134 Glycosyl hydrolase family 10 signature 221 233 2.4E-16 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PRINTS PR00134 Glycosyl hydrolase family 10 signature 193 204 2.4E-16 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PRINTS PR00134 Glycosyl hydrolase family 10 signature 149 160 2.4E-16 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PRINTS PR00134 Glycosyl hydrolase family 10 signature 106 118 2.4E-16 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PANTHER PTHR31490 36 266 4.0E-88 T 23-04-2016 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 PANTHER PTHR31490 295 367 4.0E-88 T 23-04-2016 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 Pfam PF00331 Glycosyl hydrolase family 10 31 366 3.8E-103 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS12060 a7b4fd8f0983b1fd02745883498171ce 376 SUPERFAMILY SSF51445 28 368 2.08E-104 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 Gene3D G3DSA:1.10.10.60 246 293 7.9E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 Pfam PF12833 Helix-turn-helix domain 214 292 7.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 Gene3D G3DSA:1.10.10.60 199 242 3.1E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 PANTHER PTHR11019 21 294 4.7E-31 T 23-04-2016 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 2.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 2.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 SUPERFAMILY SSF46689 247 293 2.55E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 SMART SM00342 208 291 4.8E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17055 ca9b60c8af676d4c654d3f3d8b880add 295 PANTHER PTHR11019:SF50 21 294 4.7E-31 T 23-04-2016 NIAKO_RS16910 c46a0c566670a4ad626db450f0490e17 134 Pfam PF13564 DoxX-like family 20 119 2.8E-22 T 23-04-2016 IPR032808 DoxX family NIAKO_RS16910 c46a0c566670a4ad626db450f0490e17 134 PIRSF PIRSF030066 1 134 1.2E-44 T 23-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 NIAKO_RS23345 f80e3f07d5d50d23e3edde09f1bbc6fe 120 Gene3D G3DSA:1.10.10.60 66 112 7.8E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23345 f80e3f07d5d50d23e3edde09f1bbc6fe 120 SMART SM00342 33 112 5.6E-6 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23345 f80e3f07d5d50d23e3edde09f1bbc6fe 120 Pfam PF12833 Helix-turn-helix domain 43 112 5.1E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23345 f80e3f07d5d50d23e3edde09f1bbc6fe 120 SUPERFAMILY SSF46689 67 112 1.03E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 SUPERFAMILY SSF52540 1 160 2.2E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 SUPERFAMILY SSF52540 222 390 2.2E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 Pfam PF13175 AAA ATPase domain 1 386 5.4E-68 T 23-04-2016 NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 Gene3D G3DSA:3.40.50.300 240 389 7.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 Gene3D G3DSA:3.40.50.300 1 173 7.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23480 78dc18e15757b5c3817795f08c5e8f78 600 PANTHER PTHR32182 1 58 5.3E-12 T 23-04-2016 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 Gene3D G3DSA:3.30.565.10 305 453 1.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 PANTHER PTHR24423 173 453 2.3E-58 T 23-04-2016 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SMART SM00387 348 457 5.1E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SMART SM00304 179 232 4.4E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SUPERFAMILY SSF55874 289 453 4.98E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 Gene3D G3DSA:1.10.287.130 223 294 1.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 454 1.4E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 Pfam PF00672 HAMP domain 160 228 2.2E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SUPERFAMILY SSF47384 216 296 6.28E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SUPERFAMILY SSF158472 181 230 9.02E-9 T 23-04-2016 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 SMART SM00388 233 299 5.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS31420 2ae0bef264a013b763d5428f640bd510 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 295 9.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29990 a84f2b70a0c91ce4f4ed654564b214f9 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 81 1.5E-11 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS29990 a84f2b70a0c91ce4f4ed654564b214f9 163 SUPERFAMILY SSF53254 1 148 2.06E-28 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS29990 a84f2b70a0c91ce4f4ed654564b214f9 163 SMART SM00855 3 117 0.0017 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS29990 a84f2b70a0c91ce4f4ed654564b214f9 163 Gene3D G3DSA:3.40.50.1240 1 161 3.1E-46 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS29990 a84f2b70a0c91ce4f4ed654564b214f9 163 PANTHER PTHR23029 1 83 8.3E-12 T 23-04-2016 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 Gene3D G3DSA:3.30.465.10 322 421 3.3E-25 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 Pfam PF00571 CBS domain 276 327 9.6E-7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 SMART SM01091 341 423 3.4E-21 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 SMART SM00116 220 269 79.0 T 23-04-2016 IPR000644 CBS domain NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 SMART SM00116 279 327 7.8E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 SUPERFAMILY SSF54631 198 330 1.64E-27 T 23-04-2016 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 PANTHER PTHR22777 1 434 5.1E-157 T 23-04-2016 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 Gene3D G3DSA:3.10.580.10 196 321 9.9E-16 T 23-04-2016 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 SUPERFAMILY SSF56176 339 420 3.27E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 Pfam PF01595 Domain of unknown function DUF21 4 196 9.9E-51 T 23-04-2016 IPR002550 Domain of unknown function DUF21 NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 Pfam PF03471 Transporter associated domain 342 420 3.6E-17 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS21800 fda837fc3036bb8b6e6389ee8a9811da 436 PANTHER PTHR22777:SF8 1 434 5.1E-157 T 23-04-2016 NIAKO_RS28650 932b2773839c388881313d6f7a41a4a2 103 Gene3D G3DSA:2.60.40.10 16 75 1.3E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS28650 932b2773839c388881313d6f7a41a4a2 103 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 30 93 6.1E-9 T 23-04-2016 IPR032640 AMP-activated protein kinase, glycogen-binding domain NIAKO_RS28650 932b2773839c388881313d6f7a41a4a2 103 SUPERFAMILY SSF81296 26 103 3.18E-14 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS00780 52136708912eb554b5f61941b6f73f9f 195 PANTHER PTHR35008 13 194 4.0E-16 T 23-04-2016 NIAKO_RS00780 52136708912eb554b5f61941b6f73f9f 195 Gene3D G3DSA:1.10.760.10 106 180 3.4E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS00780 52136708912eb554b5f61941b6f73f9f 195 Gene3D G3DSA:1.10.760.10 42 64 3.4E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS00780 52136708912eb554b5f61941b6f73f9f 195 SUPERFAMILY SSF46626 41 71 2.78E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS00780 52136708912eb554b5f61941b6f73f9f 195 SUPERFAMILY SSF46626 109 192 2.78E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82693 41 134 3.14E-14 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:3.30.70.1430 41 138 4.4E-14 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82866 838 1058 4.19E-37 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:3.30.2090.10 746 836 2.6E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PANTHER PTHR32063:SF0 1 495 1.8E-252 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PANTHER PTHR32063:SF0 523 1060 1.8E-252 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82714 746 835 1.05E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:3.30.2090.10 182 262 2.1E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.8E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PANTHER PTHR32063 1 495 1.8E-252 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 PANTHER PTHR32063 523 1060 1.8E-252 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82693 267 323 1.2E-13 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Pfam PF00873 AcrB/AcrD/AcrF family 5 1054 1.4E-198 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82866 290 489 4.45E-40 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82714 183 263 2.49E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:3.30.70.1430 586 658 6.9E-4 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:1.10.3850.10 275 490 1.8E-53 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 Gene3D G3DSA:1.10.3850.10 847 1058 5.1E-45 T 23-04-2016 NIAKO_RS20385 c71ad3217cca14f960dc734417b646f7 1091 SUPERFAMILY SSF82693 136 181 1.2E-13 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 453 1.8E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 PANTHER PTHR22931:SF7 281 798 0.0 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 PANTHER PTHR22931:SF7 1 265 0.0 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 SUPERFAMILY SSF56059 1 384 5.18E-99 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 SUPERFAMILY SSF52009 346 463 2.62E-30 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Gene3D G3DSA:3.50.30.10 373 472 9.0E-32 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 PIRSF PIRSF000854 1 795 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Gene3D G3DSA:3.30.1490.20 1 191 1.4E-63 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 695 713 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 412 423 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 785 8.5E-58 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 PANTHER PTHR22931 281 798 0.0 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 PANTHER PTHR22931 1 265 0.0 T 23-04-2016 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 790 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Gene3D G3DSA:3.30.470.20 193 353 9.4E-54 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Gene3D G3DSA:3.20.20.60 484 791 4.5E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 341 1.3E-107 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 NIAKO_RS09250 3e465a32445e566317d4ccea9a7442c1 798 SUPERFAMILY SSF51621 480 788 7.85E-85 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 SUPERFAMILY SSF55120 12 222 8.0E-74 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 228 15.43 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 2.1E-53 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 PANTHER PTHR13767:SF2 13 224 5.1E-99 T 23-04-2016 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 220 5.2E-9 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 13 218 5.6E-69 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS09890 9aac64f2006575e786c15629ae82ab31 228 PANTHER PTHR13767 13 224 5.1E-99 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 Pfam PF04185 Phosphoesterase family 464 706 4.1E-10 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 PANTHER PTHR13833 156 338 1.1E-20 T 23-04-2016 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 SUPERFAMILY SSF51004 58 339 2.35E-45 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 Gene3D G3DSA:2.130.10.10 532 542 3.0E-36 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 Gene3D G3DSA:2.130.10.10 140 341 3.0E-36 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 Gene3D G3DSA:2.130.10.10 43 126 4.4E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 SUPERFAMILY SSF53649 469 736 3.14E-5 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 Pfam PF10282 Lactonase, 7-bladed beta-propeller 191 312 5.7E-11 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NIAKO_RS02585 9f1495ecf9832fa265f4ab3ac8a47f09 809 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 238 274 5.3E-8 T 23-04-2016 IPR011964 YVTN beta-propeller repeat NIAKO_RS01905 e2cfa0636affe1ff8a8b7a282456cb9a 105 PANTHER PTHR40112 1 103 5.1E-21 T 23-04-2016 NIAKO_RS01905 e2cfa0636affe1ff8a8b7a282456cb9a 105 SUPERFAMILY SSF51182 10 98 1.17E-21 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS01905 e2cfa0636affe1ff8a8b7a282456cb9a 105 Pfam PF07883 Cupin domain 30 88 1.2E-15 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS01905 e2cfa0636affe1ff8a8b7a282456cb9a 105 Gene3D G3DSA:2.60.120.10 13 103 1.4E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS29145 190b7b439c31ef819618280243ecd78f 316 Pfam PF07859 alpha/beta hydrolase fold 83 294 6.0E-23 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS29145 190b7b439c31ef819618280243ecd78f 316 SUPERFAMILY SSF53474 66 311 1.49E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS29145 190b7b439c31ef819618280243ecd78f 316 Gene3D G3DSA:3.40.50.1820 55 314 3.8E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS29145 190b7b439c31ef819618280243ecd78f 316 PANTHER PTHR23024 70 316 1.2E-29 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 SUPERFAMILY SSF51905 85 272 9.73E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 SUPERFAMILY SSF51905 469 520 9.73E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 Pfam PF01494 FAD binding domain 85 116 2.9E-6 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 86 105 2.6E-5 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 259 2.6E-5 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 85 107 5.0E-8 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 253 5.0E-8 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 521 524 5.0E-8 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PIRSF PIRSF038984 1 523 9.3E-193 T 23-04-2016 IPR028348 FAD dependent protein NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PANTHER PTHR10617 460 518 2.6E-146 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PANTHER PTHR10617 60 376 2.6E-146 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 Gene3D G3DSA:3.50.50.60 461 520 7.8E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 Gene3D G3DSA:3.50.50.60 86 274 7.8E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PANTHER PTHR10617:SF52 460 518 2.6E-146 T 23-04-2016 NIAKO_RS36240 3653440d88cb5a224c5947516d767e42 524 PANTHER PTHR10617:SF52 60 376 2.6E-146 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 751 7.1E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF05227 CHASE3 domain 37 168 1.2E-30 T 23-04-2016 IPR007891 CHASE3 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 691 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 749 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 730 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 705 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PANTHER PTHR24423 368 407 2.2E-143 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PANTHER PTHR24423 477 495 2.2E-143 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PANTHER PTHR24423 524 777 2.2E-143 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PANTHER PTHR24423 1071 1192 2.2E-143 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 PANTHER PTHR24423 1 14 2.2E-143 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:3.40.50.2300 1070 1190 5.6E-39 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF52172 1069 1190 8.4E-39 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF52172 920 1045 2.56E-14 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF52172 804 917 9.11E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF00072 Response regulator receiver domain 1074 1186 8.0E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF00072 Response regulator receiver domain 928 1030 5.1E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF00072 Response regulator receiver domain 806 913 3.8E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:1.10.287.130 518 590 1.5E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00387 641 752 2.7E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF47384 512 596 2.55E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00304 219 271 1.1E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:3.30.565.10 594 756 3.8E-49 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF55874 583 751 2.62E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:3.40.50.2300 803 917 2.6E-24 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:3.40.50.2300 922 1042 5.2E-15 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:1.20.5.340 445 501 3.2E-4 T 23-04-2016 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00388 526 594 6.1E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF13185 GAF domain 303 427 3.0E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Gene3D G3DSA:3.30.450.40 272 440 3.4E-17 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00448 804 914 1.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00448 1072 1186 6.2E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00448 926 1040 0.0061 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 594 8.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SMART SM00065 295 437 0.0022 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS13500 2ecbc5c110f40d697e7f649f1bd5be25 1192 SUPERFAMILY SSF55781 260 427 1.9E-23 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 PANTHER PTHR11777 28 208 1.9E-27 T 23-04-2016 NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 SMART SM00863 167 209 3.3E-7 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 PANTHER PTHR11777:SF17 28 208 1.9E-27 T 23-04-2016 NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 Pfam PF01411 tRNA synthetases class II (A) 14 87 4.0E-6 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 179 209 9.3E-6 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 SUPERFAMILY SSF50447 3 84 7.06E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS06425 e5c3da909093058b65894b3656916871 213 SUPERFAMILY SSF55186 85 211 6.54E-26 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NIAKO_RS14990 e56e75ad2cf981a4f895094c56a3ccf0 104 Pfam PF07377 Protein of unknown function (DUF1493) 1 95 5.7E-15 T 23-04-2016 IPR010862 Protein of unknown function DUF1493 NIAKO_RS14990 e56e75ad2cf981a4f895094c56a3ccf0 104 Gene3D G3DSA:1.10.1200.10 1 63 2.4E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 Gene3D G3DSA:2.170.130.10 116 224 1.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 PANTHER PTHR11532 1 387 2.3E-217 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 PANTHER PTHR11532 509 1050 2.3E-217 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 22 1052 2.7E-228 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 PANTHER PTHR11532:SF57 1 387 2.3E-217 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 PANTHER PTHR11532:SF57 509 1050 2.3E-217 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 Gene3D G3DSA:2.60.40.1120 23 115 5.9E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 193 222 7.7E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 216 6.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF49464 22 105 9.29E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 Pfam PF13715 CarboxypepD_reg-like domain 24 107 1.4E-12 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF56935 426 793 1.42E-57 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF56935 958 1052 1.42E-57 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF56935 103 240 1.42E-57 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF56935 867 911 1.42E-57 T 23-04-2016 NIAKO_RS14205 6896148a455e398995f25de5c3cec1af 1052 SUPERFAMILY SSF56935 302 392 1.42E-57 T 23-04-2016 NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 SUPERFAMILY SSF158997 3 46 6.67E-6 T 23-04-2016 NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 Gene3D G3DSA:3.40.50.150 233 337 2.1E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 Gene3D G3DSA:3.40.50.150 167 195 2.1E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 Gene3D G3DSA:2.20.25.10 4 44 9.4E-7 T 23-04-2016 NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 SMART SM01296 115 368 8.5E-4 T 23-04-2016 IPR012901 N2227-like KEGG: 00340+2.1.1.22 NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 SUPERFAMILY SSF53335 138 211 2.66E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 SUPERFAMILY SSF53335 249 379 2.66E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18660 5aabc74c7b504d2e9ca51c90ca460311 476 Pfam PF07942 N2227-like protein 124 367 1.8E-8 T 23-04-2016 IPR012901 N2227-like KEGG: 00340+2.1.1.22 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 SUPERFAMILY SSF52029 184 376 4.71E-84 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PANTHER PTHR11353 1 541 6.0E-238 T 23-04-2016 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 540 40.763 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 SUPERFAMILY SSF54849 141 196 2.9E-15 T 23-04-2016 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PRINTS PR00298 60kDa chaperonin signature 398 419 4.9E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PRINTS PR00298 60kDa chaperonin signature 82 109 4.9E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PRINTS PR00298 60kDa chaperonin signature 26 52 4.9E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PRINTS PR00298 60kDa chaperonin signature 268 291 4.9E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 PRINTS PR00298 60kDa chaperonin signature 350 375 4.9E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 2.8E-100 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 Gene3D G3DSA:1.10.560.10 367 518 3.0E-41 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 2.2E-256 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 SUPERFAMILY SSF48592 406 521 2.56E-74 T 23-04-2016 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 SUPERFAMILY SSF48592 7 133 2.56E-74 T 23-04-2016 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 Gene3D G3DSA:3.50.7.10 197 366 1.6E-94 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS14020 006d78ff4aba190e798b7c5c197181a6 542 Gene3D G3DSA:1.10.560.10 4 196 7.0E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 Gene3D G3DSA:3.40.810.20 187 426 1.3E-40 T 23-04-2016 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 PANTHER PTHR21432:SF18 7 424 2.1E-185 T 23-04-2016 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 SUPERFAMILY SSF100950 192 424 1.42E-59 T 23-04-2016 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 8 175 4.9E-24 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 268 419 3.0E-60 T 23-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 Gene3D G3DSA:3.40.1080.10 8 178 1.3E-62 T 23-04-2016 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 PANTHER PTHR21432 7 424 2.1E-185 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NIAKO_RS20855 44472b2223aa1bca52895f5fcc81ab6f 431 SUPERFAMILY SSF100950 8 219 2.65E-44 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 PANTHER PTHR10366:SF256 292 443 8.0E-114 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 PANTHER PTHR10366:SF256 467 588 8.0E-114 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 Pfam PF02719 Polysaccharide biosynthesis protein 293 598 1.1E-115 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 PANTHER PTHR10366 292 443 8.0E-114 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 PANTHER PTHR10366 467 588 8.0E-114 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 SUPERFAMILY SSF51735 290 580 6.88E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 Gene3D G3DSA:3.90.25.10 495 575 1.1E-6 T 23-04-2016 NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 Gene3D G3DSA:3.40.50.720 291 494 2.2E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26210 53c7db497eac75749fce180c22181db6 661 Gene3D G3DSA:3.40.50.720 173 245 9.0E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PANTHER PTHR23115 5 316 6.0E-57 T 23-04-2016 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 SUPERFAMILY SSF50447 218 307 2.91E-19 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.5E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.5E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.5E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PRINTS PR00315 GTP-binding elongation factor signature 64 72 3.5E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.5E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 Pfam PF00009 Elongation factor Tu GTP binding domain 4 187 6.6E-39 T 23-04-2016 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 SUPERFAMILY SSF50465 310 411 1.82E-26 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 Gene3D G3DSA:2.40.30.10 218 329 8.5E-19 T 23-04-2016 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 Gene3D G3DSA:3.40.50.300 3 208 5.9E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 4 411 6.9E-166 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 SUPERFAMILY SSF52540 4 208 2.52E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 1.1E-11 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS34345 82e7d7dcc7101472f2c92eb32845166a 412 Gene3D G3DSA:2.40.30.10 330 409 9.0E-8 T 23-04-2016 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.0E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.0E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.0E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 SUPERFAMILY SSF54909 68 146 8.76E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 PANTHER PTHR30154 1 149 1.9E-38 T 23-04-2016 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 Pfam PF01037 Lrp/AsnC ligand binding domain 83 142 8.8E-13 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 1.5E-16 T 23-04-2016 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 Gene3D G3DSA:1.10.10.10 6 83 3.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 PANTHER PTHR30154:SF2 1 149 1.9E-38 T 23-04-2016 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 Gene3D G3DSA:3.30.70.920 84 146 1.7E-18 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 SMART SM00344 8 114 6.2E-28 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS02230 458b6798e5cff3b02ec26de94ce7e79d 156 SUPERFAMILY SSF46785 7 67 2.35E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30920 3343433e4c3740fcfd8c352d4b1a8bd3 288 SUPERFAMILY SSF103088 159 275 6.41E-31 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS30920 3343433e4c3740fcfd8c352d4b1a8bd3 288 PANTHER PTHR30329 143 274 3.0E-35 T 23-04-2016 NIAKO_RS30920 3343433e4c3740fcfd8c352d4b1a8bd3 288 PANTHER PTHR30329:SF4 143 274 3.0E-35 T 23-04-2016 NIAKO_RS30920 3343433e4c3740fcfd8c352d4b1a8bd3 288 Pfam PF00691 OmpA family 167 267 6.5E-20 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS30920 3343433e4c3740fcfd8c352d4b1a8bd3 288 Gene3D G3DSA:3.30.1330.60 147 273 6.7E-33 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 Gene3D G3DSA:3.30.2080.10 592 735 5.2E-68 T 23-04-2016 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 Pfam PF07971 Glycosyl hydrolase family 92 231 727 2.6E-157 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 12 730 1.3E-203 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 PANTHER PTHR12143:SF22 11 745 0.0 T 23-04-2016 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 SUPERFAMILY SSF48208 256 723 1.7E-25 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 PANTHER PTHR12143 11 745 0.0 T 23-04-2016 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 Gene3D G3DSA:1.20.1610.10 434 591 1.3E-59 T 23-04-2016 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 Gene3D G3DSA:2.70.98.10 16 311 1.2E-88 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS06675 27c12b19d47d8a20e9d4a7a25a5aba4d 748 Gene3D G3DSA:1.20.1050.60 340 427 3.3E-28 T 23-04-2016 NIAKO_RS17905 9f1bb09f9078b4859da4332f817fdd56 377 Gene3D G3DSA:1.50.10.10 20 374 1.4E-88 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS17905 9f1bb09f9078b4859da4332f817fdd56 377 PANTHER PTHR33886:SF2 3 374 9.4E-90 T 23-04-2016 NIAKO_RS17905 9f1bb09f9078b4859da4332f817fdd56 377 PANTHER PTHR33886 3 374 9.4E-90 T 23-04-2016 NIAKO_RS17905 9f1bb09f9078b4859da4332f817fdd56 377 SUPERFAMILY SSF48208 39 375 6.01E-49 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17905 9f1bb09f9078b4859da4332f817fdd56 377 Pfam PF07470 Glycosyl Hydrolase Family 88 36 374 1.0E-77 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 194 227 49.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 154 187 0.0023 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 314 347 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 34 67 9.9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 234 267 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00028 274 307 93.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Gene3D G3DSA:1.25.40.10 124 250 1.6E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Gene3D G3DSA:1.25.40.10 42 83 1.6E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Gene3D G3DSA:3.30.565.10 606 736 1.4E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SUPERFAMILY SSF48452 37 148 2.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Pfam PF07730 Histidine kinase 540 604 6.4E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SUPERFAMILY SSF48452 274 383 3.29E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Pfam PF13424 Tetratricopeptide repeat 153 221 3.5E-11 T 23-04-2016 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SUPERFAMILY SSF48452 153 309 6.13E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 PANTHER PTHR24421 529 736 4.7E-37 T 23-04-2016 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 PANTHER PTHR24421 471 500 4.7E-37 T 23-04-2016 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 648 736 1.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SUPERFAMILY SSF55874 610 735 2.49E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 PANTHER PTHR24421:SF1 529 736 4.7E-37 T 23-04-2016 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 PANTHER PTHR24421:SF1 471 500 4.7E-37 T 23-04-2016 NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 SMART SM00387 646 737 4.8E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03365 441f6915d6282e56f1d1bb3e56270a70 737 Gene3D G3DSA:1.25.40.10 251 376 3.2E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 6.9E-206 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:1.20.1640.10 286 493 5.7E-48 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82693 41 133 6.63E-21 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:3.30.70.1430 41 139 2.1E-22 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PANTHER PTHR32063 1 1006 5.7E-294 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82714 705 789 3.4E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:3.30.2090.10 705 789 8.5E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:3.30.2090.10 181 265 7.2E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 5.0E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82866 288 484 3.66E-38 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:1.10.3850.10 795 1007 3.0E-52 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82714 182 265 5.36E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82866 788 1009 5.23E-43 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 SUPERFAMILY SSF82693 552 648 1.73E-6 T 23-04-2016 NIAKO_RS27145 0d3499dd92336186025b51af6a68793a 1012 Gene3D G3DSA:3.30.70.1430 553 648 3.7E-6 T 23-04-2016 NIAKO_RS08920 3e145b6a1911594bede1243d550986e5 893 Pfam PF06452 Carbohydrate family 9 binding domain-like 47 197 2.9E-9 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS08920 3e145b6a1911594bede1243d550986e5 893 Gene3D G3DSA:2.60.40.1190 36 218 8.3E-27 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS08920 3e145b6a1911594bede1243d550986e5 893 SUPERFAMILY SSF49344 35 232 4.32E-41 T 23-04-2016 NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 SUPERFAMILY SSF50104 106 146 8.6E-6 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 Gene3D G3DSA:2.30.30.30 111 147 2.6E-6 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 Pfam PF02357 Transcription termination factor nusG 6 96 6.3E-20 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 PANTHER PTHR30265 6 146 3.1E-25 T 23-04-2016 NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 SUPERFAMILY SSF82679 6 102 2.22E-24 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS26345 2c127ef10fdc8548474dd19e6c0852f5 166 Gene3D G3DSA:3.30.70.940 6 99 2.0E-12 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS04290 ff380ccd9f8a03d539a4c58f61159d0c 250 Gene3D G3DSA:3.40.50.150 150 241 3.6E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04290 ff380ccd9f8a03d539a4c58f61159d0c 250 SUPERFAMILY SSF53335 76 247 2.28E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04290 ff380ccd9f8a03d539a4c58f61159d0c 250 Pfam PF08241 Methyltransferase domain 150 195 9.1E-9 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 SUPERFAMILY SSF46785 9 79 1.09E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.1E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 SUPERFAMILY SSF53383 106 477 3.54E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 Gene3D G3DSA:1.10.10.10 7 76 2.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 SMART SM00345 16 75 4.9E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 Pfam PF00155 Aminotransferase class I and II 115 456 1.3E-33 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 PANTHER PTHR11751:SF314 95 479 3.6E-135 T 23-04-2016 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 Gene3D G3DSA:3.90.1150.10 359 477 3.1E-5 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 PANTHER PTHR11751 95 479 3.6E-135 T 23-04-2016 NIAKO_RS26120 7e8f32b4ab0338ab2fb531e7f223b722 479 Gene3D G3DSA:3.40.640.10 144 358 1.8E-68 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 PANTHER PTHR11019 50 300 7.0E-30 T 23-04-2016 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 PANTHER PTHR11019:SF50 50 300 7.0E-30 T 23-04-2016 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 Gene3D G3DSA:1.10.10.60 216 249 2.1E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 Pfam PF12833 Helix-turn-helix domain 220 298 1.8E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 SMART SM00342 214 297 2.7E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 4.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 4.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 SUPERFAMILY SSF46689 252 300 7.53E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12185 fd8aabc70b4d6ab1a4b7d4800fd4e17e 301 Gene3D G3DSA:1.10.10.60 252 299 1.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 Pfam PF01625 Peptide methionine sulfoxide reductase 45 198 2.9E-68 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 202 38.123 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 PANTHER PTHR10173:SF6 36 197 5.0E-82 T 23-04-2016 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 SUPERFAMILY SSF55068 33 208 3.27E-79 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 193 1.1E-64 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 Gene3D G3DSA:3.30.1060.10 16 197 3.3E-78 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS05085 211f7cb9d808509e85a369da4c8ae98c 218 PANTHER PTHR10173 36 197 5.0E-82 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 Pfam PF03054 tRNA methyl transferase 6 361 6.7E-109 T 23-04-2016 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 Gene3D G3DSA:2.30.30.280 228 283 6.7E-15 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 SUPERFAMILY SSF52402 2 254 6.62E-53 T 23-04-2016 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 362 39.078 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 Gene3D G3DSA:3.40.50.620 2 217 4.6E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 Gene3D G3DSA:2.40.30.10 286 363 3.5E-20 T 23-04-2016 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 361 5.2E-95 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 PANTHER PTHR11933:SF10 1 363 3.1E-147 T 23-04-2016 NIAKO_RS24790 657ccf6f7ba402177db6c76bac1699ca 367 PANTHER PTHR11933 1 363 3.1E-147 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NIAKO_RS32565 875064df88f65f98a81f1388dda1a07b 298 Pfam PF01148 Cytidylyltransferase family 9 295 5.6E-53 T 23-04-2016 NIAKO_RS32565 875064df88f65f98a81f1388dda1a07b 298 PANTHER PTHR13773 6 145 2.3E-44 T 23-04-2016 NIAKO_RS32565 875064df88f65f98a81f1388dda1a07b 298 PANTHER PTHR13773 162 294 2.3E-44 T 23-04-2016 NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 PANTHER PTHR11751 11 393 1.0E-157 T 23-04-2016 NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 Gene3D G3DSA:3.90.1150.10 272 393 1.5E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 Pfam PF00155 Aminotransferase class I and II 32 343 1.4E-54 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 SUPERFAMILY SSF53383 1 393 1.45E-96 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 PANTHER PTHR11751:SF404 11 393 1.0E-157 T 23-04-2016 NIAKO_RS01420 72c22b43b783d35fc5323a6da9a3aa68 397 Gene3D G3DSA:3.40.640.10 48 271 6.1E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 Gene3D G3DSA:3.50.50.60 2 106 7.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 4.7E-7 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.7E-7 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.7E-7 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 SUPERFAMILY SSF51905 6 188 5.38E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PANTHER PTHR10632 1 113 1.2E-18 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 SUPERFAMILY SSF51905 152 340 6.86E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.4E-9 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 1.4E-9 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-9 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 1.4E-9 T 23-04-2016 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 327 4.2E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30485 133921141c75fb815f275fdf77513913 424 Gene3D G3DSA:3.50.50.60 107 335 1.3E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS33050 4eb15ee95f2378e42a9616bde5daea50 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 71 193 2.6E-22 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS33050 4eb15ee95f2378e42a9616bde5daea50 276 SMART SM00644 63 194 6.5E-25 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS33050 4eb15ee95f2378e42a9616bde5daea50 276 SUPERFAMILY SSF55846 70 210 9.55E-45 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS33050 4eb15ee95f2378e42a9616bde5daea50 276 PANTHER PTHR30417 51 253 3.8E-39 T 23-04-2016 NIAKO_RS33050 4eb15ee95f2378e42a9616bde5daea50 276 Gene3D G3DSA:3.40.80.10 60 213 1.2E-47 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Pfam PF16355 Domain of unknown function (DUF4982) 628 686 9.1E-14 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PANTHER PTHR10066:SF71 539 650 6.9E-147 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PANTHER PTHR10066:SF71 19 522 6.9E-147 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PANTHER PTHR10066 539 650 6.9E-147 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PANTHER PTHR10066 19 522 6.9E-147 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 SUPERFAMILY SSF51445 304 601 1.3E-44 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Gene3D G3DSA:2.60.40.320 186 307 5.7E-22 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 SUPERFAMILY SSF49785 5 191 3.52E-40 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Gene3D G3DSA:2.60.40.1560 607 692 3.5E-13 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Gene3D G3DSA:3.20.20.80 318 602 7.8E-41 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Gene3D G3DSA:2.60.120.260 17 185 6.4E-42 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PRINTS PR00132 Glycosyl hydrolase family 2 signature 106 121 1.6E-9 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PRINTS PR00132 Glycosyl hydrolase family 2 signature 354 372 1.6E-9 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PRINTS PR00132 Glycosyl hydrolase family 2 signature 323 337 1.6E-9 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 PRINTS PR00132 Glycosyl hydrolase family 2 signature 418 433 1.6E-9 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 SUPERFAMILY SSF49785 793 892 3.15E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Pfam PF11721 Di-glucose binding within endoplasmic reticulum 726 890 1.3E-34 T 23-04-2016 IPR021720 Malectin NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 SUPERFAMILY SSF49303 200 306 4.89E-15 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 319 454 2.5E-14 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Gene3D G3DSA:2.60.120.360 799 897 1.4E-10 T 23-04-2016 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Pfam PF00703 Glycosyl hydrolases family 2 201 306 1.4E-14 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17795 c1ab6f1cb2a15b7860201a4b9617804d 1197 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 55 189 1.3E-13 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 PANTHER PTHR11760 2 241 8.5E-113 T 23-04-2016 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 5.6E-33 T 23-04-2016 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 SUPERFAMILY SSF54821 109 207 2.49E-34 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 Pfam PF07650 KH domain 38 112 1.0E-18 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 Gene3D G3DSA:3.30.1140.32 110 208 1.4E-37 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 Gene3D G3DSA:3.30.300.20 18 108 2.3E-30 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 PANTHER PTHR11760:SF19 2 241 8.5E-113 T 23-04-2016 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 SUPERFAMILY SSF54814 2 107 2.12E-35 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 35.928 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 3.1E-84 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NIAKO_RS22970 2598113b87cdf137ae90323c52e8c3b4 275 SMART SM00322 60 126 3.1E-7 T 23-04-2016 IPR004087 K Homology domain GO:0003676 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 Pfam PF00892 EamA-like transporter family 163 300 1.8E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 Pfam PF00892 EamA-like transporter family 12 146 3.5E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 PANTHER PTHR12715:SF5 9 303 6.6E-75 T 23-04-2016 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 SUPERFAMILY SSF103481 47 151 1.44E-11 T 23-04-2016 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 SUPERFAMILY SSF103481 225 303 1.7E-10 T 23-04-2016 NIAKO_RS09760 24ed84f5ba282372f03026e565c4f7ed 304 PANTHER PTHR12715 9 303 6.6E-75 T 23-04-2016 NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 PANTHER PTHR33619 61 80 3.1E-35 T 23-04-2016 NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 PANTHER PTHR33619 103 239 3.1E-35 T 23-04-2016 NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 Pfam PF10531 SLBB domain 157 207 2.4E-7 T 23-04-2016 IPR019554 Soluble ligand binding domain NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 Pfam PF02563 Polysaccharide biosynthesis/export protein 61 152 1.9E-18 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 Gene3D G3DSA:3.10.560.10 150 237 5.4E-16 T 23-04-2016 NIAKO_RS34995 92b070ceeb56e646e3f1d4553e586b47 273 Gene3D G3DSA:3.30.1950.10 65 149 7.9E-18 T 23-04-2016 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 Gene3D G3DSA:1.20.1250.20 212 389 1.1E-5 T 23-04-2016 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 384 1.6E-95 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 Pfam PF07690 Major Facilitator Superfamily 17 356 5.8E-44 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 PANTHER PTHR23502:SF19 6 413 4.5E-121 T 23-04-2016 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 PANTHER PTHR23502 6 413 4.5E-121 T 23-04-2016 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 Gene3D G3DSA:1.20.1250.20 12 191 9.8E-30 T 23-04-2016 NIAKO_RS20365 cfed7cb3b0da85e9557aefa4d9823413 415 SUPERFAMILY SSF103473 3 393 3.14E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 PANTHER PTHR23505:SF8 1 406 1.1E-144 T 23-04-2016 NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 SUPERFAMILY SSF103473 18 404 6.54E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 Gene3D G3DSA:1.20.1250.20 227 400 6.9E-23 T 23-04-2016 NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 Gene3D G3DSA:1.20.1250.20 31 192 1.6E-22 T 23-04-2016 NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 PANTHER PTHR23505 1 406 1.1E-144 T 23-04-2016 NIAKO_RS06935 9a88f6eedc42ffd83d6686e1e63569a3 406 Pfam PF07690 Major Facilitator Superfamily 28 262 2.7E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 PIRSF PIRSF000204 1 476 1.6E-175 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 Gene3D G3DSA:3.40.50.1220 299 475 1.2E-82 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 PANTHER PTHR10160 4 477 1.7E-209 T 23-04-2016 NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 PANTHER PTHR10160:SF24 4 477 1.7E-209 T 23-04-2016 NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 SUPERFAMILY SSF52467 302 475 8.18E-70 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS22505 8592051118cec5dcbb32c23486aa0e90 477 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 471 1.9E-178 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 SUPERFAMILY SSF144091 84 241 1.16E-38 T 23-04-2016 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 SUPERFAMILY SSF144091 12 49 1.16E-38 T 23-04-2016 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 Pfam PF01694 Rhomboid family 89 240 8.5E-34 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 Gene3D G3DSA:1.20.1540.10 16 51 5.6E-41 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 Gene3D G3DSA:1.20.1540.10 83 239 5.6E-41 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 PANTHER PTHR22936 16 33 4.4E-38 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS25615 8407ab32edd19020fab53b7c1db0427d 258 PANTHER PTHR22936 66 243 4.4E-38 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 4 311 1.5E-82 T 23-04-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 PANTHER PTHR11048:SF7 67 312 4.5E-54 T 23-04-2016 NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 PANTHER PTHR11048:SF7 1 44 4.5E-54 T 23-04-2016 NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 PANTHER PTHR11048 67 312 4.5E-54 T 23-04-2016 NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 PANTHER PTHR11048 1 44 4.5E-54 T 23-04-2016 NIAKO_RS21745 842f2cd7c15ef7912b0997dab75a46db 319 Pfam PF01040 UbiA prenyltransferase family 68 292 6.3E-47 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NIAKO_RS28260 fcc7c93c8617dcec9f976bb9018260f2 483 PANTHER PTHR35148 1 470 1.6E-36 T 23-04-2016 NIAKO_RS28260 fcc7c93c8617dcec9f976bb9018260f2 483 SUPERFAMILY SSF48452 20 483 1.39E-102 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28260 fcc7c93c8617dcec9f976bb9018260f2 483 Pfam PF12771 Starch-binding associating with outer membrane 1 466 2.5E-43 T 23-04-2016 NIAKO_RS02285 a212d5e5272fe9eb0265f2b857c4ed3c 144 PANTHER PTHR38009 1 144 2.9E-29 T 23-04-2016 NIAKO_RS02285 a212d5e5272fe9eb0265f2b857c4ed3c 144 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 4 142 4.0E-39 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 NIAKO_RS02285 a212d5e5272fe9eb0265f2b857c4ed3c 144 Pfam PF06841 T4-like virus tail tube protein gp19 8 141 7.5E-43 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 NIAKO_RS02285 a212d5e5272fe9eb0265f2b857c4ed3c 144 PANTHER PTHR38009:SF1 1 144 2.9E-29 T 23-04-2016 NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 Pfam PF09424 Yqey-like protein 5 148 3.2E-49 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 PANTHER PTHR28055:SF1 1 150 3.1E-44 T 23-04-2016 NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 PANTHER PTHR28055 1 150 3.1E-44 T 23-04-2016 NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 Gene3D G3DSA:1.10.1510.10 1 92 9.8E-27 T 23-04-2016 NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 Gene3D G3DSA:1.10.10.410 93 149 9.7E-25 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal NIAKO_RS32405 7299ad29d45c7e12a325b66d0a22e255 150 SUPERFAMILY SSF89095 1 148 2.88E-39 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NIAKO_RS22015 cafc7b250e43243ec509d27c1d6050cf 91 Gene3D G3DSA:3.30.70.100 4 88 3.0E-27 T 23-04-2016 NIAKO_RS22015 cafc7b250e43243ec509d27c1d6050cf 91 SUPERFAMILY SSF54975 4 88 8.07E-26 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NIAKO_RS22015 cafc7b250e43243ec509d27c1d6050cf 91 Pfam PF00708 Acylphosphatase 1 88 1.2E-24 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NIAKO_RS22015 cafc7b250e43243ec509d27c1d6050cf 91 PANTHER PTHR10029 4 91 1.6E-21 T 23-04-2016 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 SUPERFAMILY SSF46689 185 233 6.8E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 PANTHER PTHR11019 21 292 2.2E-32 T 23-04-2016 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 280 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 PANTHER PTHR11019:SF65 21 292 2.2E-32 T 23-04-2016 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 Gene3D G3DSA:2.60.120.10 24 76 4.6E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 SMART SM00342 200 284 1.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 Gene3D G3DSA:1.10.10.60 185 236 3.8E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 SUPERFAMILY SSF46689 237 287 4.12E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 Pfam PF12833 Helix-turn-helix domain 206 284 2.0E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 Gene3D G3DSA:1.10.10.60 237 283 3.0E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 SUPERFAMILY SSF51182 24 78 2.19E-7 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS25860 44ce9f506e332b8e46155a7c0e613c0d 292 Pfam PF02311 AraC-like ligand binding domain 27 79 6.7E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PANTHER PTHR10066 543 691 3.6E-206 T 23-04-2016 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PANTHER PTHR10066 28 505 3.6E-206 T 23-04-2016 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 298 518 9.8E-30 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Gene3D G3DSA:2.60.40.920 702 801 1.8E-8 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PANTHER PTHR10066:SF71 543 691 3.6E-206 T 23-04-2016 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PANTHER PTHR10066:SF71 28 505 3.6E-206 T 23-04-2016 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Pfam PF16355 Domain of unknown function (DUF4982) 628 688 7.3E-21 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Gene3D G3DSA:2.60.40.1560 617 701 1.9E-24 T 23-04-2016 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 SUPERFAMILY SSF51445 288 610 2.95E-72 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 28 175 3.6E-31 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 404 418 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Gene3D G3DSA:2.60.120.260 24 167 9.1E-48 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Gene3D G3DSA:2.60.40.320 168 290 6.7E-32 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Pfam PF00703 Glycosyl hydrolases family 2 181 291 3.3E-17 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 SUPERFAMILY SSF49373 697 801 6.54E-8 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 404 419 2.6E-13 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 303 317 2.6E-13 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 108 123 2.6E-13 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 334 352 2.6E-13 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 Gene3D G3DSA:3.20.20.80 291 613 1.7E-81 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 SUPERFAMILY SSF49785 11 179 1.03E-47 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11780 6f2c06b26eb497e42b5dde3c7d901745 806 SUPERFAMILY SSF49303 185 291 1.99E-19 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 Pfam PF17162 Domain of unknown function (DUF5118) 51 100 3.1E-21 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 Pfam PF16313 Met-zincin 435 746 3.4E-113 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 SUPERFAMILY SSF55486 254 528 1.29E-23 T 23-04-2016 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 Pfam PF17148 Domain of unknown function (DUF5117) 113 303 5.0E-58 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 Gene3D G3DSA:3.40.390.10 294 529 1.7E-14 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS19940 68cff6dea3c1660d397184a0a0b64703 846 PANTHER PTHR38478 1 763 3.8E-129 T 23-04-2016 NIAKO_RS10960 f1887276a0574699fadc45981553c4fb 472 SUPERFAMILY SSF53474 62 236 1.7E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10960 f1887276a0574699fadc45981553c4fb 472 Gene3D G3DSA:3.40.50.1820 66 235 9.4E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10960 f1887276a0574699fadc45981553c4fb 472 Pfam PF10503 Esterase PHB depolymerase 131 185 2.4E-5 T 23-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 PANTHER PTHR33446:SF2 85 272 5.3E-15 T 23-04-2016 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 199 271 4.1E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 SUPERFAMILY SSF74653 171 272 3.66E-16 T 23-04-2016 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 SUPERFAMILY SSF74653 86 99 3.66E-16 T 23-04-2016 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 Gene3D G3DSA:3.30.1150.10 179 272 1.1E-6 T 23-04-2016 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 PANTHER PTHR33446 85 272 5.3E-15 T 23-04-2016 NIAKO_RS34860 b7498851920bed565973be57e4613f61 275 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 195 271 3.6E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 Gene3D G3DSA:1.10.10.10 9 80 9.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 SMART SM00345 22 81 2.5E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 PANTHER PTHR11751:SF10 104 487 6.3E-69 T 23-04-2016 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 Gene3D G3DSA:3.90.1150.10 371 487 1.4E-5 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 Gene3D G3DSA:3.40.640.10 159 370 1.4E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 SUPERFAMILY SSF53383 133 487 9.55E-79 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 Pfam PF00155 Aminotransferase class I and II 158 430 2.4E-21 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.8E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 PANTHER PTHR11751 104 487 6.3E-69 T 23-04-2016 NIAKO_RS35560 c0ddd9d67c0d532a0a062d5908d814cc 489 SUPERFAMILY SSF46785 15 83 1.95E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27335 18480f3008cbad60c46192410cdbc01c 375 SUPERFAMILY SSF53756 1 358 4.49E-50 T 23-04-2016 NIAKO_RS27335 18480f3008cbad60c46192410cdbc01c 375 PANTHER PTHR12526 1 357 5.2E-29 T 23-04-2016 NIAKO_RS27335 18480f3008cbad60c46192410cdbc01c 375 Pfam PF00534 Glycosyl transferases group 1 187 322 8.1E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS27335 18480f3008cbad60c46192410cdbc01c 375 Pfam PF13439 Glycosyltransferase Family 4 11 182 8.6E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS27335 18480f3008cbad60c46192410cdbc01c 375 Gene3D G3DSA:3.40.50.2000 183 314 4.3E-11 T 23-04-2016 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF51055 1141 1197 3.4E-15 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Pfam PF00704 Glycosyl hydrolases family 18 714 1024 3.3E-27 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Pfam PF00704 Glycosyl hydrolases family 18 50 477 1.4E-57 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 ProSitePatterns PS01095 Chitinases family 18 active site. 235 243 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 ProSitePatterns PS01095 Chitinases family 18 active site. 818 826 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:3.20.20.80 711 1031 2.8E-60 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:2.10.10.20 1145 1198 5.7E-17 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF49299 1217 1294 8.44E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00089 519 608 0.19 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00089 1051 1138 1.0 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00089 1207 1296 2.4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF49299 515 607 4.19E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:3.20.20.80 37 368 2.8E-74 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:3.20.20.80 454 502 2.8E-74 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF51445 41 364 2.59E-68 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Pfam PF02839 Carbohydrate binding domain 1150 1191 9.1E-12 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:3.10.50.10 402 451 3.0E-4 T 23-04-2016 IPR029070 Chitinase insertion domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF51445 449 482 2.59E-68 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 PANTHER PTHR11177:SF195 683 922 1.6E-76 T 23-04-2016 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 PANTHER PTHR11177:SF195 970 1039 1.6E-76 T 23-04-2016 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:2.60.40.1560 612 701 4.1E-4 T 23-04-2016 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00636 48 477 1.5E-54 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SUPERFAMILY SSF51445 711 1032 3.41E-51 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 Gene3D G3DSA:2.60.40.670 517 606 6.6E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00495 1148 1194 1.6E-14 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 SMART SM00495 1306 1351 4.0 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 PANTHER PTHR11177 683 922 1.6E-76 T 23-04-2016 NIAKO_RS36360 a4d01b78a69c84d3f16feff316226fcc 1457 PANTHER PTHR11177 970 1039 1.6E-76 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Pfam PF02368 Bacterial Ig-like domain (group 2) 606 685 3.0E-17 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1312 1383 1.4E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF141072 691 801 6.8E-18 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 439 462 910.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 359 380 18.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 473 494 8600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 1050 1072 9800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 571 592 6000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 882 904 2800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 383 405 750.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 415 438 50.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 508 530 620.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00710 533 569 2900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00635 606 684 4.9E-17 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Pfam PF06452 Carbohydrate family 9 binding domain-like 1113 1286 2.2E-36 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Pfam PF06452 Carbohydrate family 9 binding domain-like 817 999 9.1E-45 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 1110 1285 2.0E-16 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 815 971 2.0E-17 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Gene3D G3DSA:2.160.20.10 187 603 4.1E-44 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF49344 1104 1286 1.77E-38 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF49344 813 998 3.81E-40 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF49373 605 687 1.41E-16 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Gene3D G3DSA:2.60.40.1190 1106 1286 1.7E-40 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Gene3D G3DSA:2.60.40.1190 813 1000 3.0E-43 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Pfam PF12708 Pectate lyase superfamily protein 205 432 2.2E-13 T 23-04-2016 IPR024535 Pectate lyase superfamily protein NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 Gene3D G3DSA:2.60.40.1080 605 688 2.6E-20 T 23-04-2016 NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00089 1006 1098 0.011 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SMART SM00089 609 690 7.6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF51126 187 554 4.45E-36 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS36515 61dfa314b4cd34c31f98be1933c52dd2 1383 SUPERFAMILY SSF49299 1007 1096 2.51E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 Gene3D G3DSA:2.60.120.280 43 177 1.2E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 SUPERFAMILY SSF46689 241 292 2.06E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 Gene3D G3DSA:1.10.10.60 242 291 3.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 Gene3D G3DSA:1.10.10.60 196 241 4.8E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 SMART SM00342 205 288 5.8E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 Pfam PF12833 Helix-turn-helix domain 211 289 3.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 SUPERFAMILY SSF51215 46 176 2.75E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS13945 10590b6ff025141cc945f6a5ca24aac0 295 PANTHER PTHR11019 45 295 7.2E-31 T 23-04-2016 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 Gene3D G3DSA:1.10.1740.10 8 116 7.9E-24 T 23-04-2016 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 Gene3D G3DSA:1.10.10.10 119 183 2.1E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 PANTHER PTHR30173 1 187 2.9E-40 T 23-04-2016 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 2.3E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 SUPERFAMILY SSF88659 101 182 2.24E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 Pfam PF04542 Sigma-70 region 2 27 94 1.9E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 PANTHER PTHR30173:SF20 1 187 2.9E-40 T 23-04-2016 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 Pfam PF08281 Sigma-70, region 4 124 175 2.7E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17225 01a68850f7bed74b406ec75a8679b8ac 203 SUPERFAMILY SSF88946 7 103 2.86E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03570 8f3516190e35e57a0191919b7a6e1fdb 486 Gene3D G3DSA:2.30.180.10 39 158 6.7E-14 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03570 8f3516190e35e57a0191919b7a6e1fdb 486 SUPERFAMILY SSF82153 39 159 4.45E-15 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03570 8f3516190e35e57a0191919b7a6e1fdb 486 Pfam PF02469 Fasciclin domain 51 157 2.0E-12 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 Gene3D G3DSA:3.40.50.620 1 245 3.3E-67 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 PANTHER PTHR21294 1 247 1.9E-63 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 PIRSF PIRSF000090 1 247 6.8E-56 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 PANTHER PTHR21294:SF0 1 247 1.9E-63 T 23-04-2016 NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 SMART SM00893 23 211 1.2E-37 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 SUPERFAMILY SSF52402 1 242 2.79E-59 T 23-04-2016 NIAKO_RS20330 95cdbef9b00465776320cda9e8ba4062 247 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.8E-32 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SUPERFAMILY SSF52172 234 355 1.18E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SMART SM00387 97 213 1.4E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 138 152 1.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 173 191 1.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 166 1.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 210 1.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Gene3D G3DSA:3.40.50.2300 228 356 3.3E-41 T 23-04-2016 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Gene3D G3DSA:3.30.565.10 51 214 8.5E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 97 212 1.0E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SMART SM00448 235 350 2.7E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SUPERFAMILY SSF47384 1 47 1.96E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SUPERFAMILY SSF47226 333 346 8.11E-20 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SUPERFAMILY SSF47226 379 478 8.11E-20 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Pfam PF00072 Response regulator receiver domain 237 348 1.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Gene3D G3DSA:1.20.120.160 391 479 5.8E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 SUPERFAMILY SSF55874 39 212 1.57E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 2 47 1.0E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 Pfam PF01627 Hpt domain 400 479 8.1E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS29610 3c39968583c7132255e2cf27ec8cdec2 490 PANTHER PTHR24423 1 389 2.7E-127 T 23-04-2016 NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 SUPERFAMILY SSF81296 113 187 3.92E-11 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 SUPERFAMILY SSF49785 197 356 2.43E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 Gene3D G3DSA:2.60.120.360 247 368 2.1E-7 T 23-04-2016 NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 Gene3D G3DSA:2.60.40.10 35 108 2.1E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 Gene3D G3DSA:2.60.40.10 114 187 3.0E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS13065 e3645e22f5cdc2e8ab297de491c83527 369 SUPERFAMILY SSF81296 31 103 2.64E-6 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 Pfam PF12704 MacB-like periplasmic core domain 20 232 8.2E-23 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 Pfam PF12704 MacB-like periplasmic core domain 514 606 1.3E-8 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 Pfam PF02687 FtsX-like permease family 682 795 5.3E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 Pfam PF02687 FtsX-like permease family 297 411 2.7E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 PANTHER PTHR30572 119 363 3.5E-73 T 23-04-2016 NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 PANTHER PTHR30572 411 802 3.5E-73 T 23-04-2016 NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 PANTHER PTHR30572:SF4 119 363 3.5E-73 T 23-04-2016 NIAKO_RS15580 2a01883307cf8e1160624a5eee296e72 802 PANTHER PTHR30572:SF4 411 802 3.5E-73 T 23-04-2016 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 SUPERFAMILY SSF51338 385 422 1.75E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 SUPERFAMILY SSF51338 19 76 1.75E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 Gene3D G3DSA:2.30.40.10 370 394 2.3E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 PANTHER PTHR11271:SF33 28 423 2.3E-104 T 23-04-2016 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 Gene3D G3DSA:2.30.40.10 395 423 4.4E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 Gene3D G3DSA:2.30.40.10 19 77 4.4E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 Gene3D G3DSA:3.20.20.140 78 369 1.5E-98 T 23-04-2016 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 SUPERFAMILY SSF51556 76 385 1.41E-111 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 Pfam PF01979 Amidohydrolase family 72 420 1.4E-55 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS34670 4a5455af9a68fb43068ccb51297f35e5 423 PANTHER PTHR11271 28 423 2.3E-104 T 23-04-2016 NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 SUPERFAMILY SSF53383 2 355 2.02E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 PANTHER PTHR30244:SF9 1 359 6.6E-121 T 23-04-2016 NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 PANTHER PTHR30244 1 359 6.6E-121 T 23-04-2016 NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 PIRSF PIRSF000390 1 359 3.1E-106 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 Gene3D G3DSA:3.90.1150.10 241 356 4.1E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 Gene3D G3DSA:3.40.640.10 2 238 1.3E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS26315 bc0e64e8a9e06e89910b936845165758 359 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 352 7.5E-94 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 362 1.0E-81 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 Gene3D G3DSA:3.40.710.10 580 970 3.2E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 PANTHER PTHR30480:SF5 30 557 1.6E-108 T 23-04-2016 NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 SUPERFAMILY SSF56601 590 962 1.28E-68 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 SUPERFAMILY SSF52279 401 564 6.28E-5 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 Gene3D G3DSA:3.20.20.300 50 386 1.8E-91 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 SUPERFAMILY SSF51445 28 387 5.16E-89 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 PANTHER PTHR30480 30 557 1.6E-108 T 23-04-2016 NIAKO_RS32680 6252bdec9f0c85c8f3af0b1d8daa434a 975 Pfam PF00144 Beta-lactamase 593 951 3.2E-49 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Gene3D G3DSA:3.30.465.10 98 264 1.1E-17 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 SUPERFAMILY SSF46548 505 624 6.45E-17 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Pfam PF02754 Cysteine-rich domain 840 920 0.0038 T 23-04-2016 IPR004017 Cysteine-rich domain NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Gene3D G3DSA:1.10.1060.10 494 627 5.5E-20 T 23-04-2016 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 SUPERFAMILY SSF56176 6 264 1.51E-49 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Pfam PF02913 FAD linked oxidases, C-terminal domain 268 514 1.8E-47 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 PANTHER PTHR11748:SF65 220 562 1.2E-202 T 23-04-2016 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 PANTHER PTHR11748:SF65 3 181 1.2E-202 T 23-04-2016 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Gene3D G3DSA:3.30.43.10 5 91 1.1E-20 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 PANTHER PTHR11748 220 562 1.2E-202 T 23-04-2016 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 PANTHER PTHR11748 3 181 1.2E-202 T 23-04-2016 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Pfam PF01565 FAD binding domain 41 177 7.2E-30 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 Pfam PF13183 4Fe-4S dicluster domain 537 610 4.9E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS17245 92598d82792880e78c73519ad45cded6 940 SUPERFAMILY SSF55103 269 523 7.19E-48 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 SUPERFAMILY SSF52540 3 237 7.71E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 Gene3D G3DSA:3.40.50.300 3 234 5.6E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 Pfam PF00005 ABC transporter 19 158 1.2E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 SUPERFAMILY SSF50331 251 321 2.58E-8 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 Pfam PF08402 TOBE domain 259 321 2.5E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 PANTHER PTHR24220 5 237 1.3E-70 T 23-04-2016 NIAKO_RS14500 c811a4f6f67c4493258cc4ff286bb7a4 322 SMART SM00382 28 208 3.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 Gene3D G3DSA:3.40.50.1820 677 934 4.0E-25 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 Gene3D G3DSA:2.130.10.10 368 474 2.1E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 Gene3D G3DSA:2.130.10.10 167 273 2.1E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731 468 491 2.7E-40 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731 612 944 2.7E-40 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731 513 588 2.7E-40 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 SUPERFAMILY SSF82171 204 547 1.31E-6 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 SUPERFAMILY SSF53474 675 933 7.15E-25 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731:SF142 468 491 2.7E-40 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731:SF142 612 944 2.7E-40 T 23-04-2016 NIAKO_RS23375 974bf8248c17cf3c0895ae0815df8a99 1035 PANTHER PTHR11731:SF142 513 588 2.7E-40 T 23-04-2016 NIAKO_RS31750 0a3f9a34a04fc97707036e4b67e43f7d 177 PANTHER PTHR36558 3 177 5.4E-22 T 23-04-2016 NIAKO_RS31750 0a3f9a34a04fc97707036e4b67e43f7d 177 Gene3D G3DSA:3.90.1570.10 9 161 1.3E-32 T 23-04-2016 IPR012296 Nuclease, putative, TT1808 NIAKO_RS31750 0a3f9a34a04fc97707036e4b67e43f7d 177 Pfam PF05685 Putative restriction endonuclease 13 159 4.8E-31 T 23-04-2016 IPR008538 Domain of unknown function DUF820 NIAKO_RS31750 0a3f9a34a04fc97707036e4b67e43f7d 177 SUPERFAMILY SSF52980 6 177 6.97E-32 T 23-04-2016 IPR011335 Restriction endonuclease type II-like NIAKO_RS31750 0a3f9a34a04fc97707036e4b67e43f7d 177 PANTHER PTHR36558:SF1 3 177 5.4E-22 T 23-04-2016 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 PANTHER PTHR22976:SF19 3 321 3.3E-198 T 23-04-2016 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 PIRSF PIRSF001619 1 319 3.6E-141 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 TIGRFAM TIGR00433 bioB: biotin synthase 13 310 1.1E-120 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 Gene3D G3DSA:3.20.20.70 4 314 7.6E-101 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 SMART SM00876 220 312 2.6E-42 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.0E-21 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 Pfam PF04055 Radical SAM superfamily 49 206 2.0E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 SMART SM00729 42 255 1.4E-38 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 Hamap MF_01694 Biotin synthase [bioB]. 4 313 41.252 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 PANTHER PTHR22976 3 321 3.3E-198 T 23-04-2016 NIAKO_RS18105 5ec8e8e0d90051f2f8d48b8eb01c2e27 324 SUPERFAMILY SSF102114 4 313 9.42E-88 T 23-04-2016 NIAKO_RS16880 5b55933bb3806e6f716dc2fc26ca79fc 873 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 692 776 1.3E-5 T 23-04-2016 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10|KEGG: 00510+3.2.1.106 NIAKO_RS16880 5b55933bb3806e6f716dc2fc26ca79fc 873 PANTHER PTHR10412:SF10 4 868 0.0 T 23-04-2016 NIAKO_RS16880 5b55933bb3806e6f716dc2fc26ca79fc 873 PANTHER PTHR10412 4 868 0.0 T 23-04-2016 IPR004888 Glycoside hydrolase family 63 GO:0004573|GO:0009311 NIAKO_RS16880 5b55933bb3806e6f716dc2fc26ca79fc 873 SUPERFAMILY SSF48208 374 614 4.85E-41 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS16880 5b55933bb3806e6f716dc2fc26ca79fc 873 SUPERFAMILY SSF48208 674 868 4.85E-41 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 PANTHER PTHR12083:SF8 2 35 3.8E-21 T 23-04-2016 NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 PANTHER PTHR12083:SF8 52 135 3.8E-21 T 23-04-2016 NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 Gene3D G3DSA:3.40.50.300 1 118 3.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 Pfam PF13671 AAA domain 2 122 1.3E-19 T 23-04-2016 NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 SUPERFAMILY SSF52540 1 159 1.22E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 PANTHER PTHR12083 2 35 3.8E-21 T 23-04-2016 NIAKO_RS11395 0ec135482a62fd963d5f2711dfdf6fb7 167 PANTHER PTHR12083 52 135 3.8E-21 T 23-04-2016 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 PANTHER PTHR30203:SF4 7 412 1.8E-53 T 23-04-2016 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 Pfam PF02321 Outer membrane efflux protein 235 412 8.1E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 Pfam PF02321 Outer membrane efflux protein 30 211 6.4E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 Gene3D G3DSA:1.20.1600.10 26 403 1.5E-21 T 23-04-2016 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 SUPERFAMILY SSF56954 2 410 1.96E-40 T 23-04-2016 NIAKO_RS12085 fe2134304dc00f5c0b5a4576f277cb7f 417 PANTHER PTHR30203 7 412 1.8E-53 T 23-04-2016 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Gene3D G3DSA:3.30.365.10 49 177 4.7E-31 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 PANTHER PTHR11908:SF79 121 718 2.0E-242 T 23-04-2016 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Gene3D G3DSA:3.90.1170.50 179 286 3.1E-21 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Gene3D G3DSA:3.30.365.10 384 550 9.3E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 SUPERFAMILY SSF56003 314 718 1.96E-123 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Gene3D G3DSA:3.30.365.10 551 718 1.4E-47 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 588 667 1.2E-16 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 49 193 3.1E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 314 548 3.1E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 SMART SM01008 210 288 1.5E-21 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 PANTHER PTHR11908 121 718 2.0E-242 T 23-04-2016 NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 PIRSF PIRSF036389 1 719 1.0E-260 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NIAKO_RS15090 ad2efccce2021b874a552115c4c94667 720 SUPERFAMILY SSF56003 46 243 5.58E-40 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 SUPERFAMILY SSF51735 101 244 4.73E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.3E-16 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 Gene3D G3DSA:3.40.192.10 1 105 2.2E-30 T 23-04-2016 NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 Gene3D G3DSA:3.40.50.720 106 244 1.9E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 PANTHER PTHR21089 1 244 4.7E-71 T 23-04-2016 NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 SUPERFAMILY SSF53223 2 100 8.63E-21 T 23-04-2016 NIAKO_RS23100 fba2d9cdf7693960e31e881cc97d742d 244 PANTHER PTHR21089:SF1 1 244 4.7E-71 T 23-04-2016 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 SUPERFAMILY SSF48208 524 701 2.72E-7 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 PANTHER PTHR31987 1 87 4.8E-219 T 23-04-2016 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 PANTHER PTHR31987 233 816 4.8E-219 T 23-04-2016 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 PANTHER PTHR31987:SF1 1 87 4.8E-219 T 23-04-2016 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 PANTHER PTHR31987:SF1 233 816 4.8E-219 T 23-04-2016 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 Pfam PF17168 Domain of unknown function (DUF5127) 248 469 2.6E-52 T 23-04-2016 IPR033433 Domain of unknown function DUF5127 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 Gene3D G3DSA:2.60.120.260 106 226 6.8E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 Pfam PF08760 Domain of unknown function (DUF1793) 649 813 2.0E-56 T 23-04-2016 IPR014870 Domain of unknown function DUF1793 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 Pfam PF16335 Domain of unknown function (DUF4965) 475 643 1.6E-70 T 23-04-2016 IPR032514 Domain of unknown function DUF4965 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 SUPERFAMILY SSF49785 109 232 1.2E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS15425 e922fc1c8c787e1c7bd6aa86c700f385 821 Pfam PF16334 Domain of unknown function (DUF4964) 27 90 1.1E-26 T 23-04-2016 IPR032515 Domain of unknown function DUF4964 NIAKO_RS20990 c4f6b0094c3a11798707dd0ebc341d58 276 Gene3D G3DSA:3.40.50.720 6 236 1.2E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20990 c4f6b0094c3a11798707dd0ebc341d58 276 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 181 2.0E-25 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS20990 c4f6b0094c3a11798707dd0ebc341d58 276 SUPERFAMILY SSF51735 4 269 5.14E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20990 c4f6b0094c3a11798707dd0ebc341d58 276 PANTHER PTHR10366 7 273 1.7E-47 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Gene3D G3DSA:1.50.10.20 484 560 4.4E-4 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PRINTS PR01950 LanC-like protein superfamily signature 418 436 4.4E-6 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PRINTS PR01950 LanC-like protein superfamily signature 579 599 4.4E-6 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PRINTS PR01950 LanC-like protein superfamily signature 520 536 4.4E-6 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PRINTS PR01950 LanC-like protein superfamily signature 688 705 4.4E-6 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PANTHER PTHR24362:SF229 555 569 1.1E-19 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PANTHER PTHR24362:SF229 80 344 1.1E-19 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 SMART SM00220 35 299 3.4E-8 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Gene3D G3DSA:1.10.510.10 168 316 8.2E-21 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Pfam PF00069 Protein kinase domain 83 295 1.8E-20 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Pfam PF05147 Lanthionine synthetase C-like protein 369 713 3.5E-26 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 SUPERFAMILY SSF56112 33 302 3.74E-34 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Gene3D G3DSA:3.30.200.20 35 49 4.6E-11 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 Gene3D G3DSA:3.30.200.20 81 167 4.6E-11 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 SMART SM01260 365 716 2.3E-33 T 23-04-2016 IPR007822 Lanthionine synthetase C-like NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PANTHER PTHR24362 555 569 1.1E-19 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 PANTHER PTHR24362 80 344 1.1E-19 T 23-04-2016 NIAKO_RS13250 b755586579aee2fadf8a817c87dd5df3 717 SUPERFAMILY SSF158745 362 714 1.31E-43 T 23-04-2016 NIAKO_RS21555 eb749d71d4dce729b80b309a3dd7a3c4 528 Gene3D G3DSA:1.25.40.10 363 457 6.3E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21555 eb749d71d4dce729b80b309a3dd7a3c4 528 Gene3D G3DSA:1.25.40.10 207 314 6.3E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21555 eb749d71d4dce729b80b309a3dd7a3c4 528 Pfam PF14322 Starch-binding associating with outer membrane 24 225 1.4E-16 T 23-04-2016 NIAKO_RS21555 eb749d71d4dce729b80b309a3dd7a3c4 528 SUPERFAMILY SSF48452 20 521 6.57E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21555 eb749d71d4dce729b80b309a3dd7a3c4 528 Pfam PF07980 SusD family 266 521 7.3E-32 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532:SF57 7 358 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532:SF57 464 537 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532:SF57 561 822 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532:SF57 841 1025 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532 7 358 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532 464 537 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532 561 822 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 PANTHER PTHR11532 841 1025 1.9E-216 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.40.170.20 925 1025 7.1E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.40.170.20 229 248 7.1E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.40.170.20 861 886 7.1E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.40.170.20 313 780 7.1E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF56935 432 770 7.78E-87 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF56935 851 896 7.78E-87 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF56935 304 392 7.78E-87 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF56935 934 1025 7.78E-87 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF56935 98 252 7.78E-87 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 9.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 SUPERFAMILY SSF49464 20 100 5.36E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Pfam PF13715 CarboxypepD_reg-like domain 21 102 4.1E-16 T 23-04-2016 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.170.130.10 106 228 6.8E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 19 1026 4.1E-237 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 228 5.4E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28250 26fb5196ab6c95c7f46cc03a3739be73 1027 Gene3D G3DSA:2.60.40.1120 21 105 4.8E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 SMART SM00740 107 177 0.28 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 SMART SM00740 38 105 3.4E-11 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 SMART SM00740 180 234 1.4E-4 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 Pfam PF03793 PASTA domain 185 248 4.7E-7 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 Pfam PF03793 PASTA domain 44 104 5.1E-10 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01590 ccbef14114ffd34f43a4146e2273d071 264 SUPERFAMILY SSF54184 41 104 2.49E-5 T 23-04-2016 NIAKO_RS23405 a151437e557214bdc47798151d89b393 459 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS23405 a151437e557214bdc47798151d89b393 459 Pfam PF13899 Thioredoxin-like 50 141 6.3E-11 T 23-04-2016 NIAKO_RS23405 a151437e557214bdc47798151d89b393 459 Gene3D G3DSA:3.40.30.10 49 167 7.8E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS23405 a151437e557214bdc47798151d89b393 459 SUPERFAMILY SSF52833 47 170 1.93E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 SUPERFAMILY SSF53474 297 447 1.19E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 SUPERFAMILY SSF53474 160 231 1.19E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 Pfam PF08386 TAP-like protein 383 443 8.0E-6 T 23-04-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 Pfam PF00561 alpha/beta hydrolase fold 106 226 9.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 Gene3D G3DSA:3.40.50.1820 162 281 1.2E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 Gene3D G3DSA:3.40.50.1820 41 122 1.2E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19130 30db4adae4fb68aefc2468df09d3f039 475 Gene3D G3DSA:3.40.50.1820 344 446 1.2E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 PANTHER PTHR10314 71 165 7.8E-24 T 23-04-2016 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 PANTHER PTHR10314 21 48 7.8E-24 T 23-04-2016 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 PANTHER PTHR10314:SF4 71 165 7.8E-24 T 23-04-2016 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 PANTHER PTHR10314:SF4 21 48 7.8E-24 T 23-04-2016 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 Pfam PF00290 Tryptophan synthase alpha chain 9 242 6.8E-75 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 Gene3D G3DSA:3.20.20.70 1 254 2.8E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 11 253 28.949 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 6 242 1.5E-62 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 45 58 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01795 67e3aa9af1dc1ff6536343188335637c 256 SUPERFAMILY SSF51366 1 239 7.35E-76 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS05440 31bd819e16c9ccb0d9d322d2d78ff8d9 71 Gene3D G3DSA:3.10.180.10 19 62 3.7E-4 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 16 230 7.5E-60 T 23-04-2016 IPR001405 RadC protein NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 Gene3D G3DSA:3.40.140.10 107 230 5.0E-43 T 23-04-2016 NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 PANTHER PTHR30471 3 230 1.7E-85 T 23-04-2016 NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 179 184 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 Pfam PF04002 RadC-like JAB domain 110 228 1.8E-40 T 23-04-2016 IPR025657 RadC-like JAB domain NIAKO_RS00875 7115fa492dd0df1d40b1f34314893c35 230 PANTHER PTHR30471:SF3 3 230 1.7E-85 T 23-04-2016 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 PIRSF PIRSF001435 10 209 1.0E-34 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 Gene3D G3DSA:1.10.1670.10 120 206 1.5E-22 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 169 1.7E-16 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 PANTHER PTHR10359:SF18 25 206 5.7E-40 T 23-04-2016 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 PANTHER PTHR10359 25 206 5.7E-40 T 23-04-2016 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 SUPERFAMILY SSF48150 7 206 3.77E-43 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 Gene3D G3DSA:1.10.340.30 26 119 4.3E-20 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS02590 62fa913daf8b34ee53093d6342e439bc 220 SMART SM00478 40 185 2.3E-31 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 SUPERFAMILY SSF53187 32 87 1.83E-56 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 SUPERFAMILY SSF53187 282 498 1.83E-56 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 Gene3D G3DSA:3.40.630.10 35 88 4.2E-62 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 Gene3D G3DSA:3.40.630.10 289 499 4.2E-62 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 PANTHER PTHR12053 239 505 1.6E-41 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 PANTHER PTHR12053:SF3 239 505 1.6E-41 T 23-04-2016 NIAKO_RS12105 c2234d46d50bbc7fce0054abf8b7f482 510 Pfam PF04389 Peptidase family M28 290 492 8.5E-38 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS27950 29e8e5b95b2c7f33d8163499bab5c77a 290 SUPERFAMILY SSF53300 74 209 3.97E-16 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27950 29e8e5b95b2c7f33d8163499bab5c77a 290 PANTHER PTHR33608:SF5 2 290 1.6E-86 T 23-04-2016 NIAKO_RS27950 29e8e5b95b2c7f33d8163499bab5c77a 290 Pfam PF01882 Protein of unknown function DUF58 40 123 9.1E-22 T 23-04-2016 IPR002881 Domain of unknown function DUF58 NIAKO_RS27950 29e8e5b95b2c7f33d8163499bab5c77a 290 Gene3D G3DSA:3.40.50.410 76 208 6.5E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27950 29e8e5b95b2c7f33d8163499bab5c77a 290 PANTHER PTHR33608 2 290 1.6E-86 T 23-04-2016 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 SMART SM00534 416 588 2.7E-12 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 PANTHER PTHR11361 331 592 5.4E-50 T 23-04-2016 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 SUPERFAMILY SSF52540 388 590 2.15E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 Gene3D G3DSA:1.10.1420.10 124 178 1.4E-7 T 23-04-2016 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 Pfam PF00488 MutS domain V 420 580 1.4E-28 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 SUPERFAMILY SSF48334 126 375 1.16E-8 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS10330 fbff6949b7ee77d7e67c0677dc33d192 593 Gene3D G3DSA:3.40.50.300 385 591 5.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 PANTHER PTHR11019 228 310 6.2E-23 T 23-04-2016 NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 SMART SM00342 219 302 1.8E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 Gene3D G3DSA:1.10.10.60 258 306 1.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 Pfam PF12833 Helix-turn-helix domain 226 303 1.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 PANTHER PTHR11019:SF80 228 310 6.2E-23 T 23-04-2016 NIAKO_RS29285 3b487490ae305140940bc6549fed049b 312 SUPERFAMILY SSF46689 258 306 8.51E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 152 166 9.1E-12 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 90 106 9.1E-12 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 36 49 9.1E-12 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 39 162 4.4E-25 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 PANTHER PTHR22604 1 366 3.9E-127 T 23-04-2016 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 SUPERFAMILY SSF55347 166 296 7.03E-23 T 23-04-2016 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 PANTHER PTHR22604:SF125 1 366 3.9E-127 T 23-04-2016 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 Gene3D G3DSA:3.30.360.10 180 366 9.5E-37 T 23-04-2016 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 Gene3D G3DSA:3.40.50.720 33 179 1.4E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 177 236 3.5E-4 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS20510 115316bcce210f2b36115391d88f112d 366 SUPERFAMILY SSF51735 31 191 2.54E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 Pfam PF01189 16S rRNA methyltransferase RsmB/F 113 302 1.7E-38 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 231 247 1.5E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 115 125 1.5E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 287 304 1.5E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 181 193 1.5E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 82 96 1.5E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 96 3.3E-16 T 23-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 Gene3D G3DSA:3.40.50.150 93 304 7.9E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 411 459 2.4E-16 T 23-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 SUPERFAMILY SSF53335 7 304 1.17E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PANTHER PTHR22807 397 443 2.1E-93 T 23-04-2016 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PANTHER PTHR22807 14 316 2.1E-93 T 23-04-2016 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PANTHER PTHR22807:SF36 397 443 2.1E-93 T 23-04-2016 NIAKO_RS22490 898112a4bb0e0910b7f33fe5b7084552 472 PANTHER PTHR22807:SF36 14 316 2.1E-93 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.40.170.20 811 812 6.3E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.40.170.20 227 247 6.3E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.40.170.20 301 779 6.3E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.40.170.20 859 1008 6.3E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532:SF57 565 787 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532:SF57 806 1006 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532:SF57 454 530 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532:SF57 16 352 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 33 1008 1.1E-216 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.60.40.1120 35 116 1.5E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532 565 787 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532 806 1006 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532 454 530 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 PANTHER PTHR11532 16 352 6.2E-205 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Pfam PF13715 CarboxypepD_reg-like domain 35 114 2.9E-10 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 203 233 5.5E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 227 1.5E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 SUPERFAMILY SSF56935 410 779 7.78E-94 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 SUPERFAMILY SSF56935 851 1008 7.78E-94 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 SUPERFAMILY SSF56935 292 381 7.78E-94 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 SUPERFAMILY SSF56935 112 251 7.78E-94 T 23-04-2016 NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 SUPERFAMILY SSF49464 33 109 1.24E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35865 7f43d58368b18c125af2cd34bff8c2cf 1008 Gene3D G3DSA:2.170.130.10 117 226 1.3E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 PANTHER PTHR30069 89 367 1.3E-32 T 23-04-2016 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Pfam PF00593 TonB dependent receptor 762 1062 2.2E-14 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Gene3D G3DSA:2.60.40.1120 129 204 1.5E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Gene3D G3DSA:2.170.130.10 231 336 6.1E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Gene3D G3DSA:2.40.170.20 424 1062 3.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 SUPERFAMILY SSF56935 415 1062 9.16E-59 T 23-04-2016 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 SUPERFAMILY SSF56935 212 354 9.16E-59 T 23-04-2016 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Pfam PF07715 TonB-dependent Receptor Plug Domain 234 317 8.6E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 SUPERFAMILY SSF49452 121 203 8.24E-10 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Pfam PF13715 CarboxypepD_reg-like domain 129 214 6.9E-12 T 23-04-2016 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 Pfam PF07660 Secretin and TonB N terminus short domain 67 114 4.7E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS24365 7203c9e21129ddb4c617fec144946358 1064 PANTHER PTHR30069:SF11 89 367 1.3E-32 T 23-04-2016 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 Pfam PF12833 Helix-turn-helix domain 187 261 5.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 SMART SM00342 177 260 4.2E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 Gene3D G3DSA:1.10.10.60 166 213 5.2E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 Gene3D G3DSA:1.10.10.60 214 262 1.3E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 Gene3D G3DSA:2.60.120.280 20 95 5.7E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 SUPERFAMILY SSF46689 214 262 5.82E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 SUPERFAMILY SSF51215 20 90 7.32E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 PANTHER PTHR11019 128 257 1.4E-16 T 23-04-2016 NIAKO_RS03905 b932e8c892ad996022aceaa248f1d29f 264 PANTHER PTHR11019 15 106 1.4E-16 T 23-04-2016 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Pfam PF08448 PAS fold 18 126 3.0E-6 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Pfam PF00512 His Kinase A (phospho-acceptor) domain 424 487 1.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 1.3E-16 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Gene3D G3DSA:3.30.450.20 278 389 4.5E-29 T 23-04-2016 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Gene3D G3DSA:3.30.565.10 494 655 1.2E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Gene3D G3DSA:1.10.287.130 416 486 2.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Pfam PF13185 GAF domain 200 265 1.2E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SUPERFAMILY SSF55785 265 389 2.09E-25 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 2.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 2.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 2.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SUPERFAMILY SSF47384 408 488 1.69E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 537 655 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Gene3D G3DSA:3.30.450.20 15 122 1.4E-9 T 23-04-2016 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00065 153 274 0.0099 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00086 350 392 4.1E-8 T 23-04-2016 IPR001610 PAC motif NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00086 83 124 44.0 T 23-04-2016 IPR001610 PAC motif NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 PANTHER PTHR24423 276 655 7.1E-86 T 23-04-2016 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 PANTHER PTHR24423 15 139 7.1E-86 T 23-04-2016 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SUPERFAMILY SSF55781 136 290 5.45E-18 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Pfam PF08447 PAS fold 303 385 1.9E-15 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00388 423 491 1.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 Gene3D G3DSA:3.30.450.40 215 277 8.1E-12 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SUPERFAMILY SSF55785 18 126 1.55E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00091 278 344 5.2E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00091 11 78 52.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SUPERFAMILY SSF55874 488 655 7.07E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15705 72a05b24e9e054a8edd577b51d5e4dd7 656 SMART SM00387 533 656 9.6E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 5 692 0.0 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Pfam PF00122 E1-E2 ATPase 74 302 7.6E-41 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Gene3D G3DSA:3.40.1110.10 324 464 5.4E-39 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF81665 24 107 6.28E-10 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF81665 214 305 6.28E-10 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PANTHER PTHR24093 11 603 0.0 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PANTHER PTHR24093 641 696 0.0 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 10 696 39.518 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 ProSitePatterns PS01229 Hypothetical cof family signature 2. 532 554 - T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 77 338 1.7E-31 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 386 616 9.3E-42 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Gene3D G3DSA:2.70.150.10 46 214 1.5E-22 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF81653 123 213 2.22E-19 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Gene3D G3DSA:3.40.50.1000 296 323 1.3E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Gene3D G3DSA:3.40.50.1000 465 580 1.3E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 546 6.2E-31 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF56784 390 420 2.16E-40 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF56784 299 323 2.16E-40 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 SUPERFAMILY SSF56784 451 575 2.16E-40 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 5.4E-24 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 5.4E-24 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 5.4E-24 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 5.4E-24 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 551 5.4E-24 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PANTHER PTHR24093:SF49 11 603 0.0 T 23-04-2016 NIAKO_RS20290 7d186161e23cde009526d1b550c45144 696 PANTHER PTHR24093:SF49 641 696 0.0 T 23-04-2016 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 Gene3D G3DSA:3.30.565.10 264 434 3.1E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 SUPERFAMILY SSF47384 201 277 1.22E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 275 2.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 SUPERFAMILY SSF55874 267 433 6.55E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 Gene3D G3DSA:1.10.287.130 207 263 2.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 SMART SM00388 209 277 5.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 3.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 3.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 3.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 3.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PANTHER PTHR24423 6 13 5.6E-62 T 23-04-2016 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 PANTHER PTHR24423 207 432 5.6E-62 T 23-04-2016 NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 433 2.4E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS04905 10c3a8ee647669734a75c9bdf0a4aaa8 437 SMART SM00387 324 435 1.7E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 Gene3D G3DSA:1.10.510.10 135 224 2.5E-16 T 23-04-2016 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 SUPERFAMILY SSF56112 14 227 1.48E-23 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 PANTHER PTHR24362:SF160 51 193 9.3E-13 T 23-04-2016 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 PANTHER PTHR24362:SF160 425 436 9.3E-13 T 23-04-2016 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 143 155 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 Gene3D G3DSA:3.30.200.20 17 134 2.3E-5 T 23-04-2016 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 Pfam PF00069 Protein kinase domain 27 224 6.4E-17 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 SMART SM00220 18 296 4.9E-6 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 PANTHER PTHR24362 51 193 9.3E-13 T 23-04-2016 NIAKO_RS08705 9a6d12e2f29c496f38a3e39118962292 464 PANTHER PTHR24362 425 436 9.3E-13 T 23-04-2016 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 Pfam PF14322 Starch-binding associating with outer membrane 45 222 2.4E-16 T 23-04-2016 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 SUPERFAMILY SSF48452 20 352 1.39E-103 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 SUPERFAMILY SSF48452 385 563 1.39E-103 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 Pfam PF07980 SusD family 261 563 1.9E-50 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 Gene3D G3DSA:1.25.40.10 317 331 5.0E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 Gene3D G3DSA:1.25.40.10 412 504 5.0E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26045 1459bc126fc9e7e946696df1aff36a79 564 Gene3D G3DSA:1.25.40.10 201 277 5.0E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SUPERFAMILY SSF52172 2 160 3.7E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 Pfam PF00072 Response regulator receiver domain 2 114 4.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 351 6.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 6.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 407 6.9E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PANTHER PTHR24423 119 408 2.2E-60 T 23-04-2016 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PANTHER PTHR24423 33 46 2.2E-60 T 23-04-2016 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SUPERFAMILY SSF55874 251 408 3.41E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 Gene3D G3DSA:3.30.565.10 250 411 2.5E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PANTHER PTHR24423:SF518 119 408 2.2E-60 T 23-04-2016 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 PANTHER PTHR24423:SF518 33 46 2.2E-60 T 23-04-2016 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SMART SM00388 179 246 4.2E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 Gene3D G3DSA:3.40.50.2300 2 135 3.3E-35 T 23-04-2016 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SMART SM00387 286 410 1.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SMART SM00448 1 114 3.6E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 Gene3D G3DSA:1.10.287.130 173 242 1.6E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 SUPERFAMILY SSF47384 166 246 1.53E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13495 48d82d7021cbb8d10089b024e102563e 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 409 4.0E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Pfam PF13715 CarboxypepD_reg-like domain 36 104 1.2E-9 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Gene3D G3DSA:2.170.130.10 150 285 2.0E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Pfam PF07715 TonB-dependent Receptor Plug Domain 149 277 1.5E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Gene3D G3DSA:2.40.170.20 366 692 1.5E-8 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Gene3D G3DSA:2.40.170.20 729 826 1.5E-8 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 876 937 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 726 827 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 367 445 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 474 691 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 985 1050 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF56935 143 305 1.37E-43 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 Gene3D G3DSA:2.60.40.1120 36 105 5.2E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 SUPERFAMILY SSF49464 34 95 7.06E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 209 1065 1.7E-178 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532 137 186 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532 213 477 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532 16 113 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532 575 1063 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532:SF57 137 186 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532:SF57 213 477 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532:SF57 16 113 2.7E-196 T 23-04-2016 NIAKO_RS06655 bc8f73968de68127e4ef97b6f57608ac 1065 PANTHER PTHR11532:SF57 575 1063 2.7E-196 T 23-04-2016 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 SUPERFAMILY SSF53335 208 304 8.17E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 SUPERFAMILY SSF53335 6 110 8.17E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 SUPERFAMILY SSF81799 111 208 8.63E-25 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 304 34.886 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 PANTHER PTHR11265:SF0 5 306 9.1E-115 T 23-04-2016 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 PIRSF PIRSF004486 1 305 6.4E-100 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 Gene3D G3DSA:3.40.50.150 211 306 2.2E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 Gene3D G3DSA:3.40.50.150 7 107 2.2E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 PANTHER PTHR11265 5 306 9.1E-115 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 Gene3D G3DSA:1.10.150.170 110 210 2.8E-27 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 Pfam PF01795 MraW methylase family 6 304 1.6E-94 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS35990 393f892cf956b899e60434afe8e76589 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 303 6.5E-96 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS32360 903c9dea92c40934f96d128d65ba026f 324 Gene3D G3DSA:3.40.910.10 6 322 5.3E-72 T 23-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 NIAKO_RS32360 903c9dea92c40934f96d128d65ba026f 324 SUPERFAMILY SSF52467 6 323 2.55E-80 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS32360 903c9dea92c40934f96d128d65ba026f 324 Pfam PF01916 Deoxyhypusine synthase 16 320 6.7E-36 T 23-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 NIAKO_RS32360 903c9dea92c40934f96d128d65ba026f 324 PANTHER PTHR11703 33 319 1.2E-41 T 23-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Pfam PF02887 Pyruvate kinase, alpha/beta domain 369 481 4.9E-23 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 SUPERFAMILY SSF52935 334 484 7.98E-29 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 253 277 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 69 85 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 226 252 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 278 302 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 196 210 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 303 321 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PRINTS PR01050 Pyruvate kinase family signature 322 338 7.7E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 12 484 1.2E-160 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Gene3D G3DSA:3.40.1380.20 336 484 6.3E-37 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 SUPERFAMILY SSF51621 8 84 5.23E-91 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 SUPERFAMILY SSF51621 166 347 5.23E-91 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 SUPERFAMILY SSF50800 80 177 1.03E-25 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Gene3D G3DSA:2.40.33.10 83 178 1.5E-27 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Pfam PF00224 Pyruvate kinase, barrel domain 12 347 5.2E-119 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Gene3D G3DSA:3.20.20.60 13 82 8.1E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 Gene3D G3DSA:3.20.20.60 179 335 8.1E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS04820 5eae8f264cf2eaad17607a04859e669d 485 PANTHER PTHR11817 10 463 1.0E-182 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 Gene3D G3DSA:3.40.605.10 60 307 9.7E-71 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 PANTHER PTHR11699:SF144 26 539 2.2E-274 T 23-04-2016 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 PANTHER PTHR11699 26 539 2.2E-274 T 23-04-2016 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 Pfam PF00171 Aldehyde dehydrogenase family 60 522 1.5E-130 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 SUPERFAMILY SSF53720 59 528 3.4E-128 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 293 300 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS07450 a60498b2deb36875b8fc607cdfe30dc7 541 Gene3D G3DSA:3.40.309.10 308 488 1.5E-49 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 145 165 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 432 6.6E-143 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Gene3D G3DSA:2.40.50.140 374 435 1.9E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 SUPERFAMILY SSF102114 133 367 1.44E-56 T 23-04-2016 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Pfam PF04055 Radical SAM superfamily 147 315 4.7E-24 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Pfam PF00919 Uncharacterized protein family UPF0004 10 111 8.7E-26 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 434 61.552 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 SMART SM00729 141 359 5.2E-49 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 PANTHER PTHR11918 10 435 1.5E-168 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 PANTHER PTHR11918:SF57 10 435 1.5E-168 T 23-04-2016 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Pfam PF01938 TRAM domain 371 435 3.6E-8 T 23-04-2016 IPR002792 TRAM domain NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 432 1.5E-120 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NIAKO_RS12700 0ee1684ca77ac86e84257c7b9599a1a4 435 Gene3D G3DSA:3.80.30.20 139 372 2.9E-77 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 Gene3D G3DSA:3.40.50.720 2 248 1.2E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PANTHER PTHR24322:SF242 151 187 3.3E-44 T 23-04-2016 NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PANTHER PTHR24322:SF242 10 135 3.3E-44 T 23-04-2016 NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PANTHER PTHR24322 151 187 3.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 PANTHER PTHR24322 10 135 3.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 SUPERFAMILY SSF51735 5 247 1.64E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18515 346c95add6d25dd0e198a5e006bb9001 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 1.2E-57 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 42 1035 3.2E-265 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 235 1.8E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.60.40.1120 42 128 1.1E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF49464 41 118 1.07E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.170.130.10 129 238 3.0E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 212 241 1.9E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.40.170.20 441 824 1.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.40.170.20 878 1035 1.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.40.170.20 325 396 1.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Gene3D G3DSA:2.40.170.20 239 271 1.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 Pfam PF13715 CarboxypepD_reg-like domain 42 120 1.2E-13 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 PANTHER PTHR11532 23 434 1.5E-271 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 PANTHER PTHR11532 527 1033 1.5E-271 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF56935 951 1035 5.49E-83 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF56935 439 805 5.49E-83 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF56935 117 259 5.49E-83 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF56935 872 914 5.49E-83 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 SUPERFAMILY SSF56935 320 410 5.49E-83 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 PANTHER PTHR11532:SF57 23 434 1.5E-271 T 23-04-2016 NIAKO_RS13795 3f12825a45a2a41fcf1518d1d75a376f 1035 PANTHER PTHR11532:SF57 527 1033 1.5E-271 T 23-04-2016 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 SMART SM00448 5 113 3.4E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 SUPERFAMILY SSF52172 3 125 1.85E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 Pfam PF04397 LytTr DNA-binding domain 147 218 2.0E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 Gene3D G3DSA:2.40.50.40 139 206 2.2E-23 T 23-04-2016 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 Gene3D G3DSA:3.40.50.2300 2 125 3.1E-25 T 23-04-2016 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 Pfam PF00072 Response regulator receiver domain 8 113 1.9E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 PANTHER PTHR26402 5 131 6.7E-26 T 23-04-2016 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 PANTHER PTHR26402 207 230 6.7E-26 T 23-04-2016 NIAKO_RS15195 f2c83a12aff5618bff6e9045275c22f2 239 SMART SM00850 146 237 5.7E-24 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS33310 1304530394801ff4b58e44ef20ae9b8a 416 Pfam PF13692 Glycosyl transferases group 1 232 364 5.1E-18 T 23-04-2016 NIAKO_RS33310 1304530394801ff4b58e44ef20ae9b8a 416 Gene3D G3DSA:3.40.50.2000 203 376 4.1E-16 T 23-04-2016 NIAKO_RS33310 1304530394801ff4b58e44ef20ae9b8a 416 SUPERFAMILY SSF53756 63 396 8.9E-47 T 23-04-2016 NIAKO_RS33310 1304530394801ff4b58e44ef20ae9b8a 416 PANTHER PTHR12526 111 132 4.1E-39 T 23-04-2016 NIAKO_RS33310 1304530394801ff4b58e44ef20ae9b8a 416 PANTHER PTHR12526 167 397 4.1E-39 T 23-04-2016 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 SUPERFAMILY SSF90123 17 347 3.66E-74 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 Pfam PF00664 ABC transporter transmembrane region 30 318 1.2E-43 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 PANTHER PTHR24221 14 600 2.8E-202 T 23-04-2016 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 SMART SM00382 389 575 1.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 Gene3D G3DSA:3.40.50.300 363 594 3.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 Gene3D G3DSA:1.20.1560.10 17 346 4.4E-72 T 23-04-2016 NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 SUPERFAMILY SSF52540 356 600 8.54E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33980 e9ebd9a1dabd9e87db9a8715ec4a6247 606 Pfam PF00005 ABC transporter 380 529 1.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 229 259 2.2E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532:SF57 56 399 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532:SF57 577 1087 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532:SF57 420 466 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532 56 399 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532 577 1087 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 PANTHER PTHR11532 420 466 0.0 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 1006 1066 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 336 433 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 472 536 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 911 953 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 137 277 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF56935 567 839 6.41E-57 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 Pfam PF13715 CarboxypepD_reg-like domain 58 139 9.5E-16 T 23-04-2016 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 Gene3D G3DSA:2.170.130.10 148 263 6.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 57 1089 4.1E-279 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 Gene3D G3DSA:2.60.40.1120 58 147 6.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 SUPERFAMILY SSF49464 56 137 9.42E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS26530 cb3488b9253f836985ff40950c0df958 1089 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 253 4.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 SUPERFAMILY SSF51735 1 160 3.03E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 PANTHER PTHR11133:SF14 1 291 1.6E-92 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 PANTHER PTHR11133:SF14 346 503 1.6E-92 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 SUPERFAMILY SSF55347 127 314 5.3E-41 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 PANTHER PTHR11133 1 291 1.6E-92 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 PANTHER PTHR11133 346 503 1.6E-92 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 Gene3D G3DSA:3.30.360.10 407 452 4.6E-47 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 Gene3D G3DSA:3.30.360.10 137 251 4.6E-47 T 23-04-2016 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 115 4.9E-7 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 Gene3D G3DSA:3.40.50.720 65 136 1.1E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10135 e870ebdc87777fac4927d6c89d4d0f66 504 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 126 494 4.4E-82 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal NIAKO_RS17700 58666ccecbecd1c44dca647671bed27e 525 PANTHER PTHR11819 4 448 7.2E-92 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17700 58666ccecbecd1c44dca647671bed27e 525 Pfam PF00474 Sodium:solute symporter family 35 434 1.5E-36 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17700 58666ccecbecd1c44dca647671bed27e 525 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 435 1.5E-61 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17700 58666ccecbecd1c44dca647671bed27e 525 PANTHER PTHR11819:SF163 4 448 7.2E-92 T 23-04-2016 NIAKO_RS31210 caab45dfe8d9bf995c43ad4d2a05ff60 336 Pfam PF02445 Quinolinate synthetase A protein 32 329 5.4E-122 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NIAKO_RS31210 caab45dfe8d9bf995c43ad4d2a05ff60 336 PANTHER PTHR30573 21 332 4.4E-155 T 23-04-2016 NIAKO_RS31210 caab45dfe8d9bf995c43ad4d2a05ff60 336 SUPERFAMILY SSF142754 28 330 7.85E-120 T 23-04-2016 NIAKO_RS31210 caab45dfe8d9bf995c43ad4d2a05ff60 336 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 331 4.5E-123 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NIAKO_RS31210 caab45dfe8d9bf995c43ad4d2a05ff60 336 Hamap MF_00568 Quinolinate synthase A [nadA]. 27 330 46.046 T 23-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NIAKO_RS26075 58f66f0db715210b653ff36990cd54a6 304 PANTHER PTHR23024:SF41 58 300 2.4E-61 T 23-04-2016 NIAKO_RS26075 58f66f0db715210b653ff36990cd54a6 304 Gene3D G3DSA:3.40.50.1820 52 298 1.3E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26075 58f66f0db715210b653ff36990cd54a6 304 PANTHER PTHR23024 58 300 2.4E-61 T 23-04-2016 NIAKO_RS26075 58f66f0db715210b653ff36990cd54a6 304 Pfam PF00326 Prolyl oligopeptidase family 143 299 5.1E-11 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS26075 58f66f0db715210b653ff36990cd54a6 304 SUPERFAMILY SSF53474 61 300 2.61E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 PANTHER PTHR11019:SF58 63 319 9.9E-42 T 23-04-2016 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 SUPERFAMILY SSF46689 219 267 7.35E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 Gene3D G3DSA:3.40.50.880 40 221 1.1E-29 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 PANTHER PTHR11019 63 319 9.9E-42 T 23-04-2016 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 SUPERFAMILY SSF52317 1 196 2.63E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 Pfam PF01965 DJ-1/PfpI family 40 178 2.1E-10 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 SUPERFAMILY SSF46689 270 319 4.93E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 Gene3D G3DSA:1.10.10.60 222 269 2.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 Pfam PF12833 Helix-turn-helix domain 239 317 8.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 Gene3D G3DSA:1.10.10.60 270 319 1.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06380 ff9a73c1246aa4a1838d2e09c585d333 322 SMART SM00342 233 316 3.2E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 SUPERFAMILY SSF51445 282 584 1.75E-65 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Pfam PF00703 Glycosyl hydrolases family 2 192 280 9.0E-5 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Gene3D G3DSA:3.20.20.80 279 584 1.3E-63 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 PANTHER PTHR10066 25 545 3.6E-91 T 23-04-2016 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 SUPERFAMILY SSF49785 11 185 1.12E-42 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 28 185 3.0E-17 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 SUPERFAMILY SSF49303 190 280 3.17E-11 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 PRINTS PR00132 Glycosyl hydrolase family 2 signature 114 129 1.1E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 PRINTS PR00132 Glycosyl hydrolase family 2 signature 389 404 1.1E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 PRINTS PR00132 Glycosyl hydrolase family 2 signature 291 305 1.1E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 PRINTS PR00132 Glycosyl hydrolase family 2 signature 323 341 1.1E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Gene3D G3DSA:2.60.120.260 23 178 3.5E-40 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Gene3D G3DSA:2.60.40.320 179 278 7.6E-11 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS11895 89c64d94997c0142de783f168c8db1cd 590 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 282 520 2.1E-28 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 PANTHER PTHR11624:SF2 12 318 3.2E-108 T 23-04-2016 NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 Gene3D G3DSA:3.40.50.920 187 314 1.3E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 SUPERFAMILY SSF52922 181 314 1.11E-35 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 Gene3D G3DSA:3.40.50.970 7 186 7.3E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 Pfam PF02779 Transketolase, pyrimidine binding domain 10 171 1.0E-34 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 SMART SM00861 10 175 3.3E-51 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 Pfam PF02780 Transketolase, C-terminal domain 186 306 8.8E-32 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 PANTHER PTHR11624 12 318 3.2E-108 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS33895 596425a5d643396d179d73aa337d1924 318 SUPERFAMILY SSF52518 5 176 1.28E-54 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 5.0E-34 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 Gene3D G3DSA:3.40.47.10 2 257 8.0E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 PANTHER PTHR11712 1 412 2.8E-176 T 23-04-2016 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 SMART SM00825 Beta-ketoacyl synthase 4 404 3.8E-14 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 411 8.0E-170 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 Gene3D G3DSA:3.40.47.10 262 412 1.7E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 PIRSF PIRSF000447 1 413 4.1E-162 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 3.3E-53 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 SUPERFAMILY SSF53901 1 251 5.19E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07660 f564cc1394c74940d6fdffdb11608ceb 413 SUPERFAMILY SSF53901 214 412 1.46E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS21425 1365cb9e05c3d25c42e2e7bfd8eaaf7e 199 Gene3D G3DSA:2.60.120.10 5 155 1.3E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS21425 1365cb9e05c3d25c42e2e7bfd8eaaf7e 199 PANTHER PTHR24567:SF33 11 184 5.3E-17 T 23-04-2016 NIAKO_RS21425 1365cb9e05c3d25c42e2e7bfd8eaaf7e 199 PANTHER PTHR24567 11 184 5.3E-17 T 23-04-2016 NIAKO_RS21425 1365cb9e05c3d25c42e2e7bfd8eaaf7e 199 SUPERFAMILY SSF51206 18 136 1.17E-16 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 Gene3D G3DSA:3.40.630.10 35 270 2.4E-27 T 23-04-2016 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 PANTHER PTHR11705 96 168 6.1E-12 T 23-04-2016 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 PANTHER PTHR11705 43 76 6.1E-12 T 23-04-2016 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 SUPERFAMILY SSF53187 108 321 3.64E-55 T 23-04-2016 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 SUPERFAMILY SSF53187 31 80 3.64E-55 T 23-04-2016 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 Pfam PF00246 Zinc carboxypeptidase 43 214 8.5E-24 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 SMART SM00631 37 354 0.0015 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 SUPERFAMILY SSF52317 603 707 6.28E-17 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS02000 c229c64956d5be7a7880539c0071535e 846 SUPERFAMILY SSF52317 735 844 6.28E-17 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 140 156 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 31 174 2.1E-72 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 21 173 42.77 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 Gene3D G3DSA:3.40.50.700 41 174 5.6E-36 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 57 167 6.2E-26 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 PANTHER PTHR11995 30 182 2.3E-90 T 23-04-2016 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 PANTHER PTHR11995:SF14 30 182 2.3E-90 T 23-04-2016 NIAKO_RS35490 f80e2173f8dbf9e13719788b434b7217 188 SUPERFAMILY SSF56770 29 179 1.44E-66 T 23-04-2016 NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 SMART SM00271 4 62 1.6E-33 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 Pfam PF01556 DnaJ C terminal domain 144 286 1.0E-35 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 Gene3D G3DSA:1.10.287.110 1 126 9.5E-37 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 Gene3D G3DSA:2.60.260.20 127 207 1.3E-12 T 23-04-2016 NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 SUPERFAMILY SSF46565 1 73 1.96E-31 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 SUPERFAMILY SSF46565 106 126 1.96E-31 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 SUPERFAMILY SSF49493 211 297 1.83E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 Pfam PF00226 DnaJ domain 5 67 6.6E-30 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 Gene3D G3DSA:2.60.260.20 210 287 1.5E-20 T 23-04-2016 NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 SUPERFAMILY SSF49493 137 213 1.31E-13 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 PRINTS PR00625 DnaJ domain signature 25 40 3.1E-26 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 PRINTS PR00625 DnaJ domain signature 7 25 3.1E-26 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 PRINTS PR00625 DnaJ domain signature 62 81 3.1E-26 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 PRINTS PR00625 DnaJ domain signature 42 62 3.1E-26 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS06965 4a11ca5137159c3509b242c64a3d7cbc 306 PANTHER PTHR24078 4 300 1.3E-80 T 23-04-2016 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 92 111 1.3E-9 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 259 277 1.3E-9 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PRINTS PR00133 Glycosyl hydrolase family 3 signature 188 204 1.3E-9 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PANTHER PTHR30620:SF8 1 441 1.8E-278 T 23-04-2016 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PANTHER PTHR30620:SF8 580 870 1.8E-278 T 23-04-2016 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Gene3D G3DSA:3.40.50.1700 600 754 5.6E-70 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Gene3D G3DSA:3.40.50.1700 364 446 5.6E-70 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Pfam PF07691 PA14 domain 466 589 1.4E-14 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SMART SM00758 465 610 1.8E-11 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Pfam PF14310 Fibronectin type III-like domain 787 855 1.6E-13 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PANTHER PTHR30620 1 441 1.8E-278 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 PANTHER PTHR30620 580 870 1.8E-278 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SUPERFAMILY SSF51445 28 377 1.68E-92 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SMART SM01217 787 856 1.1E-17 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Gene3D G3DSA:3.20.20.300 28 349 1.3E-104 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 378 751 1.5E-59 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SUPERFAMILY SSF52279 378 446 3.14E-53 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SUPERFAMILY SSF52279 600 754 3.14E-53 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 SUPERFAMILY SSF56988 467 651 9.81E-25 T 23-04-2016 NIAKO_RS33545 35bf8b9cf2bf90d3d3ef5dfbe09de61a 875 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 336 7.8E-44 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532 599 645 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532 666 1106 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532 62 527 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Pfam PF07715 TonB-dependent Receptor Plug Domain 225 335 3.7E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 311 341 4.2E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF56935 423 492 8.24E-91 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF56935 215 363 8.24E-91 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF56935 1019 1106 8.24E-91 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF56935 520 880 8.24E-91 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF56935 939 987 8.24E-91 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 135 1107 9.7E-247 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Pfam PF13715 CarboxypepD_reg-like domain 136 217 1.1E-15 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SMART SM00965 69 121 0.0043 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Pfam PF07660 Secretin and TonB N terminus short domain 70 119 1.7E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532:SF57 599 645 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532:SF57 666 1106 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 PANTHER PTHR11532:SF57 62 527 4.1E-229 T 23-04-2016 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.40.170.20 339 355 4.3E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.40.170.20 1011 1106 4.3E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.40.170.20 423 896 4.3E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.40.170.20 952 977 4.3E-52 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.60.40.1120 136 225 3.0E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 SUPERFAMILY SSF49464 134 215 1.44E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS21590 3c4fd8a177797358c9cffe751eccd6df 1109 Gene3D G3DSA:2.170.130.10 226 338 8.5E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 SUPERFAMILY SSF49785 471 598 3.97E-29 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PANTHER PTHR23421 5 612 2.8E-230 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 Gene3D G3DSA:3.20.20.80 23 361 1.5E-103 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PANTHER PTHR23421:SF13 5 612 2.8E-230 T 23-04-2016 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 Gene3D G3DSA:2.60.120.260 474 594 6.5E-27 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 170 182 - T 23-04-2016 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 SUPERFAMILY SSF51445 22 361 2.48E-86 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 262 277 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 36 53 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 553 569 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 326 342 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 168 183 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 57 75 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PRINTS PR00742 Glycosyl hydrolase family 35 signature 113 132 5.8E-39 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 PIRSF PIRSF006336 12 612 2.6E-175 T 23-04-2016 IPR026283 Beta-galactosidase 1-like GO:0004565 NIAKO_RS35795 b1c548e858c1bfa34c1418b2346f3c95 617 Pfam PF01301 Glycosyl hydrolases family 35 32 357 4.5E-96 T 23-04-2016 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 Pfam PF00216 Bacterial DNA-binding protein 1 88 9.5E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 Gene3D G3DSA:4.10.520.10 1 88 2.8E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 PANTHER PTHR33175 1 85 3.3E-39 T 23-04-2016 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 SMART SM00411 1 88 2.6E-36 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NIAKO_RS29665 e2f8575b5972dcbf3cc72197a4136078 89 SUPERFAMILY SSF47729 1 88 9.13E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Pfam PF01588 Putative tRNA binding domain 603 694 5.3E-27 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 SUPERFAMILY SSF57770 142 176 1.28E-10 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 560 38.778 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PANTHER PTHR11946 1 653 0.0 T 23-04-2016 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Gene3D G3DSA:2.20.28.20 145 176 4.1E-16 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 265 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 9.8E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 550 9.2E-164 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 PANTHER PTHR11946:SF72 1 653 0.0 T 23-04-2016 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 SUPERFAMILY SSF52374 176 381 2.28E-93 T 23-04-2016 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 SUPERFAMILY SSF52374 5 141 2.28E-93 T 23-04-2016 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 SUPERFAMILY SSF47323 388 610 4.49E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 573 697 2.6E-41 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 SUPERFAMILY SSF50249 596 697 2.18E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Pfam PF09334 tRNA synthetases class I (M) 7 395 3.6E-151 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Pfam PF08264 Anticodon-binding domain of tRNA 419 523 4.1E-8 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Gene3D G3DSA:2.40.50.140 590 697 2.3E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Gene3D G3DSA:3.40.50.620 5 144 1.9E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Gene3D G3DSA:3.40.50.620 183 377 1.9E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS36085 af977c7be53a7fced68c6390919b4ea2 698 Gene3D G3DSA:1.10.730.10 378 549 2.5E-39 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 SUPERFAMILY SSF53474 911 999 1.94E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 SUPERFAMILY SSF53474 665 811 1.94E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 Gene3D G3DSA:3.40.30.10 476 645 4.1E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 SUPERFAMILY SSF52833 485 646 6.43E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 Pfam PF00578 AhpC/TSA family 489 618 1.2E-15 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 Gene3D G3DSA:3.40.50.1820 888 1000 1.7E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 Gene3D G3DSA:3.40.50.1820 666 837 1.7E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 PANTHER PTHR10681:SF68 473 639 4.6E-19 T 23-04-2016 NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 Pfam PF12146 Serine aminopeptidase, S33 718 808 4.7E-9 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS36695 114f0e061ab19ac033c4193534eeca80 1002 PANTHER PTHR10681 473 639 4.6E-19 T 23-04-2016 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 PANTHER PTHR13847:SF196 24 454 5.4E-55 T 23-04-2016 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 SUPERFAMILY SSF51905 22 249 8.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 SUPERFAMILY SSF51905 334 386 8.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 PANTHER PTHR13847 24 454 5.4E-55 T 23-04-2016 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Pfam PF00355 Rieske [2Fe-2S] domain 431 502 1.8E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Pfam PF01266 FAD dependent oxidoreductase 24 366 2.1E-38 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Gene3D G3DSA:2.102.10.10 392 505 1.1E-27 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 SUPERFAMILY SSF50022 417 505 1.07E-23 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 454 465 4.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 475 487 4.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 487 499 4.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Gene3D G3DSA:3.50.50.60 334 391 9.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Gene3D G3DSA:3.50.50.60 161 241 9.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS15355 9220d1417c3a0dcaa6152494e849a090 507 Gene3D G3DSA:3.50.50.60 19 102 9.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 Gene3D G3DSA:2.60.120.280 22 90 1.2E-4 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 Pfam PF12833 Helix-turn-helix domain 187 259 1.0E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 PANTHER PTHR11019 15 131 2.7E-15 T 23-04-2016 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 PANTHER PTHR11019 149 258 2.7E-15 T 23-04-2016 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 SMART SM00342 177 260 1.2E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 Gene3D G3DSA:1.10.10.60 169 213 6.1E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 Gene3D G3DSA:1.10.10.60 214 259 4.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 SUPERFAMILY SSF51215 22 95 4.58E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS14255 015b79c4ac51bc6e723788f5ed55cb15 263 SUPERFAMILY SSF46689 214 259 8.06E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 SUPERFAMILY SSF52540 27 87 2.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 SUPERFAMILY SSF52540 120 274 2.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 SMART SM00382 43 205 1.1E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 Pfam PF07728 AAA domain (dynein-related subfamily) 46 199 2.0E-12 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 Gene3D G3DSA:3.40.50.300 31 229 1.3E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 PANTHER PTHR22908:SF67 18 287 3.3E-78 T 23-04-2016 NIAKO_RS25340 b82ca900509b365309c2de085d3d564e 296 PANTHER PTHR22908 18 287 3.3E-78 T 23-04-2016 NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 Gene3D G3DSA:3.40.50.970 1 157 8.9E-38 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 PANTHER PTHR11624 1 305 5.7E-46 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 SUPERFAMILY SSF52922 182 275 3.81E-5 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 SMART SM00861 1 160 3.5E-22 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 PANTHER PTHR11624:SF27 1 305 5.7E-46 T 23-04-2016 NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 Pfam PF02779 Transketolase, pyrimidine binding domain 1 156 1.4E-24 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS27355 e9527685e87a827339c1b00006be2ed6 308 SUPERFAMILY SSF52518 1 157 5.14E-38 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 Pfam PF00561 alpha/beta hydrolase fold 37 323 6.1E-28 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 Gene3D G3DSA:3.40.50.1820 21 335 2.0E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 8 334 3.1E-110 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 PIRSF PIRSF000443 1 336 5.7E-108 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 PANTHER PTHR32268 9 335 8.6E-109 T 23-04-2016 NIAKO_RS34400 68cc8ed91a84aa2e5ea6897e7936957d 336 SUPERFAMILY SSF53474 4 335 6.62E-81 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 SUPERFAMILY SSF102712 1 133 2.22E-28 T 23-04-2016 NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 PANTHER PTHR34858:SF1 1 139 2.3E-27 T 23-04-2016 NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 Pfam PF14464 Prokaryotic homologs of the JAB domain 7 125 2.5E-27 T 23-04-2016 IPR028090 JAB domain, prokaryotic NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 Gene3D G3DSA:3.40.140.10 1 132 5.2E-26 T 23-04-2016 NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 SMART SM00232 1 136 2.7E-17 T 23-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 NIAKO_RS00465 a729e0492d414bf87efa09f0ca4e184b 142 PANTHER PTHR34858 1 139 2.3E-27 T 23-04-2016 NIAKO_RS25645 f9c93d4ed8e436897f60a7652eb12af3 228 Gene3D G3DSA:1.20.5.170 20 57 3.7E-4 T 23-04-2016 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 553 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 2.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SUPERFAMILY SSF48452 57 176 8.43E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SUPERFAMILY SSF48452 182 300 6.83E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Gene3D G3DSA:1.25.40.10 72 178 2.1E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00388 389 456 3.4E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Gene3D G3DSA:1.10.287.130 381 452 1.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Pfam PF13424 Tetratricopeptide repeat 77 136 2.3E-7 T 23-04-2016 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Pfam PF13424 Tetratricopeptide repeat 144 209 2.2E-10 T 23-04-2016 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 390 454 4.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00387 502 612 1.2E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 611 6.0E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Gene3D G3DSA:3.30.565.10 462 610 1.2E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 104 137 0.45 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 64 97 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 144 177 2.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 266 299 13.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 186 219 4.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SMART SM00028 226 259 9.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SUPERFAMILY SSF55874 446 611 3.8E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 PANTHER PTHR24423 368 610 6.5E-62 T 23-04-2016 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 SUPERFAMILY SSF47384 376 455 2.35E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS27470 a2bb62b50f76dca635193e50aa2edc12 612 Gene3D G3DSA:1.25.40.10 188 298 2.8E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 Gene3D G3DSA:3.40.50.2300 5 160 4.4E-24 T 23-04-2016 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 SMART SM00421 155 212 1.1E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 2.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 PANTHER PTHR26402 6 220 9.7E-42 T 23-04-2016 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 Gene3D G3DSA:1.10.10.10 161 218 2.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 SUPERFAMILY SSF46894 146 218 6.46E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 SMART SM00448 6 120 4.8E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 SUPERFAMILY SSF52172 6 136 2.7E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 PANTHER PTHR26402:SF458 6 220 9.7E-42 T 23-04-2016 NIAKO_RS32850 3c8911a619b5691b6e8c6951220de47d 220 Pfam PF00072 Response regulator receiver domain 8 120 2.5E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 7 65 12.394 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 ProSitePatterns PS00579 Ribosomal protein L29 signature. 44 58 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 SUPERFAMILY SSF46561 10 67 5.89E-14 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 11 64 9.9E-13 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 Gene3D G3DSA:1.10.287.310 10 68 1.2E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22960 1d930328bbc98d8815663c5367d6875a 69 Pfam PF00831 Ribosomal L29 protein 11 65 1.2E-15 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 PANTHER PTHR10196:SF41 1 502 4.3E-160 T 23-04-2016 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 4.1E-53 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 Gene3D G3DSA:3.30.420.40 260 489 4.4E-44 T 23-04-2016 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 SUPERFAMILY SSF53067 1 248 4.21E-60 T 23-04-2016 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 SUPERFAMILY SSF53067 255 489 7.96E-46 T 23-04-2016 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 286 446 3.0E-24 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 PANTHER PTHR10196 1 502 4.3E-160 T 23-04-2016 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 PIRSF PIRSF000538 1 499 1.9E-115 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS13940 76f7c7884c036a2393e237153c3ad641 502 Gene3D G3DSA:3.30.420.40 1 248 7.9E-61 T 23-04-2016 NIAKO_RS04085 72f9af44cd6691d21e3eac0cfb75007d 439 PANTHER PTHR30203 26 428 5.9E-43 T 23-04-2016 NIAKO_RS04085 72f9af44cd6691d21e3eac0cfb75007d 439 Gene3D G3DSA:1.20.1600.10 25 436 6.2E-59 T 23-04-2016 NIAKO_RS04085 72f9af44cd6691d21e3eac0cfb75007d 439 Pfam PF02321 Outer membrane efflux protein 33 238 1.0E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS04085 72f9af44cd6691d21e3eac0cfb75007d 439 Pfam PF02321 Outer membrane efflux protein 265 436 2.6E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS04085 72f9af44cd6691d21e3eac0cfb75007d 439 SUPERFAMILY SSF56954 2 436 4.32E-68 T 23-04-2016 NIAKO_RS08745 d84e8d7a96ee89a5d3f74c67b4f8f64d 133 Gene3D G3DSA:3.40.50.2300 4 121 2.5E-23 T 23-04-2016 NIAKO_RS08745 d84e8d7a96ee89a5d3f74c67b4f8f64d 133 SUPERFAMILY SSF52172 6 122 2.7E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08745 d84e8d7a96ee89a5d3f74c67b4f8f64d 133 SMART SM00448 7 118 9.2E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08745 d84e8d7a96ee89a5d3f74c67b4f8f64d 133 PANTHER PTHR26402 7 118 2.7E-21 T 23-04-2016 NIAKO_RS08745 d84e8d7a96ee89a5d3f74c67b4f8f64d 133 Pfam PF00072 Response regulator receiver domain 9 118 1.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 PANTHER PTHR22925:SF7 24 311 1.9E-62 T 23-04-2016 NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 PIRSF PIRSF026534 8 316 5.5E-98 T 23-04-2016 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 UniPathway: UPA00667 NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 PANTHER PTHR22925 24 311 1.9E-62 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 Gene3D G3DSA:2.115.10.20 16 313 2.9E-84 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 Pfam PF04616 Glycosyl hydrolases family 43 23 311 1.7E-54 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS03550 d979cb83fbf4172ac9fc862909d406bf 317 SUPERFAMILY SSF75005 10 312 5.68E-76 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 Pfam PF00756 Putative esterase 50 201 2.0E-21 T 23-04-2016 IPR000801 Putative esterase NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 Pfam PF00756 Putative esterase 410 632 3.3E-29 T 23-04-2016 IPR000801 Putative esterase NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 PANTHER PTHR10907 400 589 8.8E-32 T 23-04-2016 NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 SUPERFAMILY SSF81296 307 371 4.02E-7 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 SUPERFAMILY SSF53474 36 277 1.26E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 Gene3D G3DSA:3.40.50.1820 373 640 9.4E-79 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 Gene3D G3DSA:3.40.50.1820 1 279 3.3E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 Gene3D G3DSA:2.60.40.10 304 372 3.4E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 PANTHER PTHR10907:SF33 400 589 8.8E-32 T 23-04-2016 NIAKO_RS12035 13b86890674fd81c6060751f64f988cc 640 SUPERFAMILY SSF53474 393 639 8.69E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19075 51f7b55855590f981c77834894dcf39b 126 Gene3D G3DSA:3.10.450.50 7 123 5.8E-26 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS19075 51f7b55855590f981c77834894dcf39b 126 SUPERFAMILY SSF54427 11 124 8.78E-24 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS19075 51f7b55855590f981c77834894dcf39b 126 Pfam PF12893 Putative lumazine-binding 13 119 1.6E-20 T 23-04-2016 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 Gene3D G3DSA:3.40.720.10 22 208 3.3E-54 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 Pfam PF00884 Sulfatase 25 197 4.3E-32 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 SUPERFAMILY SSF53649 23 97 6.83E-47 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 SUPERFAMILY SSF53649 125 202 6.83E-47 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 PANTHER PTHR10342:SF199 21 101 1.3E-52 T 23-04-2016 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 PANTHER PTHR10342:SF199 123 197 1.3E-52 T 23-04-2016 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 ProSitePatterns PS00523 Sulfatases signature 1. 71 83 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 PANTHER PTHR10342 21 101 1.3E-52 T 23-04-2016 NIAKO_RS09380 7ecda4635e067b0ad141241cb1dfa6aa 240 PANTHER PTHR10342 123 197 1.3E-52 T 23-04-2016 NIAKO_RS37430 b0f89ad68db42406b38528b20cbc1ad6 320 Gene3D G3DSA:3.90.550.10 6 238 2.6E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37430 b0f89ad68db42406b38528b20cbc1ad6 320 PANTHER PTHR22916 1 130 4.5E-39 T 23-04-2016 NIAKO_RS37430 b0f89ad68db42406b38528b20cbc1ad6 320 Pfam PF00535 Glycosyl transferase family 2 9 134 4.9E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS37430 b0f89ad68db42406b38528b20cbc1ad6 320 SUPERFAMILY SSF53448 6 234 4.67E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS08400 ce104f79bb19523b694260dfe8809461 1437 Pfam PF00041 Fibronectin type III domain 295 365 5.8E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08400 ce104f79bb19523b694260dfe8809461 1437 SUPERFAMILY SSF49265 294 370 7.3E-11 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS08400 ce104f79bb19523b694260dfe8809461 1437 Gene3D G3DSA:2.60.40.10 300 368 6.0E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF46689 1260 1308 1.36E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF52172 1061 1190 4.98E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SMART SM00387 910 1029 1.1E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF00512 His Kinase A (phospho-acceptor) domain 800 862 1.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:2.120.10.30 209 276 2.2E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:2.120.10.30 377 488 5.2E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07495 Y_Y_Y domain 689 745 1.1E-14 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:3.30.565.10 851 1028 4.2E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF12833 Helix-turn-helix domain 1231 1307 9.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF00072 Response regulator receiver domain 1064 1174 5.9E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SMART SM00448 1062 1174 1.2E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF63829 34 251 2.42E-10 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF55874 853 1027 1.57E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:1.10.287.130 790 850 3.5E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SMART SM00388 799 864 3.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:2.120.10.30 277 376 1.0E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:2.120.10.30 491 565 5.1E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF63829 183 431 9.48E-16 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 989 1007 1.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 954 968 1.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 972 982 1.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1013 1026 1.0E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423:SF487 302 372 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423:SF487 742 1216 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423:SF487 213 274 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1261 1303 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:1.10.10.60 1205 1260 7.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 911 1028 1.9E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423 302 372 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423 742 1216 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 PANTHER PTHR24423 213 274 1.0E-139 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:3.40.50.2300 1057 1191 6.4E-43 T 23-04-2016 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SMART SM00342 1224 1307 1.6E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 SUPERFAMILY SSF47384 787 863 1.51E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Gene3D G3DSA:1.10.10.60 1261 1306 1.6E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 259 280 0.001 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 494 516 0.0017 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 400 422 0.0025 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 354 376 2.6E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 452 469 0.0061 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS11785 3606a34862a38b5aa52e35a269a1d2c3 1316 Pfam PF07494 Two component regulator propeller 210 231 0.01 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 PANTHER PTHR10366 2 322 8.2E-122 T 23-04-2016 NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 SUPERFAMILY SSF51735 1 294 3.94E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 190 1.5E-28 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 PANTHER PTHR10366:SF448 2 322 8.2E-122 T 23-04-2016 NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 Gene3D G3DSA:3.90.25.10 206 295 8.0E-5 T 23-04-2016 NIAKO_RS12525 4a00b2604198172e66a85254e9434f00 328 Gene3D G3DSA:3.40.50.720 1 205 3.8E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17095 e4b9fc6a4793510f8e4b36bf5cd06dc4 158 Pfam PF09980 Predicted membrane protein (DUF2214) 7 155 2.8E-10 T 23-04-2016 IPR018706 Protein of unknown function DUF2214, membrane NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 SUPERFAMILY SSF46785 6 67 2.35E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 SUPERFAMILY SSF54909 68 149 1.74E-17 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 SMART SM00344 7 114 2.9E-33 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 7.0E-15 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 PANTHER PTHR30154:SF2 1 150 2.7E-48 T 23-04-2016 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 PANTHER PTHR30154 1 150 2.7E-48 T 23-04-2016 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 7.1E-13 T 23-04-2016 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.5E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.5E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.5E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 Gene3D G3DSA:3.30.70.920 71 145 1.8E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS31930 902534bca47750da0fb33d92b5a187e3 156 Gene3D G3DSA:1.10.10.10 3 56 1.8E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 253 270 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 393 416 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 38 57 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 383 393 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 273 299 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00463 E-class P450 group I signature 349 373 1.8E-21 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 Pfam PF00067 Cytochrome P450 13 435 8.7E-68 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 SUPERFAMILY SSF48264 11 443 6.55E-89 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PANTHER PTHR24305 20 444 1.4E-73 T 23-04-2016 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 386 395 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00385 P450 superfamily signature 393 404 1.0E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00385 P450 superfamily signature 384 393 1.0E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00385 P450 superfamily signature 310 321 1.0E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 PRINTS PR00385 P450 superfamily signature 264 281 1.0E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS25395 d5f6cd6a78f3f219fb497a98157c2ccc 450 Gene3D G3DSA:1.10.630.10 9 443 3.7E-96 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NIAKO_RS29880 2c01a503ba645dbfa485b54b320fc682 296 SUPERFAMILY SSF144091 11 209 2.09E-23 T 23-04-2016 NIAKO_RS29880 2c01a503ba645dbfa485b54b320fc682 296 Pfam PF01694 Rhomboid family 59 209 4.5E-20 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS29880 2c01a503ba645dbfa485b54b320fc682 296 Gene3D G3DSA:1.20.1540.10 16 208 2.0E-20 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 Gene3D G3DSA:3.40.50.720 2 173 2.2E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 PANTHER PTHR10366:SF399 5 309 2.1E-125 T 23-04-2016 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 PRINTS PR01713 Nucleotide sugar epimerase signature 235 250 9.0E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 PRINTS PR01713 Nucleotide sugar epimerase signature 274 291 9.0E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 9.0E-6 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 SUPERFAMILY SSF51735 1 311 2.08E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 Gene3D G3DSA:3.90.25.10 174 313 5.8E-52 T 23-04-2016 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 PANTHER PTHR10366 5 309 2.1E-125 T 23-04-2016 NIAKO_RS24685 0a2205bfed4e3df809b124511630bd67 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 302 1.3E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 457 1.4E-64 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 PANTHER PTHR11819 5 298 1.4E-164 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 PANTHER PTHR11819 314 476 1.4E-164 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 PANTHER PTHR11819:SF163 5 298 1.4E-164 T 23-04-2016 NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 PANTHER PTHR11819:SF163 314 476 1.4E-164 T 23-04-2016 NIAKO_RS04550 10e585c33e51de6e8cddeab20175c0e6 514 Pfam PF00474 Sodium:solute symporter family 36 457 2.1E-38 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 32 1080 6.5E-257 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF56935 900 944 8.06E-98 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF56935 983 1080 8.06E-98 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF56935 346 434 8.06E-98 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF56935 469 824 8.06E-98 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF56935 110 265 8.06E-98 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Pfam PF13715 CarboxypepD_reg-like domain 33 114 1.1E-13 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 241 9.8E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 217 247 3.1E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 PANTHER PTHR11532:SF57 547 1078 5.7E-250 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 PANTHER PTHR11532:SF57 4 437 5.7E-250 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 PANTHER PTHR11532 547 1078 5.7E-250 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 PANTHER PTHR11532 4 437 5.7E-250 T 23-04-2016 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Gene3D G3DSA:2.40.170.20 909 1080 5.9E-56 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Gene3D G3DSA:2.40.170.20 355 841 5.9E-56 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Gene3D G3DSA:2.40.170.20 244 261 5.9E-56 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Gene3D G3DSA:2.170.130.10 123 243 1.1E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 Gene3D G3DSA:2.60.40.1120 32 122 4.4E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03600 254c93249b764e9d86bb6d00480cbfbd 1080 SUPERFAMILY SSF49464 33 126 4.45E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 Gene3D G3DSA:1.10.10.60 153 199 5.6E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 Gene3D G3DSA:1.10.10.60 202 239 2.9E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 SUPERFAMILY SSF52172 2 129 3.13E-39 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 PANTHER PTHR24423 2 157 3.4E-59 T 23-04-2016 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 SMART SM00448 3 115 1.9E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 SMART SM00342 165 248 3.5E-9 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 SUPERFAMILY SSF46689 202 241 2.37E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 Gene3D G3DSA:3.40.50.2300 2 129 4.2E-43 T 23-04-2016 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 PANTHER PTHR24423:SF486 2 157 3.4E-59 T 23-04-2016 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 Pfam PF00072 Response regulator receiver domain 5 115 1.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36950 49d90b4924b37ed0af16dd6b1c7e427c 256 Pfam PF12833 Helix-turn-helix domain 171 239 2.0E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423:SF486 796 1033 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423:SF486 342 484 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423:SF486 530 643 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SUPERFAMILY SSF55874 867 1032 9.04E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:2.120.10.30 358 504 2.6E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:2.120.10.30 505 612 1.2E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF07495 Y_Y_Y domain 707 767 4.1E-14 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:1.10.287.130 804 872 1.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SUPERFAMILY SSF63829 39 198 2.13E-16 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423 796 1033 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423 342 484 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PANTHER PTHR24423 530 643 1.1E-69 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 975 3.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1012 3.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1018 1031 3.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 PRINTS PR00344 Bacterial sensor protein C-terminal signature 979 989 3.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF07494 Two component regulator propeller 348 369 4.8E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF07494 Two component regulator propeller 37 59 5.4E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF07494 Two component regulator propeller 528 551 0.015 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF07494 Two component regulator propeller 299 321 6.8E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SMART SM00387 923 1034 2.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 924 1033 4.9E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:2.120.10.30 87 207 3.2E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:2.120.10.30 220 357 5.4E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Gene3D G3DSA:3.30.565.10 879 1037 5.3E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SMART SM00388 811 877 1.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 Pfam PF00512 His Kinase A (phospho-acceptor) domain 813 875 1.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SUPERFAMILY SSF47384 803 877 6.28E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SUPERFAMILY SSF63829 224 397 6.54E-11 T 23-04-2016 NIAKO_RS24525 21da4b13f3e5c72013da815a3b486437 1039 SUPERFAMILY SSF63829 364 593 6.54E-19 T 23-04-2016 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PIRSF PIRSF006615 5 502 3.1E-172 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 SUPERFAMILY SSF55486 8 492 5.74E-105 T 23-04-2016 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PANTHER PTHR34217:SF1 3 502 4.5E-214 T 23-04-2016 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 293 309 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 380 397 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 448 466 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 334 353 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 150 170 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 266 285 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 403 424 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 229 245 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 246 265 3.2E-59 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 496 4.1E-111 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 NIAKO_RS27005 713bb47c7b65e4cbeda7f4c8b761b6ec 502 PANTHER PTHR34217 3 502 4.5E-214 T 23-04-2016 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 SUPERFAMILY SSF51338 32 86 1.38E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 SUPERFAMILY SSF51338 380 407 1.38E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 Pfam PF01979 Amidohydrolase family 281 401 4.6E-11 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 Gene3D G3DSA:2.30.40.10 29 131 1.8E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 Gene3D G3DSA:2.30.40.10 320 412 5.3E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 PANTHER PTHR11271:SF39 1 420 1.0E-16 T 23-04-2016 NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 SUPERFAMILY SSF51556 200 381 5.85E-14 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS00775 b8fb115610ff8ec30623fcb199d780e4 435 PANTHER PTHR11271 1 420 1.0E-16 T 23-04-2016 NIAKO_RS35950 39fb2b1edafa2c19d67148bc1e8788ec 206 Pfam PF13590 Domain of unknown function (DUF4136) 37 200 9.3E-18 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 NIAKO_RS31065 e6b8d3e6d22d743f748caef5e26bffbe 546 PANTHER PTHR33908:SF1 1 312 7.3E-23 T 23-04-2016 NIAKO_RS31065 e6b8d3e6d22d743f748caef5e26bffbe 546 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 39 188 5.0E-17 T 23-04-2016 NIAKO_RS31065 e6b8d3e6d22d743f748caef5e26bffbe 546 PANTHER PTHR33908 1 312 7.3E-23 T 23-04-2016 NIAKO_RS05320 23bfb438fa86b98d93a52771e036149e 860 Pfam PF01844 HNH endonuclease 824 858 8.5E-6 T 23-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 NIAKO_RS05320 23bfb438fa86b98d93a52771e036149e 860 SMART SM00507 801 854 8.1E-4 T 23-04-2016 IPR003615 HNH nuclease NIAKO_RS05320 23bfb438fa86b98d93a52771e036149e 860 Pfam PF03235 Protein of unknown function DUF262 34 179 2.0E-17 T 23-04-2016 IPR004919 Domain of unknown function DUF262 NIAKO_RS05320 23bfb438fa86b98d93a52771e036149e 860 Pfam PF03235 Protein of unknown function DUF262 420 672 4.8E-9 T 23-04-2016 IPR004919 Domain of unknown function DUF262 NIAKO_RS05320 23bfb438fa86b98d93a52771e036149e 860 PANTHER PTHR39639 23 181 3.6E-13 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 SMART SM01360 1256 1346 6.2E-10 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Gene3D G3DSA:1.50.10.20 1466 1501 6.8E-7 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Gene3D G3DSA:1.50.10.20 1547 1775 6.8E-7 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 SUPERFAMILY SSF56935 1125 1234 2.47E-11 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 PANTHER PTHR11532:SF57 1162 1233 1.0E-15 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 PANTHER PTHR11532:SF57 1128 1145 1.0E-15 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Pfam PF07715 TonB-dependent Receptor Plug Domain 1114 1227 1.3E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 PANTHER PTHR11532 1162 1233 1.0E-15 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 PANTHER PTHR11532 1128 1145 1.0E-15 T 23-04-2016 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Pfam PF00207 Alpha-2-macroglobulin family 1256 1336 3.3E-10 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 SUPERFAMILY SSF48239 1538 1775 3.45E-8 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 SUPERFAMILY SSF48239 1462 1496 3.45E-8 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Pfam PF01835 MG2 domain 556 670 1.5E-13 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 NIAKO_RS35045 ffa2460f13cc61d8c525f3388484255e 1991 Gene3D G3DSA:2.170.130.10 1104 1230 2.5E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16305 8da73b05ce62af552b3823e0b12e6e20 101 Pfam PF00072 Response regulator receiver domain 8 98 5.6E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16305 8da73b05ce62af552b3823e0b12e6e20 101 SUPERFAMILY SSF52172 7 98 2.56E-16 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS16305 8da73b05ce62af552b3823e0b12e6e20 101 Gene3D G3DSA:3.40.50.2300 6 100 1.4E-17 T 23-04-2016 NIAKO_RS16305 8da73b05ce62af552b3823e0b12e6e20 101 PANTHER PTHR26402 6 101 1.0E-12 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PANTHER PTHR32472 1 458 6.4E-191 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 Gene3D G3DSA:3.30.230.10 288 457 1.6E-33 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PANTHER PTHR32472:SF10 1 458 6.4E-191 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 Gene3D G3DSA:3.40.50.300 59 277 4.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 84 112 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 124 141 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 174 198 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 322 345 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 248 274 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 10 34 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 PRINTS PR01874 DNA repair protein radA signature 213 241 8.0E-89 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 Pfam PF13481 AAA domain 73 222 2.5E-13 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 427 9.6E-11 T 23-04-2016 NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 SUPERFAMILY SSF54211 303 457 4.17E-38 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 SUPERFAMILY SSF54211 255 269 4.17E-38 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 SMART SM00382 92 244 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 SUPERFAMILY SSF52540 70 285 3.4E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28540 48478462324d6f18f3f65515ab707331 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 9.1E-177 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 PANTHER PTHR30173:SF20 1 186 4.5E-40 T 23-04-2016 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 Gene3D G3DSA:1.10.1740.10 5 113 4.4E-21 T 23-04-2016 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 Pfam PF04542 Sigma-70 region 2 27 93 1.3E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 177 7.6E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 SUPERFAMILY SSF88659 101 178 1.02E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 Gene3D G3DSA:1.10.10.10 118 178 1.2E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 SMART SM00421 128 181 0.004 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 Pfam PF08281 Sigma-70, region 4 123 173 5.3E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 SUPERFAMILY SSF88946 3 107 4.87E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 177 3.9E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS16535 5826efd6c08324bc648681706611677b 186 PANTHER PTHR30173 1 186 4.5E-40 T 23-04-2016 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 PANTHER PTHR30173 1 204 1.9E-23 T 23-04-2016 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 178 6.5E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 Gene3D G3DSA:1.10.10.10 121 180 5.3E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 Pfam PF04542 Sigma-70 region 2 27 91 1.0E-6 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 Gene3D G3DSA:1.10.1740.10 7 116 9.8E-14 T 23-04-2016 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 SUPERFAMILY SSF88659 104 181 2.06E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 SUPERFAMILY SSF88946 7 108 9.42E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13085 e87d7516ea2767d6f64f2dc513f0431b 208 Pfam PF08281 Sigma-70, region 4 124 176 1.4E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 PRINTS PR00069 Aldo-keto reductase signature 143 160 5.7E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 PRINTS PR00069 Aldo-keto reductase signature 112 130 5.7E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 Pfam PF00248 Aldo/keto reductase family 18 318 1.2E-67 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 Gene3D G3DSA:3.20.20.100 1 323 9.1E-100 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 PANTHER PTHR11732 1 328 1.6E-129 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS03395 66e83671881e52543d02c386231e7df3 332 SUPERFAMILY SSF51430 1 323 5.89E-100 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 Pfam PF08281 Sigma-70, region 4 124 174 2.0E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 SUPERFAMILY SSF88946 7 97 2.59E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 175 1.7E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 PANTHER PTHR30173:SF20 6 197 3.8E-33 T 23-04-2016 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 Gene3D G3DSA:1.10.10.10 118 177 1.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 SUPERFAMILY SSF88659 126 175 1.2E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 Pfam PF04542 Sigma-70 region 2 25 90 1.8E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 Gene3D G3DSA:1.10.1740.10 7 107 8.8E-17 T 23-04-2016 NIAKO_RS24455 da981b26ef18c431414b6aac8eea2e6c 197 PANTHER PTHR30173 6 197 3.8E-33 T 23-04-2016 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 PANTHER PTHR30173 10 186 2.3E-42 T 23-04-2016 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 SUPERFAMILY SSF88659 108 173 1.29E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 Gene3D G3DSA:1.10.1740.10 9 80 1.6E-16 T 23-04-2016 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 Pfam PF04542 Sigma-70 region 2 13 78 3.7E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 PANTHER PTHR30173:SF20 10 186 2.3E-42 T 23-04-2016 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 Pfam PF08281 Sigma-70, region 4 114 167 1.9E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 9 169 8.1E-45 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 SUPERFAMILY SSF88946 10 94 4.32E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 Gene3D G3DSA:1.10.10.10 114 170 4.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26585 9361d9a830cae6157e479d6b2c00d2f7 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 169 9.9E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 SUPERFAMILY SSF52467 208 366 2.07E-54 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Gene3D G3DSA:3.40.50.1220 208 368 1.8E-56 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 PANTHER PTHR18968:SF116 1 577 3.5E-271 T 23-04-2016 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 20 575 8.8E-211 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 187 6.9E-54 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 554 4.0E-44 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 444 463 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 211 344 2.2E-41 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 PANTHER PTHR18968 1 577 3.5E-271 T 23-04-2016 NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 SUPERFAMILY SSF52518 384 572 1.27E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 SUPERFAMILY SSF52518 17 191 7.98E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Gene3D G3DSA:3.40.50.970 18 191 5.4E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00495 157e75c5f858850fcd92d165a109f188 578 Gene3D G3DSA:3.40.50.970 379 575 6.1E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 PANTHER PTHR11993:SF28 130 577 3.1E-265 T 23-04-2016 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 189 582 44.981 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 198 582 9.1E-163 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 PANTHER PTHR11993 130 577 3.1E-265 T 23-04-2016 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 235 246 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 312 582 1.1E-109 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 SUPERFAMILY SSF56762 208 582 1.19E-128 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 159 1.1E-37 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 149 3.0E-15 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 SUPERFAMILY SSF143243 20 212 4.71E-54 T 23-04-2016 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 Gene3D G3DSA:1.10.645.10 201 565 5.0E-58 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 2.4E-37 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS14585 5a96e7fbf2c2110826d13350f828801e 582 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 1 582 65.781 T 23-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 NIAKO_RS12390 9803f511a34b20ce1e7bf27860c0b004 181 PANTHER PTHR38011:SF2 13 181 1.5E-12 T 23-04-2016 NIAKO_RS12390 9803f511a34b20ce1e7bf27860c0b004 181 Pfam PF01872 RibD C-terminal domain 16 173 1.4E-9 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS12390 9803f511a34b20ce1e7bf27860c0b004 181 SUPERFAMILY SSF53597 3 178 8.39E-17 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS12390 9803f511a34b20ce1e7bf27860c0b004 181 PANTHER PTHR38011 13 181 1.5E-12 T 23-04-2016 NIAKO_RS12390 9803f511a34b20ce1e7bf27860c0b004 181 Gene3D G3DSA:3.40.430.10 22 178 2.1E-9 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS28565 5ff15ea60d0a731e4cf281debb8bfa45 425 PANTHER PTHR21600 57 312 2.4E-52 T 23-04-2016 NIAKO_RS28565 5ff15ea60d0a731e4cf281debb8bfa45 425 Pfam PF04468 PSP1 C-terminal conserved region 114 199 7.4E-25 T 23-04-2016 IPR007557 PSP1, C-terminal NIAKO_RS28565 5ff15ea60d0a731e4cf281debb8bfa45 425 PANTHER PTHR21600:SF3 57 312 2.4E-52 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Gene3D G3DSA:2.30.38.10 373 447 6.4E-11 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 ProSitePatterns PS00012 Phosphopantetheine attachment site. 615 630 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 SMART SM01294 604 656 0.0068 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Pfam PF00501 AMP-binding enzyme 52 455 1.1E-72 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Pfam PF00550 Phosphopantetheine attachment site 591 656 5.0E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 PANTHER PTHR22754 52 564 5.6E-137 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Gene3D G3DSA:1.10.1200.10 589 658 3.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 SMART SM00823 Phosphopantetheine attachment site 588 660 6.2E-8 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 SUPERFAMILY SSF47336 587 660 3.4E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Gene3D G3DSA:3.40.50.980 39 193 8.9E-29 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Gene3D G3DSA:3.30.300.30 448 551 8.4E-16 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 Gene3D G3DSA:3.40.50.980 194 358 4.9E-36 T 23-04-2016 NIAKO_RS11530 da5a05bff33fd3bf52301a1d637d6fbb 674 SUPERFAMILY SSF56801 29 555 3.4E-100 T 23-04-2016 NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 PANTHER PTHR41251 1 249 3.7E-64 T 23-04-2016 NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 SUPERFAMILY SSF100939 1 255 5.89E-50 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 PIRSF PIRSF006493 1 257 5.1E-88 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 PANTHER PTHR41251:SF1 1 249 3.7E-64 T 23-04-2016 NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 250 31.174 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 252 7.6E-83 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 186 1.5E-38 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 SMART SM00559 52 181 1.4E-24 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NIAKO_RS20995 3a0d897efc9b30f3c97088217c141c36 257 Gene3D G3DSA:2.40.290.10 4 170 7.2E-15 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PANTHER PTHR11731:SF140 130 632 1.0E-100 T 23-04-2016 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 Gene3D G3DSA:2.120.10.60 55 291 1.2E-18 T 23-04-2016 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 SUPERFAMILY SSF82171 42 354 7.85E-27 T 23-04-2016 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 Pfam PF00326 Prolyl oligopeptidase family 411 621 5.6E-44 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 94 348 2.6E-11 T 23-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 Gene3D G3DSA:3.40.50.1820 292 620 5.7E-92 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 SUPERFAMILY SSF53474 365 620 2.84E-69 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 394 412 8.7E-6 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 478 498 8.7E-6 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 554 576 8.7E-6 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 420 444 8.7E-6 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS25510 02708ad6f829f934686f6dfe95e61b1c 633 PANTHER PTHR11731 130 632 1.0E-100 T 23-04-2016 NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 SUPERFAMILY SSF82784 2 135 1.96E-33 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 Pfam PF02566 OsmC-like protein 41 131 4.0E-18 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 Gene3D G3DSA:3.30.300.20 1 135 1.2E-47 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 133 4.0E-54 T 23-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 PANTHER PTHR33797:SF1 1 136 3.5E-48 T 23-04-2016 NIAKO_RS07910 791a2f78d9a87e59b5e1bcc9bc03f8a8 136 PANTHER PTHR33797 1 136 3.5E-48 T 23-04-2016 NIAKO_RS06940 b88c1922e9cc003aadd5ce40518b5c05 386 Gene3D G3DSA:3.40.640.10 58 279 1.4E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS06940 b88c1922e9cc003aadd5ce40518b5c05 386 PANTHER PTHR10289 58 352 1.2E-59 T 23-04-2016 NIAKO_RS06940 b88c1922e9cc003aadd5ce40518b5c05 386 Pfam PF01212 Beta-eliminating lyase 63 317 1.1E-46 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 NIAKO_RS06940 b88c1922e9cc003aadd5ce40518b5c05 386 SUPERFAMILY SSF53383 57 344 1.25E-69 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.2E-15 T 23-04-2016 NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 PANTHER PTHR30154 1 143 2.4E-39 T 23-04-2016 NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 Gene3D G3DSA:1.10.10.10 1 52 1.9E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 SUPERFAMILY SSF46785 1 73 6.15E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 Gene3D G3DSA:3.30.70.920 54 143 8.1E-24 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 SUPERFAMILY SSF54909 63 142 6.3E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 138 4.3E-18 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS03090 43d144528480f001d2191af3c50f169e 149 SMART SM00344 1 107 5.6E-32 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 55 172 4.8E-5 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 PANTHER PTHR22604 1 312 2.4E-25 T 23-04-2016 NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 187 261 4.4E-6 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 SUPERFAMILY SSF51735 49 198 1.09E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 Gene3D G3DSA:3.30.360.10 181 382 6.7E-38 T 23-04-2016 NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 Gene3D G3DSA:3.40.50.720 53 180 5.7E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06550 3c8eb4934f92757cd69a6fa82bf43cae 389 SUPERFAMILY SSF55347 181 348 2.62E-22 T 23-04-2016 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 SUPERFAMILY SSF56214 100 210 1.24E-22 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 Gene3D G3DSA:3.90.470.20 111 193 1.3E-16 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 100 167 1.0E-12 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 SUPERFAMILY SSF56214 5 93 1.41E-9 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 Gene3D G3DSA:3.90.470.20 9 110 9.6E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 PANTHER PTHR12215:SF10 3 156 1.4E-21 T 23-04-2016 NIAKO_RS11480 a68b81a2a65a2338258672e04bc8bb7d 228 PANTHER PTHR12215 3 156 1.4E-21 T 23-04-2016 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 SUPERFAMILY SSF111369 69 296 1.31E-17 T 23-04-2016 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 PANTHER PTHR30097 32 346 2.1E-47 T 23-04-2016 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 Gene3D G3DSA:2.40.50.100 68 104 2.2E-9 T 23-04-2016 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 Gene3D G3DSA:2.40.50.100 181 217 2.2E-9 T 23-04-2016 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 361 1.7E-38 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 290 8.0E-27 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS01900 6a18910dd576c85037222f5cb8e3dd0e 376 PANTHER PTHR30097:SF4 32 346 2.1E-47 T 23-04-2016 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 367 2.2E-89 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 137 146 - T 23-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 SUPERFAMILY SSF52540 55 360 1.39E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 Pfam PF00270 DEAD/DEAH box helicase 18 185 5.1E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 PANTHER PTHR13710 4 358 5.6E-116 T 23-04-2016 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 PANTHER PTHR13710 536 557 5.6E-116 T 23-04-2016 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 Pfam PF00271 Helicase conserved C-terminal domain 228 338 5.5E-22 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 SMART SM00490 258 339 6.1E-27 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 SMART SM00487 12 208 4.9E-23 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 Gene3D G3DSA:3.40.50.300 211 380 1.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 Gene3D G3DSA:3.40.50.300 4 204 4.3E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 PANTHER PTHR13710:SF81 4 358 5.6E-116 T 23-04-2016 NIAKO_RS37230 4d6b6a753a9d07bfddab2e8d8aecae5a 560 PANTHER PTHR13710:SF81 536 557 5.6E-116 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 Pfam PF00480 ROK family 96 403 6.7E-52 T 23-04-2016 IPR000600 ROK family NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 SUPERFAMILY SSF46785 27 87 8.11E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 Gene3D G3DSA:3.30.420.40 91 231 1.7E-26 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 SUPERFAMILY SSF53067 93 404 2.92E-45 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 Gene3D G3DSA:1.10.10.10 28 88 4.3E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 ProSitePatterns PS01125 ROK family signature. 226 253 - T 23-04-2016 IPR000600 ROK family NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 PANTHER PTHR18964:SF123 71 406 2.1E-66 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 PANTHER PTHR18964 71 406 2.1E-66 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 Gene3D G3DSA:3.30.420.40 232 384 9.1E-45 T 23-04-2016 NIAKO_RS25770 d90bb301fb02c44bcc856b1ec1246e5c 410 Pfam PF13412 Winged helix-turn-helix DNA-binding 27 70 1.4E-6 T 23-04-2016 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PANTHER PTHR10264:SF83 53 363 2.0E-69 T 23-04-2016 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 SMART SM00244 132 291 1.4E-19 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 SUPERFAMILY SSF117892 171 297 3.27E-29 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PANTHER PTHR10264 53 363 2.0E-69 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 267 285 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 188 209 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 139 161 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 243 266 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 286 307 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 PRINTS PR00721 Stomatin signature 311 334 1.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS33170 b35c6322be56b6000a38b342e6d20a51 366 Pfam PF01145 SPFH domain / Band 7 family 137 307 1.6E-21 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:1.10.10.160 112 195 3.9E-21 T 23-04-2016 IPR013986 DExx box DNA helicase domain NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 SUPERFAMILY SSF52540 1 651 1.14E-169 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:1.10.486.10 394 549 6.4E-38 T 23-04-2016 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 276 4.9E-76 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:3.40.50.300 196 290 5.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:3.40.50.300 1 108 5.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 PANTHER PTHR11070 538 673 4.1E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 PANTHER PTHR11070 1 520 4.1E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 PANTHER PTHR11070:SF7 538 673 4.1E-206 T 23-04-2016 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 PANTHER PTHR11070:SF7 1 520 4.1E-206 T 23-04-2016 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Pfam PF13361 UvrD-like helicase C-terminal domain 282 625 2.4E-71 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:3.40.50.300 561 651 1.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30875 5425c718f663790f922aa03979ed200b 783 Gene3D G3DSA:3.40.50.300 291 393 1.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 PANTHER PTHR30481 14 230 2.8E-19 T 23-04-2016 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 Gene3D G3DSA:1.10.1020.10 67 136 1.5E-8 T 23-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 TIGRFAM TIGR00571 dam: DNA adenine methylase 13 209 1.6E-34 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 16 32 1.99E-10 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 38 52 1.99E-10 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 184 196 1.99E-10 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 16 205 5.2E-25 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 Gene3D G3DSA:3.40.50.150 12 66 3.1E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 Gene3D G3DSA:3.40.50.150 169 235 3.1E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 SUPERFAMILY SSF53335 12 237 7.75E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 PIRSF PIRSF000398 3 281 6.7E-44 T 23-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 NIAKO_RS25430 32d7ad70959bfd6e893224a2a5a07ee7 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NIAKO_RS31240 bdbfab822ea0a476342c31d3d60a06a2 296 Gene3D G3DSA:3.20.20.150 25 288 1.6E-34 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS31240 bdbfab822ea0a476342c31d3d60a06a2 296 SUPERFAMILY SSF51658 38 288 4.42E-42 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS31240 bdbfab822ea0a476342c31d3d60a06a2 296 Pfam PF01261 Xylose isomerase-like TIM barrel 66 209 1.9E-18 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS31240 bdbfab822ea0a476342c31d3d60a06a2 296 PANTHER PTHR12110 68 295 9.8E-17 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 SUPERFAMILY SSF49464 26 91 9.81E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Gene3D G3DSA:2.170.130.10 111 240 4.2E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 26 1059 1.6E-179 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Pfam PF13715 CarboxypepD_reg-like domain 28 109 1.7E-13 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Gene3D G3DSA:2.40.170.20 843 892 9.8E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Gene3D G3DSA:2.40.170.20 342 788 9.8E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 213 243 2.6E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Gene3D G3DSA:2.60.40.1120 27 110 2.9E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 PANTHER PTHR11532 20 448 7.4E-176 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 PANTHER PTHR11532 525 1057 7.4E-176 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 SUPERFAMILY SSF56935 456 788 1.79E-72 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 SUPERFAMILY SSF56935 329 417 1.79E-72 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 SUPERFAMILY SSF56935 105 260 1.79E-72 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 SUPERFAMILY SSF56935 845 895 1.79E-72 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 PANTHER PTHR11532:SF51 20 448 7.4E-176 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 PANTHER PTHR11532:SF51 525 1057 7.4E-176 T 23-04-2016 NIAKO_RS15135 75dee6c630bf0f67171aad611e3841dd 1059 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 237 3.2E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 PANTHER PTHR16026 381 656 1.5E-41 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 PANTHER PTHR16026 57 322 1.5E-41 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 931 1093 1.09E-5 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 47 350 1.01E-76 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF07593 ASPIC and UnbV 549 616 3.5E-21 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 463 525 1.01E-76 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 388 428 1.01E-76 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 635 918 3.01E-56 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 SUPERFAMILY SSF69318 391 536 3.01E-56 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 678 742 5.6E-11 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 792 859 1.2E-9 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 141 187 1.1E-9 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 469 513 4.1E-6 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 65 131 8.2E-15 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 248 310 4.3E-14 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Gene3D G3DSA:2.130.10.130 641 755 1.2E-11 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Gene3D G3DSA:2.130.10.130 47 432 4.4E-46 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Gene3D G3DSA:2.130.10.130 468 526 4.4E-46 T 23-04-2016 NIAKO_RS35825 0c792c87653add506b66fdf015c6af2f 1123 Gene3D G3DSA:2.130.10.130 759 915 3.5E-18 T 23-04-2016 NIAKO_RS28245 bc585e8d51b82e29579b35af24a29e01 487 Pfam PF14322 Starch-binding associating with outer membrane 23 238 1.6E-24 T 23-04-2016 NIAKO_RS28245 bc585e8d51b82e29579b35af24a29e01 487 Pfam PF07980 SusD family 301 487 1.5E-30 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS28245 bc585e8d51b82e29579b35af24a29e01 487 Gene3D G3DSA:1.25.40.10 219 427 5.2E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28245 bc585e8d51b82e29579b35af24a29e01 487 SUPERFAMILY SSF48452 16 487 1.15E-89 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09390 8926d8d6bfa2d2256048560f185d74a1 361 SUPERFAMILY SSF51726 3 345 3.66E-40 T 23-04-2016 NIAKO_RS09390 8926d8d6bfa2d2256048560f185d74a1 361 PANTHER PTHR30519 1 356 2.0E-130 T 23-04-2016 NIAKO_RS09390 8926d8d6bfa2d2256048560f185d74a1 361 Gene3D G3DSA:3.20.20.210 2 352 4.3E-60 T 23-04-2016 NIAKO_RS09390 8926d8d6bfa2d2256048560f185d74a1 361 PANTHER PTHR30519:SF10 1 356 2.0E-130 T 23-04-2016 NIAKO_RS09390 8926d8d6bfa2d2256048560f185d74a1 361 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 8 321 1.3E-7 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 Pfam PF14524 Wzt C-terminal domain 276 391 2.3E-6 T 23-04-2016 IPR029439 Wzt, C-terminal NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 Pfam PF00005 ABC transporter 60 191 2.4E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 Gene3D G3DSA:3.40.50.300 50 253 7.9E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 PANTHER PTHR24220 6 18 9.7E-105 T 23-04-2016 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 PANTHER PTHR24220 57 256 9.7E-105 T 23-04-2016 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 SMART SM00382 69 250 1.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 PANTHER PTHR24220:SF117 6 18 9.7E-105 T 23-04-2016 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 PANTHER PTHR24220:SF117 57 256 9.7E-105 T 23-04-2016 NIAKO_RS33230 65d56fa63f549141b8acd7b0a4aeff21 425 SUPERFAMILY SSF52540 54 250 8.63E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 SMART SM00354 8 80 2.3E-28 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 4.9E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 4.9E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 Gene3D G3DSA:3.40.50.2300 58 181 3.6E-44 T 23-04-2016 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 PANTHER PTHR30146 8 342 1.3E-113 T 23-04-2016 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 SUPERFAMILY SSF47413 9 63 2.72E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 6.0E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 Pfam PF13377 Periplasmic binding protein-like domain 177 338 1.5E-31 T 23-04-2016 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 Gene3D G3DSA:1.10.260.40 8 57 2.4E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 Gene3D G3DSA:3.40.50.2300 182 319 5.2E-48 T 23-04-2016 NIAKO_RS12415 a69bde8e4e892b6ea82675c3e3887309 345 SUPERFAMILY SSF53822 69 340 5.69E-80 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 9 226 1.7E-56 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 SUPERFAMILY SSF54211 9 130 2.58E-38 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Pfam PF07977 FabA-like domain 336 458 3.2E-31 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Gene3D G3DSA:3.10.129.10 324 466 1.9E-51 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 327 466 30.418 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 PANTHER PTHR30272:SF1 250 467 2.8E-93 T 23-04-2016 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 PANTHER PTHR30272 250 467 2.8E-93 T 23-04-2016 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 329 463 5.6E-49 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 8 309 34.862 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Gene3D G3DSA:3.30.1700.10 136 308 2.2E-49 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Gene3D G3DSA:3.30.230.20 9 131 2.9E-42 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 SUPERFAMILY SSF54211 150 304 3.94E-38 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 SUPERFAMILY SSF54637 329 465 2.21E-41 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS34265 cb4a33554f9db5e9908eb1bcbd7b13ee 467 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 10 304 2.0E-90 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NIAKO_RS07725 33771a562084c72455dc50afcdb1e768 301 SUPERFAMILY SSF54001 147 232 1.83E-9 T 23-04-2016 NIAKO_RS07725 33771a562084c72455dc50afcdb1e768 301 SUPERFAMILY SSF54001 263 289 1.83E-9 T 23-04-2016 NIAKO_RS07725 33771a562084c72455dc50afcdb1e768 301 Pfam PF01841 Transglutaminase-like superfamily 172 234 4.5E-6 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Pfam PF00378 Enoyl-CoA hydratase/isomerase 504 621 3.8E-9 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Gene3D G3DSA:3.40.50.720 3 202 1.5E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 201 299 2.3E-10 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 SUPERFAMILY SSF48179 199 317 2.81E-20 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Gene3D G3DSA:3.90.226.10 497 624 5.2E-22 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 SUPERFAMILY SSF52096 483 788 1.23E-32 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 SUPERFAMILY SSF51735 5 199 1.2E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 SUPERFAMILY SSF48179 356 454 2.21E-13 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 PANTHER PTHR23309 4 471 1.8E-111 T 23-04-2016 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 198 1.2E-44 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Gene3D G3DSA:1.10.1040.10 203 301 3.2E-15 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 PANTHER PTHR23309:SF2 4 471 1.8E-111 T 23-04-2016 NIAKO_RS36070 a74b78eae2f22da5523e786636afdac1 793 Gene3D G3DSA:1.10.1040.10 380 432 1.5E-6 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 PANTHER PTHR26402 3 209 9.1E-30 T 23-04-2016 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 SUPERFAMILY SSF46894 134 207 4.42E-22 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 SMART SM00421 144 201 4.1E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 Gene3D G3DSA:3.40.50.2300 2 151 4.8E-16 T 23-04-2016 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 SUPERFAMILY SSF52172 3 138 2.7E-14 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 Pfam PF00072 Response regulator receiver domain 2 113 9.5E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 Gene3D G3DSA:1.10.10.10 152 206 1.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 5.2E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05610 4fc9ae7aa28c85c08f02c5b10503a798 210 PANTHER PTHR26402:SF458 3 209 9.1E-30 T 23-04-2016 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 Hamap MF_00201 DNA repair protein RecO [recO]. 2 244 16.146 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 Gene3D G3DSA:2.40.50.140 1 70 4.5E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 132 1.1E-18 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 Pfam PF11967 Recombination protein O N terminal 1 79 2.6E-18 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 SUPERFAMILY SSF57863 86 226 2.07E-5 T 23-04-2016 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 Pfam PF02565 Recombination protein O C terminal 90 228 2.6E-8 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 PANTHER PTHR33991 2 130 8.6E-20 T 23-04-2016 NIAKO_RS28280 1b0a924e58858e75cd5d7bfaa245ca56 246 SUPERFAMILY SSF50249 1 80 1.4E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 Pfam PF13537 Glutamine amidotransferase domain 146 261 4.0E-6 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 SUPERFAMILY SSF56235 96 308 4.42E-32 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 SUPERFAMILY SSF56235 34 60 4.42E-32 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 SUPERFAMILY SSF53271 302 378 1.13E-18 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 SUPERFAMILY SSF53271 408 506 1.13E-18 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 Gene3D G3DSA:3.40.50.2020 433 510 1.4E-21 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 Gene3D G3DSA:3.40.50.2020 318 381 1.4E-21 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 PANTHER PTHR11907:SF0 112 506 1.3E-65 T 23-04-2016 NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 Gene3D G3DSA:3.60.20.10 8 57 2.3E-36 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 Gene3D G3DSA:3.60.20.10 94 289 2.3E-36 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS30000 88df66249b881f74f5ad249a126ded59 615 PANTHER PTHR11907 112 506 1.3E-65 T 23-04-2016 NIAKO_RS03895 b3f2cf0b81b1f1e9c759db28ad889581 149 PANTHER PTHR38588 2 144 1.4E-27 T 23-04-2016 NIAKO_RS03895 b3f2cf0b81b1f1e9c759db28ad889581 149 PANTHER PTHR38588:SF1 2 144 1.4E-27 T 23-04-2016 NIAKO_RS03895 b3f2cf0b81b1f1e9c759db28ad889581 149 Gene3D G3DSA:3.30.530.20 1 146 2.8E-39 T 23-04-2016 IPR023393 START-like domain NIAKO_RS03895 b3f2cf0b81b1f1e9c759db28ad889581 149 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 10 144 4.8E-25 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G NIAKO_RS03895 b3f2cf0b81b1f1e9c759db28ad889581 149 SUPERFAMILY SSF55961 1 144 2.28E-30 T 23-04-2016 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 Gene3D G3DSA:1.10.10.10 119 208 1.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 SMART SM00421 145 202 2.0E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 Pfam PF00072 Response regulator receiver domain 3 115 2.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 SUPERFAMILY SSF46894 138 208 2.38E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 Gene3D G3DSA:3.40.50.2300 1 118 4.6E-36 T 23-04-2016 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 PANTHER PTHR26402 1 208 4.4E-60 T 23-04-2016 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 PANTHER PTHR26402:SF458 1 208 4.4E-60 T 23-04-2016 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 SUPERFAMILY SSF52172 1 130 2.56E-34 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 9.5E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS05535 fe0dadad698bbcb7e9768e1caf9fcdef 208 SMART SM00448 1 114 8.3E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PANTHER PTHR22773:SF40 3 486 4.0E-140 T 23-04-2016 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 486 8.7E-128 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 Pfam PF00361 Proton-conducting membrane transporter 129 415 8.0E-60 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 240 264 2.7E-27 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 2.7E-27 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 2.7E-27 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 2.7E-27 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 2.7E-27 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35530 c2b5d1af88fb8cc08438c0cfa410d766 487 PANTHER PTHR22773 3 486 4.0E-140 T 23-04-2016 NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 PANTHER PTHR24220 3 215 8.9E-105 T 23-04-2016 NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 Pfam PF00005 ABC transporter 17 165 9.5E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 Gene3D G3DSA:3.40.50.300 1 216 4.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 SMART SM00382 26 214 4.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 PANTHER PTHR24220:SF111 3 215 8.9E-105 T 23-04-2016 NIAKO_RS26940 6663bb0d9a0eb2ea3d6f1eea0fbc91d0 217 SUPERFAMILY SSF52540 1 216 1.82E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 Gene3D G3DSA:3.40.50.300 1 215 1.3E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 SUPERFAMILY SSF52540 2 214 7.21E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 PANTHER PTHR24220 3 213 1.1E-62 T 23-04-2016 NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 SMART SM00382 26 212 7.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS06420 129531b91fbfb88a1abd03a6231b81f8 233 Pfam PF00005 ABC transporter 17 162 2.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 SUPERFAMILY SSF48452 327 415 2.13E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 SUPERFAMILY SSF48452 211 245 2.13E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 SUPERFAMILY SSF48452 103 277 3.16E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 SMART SM00028 211 244 10.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 SMART SM00028 384 417 10.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 Gene3D G3DSA:1.25.40.10 350 412 1.2E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 Gene3D G3DSA:1.25.40.10 106 277 2.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10085 764403082dc3e0fe5969d2cc87e8fdce 432 Pfam PF13174 Tetratricopeptide repeat 385 410 0.012 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13525 04b535b9cddd8e7198174b28d2a06b94 121 PANTHER PTHR38446:SF1 2 121 9.5E-35 T 23-04-2016 NIAKO_RS13525 04b535b9cddd8e7198174b28d2a06b94 121 Pfam PF06993 Protein of unknown function (DUF1304) 10 118 3.5E-42 T 23-04-2016 IPR009732 Protein of unknown function DUF1304 NIAKO_RS13525 04b535b9cddd8e7198174b28d2a06b94 121 PANTHER PTHR38446 2 121 9.5E-35 T 23-04-2016 NIAKO_RS15685 189d8763c913b3bd221441cc49442f08 137 PANTHER PTHR10067:SF5 6 126 3.0E-24 T 23-04-2016 NIAKO_RS15685 189d8763c913b3bd221441cc49442f08 137 PANTHER PTHR10067 6 126 3.0E-24 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NIAKO_RS15685 189d8763c913b3bd221441cc49442f08 137 Pfam PF02666 Phosphatidylserine decarboxylase 4 128 2.0E-24 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 Pfam PF07715 TonB-dependent Receptor Plug Domain 237 361 6.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 Gene3D G3DSA:2.60.40.1120 148 232 9.1E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF49464 146 227 3.53E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532:SF57 328 558 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532:SF57 147 310 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532:SF57 633 659 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532:SF57 691 1168 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF56935 1076 1170 1.14E-85 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF56935 433 521 1.14E-85 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF56935 561 908 1.14E-85 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF56935 993 1037 1.14E-85 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 SUPERFAMILY SSF56935 225 385 1.14E-85 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 147 1170 7.8E-242 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 Pfam PF13715 CarboxypepD_reg-like domain 148 229 1.2E-14 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532 328 558 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532 147 310 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532 633 659 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 PANTHER PTHR11532 691 1168 3.6E-227 T 23-04-2016 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 337 367 3.4E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13075 a6f8596d95ee4dfd3cbdd2d3fd6382b1 1170 Gene3D G3DSA:2.170.130.10 233 365 8.6E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34645 f181b8fd64d8c31b023b996801bfe99f 201 SUPERFAMILY SSF109854 24 187 1.61E-10 T 23-04-2016 NIAKO_RS34645 f181b8fd64d8c31b023b996801bfe99f 201 Pfam PF12867 DinB superfamily 24 179 9.4E-18 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS34645 f181b8fd64d8c31b023b996801bfe99f 201 Gene3D G3DSA:1.20.120.450 24 186 7.8E-14 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 SMART SM00331 20 248 5.1E-16 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 Gene3D G3DSA:3.60.40.10 7 247 4.4E-52 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 SUPERFAMILY SSF81606 8 247 6.67E-49 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 PANTHER PTHR13832 7 273 7.3E-44 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 SMART SM00332 1 246 7.2E-15 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 Pfam PF13672 Protein phosphatase 2C 16 218 3.6E-11 T 23-04-2016 NIAKO_RS23575 ab5b3ac303e57c9a74484afe47304da3 491 PANTHER PTHR13832:SF278 7 273 7.3E-44 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Gene3D G3DSA:3.30.470.30 61 167 7.5E-24 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 PANTHER PTHR10459 32 493 3.9E-50 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 SUPERFAMILY SSF56091 28 217 4.08E-46 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Gene3D G3DSA:2.40.50.140 219 345 1.8E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 PANTHER PTHR10459:SF70 32 493 3.9E-50 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 SUPERFAMILY SSF50249 220 344 5.14E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 38 344 7.3E-88 T 23-04-2016 IPR014146 DNA ligase D, ligase domain NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Pfam PF04679 ATP dependent DNA ligase C terminal region 235 338 2.6E-24 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 395 638 4.8E-69 T 23-04-2016 IPR014145 DNA ligase D, polymerase domain NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 50 661 1.8E-160 T 23-04-2016 IPR014143 DNA ligase D NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Pfam PF01068 ATP dependent DNA ligase domain 38 216 4.1E-35 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Gene3D G3DSA:3.30.1490.70 30 60 4.1E-23 T 23-04-2016 NIAKO_RS24115 963dca464c3f7a479f80f45ffc8930f8 684 Gene3D G3DSA:3.30.1490.70 173 216 4.1E-23 T 23-04-2016 NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 Gene3D G3DSA:3.40.50.1820 134 393 3.3E-74 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 Pfam PF00756 Putative esterase 163 386 1.5E-19 T 23-04-2016 IPR000801 Putative esterase NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 PANTHER PTHR10907:SF33 148 300 1.1E-30 T 23-04-2016 NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 SUPERFAMILY SSF53474 143 393 5.08E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 SUPERFAMILY SSF81296 56 104 1.59E-6 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 PANTHER PTHR10907 148 300 1.1E-30 T 23-04-2016 NIAKO_RS11980 25575a742fdf4daa9e1e0679d9297c6d 396 Gene3D G3DSA:2.60.40.10 54 117 9.3E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 Gene3D G3DSA:2.40.10.10 319 389 3.0E-6 T 23-04-2016 NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 Pfam PF00089 Trypsin 147 386 1.3E-5 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 151 165 - T 23-04-2016 IPR028301 Serine proteases, V8 family, histidine active site NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 SUPERFAMILY SSF50494 331 385 1.86E-18 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 SUPERFAMILY SSF50494 120 256 1.86E-18 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 Gene3D G3DSA:2.40.10.10 129 223 2.7E-12 T 23-04-2016 NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 PRINTS PR00839 V8 serine protease family signature 150 167 1.9E-7 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 NIAKO_RS37050 0b99f082b783d430e87e0c65390de7ed 394 PRINTS PR00839 V8 serine protease family signature 121 138 1.9E-7 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 SMART SM00382 45 231 1.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 Gene3D G3DSA:3.40.50.300 8 241 1.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 PANTHER PTHR24220:SF589 12 271 8.3E-72 T 23-04-2016 NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 SUPERFAMILY SSF52540 12 249 2.28E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 PANTHER PTHR24220 12 271 8.3E-72 T 23-04-2016 NIAKO_RS07615 4af52c2471d28bd23bd4ee99f5e64be1 272 Pfam PF00005 ABC transporter 43 176 5.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Pfam PF12796 Ankyrin repeats (3 copies) 159 251 1.4E-15 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Pfam PF12796 Ankyrin repeats (3 copies) 36 117 4.9E-13 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Gene3D G3DSA:1.25.40.20 30 101 8.4E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Gene3D G3DSA:1.25.40.20 102 167 1.5E-25 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Pfam PF00023 Ankyrin repeat 121 150 1.5E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 88 117 0.0075 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 187 216 0.74 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 55 84 0.016 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 21 51 1700.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 154 183 4.8E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 121 150 2.2E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SMART SM00248 220 249 9.4E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 SUPERFAMILY SSF48403 25 275 2.57E-68 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 PANTHER PTHR24198 26 275 1.5E-72 T 23-04-2016 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 PRINTS PR01415 Ankyrin repeat signature 203 217 2.0E-6 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 PRINTS PR01415 Ankyrin repeat signature 89 104 2.0E-6 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS00350 936b5104c16e0bf70897e2fdbd847c70 279 Gene3D G3DSA:1.25.40.20 168 275 5.0E-34 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 Gene3D G3DSA:3.40.50.720 2 205 3.6E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.304379E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.304379E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PANTHER PTHR24322 10 132 1.5E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PANTHER PTHR24322 148 178 1.5E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 Pfam PF00106 short chain dehydrogenase 7 186 4.8E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.23328E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.23328E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.23328E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.23328E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12320 d79e460c4192172f6bd4cc85bd1f5b98 240 SUPERFAMILY SSF51735 1 192 3.9E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SUPERFAMILY SSF55021 665 736 1.58E-7 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 PANTHER PTHR21262 13 739 2.1E-281 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SMART SM00954 256 371 9.6E-51 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Gene3D G3DSA:3.10.20.30 410 472 3.2E-21 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Gene3D G3DSA:3.30.70.260 663 734 4.0E-11 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 47 732 3.0E-192 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SUPERFAMILY SSF109604 26 211 3.45E-60 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SMART SM00471 62 174 4.8E-6 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Pfam PF13328 HD domain 47 196 1.2E-42 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 PANTHER PTHR21262:SF0 13 739 2.1E-281 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Pfam PF04607 Region found in RelA / SpoT proteins 256 370 1.3E-32 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Gene3D G3DSA:3.30.460.10 199 351 6.4E-42 T 23-04-2016 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SUPERFAMILY SSF81271 398 471 3.92E-19 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Pfam PF02824 TGS domain 411 470 8.3E-20 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 Pfam PF13291 ACT domain 661 736 1.9E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NIAKO_RS27585 c87ca2dce3d1ba29223a18900e4f9906 742 SUPERFAMILY SSF81301 201 415 6.05E-54 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 1729 1890 9.9E-46 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 2786 2944 4.6E-33 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 3835 3992 3.2E-35 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 4875 5036 5.7E-45 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 685 846 1.5E-41 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF56801 3645 4202 5.49E-144 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00455 Putative AMP-binding domain signature. 676 687 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2780 2791 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1720 1731 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3829 3840 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4866 4877 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 4454 4700 1.67E-55 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.30.300.30 4075 4190 6.3E-35 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.30.300.30 3027 3142 1.0E-36 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.30.300.30 5119 5235 2.3E-41 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.30.300.30 1973 2089 2.5E-39 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.30.300.30 929 1045 5.1E-39 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 4269 4466 2.52E-45 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00550 Phosphopantetheine attachment site 1045 1110 6.5E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00550 Phosphopantetheine attachment site 4191 4250 8.2E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00550 Phosphopantetheine attachment site 5234 5297 1.6E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00550 Phosphopantetheine attachment site 3143 3202 3.4E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00550 Phosphopantetheine attachment site 2088 2154 1.5E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF47336 2079 2186 1.05E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 3221 3418 3.78E-45 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3708 4104 3.5E-125 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1612 2002 7.9E-123 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 568 958 4.6E-119 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2659 3056 1.8E-119 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4758 5148 1.1E-122 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF47336 4181 4256 1.44E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF56801 4695 5246 3.53E-157 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF56801 505 1056 6.67E-159 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF47336 3133 3208 3.31E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 2357 2623 7.0E-53 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 2176 2349 5.45E-44 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 PANTHER PTHR24095 707 2145 0.0 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 PANTHER PTHR24095 4222 5205 0.0 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1069 1084 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4215 4230 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5259 5274 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3167 3182 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SMART SM00823 Phosphopantetheine attachment site 2087 2158 7.8E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SMART SM00823 Phosphopantetheine attachment site 4189 4260 0.17 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SMART SM00823 Phosphopantetheine attachment site 5233 5286 0.35 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SMART SM00823 Phosphopantetheine attachment site 3141 3212 0.19 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 259 534 7.45E-43 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 76 250 3.34E-42 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 2631 2785 1.5E-50 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 3680 3834 1.5E-50 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00668 Condensation domain 4273 4564 6.0E-83 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00668 Condensation domain 71 369 1.7E-66 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00668 Condensation domain 1128 1418 3.1E-82 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00668 Condensation domain 2171 2467 4.3E-80 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00668 Condensation domain 3225 3516 7.8E-81 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00501 AMP-binding enzyme 4737 5124 1.1E-89 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00501 AMP-binding enzyme 1591 1978 2.1E-90 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00501 AMP-binding enzyme 547 934 7.0E-95 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00501 AMP-binding enzyme 2638 3032 7.3E-86 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF00501 AMP-binding enzyme 3687 4079 1.3E-90 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:2.30.38.10 2945 3021 9.6E-26 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:2.30.38.10 847 923 1.2E-27 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:2.30.38.10 5037 5113 2.9E-23 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:2.30.38.10 1891 1967 2.9E-23 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:2.30.38.10 3993 4070 1.7E-27 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF47336 5225 5297 3.27E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 1132 1300 4.82E-45 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF47336 1036 1142 4.45E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 PANTHER PTHR24095:SF137 707 2145 0.0 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 PANTHER PTHR24095:SF137 4222 5205 0.0 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13193 AMP-binding enzyme C-terminal domain 942 1015 9.1E-9 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13193 AMP-binding enzyme C-terminal domain 5132 5205 6.5E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13193 AMP-binding enzyme C-terminal domain 1986 2059 2.5E-7 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 4730 4874 4.5E-49 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 539 684 3.6E-48 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:3.40.50.980 1584 1728 4.5E-49 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 1308 1554 1.06E-54 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF56801 1549 2099 1.83E-156 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:1.10.1200.10 5236 5300 5.9E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:1.10.1200.10 1046 1115 2.3E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:1.10.1200.10 4191 4258 4.2E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:1.10.1200.10 3143 3210 9.0E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Gene3D G3DSA:1.10.1200.10 2090 2156 1.6E-25 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13745 HxxPF-repeated domain 393 493 6.5E-11 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13745 HxxPF-repeated domain 4588 4683 1.4E-20 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13745 HxxPF-repeated domain 1442 1537 1.4E-20 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13745 HxxPF-repeated domain 2491 2583 3.5E-20 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 Pfam PF13745 HxxPF-repeated domain 3540 3632 3.5E-20 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF52777 3406 3672 4.11E-53 T 23-04-2016 NIAKO_RS11525 2da3a89a84fdcd25055b3f34b3e60b68 5321 SUPERFAMILY SSF56801 2596 3154 7.59E-143 T 23-04-2016 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Pfam PF00158 Sigma-54 interaction domain 167 333 1.6E-60 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Gene3D G3DSA:1.10.10.60 474 511 2.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 SMART SM00382 187 330 1.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Pfam PF00072 Response regulator receiver domain 4 113 4.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Pfam PF02954 Bacterial regulatory protein, Fis family 474 512 4.4E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Gene3D G3DSA:3.40.50.2300 1 120 4.7E-35 T 23-04-2016 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Gene3D G3DSA:3.40.50.300 166 338 7.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 Gene3D G3DSA:1.10.8.60 340 412 3.7E-21 T 23-04-2016 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 SUPERFAMILY SSF46689 467 512 1.21E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 253 268 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 191 204 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 SMART SM00448 2 113 1.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 SUPERFAMILY SSF52540 167 409 2.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 PANTHER PTHR32071 3 418 1.5E-174 T 23-04-2016 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 PANTHER PTHR32071 436 512 1.5E-174 T 23-04-2016 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 495 515 1.8E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 478 495 1.8E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS28720 122bd39fe0334a7a18e56bcb650fe203 518 SUPERFAMILY SSF52172 1 211 1.07E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 PANTHER PTHR10617 7 347 1.2E-29 T 23-04-2016 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 PANTHER PTHR10617:SF101 7 347 1.2E-29 T 23-04-2016 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 Gene3D G3DSA:3.50.50.60 6 163 3.4E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 Gene3D G3DSA:3.50.50.60 271 308 3.4E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 SUPERFAMILY SSF51905 269 373 6.08E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 SUPERFAMILY SSF51905 6 160 6.08E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 4.7E-6 T 23-04-2016 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 4.7E-6 T 23-04-2016 NIAKO_RS27210 51774421ff4d92b8ebc8e6b1d71e252c 379 Pfam PF00890 FAD binding domain 8 39 5.0E-6 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIAKO_RS19680 3156e788863c69e4883049cce2bf22d4 228 Gene3D G3DSA:2.30.180.10 44 218 4.2E-7 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS19680 3156e788863c69e4883049cce2bf22d4 228 SUPERFAMILY SSF82153 44 222 4.84E-8 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 SUPERFAMILY SSF53448 336 587 4.76E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 Gene3D G3DSA:3.40.50.720 17 198 3.7E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 249 1.2E-40 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 Gene3D G3DSA:3.90.550.10 338 467 1.3E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 PANTHER PTHR10859 320 635 1.7E-103 T 23-04-2016 NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 SUPERFAMILY SSF51735 17 324 9.18E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 Pfam PF00535 Glycosyl transferase family 2 341 502 1.8E-28 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 PANTHER PTHR10859:SF86 320 635 1.7E-103 T 23-04-2016 NIAKO_RS27360 464c3a12ccfad5e2369fc4a15f0abc36 646 Gene3D G3DSA:3.90.25.10 199 337 7.7E-21 T 23-04-2016 NIAKO_RS06950 15eaa7de5e9802b8cc9a2926b97bce10 317 Pfam PF03631 Virulence factor BrkB 20 276 1.5E-55 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS06950 15eaa7de5e9802b8cc9a2926b97bce10 317 PIRSF PIRSF035875 1 294 1.3E-67 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS06950 15eaa7de5e9802b8cc9a2926b97bce10 317 PANTHER PTHR30213:SF1 3 289 1.7E-62 T 23-04-2016 NIAKO_RS06950 15eaa7de5e9802b8cc9a2926b97bce10 317 PANTHER PTHR30213 3 289 1.7E-62 T 23-04-2016 NIAKO_RS06950 15eaa7de5e9802b8cc9a2926b97bce10 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 14 273 3.8E-30 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS02290 af26937158f0ed22fb1e13c4b0aedee7 152 Pfam PF06841 T4-like virus tail tube protein gp19 12 149 1.2E-46 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 NIAKO_RS02290 af26937158f0ed22fb1e13c4b0aedee7 152 PANTHER PTHR38009:SF1 6 152 8.6E-18 T 23-04-2016 NIAKO_RS02290 af26937158f0ed22fb1e13c4b0aedee7 152 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 8 149 2.8E-41 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 NIAKO_RS02290 af26937158f0ed22fb1e13c4b0aedee7 152 PANTHER PTHR38009 6 152 8.6E-18 T 23-04-2016 NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 SUPERFAMILY SSF52540 91 329 1.27E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 PANTHER PTHR23264 1 356 9.4E-154 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 346 36.576 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 Gene3D G3DSA:3.40.50.300 90 343 2.4E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 PANTHER PTHR23264:SF19 1 356 9.4E-154 T 23-04-2016 NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 SUPERFAMILY SSF117916 2 84 8.83E-20 T 23-04-2016 NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 Pfam PF01883 Domain of unknown function DUF59 4 70 3.6E-20 T 23-04-2016 IPR002744 Domain of unknown function DUF59 NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 ProSitePatterns PS01215 Mrp family signature. 207 223 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 NIAKO_RS22375 b6e28305f2f78a4b7895e64789dea358 366 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 343 2.4E-98 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 Gene3D G3DSA:3.30.70.920 59 143 1.4E-28 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.2E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.2E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.2E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 6.9E-17 T 23-04-2016 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 PANTHER PTHR30154:SF28 1 155 3.8E-56 T 23-04-2016 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 SMART SM00344 6 115 4.5E-40 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 SUPERFAMILY SSF54909 68 155 3.89E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 1.9E-23 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 PANTHER PTHR30154 1 155 3.8E-56 T 23-04-2016 NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 SUPERFAMILY SSF46785 5 96 5.75E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20540 2fd6a6987507bb7bf75428415674d3e1 155 Gene3D G3DSA:1.10.10.10 1 57 1.8E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 PIRSF PIRSF005572 5 379 1.4E-105 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 Gene3D G3DSA:3.90.1150.10 254 377 2.9E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 SUPERFAMILY SSF53383 7 378 1.73E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 Pfam PF00266 Aminotransferase class-V 8 369 2.3E-74 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 Gene3D G3DSA:3.40.640.10 20 253 8.9E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 PANTHER PTHR11601:SF20 3 379 2.0E-130 T 23-04-2016 NIAKO_RS21775 1d0ca26fe85d477c1860e2ff1848f640 379 PANTHER PTHR11601 3 379 2.0E-130 T 23-04-2016 NIAKO_RS31205 d322a78b59bd6b13550665e290887bd0 158 PANTHER PTHR21021 1 157 3.8E-51 T 23-04-2016 NIAKO_RS31205 d322a78b59bd6b13550665e290887bd0 158 SMART SM00065 32 158 0.0017 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS31205 d322a78b59bd6b13550665e290887bd0 158 SUPERFAMILY SSF55781 11 155 4.14E-42 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS31205 d322a78b59bd6b13550665e290887bd0 158 Pfam PF13185 GAF domain 37 155 6.3E-14 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS31205 d322a78b59bd6b13550665e290887bd0 158 Gene3D G3DSA:3.30.450.40 11 155 7.4E-51 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 Pfam PF00171 Aldehyde dehydrogenase family 57 508 4.2E-95 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 PANTHER PTHR11699:SF69 13 544 2.2E-223 T 23-04-2016 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 PANTHER PTHR11699 13 544 2.2E-223 T 23-04-2016 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 Gene3D G3DSA:3.40.309.10 303 489 5.2E-44 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 Gene3D G3DSA:3.40.605.10 36 302 5.1E-57 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 316 327 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS14275 5eecdf74743b4208025701ab04189514 544 SUPERFAMILY SSF53720 26 509 1.96E-101 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 Gene3D G3DSA:1.10.10.10 153 210 3.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 SMART SM00421 148 205 2.2E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 SUPERFAMILY SSF46894 138 210 1.7E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 PANTHER PTHR26402:SF151 3 207 4.1E-54 T 23-04-2016 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 SUPERFAMILY SSF52172 2 131 2.99E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 Gene3D G3DSA:3.40.50.2300 2 152 6.4E-33 T 23-04-2016 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 SMART SM00448 3 116 4.9E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 Pfam PF00072 Response regulator receiver domain 5 116 2.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 4.5E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 PANTHER PTHR26402 3 207 4.1E-54 T 23-04-2016 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.75E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.75E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03360 03473ecd5b01333fd209e651aad48a85 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.75E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS14330 71a1883d5cf6a642109d07bf0c61300e 150 PANTHER PTHR36929 1 149 1.3E-22 T 23-04-2016 NIAKO_RS14330 71a1883d5cf6a642109d07bf0c61300e 150 Gene3D G3DSA:3.30.530.20 2 144 1.7E-36 T 23-04-2016 IPR023393 START-like domain NIAKO_RS14330 71a1883d5cf6a642109d07bf0c61300e 150 SUPERFAMILY SSF55961 2 144 2.09E-38 T 23-04-2016 NIAKO_RS14330 71a1883d5cf6a642109d07bf0c61300e 150 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 142 6.9E-26 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS14330 71a1883d5cf6a642109d07bf0c61300e 150 PANTHER PTHR36929:SF1 1 149 1.3E-22 T 23-04-2016 NIAKO_RS26540 51ada24865398d88e4ba7adb3a3bd519 127 Pfam PF00717 Peptidase S24-like 32 99 8.1E-11 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS26540 51ada24865398d88e4ba7adb3a3bd519 127 PANTHER PTHR33516:SF1 1 119 3.4E-39 T 23-04-2016 NIAKO_RS26540 51ada24865398d88e4ba7adb3a3bd519 127 Gene3D G3DSA:2.10.109.10 2 116 3.1E-40 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS26540 51ada24865398d88e4ba7adb3a3bd519 127 SUPERFAMILY SSF51306 1 113 1.14E-28 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS26540 51ada24865398d88e4ba7adb3a3bd519 127 PANTHER PTHR33516 1 119 3.4E-39 T 23-04-2016 NIAKO_RS24105 d3ca577e3469c7ad4f88d742ac928eb6 538 Pfam PF00999 Sodium/hydrogen exchanger family 11 408 3.4E-60 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS24105 d3ca577e3469c7ad4f88d742ac928eb6 538 PANTHER PTHR10110 4 526 9.2E-92 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 NIAKO_RS24105 d3ca577e3469c7ad4f88d742ac928eb6 538 PANTHER PTHR10110:SF86 4 526 9.2E-92 T 23-04-2016 NIAKO_RS24105 d3ca577e3469c7ad4f88d742ac928eb6 538 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 528 2.4E-101 T 23-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 8.8E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 8.8E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 8.8E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 8.8E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 Pfam PF00106 short chain dehydrogenase 3 185 7.8E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 SUPERFAMILY SSF51735 2 238 5.07E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PANTHER PTHR24322 6 128 3.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 PANTHER PTHR24322 144 175 3.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS04300 529e0537a81eb6030603912421374daa 265 Gene3D G3DSA:3.40.50.720 3 240 2.2E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF52777 1054 1216 5.89E-38 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF13745 HxxPF-repeated domain 1357 1441 7.7E-20 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1516 1921 2.2E-126 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 881 2.3E-125 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.40.50.980 609 769 1.3E-46 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.40.50.980 1647 1808 1.4E-44 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.40.50.980 464 608 3.0E-50 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.40.50.980 1489 1646 7.5E-52 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:1.10.1200.10 972 1035 1.4E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:1.10.1200.10 2010 2072 2.1E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF47336 959 1033 3.27E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:2.30.38.10 1809 1887 1.2E-25 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:2.30.38.10 770 847 1.2E-26 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 PANTHER PTHR24095 372 1978 0.0 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 PANTHER PTHR24095 2 353 0.0 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF52777 182 457 2.08E-49 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 PANTHER PTHR24095:SF173 372 1978 0.0 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 PANTHER PTHR24095:SF173 2 353 0.0 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF56801 1456 2019 2.22E-152 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2030 2045 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00501 AMP-binding enzyme 471 857 3.5E-94 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00501 AMP-binding enzyme 1495 1897 1.9E-91 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF56801 429 979 1.96E-152 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.30.300.30 852 971 4.5E-36 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Gene3D G3DSA:3.30.300.30 1892 2009 4.7E-38 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF52777 1222 1458 3.45E-48 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00668 Condensation domain 3 299 2.1E-73 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00668 Condensation domain 1049 1334 4.3E-62 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF13193 AMP-binding enzyme C-terminal domain 1908 1978 2.0E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF13193 AMP-binding enzyme C-terminal domain 865 939 9.5E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF52777 8 181 8.67E-41 T 23-04-2016 NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1638 1649 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 SUPERFAMILY SSF47336 1999 2071 5.5E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00550 Phosphopantetheine attachment site 2008 2071 2.0E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11540 ee0d7ac566070516755fde4f28dba4bb 2092 Pfam PF00550 Phosphopantetheine attachment site 968 1032 2.2E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 7 274 2.5E-107 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 123 137 4.4E-34 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 157 175 4.4E-34 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 223 234 4.4E-34 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 194 211 4.4E-34 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 245 254 4.4E-34 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 Gene3D G3DSA:3.90.226.10 12 273 6.8E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 SUPERFAMILY SSF52096 19 273 6.04E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PANTHER PTHR22855 5 275 1.2E-118 T 23-04-2016 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 PANTHER PTHR22855:SF17 5 275 1.2E-118 T 23-04-2016 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 Pfam PF01039 Carboxyl transferase domain 97 233 2.4E-14 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS04355 4dba209fd68e4fb3fdfd0816e4f16e4f 275 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 275 35.413 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS07795 a0efb7694e7b666516a3c749f1773bef 172 PANTHER PTHR23091 1 172 8.9E-37 T 23-04-2016 NIAKO_RS07795 a0efb7694e7b666516a3c749f1773bef 172 Pfam PF13673 Acetyltransferase (GNAT) domain 30 153 2.1E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS07795 a0efb7694e7b666516a3c749f1773bef 172 PANTHER PTHR23091:SF258 1 172 8.9E-37 T 23-04-2016 NIAKO_RS07795 a0efb7694e7b666516a3c749f1773bef 172 Gene3D G3DSA:3.40.630.30 3 163 8.2E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS07795 a0efb7694e7b666516a3c749f1773bef 172 SUPERFAMILY SSF55729 1 165 1.18E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 SUPERFAMILY SSF52317 401 612 7.33E-28 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 Pfam PF02449 Beta-galactosidase 28 393 2.9E-68 T 23-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 Pfam PF08532 Beta-galactosidase trimerisation domain 403 612 2.4E-33 T 23-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 SUPERFAMILY SSF51445 25 393 4.5E-62 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 Gene3D G3DSA:3.40.50.880 402 613 1.2E-26 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 Gene3D G3DSA:3.20.20.80 24 394 7.7E-78 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 PANTHER PTHR36447:SF1 17 677 3.6E-91 T 23-04-2016 NIAKO_RS11705 7df959a76a0e38f1c9ed5aeb4e7c32b7 677 PANTHER PTHR36447 17 677 3.6E-91 T 23-04-2016 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 PANTHER PTHR11808:SF15 1 378 2.3E-198 T 23-04-2016 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 378 2.8E-156 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 Gene3D G3DSA:3.90.1150.10 244 378 6.4E-54 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 PIRSF PIRSF001434 1 379 8.2E-149 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 SUPERFAMILY SSF53383 4 378 9.79E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 Gene3D G3DSA:3.40.640.10 2 243 4.1E-96 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS32325 4ea5d4772e963fe2178106a03dc29d1d 379 PANTHER PTHR11808 1 378 2.3E-198 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 203 1.0E-55 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 204 20.264 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 195 5.7E-54 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 SMART SM01207 8 196 9.3E-80 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 PANTHER PTHR30309:SF0 1 218 1.1E-69 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NIAKO_RS12970 2db6e724833e05b29ca621d3be302086 219 PANTHER PTHR30309 1 218 1.1E-69 T 23-04-2016 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Pfam PF00158 Sigma-54 interaction domain 201 367 3.7E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 PANTHER PTHR32071 200 506 3.5E-153 T 23-04-2016 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Gene3D G3DSA:1.10.8.60 374 448 1.8E-24 T 23-04-2016 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Gene3D G3DSA:1.10.10.60 449 504 2.7E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Gene3D G3DSA:3.40.50.300 200 373 3.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 225 238 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 SMART SM00382 221 365 4.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 SUPERFAMILY SSF55781 12 177 4.61E-5 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 SUPERFAMILY SSF46689 414 503 1.61E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Gene3D G3DSA:3.30.450.40 10 176 3.3E-6 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 SUPERFAMILY SSF52540 201 443 4.56E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 414 423 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS08550 38630609d2e8e337cee69ea9d97c37b7 508 Pfam PF02954 Bacterial regulatory protein, Fis family 457 501 5.1E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 507 1.1E-209 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 507 47.101 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Gene3D G3DSA:3.40.720.10 312 506 9.8E-85 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Gene3D G3DSA:3.40.720.10 4 77 9.8E-85 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 SUPERFAMILY SSF53649 312 506 1.57E-71 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 SUPERFAMILY SSF53649 4 77 1.57E-71 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 296 1.2E-87 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 PANTHER PTHR31637 3 507 1.8E-257 T 23-04-2016 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 PANTHER PTHR31637:SF0 3 507 1.8E-257 T 23-04-2016 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Gene3D G3DSA:3.40.1450.10 78 308 1.4E-96 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 SUPERFAMILY SSF64158 77 304 2.22E-84 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 Pfam PF01676 Metalloenzyme superfamily 5 495 2.2E-71 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 NIAKO_RS33790 2442c79426418f6417a8e7c36e8654f3 507 PIRSF PIRSF001492 1 507 5.5E-206 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 18 152 2.2E-21 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 PANTHER PTHR30417:SF1 15 144 4.7E-26 T 23-04-2016 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 Gene3D G3DSA:3.40.80.10 4 166 4.9E-37 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 PANTHER PTHR30417 15 144 4.7E-26 T 23-04-2016 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 SUPERFAMILY SSF55846 3 166 5.89E-40 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS10355 b221548342ea9fac8e571f2e5042bfb1 245 SMART SM00644 8 152 1.1E-22 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS31890 5d19a9ff3c85c405f1eb2752407b4c62 193 PANTHER PTHR37692 1 193 8.8E-35 T 23-04-2016 NIAKO_RS31890 5d19a9ff3c85c405f1eb2752407b4c62 193 ProSitePatterns PS00018 EF-hand calcium-binding domain. 109 121 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS31890 5d19a9ff3c85c405f1eb2752407b4c62 193 Pfam PF04238 Protein of unknown function (DUF420) 48 189 7.0E-42 T 23-04-2016 IPR007352 Protein of unknown function DUF420 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 176 7.5E-12 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 PANTHER PTHR30173:SF20 1 199 3.6E-15 T 23-04-2016 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 PANTHER PTHR30173 1 199 3.6E-15 T 23-04-2016 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 Gene3D G3DSA:1.10.1740.10 1 108 1.4E-12 T 23-04-2016 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 Gene3D G3DSA:1.10.10.10 131 175 1.5E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 SUPERFAMILY SSF88946 1 87 2.86E-11 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS07145 12a43724deb5e730f04c5963002cdd2b 199 SUPERFAMILY SSF88659 130 177 7.29E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15505 13495d3fb3f78de9bdfb77382a75a6f5 153 Gene3D G3DSA:3.10.450.50 30 146 1.9E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS15505 13495d3fb3f78de9bdfb77382a75a6f5 153 SUPERFAMILY SSF54427 21 147 1.31E-15 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS15505 13495d3fb3f78de9bdfb77382a75a6f5 153 Pfam PF14534 Domain of unknown function (DUF4440) 33 141 3.3E-7 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 NIAKO_RS20260 c9bb7fddc62782b09e8670edafebe6b5 193 Gene3D G3DSA:2.60.120.10 1 151 7.8E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS20260 c9bb7fddc62782b09e8670edafebe6b5 193 PANTHER PTHR24567 11 193 1.3E-16 T 23-04-2016 NIAKO_RS20260 c9bb7fddc62782b09e8670edafebe6b5 193 SUPERFAMILY SSF51206 3 121 6.02E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS20260 c9bb7fddc62782b09e8670edafebe6b5 193 Pfam PF00027 Cyclic nucleotide-binding domain 29 115 2.2E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS20260 c9bb7fddc62782b09e8670edafebe6b5 193 PANTHER PTHR24567:SF33 11 193 1.3E-16 T 23-04-2016 NIAKO_RS27855 c0e883e79fe21ba0d27dc68701a47d90 213 SMART SM00849 13 195 1.6E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS27855 c0e883e79fe21ba0d27dc68701a47d90 213 PANTHER PTHR11935 15 212 1.3E-58 T 23-04-2016 NIAKO_RS27855 c0e883e79fe21ba0d27dc68701a47d90 213 Gene3D G3DSA:3.60.15.10 11 212 8.8E-52 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS27855 c0e883e79fe21ba0d27dc68701a47d90 213 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 1.2E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS27855 c0e883e79fe21ba0d27dc68701a47d90 213 SUPERFAMILY SSF56281 13 212 5.69E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF63829 143 348 1.48E-10 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:2.120.10.30 524 591 1.5E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SMART SM00342 1289 1372 7.1E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SMART SM00387 971 1087 5.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SMART SM00448 1127 1239 1.2E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF55874 914 1085 1.31E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:1.10.287.130 851 911 2.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SMART SM00388 860 925 5.9E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF52172 1127 1253 9.11E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:1.10.10.60 1325 1373 2.5E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF00072 Response regulator receiver domain 1129 1239 5.5E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1071 1084 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1030 1040 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1012 1026 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1047 1065 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:2.120.10.30 432 523 3.7E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:2.120.10.30 284 413 3.4E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07495 Y_Y_Y domain 743 805 6.1E-18 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423 371 451 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423 1126 1281 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423 803 1098 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423 302 321 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423 30 113 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1326 1368 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF63829 332 550 2.62E-14 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF47384 850 925 8.83E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:3.30.565.10 912 1087 2.1E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF46689 1325 1374 3.18E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 860 923 1.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07494 Two component regulator propeller 511 531 6.3E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07494 Two component regulator propeller 43 64 4.1E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07494 Two component regulator propeller 463 484 2.5E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07494 Two component regulator propeller 554 575 0.0024 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF07494 Two component regulator propeller 369 392 0.0028 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 SUPERFAMILY SSF63829 536 625 1.44E-5 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Gene3D G3DSA:3.40.50.2300 1127 1254 7.5E-42 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423:SF487 371 451 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423:SF487 1126 1281 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423:SF487 803 1098 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423:SF487 302 321 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 PANTHER PTHR24423:SF487 30 113 7.1E-135 T 23-04-2016 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF12833 Helix-turn-helix domain 1295 1372 3.5E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13470 d6f0eb64792cd46b216019fb3c36a75b 1380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 972 1086 3.8E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16000 9b1c89f5d520f26865efeb4793b27012 179 SUPERFAMILY SSF55729 7 157 7.93E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS16000 9b1c89f5d520f26865efeb4793b27012 179 PANTHER PTHR13256 10 160 1.3E-36 T 23-04-2016 NIAKO_RS16000 9b1c89f5d520f26865efeb4793b27012 179 Gene3D G3DSA:3.40.630.30 6 176 9.0E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS16000 9b1c89f5d520f26865efeb4793b27012 179 Pfam PF13302 Acetyltransferase (GNAT) domain 16 156 1.0E-26 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS16000 9b1c89f5d520f26865efeb4793b27012 179 PANTHER PTHR13256:SF10 10 160 1.3E-36 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 PANTHER PTHR23501 1 505 8.8E-140 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 Gene3D G3DSA:1.20.1250.20 478 504 3.0E-8 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 Gene3D G3DSA:1.20.1250.20 260 418 3.0E-8 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 Gene3D G3DSA:1.20.1250.20 6 194 1.0E-32 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 Pfam PF07690 Major Facilitator Superfamily 13 407 2.2E-54 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 SUPERFAMILY SSF103473 4 195 1.09E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 SUPERFAMILY SSF103473 477 504 1.09E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 SUPERFAMILY SSF103473 245 417 1.09E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 7.5E-6 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 7.5E-6 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 7.5E-6 T 23-04-2016 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 499 1.5E-124 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NIAKO_RS14340 f4858d6da000321351165a6316144c95 515 PANTHER PTHR23501:SF69 1 505 8.8E-140 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 SMART SM00420 6 58 6.7E-18 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 SMART SM01134 74 235 3.0E-68 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 Gene3D G3DSA:1.10.10.10 4 61 9.6E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 PANTHER PTHR30363:SF1 1 254 5.9E-83 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 Pfam PF00455 DeoR C terminal sensor domain 76 233 4.9E-51 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.6E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.6E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 Gene3D G3DSA:3.40.50.1360 76 217 3.3E-13 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 PANTHER PTHR30363 1 254 5.9E-83 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 SUPERFAMILY SSF100950 76 236 2.05E-28 T 23-04-2016 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 2.6E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS00290 1644d4b46b5305badf726f95ebaa4a5d 255 SUPERFAMILY SSF46785 4 66 5.17E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Pfam PF14522 Cytochrome c7 and related cytochrome c 331 426 2.5E-9 T 23-04-2016 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 PANTHER PTHR39425 184 280 2.3E-37 T 23-04-2016 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 PANTHER PTHR39425 306 375 2.3E-37 T 23-04-2016 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Gene3D G3DSA:3.90.10.10 224 276 3.7E-7 T 23-04-2016 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Gene3D G3DSA:1.10.760.10 29 121 6.5E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Pfam PF00034 Cytochrome c 29 117 5.3E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 SUPERFAMILY SSF46626 12 123 3.58E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 SUPERFAMILY SSF48695 222 380 5.63E-31 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Gene3D G3DSA:3.90.10.10 321 376 9.1E-12 T 23-04-2016 NIAKO_RS31825 214a4124ff5b77e0959eb2e73dbd3985 426 Gene3D G3DSA:3.90.10.10 414 425 9.1E-12 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 Gene3D G3DSA:2.40.50.100 56 86 1.6E-16 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 Gene3D G3DSA:2.40.50.100 217 250 1.6E-16 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 Pfam PF13533 Biotin-lipoyl like 59 101 3.0E-11 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 Pfam PF13437 HlyD family secretion protein 219 340 1.6E-12 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 PANTHER PTHR30386 16 345 1.8E-71 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 PANTHER PTHR30386:SF7 16 345 1.8E-71 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 SUPERFAMILY SSF111369 196 289 1.44E-8 T 23-04-2016 NIAKO_RS07185 1e4e7c66462c1f2b0ba2a9d64ba81fce 354 SUPERFAMILY SSF111369 55 143 1.96E-8 T 23-04-2016 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 SUPERFAMILY SSF46689 243 288 8.51E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 Pfam PF12833 Helix-turn-helix domain 209 287 5.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 PANTHER PTHR11019:SF45 40 287 4.8E-42 T 23-04-2016 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 PANTHER PTHR11019 40 287 4.8E-42 T 23-04-2016 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 SUPERFAMILY SSF51215 37 170 3.79E-15 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 Pfam PF02311 AraC-like ligand binding domain 31 147 6.6E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 Gene3D G3DSA:1.10.10.60 243 288 4.5E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 Gene3D G3DSA:2.60.120.280 37 171 6.1E-14 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16565 5fdbee1c344894d88282e1bd4e911c05 289 SMART SM00342 202 286 2.5E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Gene3D G3DSA:2.130.10.130 685 926 4.2E-25 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Gene3D G3DSA:2.130.10.130 478 536 5.1E-40 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Gene3D G3DSA:2.130.10.130 55 130 1.1E-9 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Gene3D G3DSA:2.130.10.130 131 443 5.1E-40 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 739 810 1.2E-11 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 860 922 2.1E-10 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 479 523 1.7E-7 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 75 138 8.8E-14 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 264 326 7.0E-13 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 PANTHER PTHR16026 467 625 7.9E-33 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 PANTHER PTHR16026 67 338 7.9E-33 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 PANTHER PTHR16026 389 451 7.9E-33 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 SUPERFAMILY SSF69318 667 929 1.57E-59 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 SUPERFAMILY SSF69318 401 546 1.57E-59 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 SUPERFAMILY SSF69318 473 535 1.22E-71 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 SUPERFAMILY SSF69318 1006 1106 3.79E-6 T 23-04-2016 NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 Pfam PF07593 ASPIC and UnbV 559 625 4.2E-22 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS13165 3ee3182d8dad99d4e902597784d58633 1132 SUPERFAMILY SSF69318 57 439 1.22E-71 T 23-04-2016 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 Gene3D G3DSA:1.10.10.60 256 303 1.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 Pfam PF12833 Helix-turn-helix domain 224 302 1.7E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 SUPERFAMILY SSF46689 256 304 1.03E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 PANTHER PTHR11019:SF50 31 304 1.6E-31 T 23-04-2016 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 PANTHER PTHR11019 31 304 1.6E-31 T 23-04-2016 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 SMART SM00342 218 301 1.5E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25380 3cb9524895ed92afea1303b787d0e1a7 305 SUPERFAMILY SSF51215 55 177 6.41E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS32780 6a07d4d87fb69cd044162a9858f28353 120 Gene3D G3DSA:1.25.40.10 25 89 2.7E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32780 6a07d4d87fb69cd044162a9858f28353 120 SUPERFAMILY SSF48452 8 90 8.98E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32780 6a07d4d87fb69cd044162a9858f28353 120 Pfam PF07980 SusD family 8 60 1.2E-4 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 SMART SM00028 16 49 0.27 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 SMART SM00028 50 83 37.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 SMART SM00028 87 120 4.5E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 Pfam PF13432 Tetratricopeptide repeat 23 79 6.7E-10 T 23-04-2016 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 SUPERFAMILY SSF48452 21 144 6.78E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 Gene3D G3DSA:1.25.40.10 19 153 4.5E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 Pfam PF00515 Tetratricopeptide repeat 88 120 1.4E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS32915 da14f3273ae49b7af163ff10a2bd38d8 199 PANTHER PTHR23083 26 142 2.5E-15 T 23-04-2016 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 23-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 Pfam PF01175 Urocanase 14 547 1.1E-253 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 PANTHER PTHR12216 16 545 0.0 T 23-04-2016 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 SUPERFAMILY SSF111326 10 552 1.7E-245 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 Gene3D G3DSA:3.40.1770.10 11 142 6.6E-151 T 23-04-2016 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 Gene3D G3DSA:3.40.1770.10 361 551 6.6E-151 T 23-04-2016 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 Hamap MF_00577 Urocanate hydratase [hutU]. 6 555 48.969 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 PIRSF PIRSF001423 2 558 9.6E-277 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 13 553 2.2E-281 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 PANTHER PTHR12216:SF3 16 545 0.0 T 23-04-2016 NIAKO_RS10840 0fe709ad897eb1075e9e0f8f3ae6272b 559 Gene3D G3DSA:3.40.50.10730 143 350 1.5E-83 T 23-04-2016 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Gene3D G3DSA:1.25.40.10 227 274 2.1E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Gene3D G3DSA:1.25.40.10 313 353 2.1E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SUPERFAMILY SSF48452 88 270 5.46E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Pfam PF12770 CHAT domain 627 908 1.2E-52 T 23-04-2016 IPR024983 CHAT domain NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 245 279 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 87 120 0.51 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 320 353 31.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 169 202 0.26 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 211 244 31.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SMART SM00028 129 162 110.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Pfam PF13374 Tetratricopeptide repeat 249 271 0.0038 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 PANTHER PTHR23083 869 903 5.4E-16 T 23-04-2016 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 PANTHER PTHR23083 322 366 5.4E-16 T 23-04-2016 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 PANTHER PTHR23083 64 275 5.4E-16 T 23-04-2016 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Gene3D G3DSA:1.25.40.10 63 226 4.8E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 Pfam PF13424 Tetratricopeptide repeat 170 235 3.5E-10 T 23-04-2016 NIAKO_RS14910 075306eee0473be6d355fcc4cda80355 945 SUPERFAMILY SSF48452 246 350 7.78E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 150 270 4.0E-5 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 135 1.0E-16 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 SUPERFAMILY SSF51735 3 172 2.7E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 Gene3D G3DSA:3.30.360.10 157 279 3.2E-30 T 23-04-2016 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 Gene3D G3DSA:3.30.360.10 328 381 3.2E-30 T 23-04-2016 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 SUPERFAMILY SSF55347 143 312 1.39E-30 T 23-04-2016 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 PANTHER PTHR22604 1 388 1.3E-56 T 23-04-2016 NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 Gene3D G3DSA:3.40.50.720 1 156 4.6E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30790 1b645ac6b1fffc3d6f3cecef0118e580 388 PANTHER PTHR22604:SF123 1 388 1.3E-56 T 23-04-2016 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 PANTHER PTHR18968 1 573 5.0E-257 T 23-04-2016 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 183 2.6E-52 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Gene3D G3DSA:3.40.50.970 15 186 1.1E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 340 4.1E-41 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 SUPERFAMILY SSF52518 380 568 1.43E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Gene3D G3DSA:3.40.50.970 358 564 8.4E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 550 7.5E-49 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 440 459 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 PANTHER PTHR18968:SF116 1 573 5.0E-257 T 23-04-2016 NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 SUPERFAMILY SSF52518 10 188 6.4E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 Gene3D G3DSA:3.40.50.1220 203 357 6.0E-57 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 SUPERFAMILY SSF52467 203 363 1.9E-54 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS20790 1ec766ccd9b3d0659a140b3a0e4f878c 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 17 571 2.1E-204 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 Pfam PF03572 Peptidase family S41 197 389 5.3E-18 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 SMART SM00245 163 392 2.5E-4 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 SUPERFAMILY SSF52096 170 414 2.49E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 SUPERFAMILY SSF52096 49 131 2.49E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 Gene3D G3DSA:3.30.750.44 51 120 4.7E-5 T 23-04-2016 NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 PANTHER PTHR32060 236 412 4.6E-13 T 23-04-2016 NIAKO_RS18305 de9c9cd1c08123accc43fe0bcf82320f 416 Gene3D G3DSA:3.90.226.10 190 415 5.0E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 SUPERFAMILY SSF56219 274 373 1.44E-43 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 SUPERFAMILY SSF56219 105 247 1.44E-43 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 PANTHER PTHR14859 62 254 9.5E-17 T 23-04-2016 IPR027317 PGAP2-interacting protein NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 PANTHER PTHR14859 287 378 9.5E-17 T 23-04-2016 IPR027317 PGAP2-interacting protein NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 109 366 7.7E-26 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29875 610ef01b9946f556a5dd495e643ab273 378 Gene3D G3DSA:3.60.10.10 95 374 8.6E-22 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 Gene3D G3DSA:3.30.2080.10 608 756 2.5E-55 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 SUPERFAMILY SSF48208 274 734 5.95E-26 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 PANTHER PTHR12143:SF22 402 766 5.3E-141 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 PANTHER PTHR12143:SF22 1 378 5.3E-141 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 PANTHER PTHR12143 402 766 5.3E-141 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 PANTHER PTHR12143 1 378 5.3E-141 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 Gene3D G3DSA:2.70.98.10 23 331 5.4E-84 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 Gene3D G3DSA:1.20.1050.60 355 442 2.6E-24 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 Pfam PF07971 Glycosyl hydrolase family 92 246 747 3.3E-151 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 Gene3D G3DSA:1.20.1610.10 456 607 5.1E-51 T 23-04-2016 NIAKO_RS02615 6875de8998538b69f1fe433b6e30a958 775 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 750 7.2E-158 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 PANTHER PTHR11695 12 335 3.3E-91 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 Gene3D G3DSA:3.40.50.720 160 280 1.1E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 SUPERFAMILY SSF51735 131 300 1.28E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 Gene3D G3DSA:3.90.180.10 1 159 5.8E-44 T 23-04-2016 IPR011032 GroES-like NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 Pfam PF00107 Zinc-binding dehydrogenase 168 292 4.8E-21 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 SUPERFAMILY SSF50129 1 165 1.83E-40 T 23-04-2016 IPR011032 GroES-like NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 126 1.8E-25 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS31900 ea88ebcea763a3c85e99241f7b6074fc 336 PANTHER PTHR11695:SF38 12 335 3.3E-91 T 23-04-2016 NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.60.40.670 3738 3822 2.2E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SUPERFAMILY SSF49265 3911 3978 3.6E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Pfam PF13229 Right handed beta helix region 1521 1663 2.6E-5 T 23-04-2016 NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Pfam PF13229 Right handed beta helix region 464 651 5.3E-8 T 23-04-2016 NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SUPERFAMILY SSF51126 1997 2234 2.67E-7 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SUPERFAMILY SSF51126 2559 2971 6.98E-10 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 3001 3019 1.1E-9 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 324 766 2.0E-5 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 1548 1874 1.0E-6 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 1966 2441 2.3E-8 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 2547 2650 1.1E-9 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.160.20.10 2686 2965 1.1E-9 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2099 2127 2100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1500 1526 4000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1651 1682 1300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2224 2245 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 520 548 230.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 470 491 3.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2892 2913 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 430 458 250.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 497 519 6700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2140 2161 340.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2318 2345 2500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 549 580 2800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1691 1713 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1569 1590 210.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1597 1619 8.8 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2835 2856 8300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1528 1556 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2192 2221 1000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2169 2191 7.1 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2724 2746 270.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2808 2834 1300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 380 402 3900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2695 2716 5.6 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2072 2097 4700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 2747 2774 6400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1620 1648 1100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SMART SM00710 1750 1777 2600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SUPERFAMILY SSF51126 328 747 3.14E-11 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 3996 4080 4.9E-14 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Pfam PF13585 C-terminal domain of CHU protein family 3994 4079 5.2E-20 T 23-04-2016 NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 SUPERFAMILY SSF49299 3702 3820 5.0E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS19280 2f241bf478194104aee50d7fa5ab2f64 4081 Gene3D G3DSA:2.60.40.10 3911 3988 6.0E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 SUPERFAMILY SSF51338 495 546 3.75E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 SUPERFAMILY SSF51338 22 81 3.75E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 PANTHER PTHR22935 285 564 2.7E-32 T 23-04-2016 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 Gene3D G3DSA:2.30.40.10 477 555 8.8E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 Gene3D G3DSA:3.20.20.140 412 476 6.1E-92 T 23-04-2016 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 Gene3D G3DSA:3.20.20.140 86 305 6.1E-92 T 23-04-2016 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 SUPERFAMILY SSF51556 92 313 1.44E-63 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 SUPERFAMILY SSF51556 356 495 1.44E-63 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 Gene3D G3DSA:2.30.40.10 27 85 3.9E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 Pfam PF07969 Amidohydrolase family 69 539 7.4E-20 T 23-04-2016 IPR013108 Amidohydrolase 3 NIAKO_RS24980 ef8edf9e7ea805c8e76be854b61151ef 567 PANTHER PTHR22935:SF10 285 564 2.7E-32 T 23-04-2016 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 Gene3D G3DSA:2.170.130.10 113 227 6.4E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 Gene3D G3DSA:2.60.40.1120 31 104 6.6E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 227 1.6E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 SUPERFAMILY SSF49464 31 123 1.44E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 Gene3D G3DSA:2.40.170.20 232 756 3.6E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 PANTHER PTHR30069:SF1 25 644 1.3E-39 T 23-04-2016 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 SUPERFAMILY SSF56935 504 762 8.63E-80 T 23-04-2016 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 SUPERFAMILY SSF56935 110 470 8.63E-80 T 23-04-2016 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 Pfam PF13715 CarboxypepD_reg-like domain 32 116 2.7E-18 T 23-04-2016 NIAKO_RS14415 61ad87ee4a465ac09ca3a75e7af13dfd 790 PANTHER PTHR30069 25 644 1.3E-39 T 23-04-2016 NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 175 206 - T 23-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 PANTHER PTHR13794 1 335 7.9E-98 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 10 118 5.1E-10 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 SMART SM00922 136 225 5.0E-20 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 Pfam PF13378 Enolase C-terminal domain-like 141 336 2.2E-38 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 SUPERFAMILY SSF54826 1 118 7.71E-23 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 PANTHER PTHR13794:SF60 1 335 7.9E-98 T 23-04-2016 NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 Gene3D G3DSA:3.20.20.120 122 333 1.4E-63 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 SUPERFAMILY SSF51604 106 335 1.31E-57 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS12625 db8dd56c68f20bc49dc37665b0f6acf2 341 Gene3D G3DSA:3.30.390.10 7 121 6.8E-25 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00278 64 83 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00278 104 123 120.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00278 409 428 2500.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00278 139 158 530.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SUPERFAMILY SSF47802 11 93 6.15E-14 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Gene3D G3DSA:1.10.150.20 106 155 1.5E-4 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SUPERFAMILY SSF81301 176 330 7.94E-41 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PANTHER PTHR11276 13 335 9.2E-65 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00483 12 331 1.8E-22 T 23-04-2016 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Pfam PF14520 Helix-hairpin-helix domain 105 160 1.7E-6 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Pfam PF14791 DNA polymerase beta thumb 269 331 5.3E-23 T 23-04-2016 IPR029398 DNA polymerase beta, thumb domain NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Gene3D G3DSA:3.30.210.10 271 331 1.8E-26 T 23-04-2016 IPR029398 DNA polymerase beta, thumb domain NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Gene3D G3DSA:3.20.20.140 353 585 6.7E-38 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 313 330 4.2E-10 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 269 276 4.2E-10 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 254 262 4.2E-10 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 71 88 4.2E-10 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Gene3D G3DSA:1.10.150.110 8 97 2.4E-18 T 23-04-2016 IPR027421 DNA polymerase family X lyase domain NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Gene3D G3DSA:3.30.460.10 156 270 3.6E-22 T 23-04-2016 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 PIRSF PIRSF005047 12 587 8.1E-200 T 23-04-2016 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 Pfam PF14716 Helix-hairpin-helix domain 14 84 1.9E-12 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SUPERFAMILY SSF89550 353 586 2.62E-41 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS11310 4836b9a97c2751b59cb9282974503c39 596 SMART SM00481 355 436 9.6E-6 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS10375 70a65af0d62ab02adb82a1a3bdbba9f6 138 SUPERFAMILY SSF54593 2 138 7.92E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS10375 70a65af0d62ab02adb82a1a3bdbba9f6 138 Gene3D G3DSA:3.10.180.10 1 137 8.9E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS10375 70a65af0d62ab02adb82a1a3bdbba9f6 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 NIAKO_RS10375 70a65af0d62ab02adb82a1a3bdbba9f6 138 PANTHER PTHR36437 1 138 1.2E-23 T 23-04-2016 NIAKO_RS10375 70a65af0d62ab02adb82a1a3bdbba9f6 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 131 4.9E-9 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF56935 123 292 8.06E-87 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF56935 503 863 8.06E-87 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF56935 921 966 8.06E-87 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF56935 1012 1103 8.06E-87 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF56935 366 456 8.06E-87 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 269 2.1E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.60.40.1120 43 126 1.3E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 245 275 4.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 SUPERFAMILY SSF49464 42 118 2.75E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532:SF51 587 1104 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532:SF51 43 208 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532:SF51 236 475 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 42 1105 7.6E-193 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Pfam PF00593 TonB dependent receptor 692 1104 6.0E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Pfam PF13715 CarboxypepD_reg-like domain 43 124 6.3E-18 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.170.130.10 127 269 5.8E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532 587 1104 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532 43 208 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 PANTHER PTHR11532 236 475 4.5E-199 T 23-04-2016 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 270 306 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 914 955 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 989 990 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 1022 1104 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 498 863 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02655 cb1d0dacbf2b2baa9508fa957a547124 1106 Gene3D G3DSA:2.40.170.20 375 459 1.7E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22625 1177592453f54485221714261b218d57 261 PANTHER PTHR31571:SF1 22 255 2.6E-16 T 23-04-2016 NIAKO_RS22625 1177592453f54485221714261b218d57 261 SUPERFAMILY SSF51695 29 251 8.63E-17 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS22625 1177592453f54485221714261b218d57 261 Gene3D G3DSA:3.20.20.190 43 255 4.3E-9 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS22625 1177592453f54485221714261b218d57 261 PANTHER PTHR31571 22 255 2.6E-16 T 23-04-2016 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 Gene3D G3DSA:3.30.390.10 6 139 7.2E-33 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 SMART SM00922 183 278 3.2E-15 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 Pfam PF13378 Enolase C-terminal domain-like 186 398 2.3E-41 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 PANTHER PTHR13794 7 151 3.4E-136 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 PANTHER PTHR13794 171 424 3.4E-136 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 Gene3D G3DSA:3.20.20.120 140 392 1.6E-62 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 SUPERFAMILY SSF54826 8 137 2.19E-23 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 PANTHER PTHR13794:SF56 7 151 3.4E-136 T 23-04-2016 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 PANTHER PTHR13794:SF56 171 424 3.4E-136 T 23-04-2016 NIAKO_RS13235 b3b590b5e75afd023d0e384c0d509d3a 435 SUPERFAMILY SSF51604 137 407 5.85E-64 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.40.170.20 327 403 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.40.170.20 969 1059 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.40.170.20 862 894 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.40.170.20 250 290 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.40.170.20 454 818 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 224 254 6.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.60.40.1120 29 109 9.2E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532 8 193 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532 215 449 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532 524 1057 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF56935 852 896 1.36E-74 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF56935 964 1059 1.36E-74 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF56935 105 272 1.36E-74 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF56935 452 786 1.36E-74 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF56935 320 407 1.36E-74 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Gene3D G3DSA:2.170.130.10 110 249 6.7E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532:SF51 8 193 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532:SF51 215 449 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 PANTHER PTHR11532:SF51 524 1057 2.5E-160 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 248 3.9E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 SUPERFAMILY SSF49464 28 98 8.76E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 Pfam PF13715 CarboxypepD_reg-like domain 29 108 1.6E-14 T 23-04-2016 NIAKO_RS19190 3bfc140c2edec4b7a1e2776341da9ec2 1059 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1059 2.9E-178 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 SUPERFAMILY SSF51905 1 188 2.92E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 SUPERFAMILY SSF56014 630 804 4.32E-47 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Gene3D G3DSA:3.30.413.10 629 766 3.2E-33 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Gene3D G3DSA:3.50.50.60 106 227 7.1E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 557 619 2.3E-12 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PANTHER PTHR11493 416 832 1.7E-277 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PANTHER PTHR11493 1 252 1.7E-277 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.4E-8 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 2.4E-8 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.4E-8 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 2.4E-8 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.9E-17 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 8.9E-17 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 8.9E-17 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 8.9E-17 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 8.9E-17 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Gene3D G3DSA:3.50.50.60 1 105 2.4E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 SUPERFAMILY SSF55124 499 638 1.03E-28 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 290 2.8E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Gene3D G3DSA:3.50.50.60 228 311 4.8E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00397 Sirohaem Fe-binding site signature 676 694 3.2E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PRINTS PR00397 Sirohaem Fe-binding site signature 633 651 3.2E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 3 798 0.0 T 23-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PIRSF PIRSF037149 1 832 0.0 T 23-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 676 692 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 SUPERFAMILY SSF51905 146 305 2.39E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Pfam PF04324 BFD-like [2Fe-2S] binding domain 481 530 1.4E-6 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Pfam PF04324 BFD-like [2Fe-2S] binding domain 420 468 3.4E-12 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 629 762 1.2E-17 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PANTHER PTHR11493:SF52 416 832 1.7E-277 T 23-04-2016 NIAKO_RS26160 7b09cb3cfd66dcebf57066559bcdbb59 833 PANTHER PTHR11493:SF52 1 252 1.7E-277 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:1.10.287.130 875 936 1.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF12833 Helix-turn-helix domain 1325 1403 4.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SMART SM00388 884 950 4.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:2.120.10.30 114 174 3.2E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF52172 1154 1282 7.12E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF00072 Response regulator receiver domain 1159 1269 2.5E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SMART SM00387 996 1107 9.3E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423 799 830 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423 188 263 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423 864 1311 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423 50 134 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:3.40.50.2300 1154 1281 7.7E-35 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 997 1104 1.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF47384 874 950 3.34E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF63829 56 227 1.5E-11 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1091 1104 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1067 1085 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1051 1061 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1047 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SMART SM00342 1319 1402 4.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:2.120.10.30 533 645 3.7E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:2.120.10.30 285 510 1.1E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:2.120.10.30 175 197 1.1E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF55874 939 1103 6.42E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07495 Y_Y_Y domain 739 801 4.6E-16 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:3.30.565.10 937 1103 4.8E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SMART SM00448 1157 1269 9.3E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423:SF487 799 830 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423:SF487 188 263 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423:SF487 864 1311 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 PANTHER PTHR24423:SF487 50 134 4.0E-123 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF63829 208 463 1.05E-17 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07494 Two component regulator propeller 604 627 0.0094 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07494 Two component regulator propeller 434 456 0.0064 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07494 Two component regulator propeller 386 408 0.0062 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07494 Two component regulator propeller 64 87 5.6E-6 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF07494 Two component regulator propeller 338 360 0.016 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:1.10.10.60 1356 1404 1.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF63829 397 628 4.58E-19 T 23-04-2016 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Gene3D G3DSA:1.10.10.60 1298 1355 3.9E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 887 950 1.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15860 efef8e423784695bf5e072e37684fbf7 1421 SUPERFAMILY SSF46689 1355 1406 2.11E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Pfam PF00593 TonB dependent receptor 639 946 3.5E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 SUPERFAMILY SSF49464 100 185 8.5E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Gene3D G3DSA:2.40.170.20 320 976 2.6E-66 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Gene3D G3DSA:2.60.40.1120 100 191 9.6E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 SUPERFAMILY SSF56935 417 933 7.33E-77 T 23-04-2016 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 SUPERFAMILY SSF56935 183 387 7.33E-77 T 23-04-2016 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Pfam PF13715 CarboxypepD_reg-like domain 101 184 1.6E-14 T 23-04-2016 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 PANTHER PTHR30069:SF4 183 870 1.9E-50 T 23-04-2016 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 197 316 7.9E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 PANTHER PTHR30069 183 870 1.9E-50 T 23-04-2016 NIAKO_RS16885 629dcc2f8931250c1f77053c1adbcdab 978 Gene3D G3DSA:2.170.130.10 197 319 5.5E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35095 16d58fa5ceb1eed88f39c4747d696192 472 Pfam PF12771 Starch-binding associating with outer membrane 1 223 9.4E-13 T 23-04-2016 NIAKO_RS35095 16d58fa5ceb1eed88f39c4747d696192 472 SUPERFAMILY SSF48452 20 464 1.11E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35095 16d58fa5ceb1eed88f39c4747d696192 472 Pfam PF07980 SusD family 253 422 4.7E-10 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS35095 16d58fa5ceb1eed88f39c4747d696192 472 Gene3D G3DSA:1.25.40.10 201 352 2.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35095 16d58fa5ceb1eed88f39c4747d696192 472 Gene3D G3DSA:1.25.40.10 387 406 2.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762:SF7 180 545 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762:SF7 565 685 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762:SF7 70 155 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762 180 545 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762 565 685 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 PANTHER PTHR22762 70 155 3.0E-70 T 23-04-2016 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 Pfam PF17137 Domain of unknown function (DUF5110) 645 703 4.0E-14 T 23-04-2016 IPR033403 Domain of unknown function DUF5110 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 SUPERFAMILY SSF51445 208 523 1.11E-28 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 Pfam PF01055 Glycosyl hydrolases family 31 198 627 2.9E-75 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 SUPERFAMILY SSF74650 80 205 3.77E-14 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS26405 0ec3418ee9b97ca50ddd266e33af10ca 714 SUPERFAMILY SSF51011 559 622 2.52E-15 T 23-04-2016 NIAKO_RS25280 64868a332245930fce0d10557cbb142d 365 PANTHER PTHR19328 43 355 3.8E-61 T 23-04-2016 NIAKO_RS25280 64868a332245930fce0d10557cbb142d 365 SUPERFAMILY SSF50952 37 355 5.1E-36 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NIAKO_RS25280 64868a332245930fce0d10557cbb142d 365 Pfam PF07995 Glucose / Sorbosone dehydrogenase 43 355 3.3E-89 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NIAKO_RS25280 64868a332245930fce0d10557cbb142d 365 Gene3D G3DSA:2.120.10.30 36 363 1.2E-98 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 PANTHER PTHR16254 7 397 1.2E-95 T 23-04-2016 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 Gene3D G3DSA:3.30.70.1450 582 658 4.0E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 Gene3D G3DSA:3.30.70.1450 667 740 5.1E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 PANTHER PTHR16254:SF14 7 397 1.2E-95 T 23-04-2016 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 Pfam PF00999 Sodium/hydrogen exchanger family 13 377 3.9E-57 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 SUPERFAMILY SSF116726 581 656 6.15E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 SUPERFAMILY SSF116726 666 739 1.57E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 Pfam PF02080 TrkA-C domain 673 739 7.3E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS04605 dfd2bd96ffcde813a51d7955976aaabe 744 Pfam PF02080 TrkA-C domain 587 655 2.4E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NIAKO_RS23045 29730707d2ce3030b8861153865eddaf 264 SUPERFAMILY SSF55486 235 264 1.9E-18 T 23-04-2016 NIAKO_RS23045 29730707d2ce3030b8861153865eddaf 264 SUPERFAMILY SSF55486 100 202 1.9E-18 T 23-04-2016 NIAKO_RS23045 29730707d2ce3030b8861153865eddaf 264 Gene3D G3DSA:3.40.390.10 100 264 5.7E-14 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS23045 29730707d2ce3030b8861153865eddaf 264 Pfam PF12388 Dual-action HEIGH metallo-peptidase 62 264 1.7E-52 T 23-04-2016 IPR024653 Peptidase, metallopeptidase M10/M27/M57 NIAKO_RS07055 212b0dcc714ee51e0057574aa963edbb 296 Gene3D G3DSA:3.40.50.720 1 199 1.4E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07055 212b0dcc714ee51e0057574aa963edbb 296 SUPERFAMILY SSF51735 1 257 1.93E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07055 212b0dcc714ee51e0057574aa963edbb 296 PANTHER PTHR14194 1 265 2.0E-16 T 23-04-2016 NIAKO_RS07055 212b0dcc714ee51e0057574aa963edbb 296 Pfam PF13460 NAD(P)H-binding 7 114 4.5E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS37395 354fb326ea07ceb18a289a74beb1fa24 218 Pfam PF06736 Protein of unknown function (DUF1211) 16 107 1.7E-26 T 23-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 NIAKO_RS37395 354fb326ea07ceb18a289a74beb1fa24 218 PANTHER PTHR31462 12 197 7.2E-18 T 23-04-2016 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PANTHER PTHR24423 112 377 2.0E-40 T 23-04-2016 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 Gene3D G3DSA:3.30.565.10 220 376 3.2E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 SUPERFAMILY SSF55874 214 377 2.88E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PANTHER PTHR24423:SF518 112 377 2.0E-40 T 23-04-2016 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 376 9.8E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 SMART SM00387 258 379 2.5E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS11210 913e42c88f9abb47e6ffdca8468e6fb5 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS00475 dc4834e76ea77beb9238f96b1d4ce6e8 523 Gene3D G3DSA:1.25.40.10 104 133 8.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00475 dc4834e76ea77beb9238f96b1d4ce6e8 523 Gene3D G3DSA:1.25.40.10 365 394 8.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00475 dc4834e76ea77beb9238f96b1d4ce6e8 523 Pfam PF13181 Tetratricopeptide repeat 365 391 7.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 248 275 4100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 796 818 7.6 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 194 215 1.2 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 152 181 21.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 344 373 5800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 225 247 15.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 277 305 650.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 122 150 10000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 310 336 290.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 849 880 2600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 819 847 6100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 765 786 360.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 722 751 2000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SMART SM00710 886 912 4100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 Pfam PF13585 C-terminal domain of CHU protein family 1167 1250 1.6E-16 T 23-04-2016 NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 Gene3D G3DSA:2.160.20.10 15 502 3.7E-14 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 Gene3D G3DSA:2.160.20.10 647 1070 1.6E-10 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SUPERFAMILY SSF51126 47 391 1.59E-15 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1168 1253 3.5E-11 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 Pfam PF13229 Right handed beta helix region 196 384 1.8E-5 T 23-04-2016 NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 Pfam PF13229 Right handed beta helix region 796 970 1.7E-5 T 23-04-2016 NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 SUPERFAMILY SSF51126 640 924 2.93E-8 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS22350 4af2103570eeb8659459565dfe5f4ff0 1253 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 795 831 1.9E-6 T 23-04-2016 IPR022441 Parallel beta-helix repeat-2 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Gene3D G3DSA:2.60.40.320 214 334 2.6E-12 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 SUPERFAMILY SSF51445 330 639 4.85E-41 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Gene3D G3DSA:3.20.20.80 336 660 3.1E-30 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 SUPERFAMILY SSF49785 112 220 6.09E-30 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 SUPERFAMILY SSF49785 21 72 6.09E-30 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 487 1.4E-4 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 PANTHER PTHR10066 113 498 1.8E-52 T 23-04-2016 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 PANTHER PTHR10066 24 83 1.8E-52 T 23-04-2016 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Pfam PF00703 Glycosyl hydrolases family 2 222 333 4.4E-11 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 27 205 2.3E-13 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 Gene3D G3DSA:2.60.120.260 22 213 4.0E-31 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17910 1e3d177accc4c26be77942366c1841ab 967 SUPERFAMILY SSF49303 222 333 2.37E-6 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SMART SM00316 565 655 0.0068 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SUPERFAMILY SSF50249 160 564 1.85E-138 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Pfam PF00773 RNB domain 196 523 5.1E-113 T 23-04-2016 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 9 648 4.8E-150 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SUPERFAMILY SSF50249 567 647 9.93E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Gene3D G3DSA:2.40.50.140 567 645 1.3E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SMART SM00357 21 82 1.8E-5 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SMART SM00357 90 150 2.0 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 PANTHER PTHR23355:SF9 20 649 9.7E-224 T 23-04-2016 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Hamap MF_01895 Ribonuclease R [rnr]. 3 649 51.878 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Pfam PF08206 Ribonuclease B OB domain 22 81 1.4E-9 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Pfam PF08206 Ribonuclease B OB domain 100 149 2.4E-8 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 PANTHER PTHR23355 20 649 9.7E-224 T 23-04-2016 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SUPERFAMILY SSF50249 19 151 5.78E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 Pfam PF00575 S1 RNA binding domain 565 644 1.2E-4 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 SMART SM00955 196 524 3.0E-154 T 23-04-2016 NIAKO_RS04485 cf7c84a289f9f83fb8051306ee334e1e 699 TIGRFAM TIGR02063 RNase_R: ribonuclease R 4 648 6.2E-208 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 PANTHER PTHR11228:SF7 19 209 1.4E-31 T 23-04-2016 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 PANTHER PTHR11228:SF7 227 304 1.4E-31 T 23-04-2016 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 Pfam PF13353 4Fe-4S single cluster domain 27 133 4.8E-12 T 23-04-2016 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 SUPERFAMILY SSF102114 15 314 2.75E-38 T 23-04-2016 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 Gene3D G3DSA:3.20.20.70 17 307 1.0E-35 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 Pfam PF04055 Radical SAM superfamily 25 164 6.3E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 PANTHER PTHR11228 19 209 1.4E-31 T 23-04-2016 NIAKO_RS08505 fc2c6dde4d752017d56b8c681fc7281b 352 PANTHER PTHR11228 227 304 1.4E-31 T 23-04-2016 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 Gene3D G3DSA:2.30.40.10 4 69 1.1E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 Gene3D G3DSA:3.20.20.140 70 335 1.0E-82 T 23-04-2016 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 PANTHER PTHR11113 6 365 5.5E-108 T 23-04-2016 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 Pfam PF01979 Amidohydrolase family 52 356 8.4E-18 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 361 8.6E-91 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 PIRSF PIRSF038994 1 365 8.9E-101 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 PANTHER PTHR11113:SF7 6 365 5.5E-108 T 23-04-2016 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 SUPERFAMILY SSF51338 4 54 3.7E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31120 2803427807b99b185492f6e485bffde1 365 SUPERFAMILY SSF51556 56 335 2.21E-78 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS28435 ca17f3ad1b67f76d3840381167ee9428 153 PANTHER PTHR10681 4 151 1.7E-51 T 23-04-2016 NIAKO_RS28435 ca17f3ad1b67f76d3840381167ee9428 153 PIRSF PIRSF000239 1 150 3.3E-22 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS28435 ca17f3ad1b67f76d3840381167ee9428 153 Gene3D G3DSA:3.40.30.10 4 151 5.2E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS28435 ca17f3ad1b67f76d3840381167ee9428 153 SUPERFAMILY SSF52833 1 150 1.28E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS28435 ca17f3ad1b67f76d3840381167ee9428 153 Pfam PF00578 AhpC/TSA family 7 134 3.2E-39 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 SMART SM00633 79 549 3.9E-43 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Gene3D G3DSA:3.20.20.80 300 550 3.9E-95 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Gene3D G3DSA:3.20.20.80 44 132 3.9E-95 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Pfam PF00331 Glycosyl hydrolase family 10 301 545 7.2E-59 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Pfam PF00331 Glycosyl hydrolase family 10 42 120 9.3E-14 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Pfam PF02018 Carbohydrate binding domain 143 268 1.5E-14 T 23-04-2016 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 SUPERFAMILY SSF51445 42 121 3.9E-75 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 SUPERFAMILY SSF51445 290 549 3.9E-75 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 447 457 - T 23-04-2016 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 Gene3D G3DSA:2.60.120.260 139 285 1.6E-26 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PRINTS PR00134 Glycosyl hydrolase family 10 signature 414 426 1.1E-12 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PRINTS PR00134 Glycosyl hydrolase family 10 signature 110 122 1.1E-12 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PRINTS PR00134 Glycosyl hydrolase family 10 signature 385 396 1.1E-12 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PRINTS PR00134 Glycosyl hydrolase family 10 signature 322 333 1.1E-12 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PANTHER PTHR31490 307 458 1.1E-44 T 23-04-2016 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 PANTHER PTHR31490 475 546 1.1E-44 T 23-04-2016 NIAKO_RS13060 c271f19357becf95cc6bc2bd647e1cf3 552 SUPERFAMILY SSF49785 140 285 5.39E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 PANTHER PTHR11019:SF65 18 290 9.6E-32 T 23-04-2016 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 Pfam PF12833 Helix-turn-helix domain 205 283 1.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 Gene3D G3DSA:1.10.10.60 181 235 1.5E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 SUPERFAMILY SSF46689 182 230 5.91E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 SUPERFAMILY SSF46689 235 285 2.82E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 SMART SM00342 199 282 8.2E-29 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 PANTHER PTHR11019 18 290 9.6E-32 T 23-04-2016 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21565 90b25fb3376aa39f692e15c0c3cbecf5 292 Gene3D G3DSA:1.10.10.60 236 285 4.0E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 Pfam PF00005 ABC transporter 28 155 3.4E-14 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 Gene3D G3DSA:3.40.50.300 1 187 9.4E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 SUPERFAMILY SSF52540 4 191 7.86E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 PANTHER PTHR24220 3 207 1.2E-32 T 23-04-2016 NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 PANTHER PTHR24220:SF595 3 207 1.2E-32 T 23-04-2016 NIAKO_RS19920 ee909fc9364b39acd59c14c27c90c07b 210 SMART SM00382 25 205 0.0022 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 Gene3D G3DSA:3.40.570.10 209 452 1.1E-59 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 SUPERFAMILY SSF54060 208 452 1.77E-67 T 23-04-2016 NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 PANTHER PTHR13966 228 439 4.1E-35 T 23-04-2016 NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 SMART SM00892 232 442 1.6E-40 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 SMART SM00477 233 442 5.9E-46 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 NIAKO_RS23525 e519ba70ec3a04dd58c23c218e6cd6bc 454 Pfam PF01223 DNA/RNA non-specific endonuclease 224 441 8.1E-48 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 NIAKO_RS35475 5b9e297f0f05cdbb58e3fe9b195ab91b 120 Gene3D G3DSA:3.10.450.50 5 117 6.8E-7 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS35475 5b9e297f0f05cdbb58e3fe9b195ab91b 120 SUPERFAMILY SSF54427 1 120 1.12E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 SUPERFAMILY SSF51430 113 286 3.8E-36 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 SUPERFAMILY SSF51430 6 77 3.8E-36 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 Pfam PF00248 Aldo/keto reductase family 6 186 1.6E-30 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 Gene3D G3DSA:3.20.20.100 6 78 2.4E-35 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 Gene3D G3DSA:3.20.20.100 111 189 2.4E-35 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 PANTHER PTHR11732 1 79 1.6E-37 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS33350 e1a3efb9bd10fe2091689d749400ddc6 291 PANTHER PTHR11732 114 173 1.6E-37 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 PANTHER PTHR12149:SF8 1 287 2.0E-74 T 23-04-2016 NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 SUPERFAMILY SSF56112 5 286 6.09E-49 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 PIRSF PIRSF006221 2 287 6.2E-79 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 PANTHER PTHR12149 1 287 2.0E-74 T 23-04-2016 NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 Pfam PF03881 Fructosamine kinase 6 286 5.4E-79 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase NIAKO_RS24140 890ee4cb90cfbea18fbda53022e95bbc 287 Gene3D G3DSA:3.90.1200.10 92 284 4.3E-13 T 23-04-2016 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 12 116 1.8E-26 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 SUPERFAMILY SSF56003 120 747 1.57E-173 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.90.1170.50 2 117 4.1E-36 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 139 680 2.2E-181 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 154 260 1.4E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 338 426 6.0E-71 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 595 747 6.0E-71 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 PANTHER PTHR11908 1 528 1.4E-291 T 23-04-2016 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 PANTHER PTHR11908 555 753 1.4E-291 T 23-04-2016 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 PANTHER PTHR11908:SF66 1 528 1.4E-291 T 23-04-2016 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 PANTHER PTHR11908:SF66 555 753 1.4E-291 T 23-04-2016 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 262 337 1.7E-24 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 122 153 1.7E-24 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 SMART SM01008 11 118 2.2E-41 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 Gene3D G3DSA:3.30.365.10 427 585 1.6E-40 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS02220 3df625457c92f51c5fac5dc8173adcee 769 SUPERFAMILY SSF54665 3 117 1.18E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Pfam PF04539 Sigma-70 region 3 135 205 1.0E-16 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PIRSF PIRSF000770 9 282 6.2E-36 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PANTHER PTHR30603:SF0 3 284 8.7E-89 T 23-04-2016 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Gene3D G3DSA:1.10.601.10 12 123 2.6E-48 T 23-04-2016 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 SUPERFAMILY SSF88659 185 283 1.35E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Gene3D G3DSA:1.10.10.10 127 175 4.7E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 274 3.6E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PANTHER PTHR30603 3 284 8.7E-89 T 23-04-2016 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 SUPERFAMILY SSF88659 127 199 5.23E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Pfam PF04542 Sigma-70 region 2 54 123 1.7E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PRINTS PR00046 Major sigma-70 factor signature 260 271 2.8E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PRINTS PR00046 Major sigma-70 factor signature 245 260 2.8E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PRINTS PR00046 Major sigma-70 factor signature 224 236 2.8E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PRINTS PR00046 Major sigma-70 factor signature 102 110 2.8E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.8E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Pfam PF04545 Sigma-70, region 4 220 273 4.6E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Pfam PF00140 Sigma-70 factor, region 1.2 18 48 4.6E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 Gene3D G3DSA:1.10.10.10 214 284 2.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04430 6ddaac6ea44e757cc7f8274db044474e 285 SUPERFAMILY SSF88946 13 123 1.3E-41 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09205 c0fcb5b750681c8864e21251ab8d641e 90 Pfam PF12674 Putative zinc ribbon domain 6 83 3.9E-28 T 23-04-2016 IPR025868 Putative zinc ribbon domain NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 SUPERFAMILY SSF50993 10 419 1.36E-85 T 23-04-2016 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 Gene3D G3DSA:2.130.10.120 81 416 1.1E-101 T 23-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PANTHER PTHR11757:SF3 9 690 2.7E-297 T 23-04-2016 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 15 412 7.5E-102 T 23-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 Gene3D G3DSA:3.40.50.1820 430 663 6.8E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PANTHER PTHR11757 9 690 2.7E-297 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 SUPERFAMILY SSF53474 426 665 7.04E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 529 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 598 613 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 482 506 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 616 638 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 540 560 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 456 474 6.7E-53 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NIAKO_RS19900 c2b401f6ef291a395e3b1f7611e75ef5 690 Pfam PF00326 Prolyl oligopeptidase family 472 684 1.6E-63 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PANTHER PTHR22912 9 309 3.0E-151 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PANTHER PTHR22912:SF48 9 309 3.0E-151 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 Gene3D G3DSA:3.50.50.60 110 300 2.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 SUPERFAMILY SSF51905 1 308 6.29E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 Gene3D G3DSA:3.50.50.60 3 109 4.0E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 4.4E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.5E-36 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.5E-36 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.5E-36 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.5E-36 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-36 T 23-04-2016 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 2.3E-74 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS04440 35fcb06f1d9eff4b43b625afecf67701 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 306 6.7E-119 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 Gene3D G3DSA:2.170.130.10 57 173 6.4E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532:SF57 58 308 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532:SF57 470 950 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532:SF57 362 414 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532 58 308 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532 470 950 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 PANTHER PTHR11532 362 414 9.6E-194 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 164 1.8E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 47 952 2.6E-192 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 SUPERFAMILY SSF56935 873 926 4.58E-62 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 SUPERFAMILY SSF56935 788 832 4.58E-62 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 SUPERFAMILY SSF56935 55 189 4.58E-62 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 SUPERFAMILY SSF56935 373 715 4.58E-62 T 23-04-2016 NIAKO_RS09460 7a2c85778e9afd0936c25f02dabc0ecc 952 SUPERFAMILY SSF56935 243 342 4.58E-62 T 23-04-2016 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 6 182 1.2E-53 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 Gene3D G3DSA:1.20.1200.10 14 185 3.9E-62 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 Pfam PF01923 Cobalamin adenosyltransferase 5 170 3.5E-60 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 SUPERFAMILY SSF89028 4 183 8.44E-59 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 PANTHER PTHR12213 4 183 5.0E-74 T 23-04-2016 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 11 183 2.0E-31 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 NIAKO_RS26935 19527fc2a790c06b0a7433d3089500c4 187 PANTHER PTHR12213:SF0 4 183 5.0E-74 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Gene3D G3DSA:2.60.40.10 368 489 2.7E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Gene3D G3DSA:2.120.10.30 159 360 3.4E-37 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 PANTHER PTHR24103 45 315 8.2E-35 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 PANTHER PTHR24103 332 360 8.2E-35 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Gene3D G3DSA:2.120.10.30 34 136 9.0E-21 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 PANTHER PTHR24103:SF378 45 315 8.2E-35 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 PANTHER PTHR24103:SF378 332 360 8.2E-35 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Pfam PF01436 NHL repeat 333 357 1.7E-4 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Pfam PF01436 NHL repeat 278 302 3.8E-4 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 Pfam PF13585 C-terminal domain of CHU protein family 644 712 2.5E-7 T 23-04-2016 NIAKO_RS37220 59f52489d5e5364a65f3d0a2eb685d00 716 SUPERFAMILY SSF101898 49 359 8.63E-38 T 23-04-2016 NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 90 6.6E-19 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 Gene3D G3DSA:3.30.1310.10 3 95 3.8E-28 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 Pfam PF02575 YbaB/EbfC DNA-binding family 7 95 2.2E-26 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 PANTHER PTHR33449:SF1 2 95 1.2E-22 T 23-04-2016 NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 SUPERFAMILY SSF82607 2 94 2.88E-23 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 PANTHER PTHR33449 2 95 1.2E-22 T 23-04-2016 NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 94 16.602 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS20505 0bbfaaa02a3fc8b031ca1d470496920f 101 PIRSF PIRSF004555 1 100 5.7E-28 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 SUPERFAMILY SSF57829 3 60 4.7E-16 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 Pfam PF00471 Ribosomal protein L33 8 60 2.3E-20 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 PANTHER PTHR15238:SF3 1 60 4.6E-25 T 23-04-2016 NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 60 15.462 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 60 5.4E-19 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12715 274e64462dcc0c79ff6a72a3b120cfa1 60 PANTHER PTHR15238 1 60 4.6E-25 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF56935 939 1026 1.74E-68 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF56935 306 405 1.74E-68 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF56935 439 789 1.74E-68 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF56935 103 249 1.74E-68 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF56935 858 900 1.74E-68 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 PANTHER PTHR11532 534 1024 6.1E-267 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 PANTHER PTHR11532 1 424 6.1E-267 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Pfam PF13715 CarboxypepD_reg-like domain 26 107 1.1E-9 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Gene3D G3DSA:2.60.40.1120 26 90 2.3E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 PANTHER PTHR11532:SF57 534 1024 6.1E-267 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 PANTHER PTHR11532:SF57 1 424 6.1E-267 T 23-04-2016 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 SUPERFAMILY SSF49464 24 105 5.23E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 225 7.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Gene3D G3DSA:2.40.170.20 668 787 6.4E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Gene3D G3DSA:2.40.170.20 316 630 6.4E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1026 2.4E-261 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 201 231 5.0E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 ProSitePatterns PS00018 EF-hand calcium-binding domain. 845 857 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS06665 3f13ba6838abf30fb5ab3d033a9b391b 1026 Gene3D G3DSA:2.170.130.10 105 228 2.9E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 SUPERFAMILY SSF51905 347 370 3.37E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 SUPERFAMILY SSF51905 5 213 3.37E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 6 370 2.6E-122 T 23-04-2016 IPR017741 FAD-dependent oxidoreductase, HpnW NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 PANTHER PTHR13847 7 371 2.0E-29 T 23-04-2016 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Gene3D G3DSA:3.30.9.10 83 139 2.7E-7 T 23-04-2016 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Gene3D G3DSA:3.30.9.10 212 228 2.7E-7 T 23-04-2016 NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Gene3D G3DSA:3.40.50.720 7 77 4.5E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Gene3D G3DSA:3.40.50.720 140 211 4.5E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Gene3D G3DSA:3.40.50.720 324 372 4.5E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13330 5425c0f856b6e3181ca6c1ed021e2e2f 375 Pfam PF01266 FAD dependent oxidoreductase 7 372 3.7E-40 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376 1340 1400 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376 1000 1154 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376 1173 1258 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376 1 969 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Pfam PF05000 RNA polymerase Rpb1, domain 4 686 771 4.5E-15 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 SUPERFAMILY SSF64484 12 952 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 SUPERFAMILY SSF64484 1130 1289 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 SUPERFAMILY SSF64484 1331 1404 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376:SF32 1340 1400 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376:SF32 1000 1154 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376:SF32 1173 1258 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 PANTHER PTHR19376:SF32 1 969 0.0 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 358 499 5.0E-36 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1413 10.231 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Gene3D G3DSA:2.40.50.100 1016 1056 1.5E-4 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Pfam PF04983 RNA polymerase Rpb1, domain 3 503 657 2.5E-21 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Pfam PF04997 RNA polymerase Rpb1, domain 1 12 356 1.5E-80 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 15 1287 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Gene3D G3DSA:2.40.40.20 431 502 3.1E-37 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Gene3D G3DSA:2.40.40.20 363 390 3.1E-37 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Gene3D G3DSA:2.40.50.100 1154 1207 2.8E-8 T 23-04-2016 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 SMART SM00663 249 528 1.2E-169 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS24160 cf3749c4fa2f69a79287173b66aad805 1430 Pfam PF04998 RNA polymerase Rpb1, domain 5 774 1351 6.6E-65 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Hamap MF_01884 Transcription termination factor Rho [rho]. 214 580 199.071 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Pfam PF07498 Rho termination factor, N-terminal domain 6 44 1.6E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Gene3D G3DSA:3.40.50.300 314 578 3.5E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SUPERFAMILY SSF50249 214 290 9.71E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 321 525 2.6E-24 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SUPERFAMILY SSF52540 255 533 5.93E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SMART SM00959 6 48 3.8E-9 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 PANTHER PTHR15184:SF34 145 579 3.2E-177 T 23-04-2016 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 579 2.4E-188 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SMART SM00357 217 283 2.1E-17 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Pfam PF07497 Rho termination factor, RNA-binding domain 217 290 8.4E-33 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SUPERFAMILY SSF68912 3 44 4.71E-8 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 SMART SM00382 332 517 3.2E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Gene3D G3DSA:2.40.50.140 211 290 1.8E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 Gene3D G3DSA:2.40.50.140 4 46 1.8E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31645 070133f542e8609f768bba5e80590c3d 580 PANTHER PTHR15184 145 579 3.2E-177 T 23-04-2016 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 SMART SM01134 71 232 4.0E-44 T 23-04-2016 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 PANTHER PTHR30363 1 248 1.9E-51 T 23-04-2016 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 Gene3D G3DSA:3.40.50.1360 74 211 3.1E-9 T 23-04-2016 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 PANTHER PTHR30363:SF1 1 248 1.9E-51 T 23-04-2016 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.3E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.3E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 SUPERFAMILY SSF46785 4 59 1.11E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.1E-13 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 SMART SM00420 6 58 7.7E-13 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 Gene3D G3DSA:1.10.10.10 1 55 1.0E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 Pfam PF00455 DeoR C terminal sensor domain 74 230 7.2E-38 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS19195 976a82ab34937e3dc4d8e59463f34b78 249 SUPERFAMILY SSF100950 74 232 1.05E-24 T 23-04-2016 NIAKO_RS02650 a5eb7f4b3af12f43ea3558d00eb9e9ce 490 PANTHER PTHR35148 52 490 4.2E-44 T 23-04-2016 NIAKO_RS02650 a5eb7f4b3af12f43ea3558d00eb9e9ce 490 Pfam PF12771 Starch-binding associating with outer membrane 7 474 2.6E-57 T 23-04-2016 NIAKO_RS02650 a5eb7f4b3af12f43ea3558d00eb9e9ce 490 SUPERFAMILY SSF48452 24 489 8.6E-108 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 PANTHER PTHR39207 1 712 0.0 T 23-04-2016 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 25 145 6.4E-25 T 23-04-2016 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 468 692 6.0E-96 T 23-04-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 SUPERFAMILY SSF55545 20 165 2.72E-32 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 149 467 8.1E-156 T 23-04-2016 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Gene3D G3DSA:3.90.1330.10 491 711 8.8E-93 T 23-04-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Gene3D G3DSA:3.30.379.10 21 161 1.3E-35 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 Gene3D G3DSA:3.20.20.80 166 487 4.2E-157 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 SUPERFAMILY SSF51445 167 712 3.58E-248 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03665 3f68bcfc831c78a0c18558c375b3f2f1 713 PIRSF PIRSF029900 1 713 1.7E-297 T 23-04-2016 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 Gene3D G3DSA:3.20.20.140 93 337 4.2E-88 T 23-04-2016 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 PANTHER PTHR11647 5 122 2.1E-22 T 23-04-2016 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 Pfam PF01979 Amidohydrolase family 75 401 1.1E-14 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 SUPERFAMILY SSF51556 79 353 2.78E-39 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 PIRSF PIRSF039004 19 414 6.6E-114 T 23-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 Gene3D G3DSA:2.30.40.10 338 403 1.5E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 PANTHER PTHR11647:SF73 5 122 2.1E-22 T 23-04-2016 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 Gene3D G3DSA:2.30.40.10 25 92 8.2E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS35620 b43395c54b873fa3a68ae2ce60ad76af 421 SUPERFAMILY SSF51338 25 96 2.06E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS23335 f914de5ce50fcbbd7a73386fb7e84aa1 117 Gene3D G3DSA:1.10.10.60 66 113 3.5E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23335 f914de5ce50fcbbd7a73386fb7e84aa1 117 PANTHER PTHR11019 18 113 1.0E-11 T 23-04-2016 NIAKO_RS23335 f914de5ce50fcbbd7a73386fb7e84aa1 117 SMART SM00342 37 112 1.7E-9 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23335 f914de5ce50fcbbd7a73386fb7e84aa1 117 Pfam PF12833 Helix-turn-helix domain 43 113 2.8E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23335 f914de5ce50fcbbd7a73386fb7e84aa1 117 SUPERFAMILY SSF46689 66 114 4.48E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PANTHER PTHR30295:SF6 1 154 1.5E-45 T 23-04-2016 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 2.7E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 2.7E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 2.7E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PIRSF PIRSF005900 1 157 4.4E-43 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 Gene3D G3DSA:1.20.1260.10 2 156 7.8E-55 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 SUPERFAMILY SSF47240 4 156 3.55E-41 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 PANTHER PTHR30295 1 154 1.5E-45 T 23-04-2016 NIAKO_RS29050 4f4707f0dbed0cc9fda573b068373867 157 Pfam PF00210 Ferritin-like domain 18 156 1.8E-27 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 Gene3D G3DSA:3.90.79.10 19 149 2.0E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 PANTHER PTHR22769 5 214 1.9E-25 T 23-04-2016 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 Pfam PF00293 NUDIX domain 25 143 6.0E-7 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 SUPERFAMILY SSF55811 22 156 2.76E-27 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 Gene3D G3DSA:1.10.10.10 154 228 2.7E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 PANTHER PTHR22769:SF33 5 214 1.9E-25 T 23-04-2016 NIAKO_RS29760 639f51f4a470d8ea2542b3f2f6899996 240 SUPERFAMILY SSF46785 160 226 1.77E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 SUPERFAMILY SSF49899 351 554 2.06E-37 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 PANTHER PTHR22925:SF11 28 555 6.6E-133 T 23-04-2016 NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 Gene3D G3DSA:2.115.10.20 27 335 1.5E-90 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 Pfam PF04616 Glycosyl hydrolases family 43 28 320 8.2E-91 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 Gene3D G3DSA:2.60.120.200 350 554 1.1E-40 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 PANTHER PTHR22925 28 555 6.6E-133 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13055 f7f98c6c0998d298b25e105f49660d06 558 SUPERFAMILY SSF75005 28 326 6.14E-88 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 17 95 1.8E-23 T 23-04-2016 IPR003849 Preprotein translocase YajC NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 PANTHER PTHR33909 1 93 3.0E-23 T 23-04-2016 NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 Pfam PF02699 Preprotein translocase subunit 17 94 3.8E-26 T 23-04-2016 IPR003849 Preprotein translocase YajC NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 PANTHER PTHR33909:SF1 1 93 3.0E-23 T 23-04-2016 NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 SMART SM01323 14 97 8.7E-36 T 23-04-2016 IPR003849 Preprotein translocase YajC NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 54 72 6.7E-10 T 23-04-2016 IPR003849 Preprotein translocase YajC NIAKO_RS04960 18788ccb32e5133e267ca1f7720784b8 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 16 36 6.7E-10 T 23-04-2016 IPR003849 Preprotein translocase YajC NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Gene3D G3DSA:2.60.40.1120 26 88 3.4E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 SUPERFAMILY SSF49464 26 105 3.66E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 PANTHER PTHR30069:SF2 5 553 3.2E-33 T 23-04-2016 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Gene3D G3DSA:2.40.170.20 229 721 6.3E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 SUPERFAMILY SSF56935 101 721 4.89E-90 T 23-04-2016 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 PANTHER PTHR30069 5 553 3.2E-33 T 23-04-2016 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Pfam PF00593 TonB dependent receptor 469 720 3.2E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Gene3D G3DSA:2.170.130.10 97 228 8.1E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 225 1.0E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03700 83a03312ab64026ce202c2e8cb3146b3 724 Pfam PF13715 CarboxypepD_reg-like domain 26 107 4.8E-13 T 23-04-2016 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 SUPERFAMILY SSF53383 125 489 8.9E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 PANTHER PTHR11751:SF294 107 488 2.9E-78 T 23-04-2016 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 SMART SM00345 22 81 1.7E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 SUPERFAMILY SSF46785 10 84 5.46E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 Gene3D G3DSA:3.40.640.10 160 379 6.9E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 8.3E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 6.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 6.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 PANTHER PTHR11751 107 488 2.9E-78 T 23-04-2016 NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 Gene3D G3DSA:1.10.10.10 9 82 7.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16405 93e683b25f07d04baa3d1aabd8ddb836 491 Pfam PF00155 Aminotransferase class I and II 135 481 1.4E-28 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS27430 522cd193c401755f76e1e706318bcdfd 423 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 333 411 1.1E-10 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NIAKO_RS27430 522cd193c401755f76e1e706318bcdfd 423 PANTHER PTHR30250 1 411 1.9E-30 T 23-04-2016 NIAKO_RS27430 522cd193c401755f76e1e706318bcdfd 423 Pfam PF01943 Polysaccharide biosynthesis protein 13 280 1.1E-28 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 Gene3D G3DSA:3.40.50.620 142 273 7.8E-7 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 PRINTS PR01438 Universal stress protein signature 234 246 2.5E-5 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 PRINTS PR01438 Universal stress protein signature 252 274 2.5E-5 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 PRINTS PR01438 Universal stress protein signature 1 17 2.5E-5 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 Gene3D G3DSA:3.40.50.620 1 141 8.7E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS09355 f1397926a2d83031da6d49ef6e5dad4e 275 SUPERFAMILY SSF52402 1 148 2.34E-6 T 23-04-2016 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 Gene3D G3DSA:1.10.1740.10 3 90 8.8E-24 T 23-04-2016 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 Pfam PF04542 Sigma-70 region 2 7 73 6.0E-14 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 4.1E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 Pfam PF08281 Sigma-70, region 4 98 147 1.3E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 PANTHER PTHR30173 3 155 2.7E-34 T 23-04-2016 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 SUPERFAMILY SSF88946 3 85 1.22E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 SUPERFAMILY SSF88659 90 153 8.5E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06465 317fa346f4d855892e76621a39485605 158 Gene3D G3DSA:1.10.10.10 97 152 2.0E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 Gene3D G3DSA:2.60.40.10 47 122 4.5E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 Gene3D G3DSA:2.60.120.260 123 239 6.0E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 PANTHER PTHR33307 1 904 3.7E-293 T 23-04-2016 NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 SUPERFAMILY SSF48208 439 864 7.48E-52 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 163 333 3.2E-57 T 23-04-2016 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 PIRSF PIRSF010631 1 906 0.0 T 23-04-2016 IPR016007 Alpha-L-rhamnosidase NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 Pfam PF05592 Bacterial alpha-L-rhamnosidase 342 858 1.1E-191 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 PANTHER PTHR33307:SF5 1 904 3.7E-293 T 23-04-2016 NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 SUPERFAMILY SSF49785 104 229 3.74E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS12455 55fde5112ed9795b0d4657307ae7619c 906 Gene3D G3DSA:2.60.120.260 332 445 1.1E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 SUPERFAMILY SSF53738 301 450 2.86E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Gene3D G3DSA:3.40.120.10 26 213 9.2E-62 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 45 182 8.2E-43 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Gene3D G3DSA:3.40.120.10 306 449 5.9E-39 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 PANTHER PTHR22573 23 573 2.2E-210 T 23-04-2016 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Gene3D G3DSA:3.30.310.50 475 549 5.5E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 SUPERFAMILY SSF53738 205 317 4.71E-23 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Gene3D G3DSA:3.40.120.10 227 305 8.8E-22 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 440 3.0E-23 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 502 543 2.7E-6 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 PANTHER PTHR22573:SF54 23 573 2.2E-210 T 23-04-2016 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 SUPERFAMILY SSF55957 508 546 2.88E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 SUPERFAMILY SSF55957 441 476 2.88E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 SUPERFAMILY SSF53738 32 233 1.65E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 206 314 1.3E-26 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 140 154 5.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS10870 0c99a05857fdd8580734a125f85e2686 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 SUPERFAMILY SSF52743 298 546 4.98E-66 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 SUPERFAMILY SSF52743 37 119 4.98E-66 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 72 83 - T 23-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 303 313 - T 23-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PRINTS PR00723 Subtilisin serine protease family (S8) signature 299 312 9.3E-16 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PRINTS PR00723 Subtilisin serine protease family (S8) signature 471 487 9.3E-16 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PRINTS PR00723 Subtilisin serine protease family (S8) signature 67 86 9.3E-16 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 472 482 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795:SF419 266 275 2.3E-50 T 23-04-2016 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795:SF419 302 550 2.3E-50 T 23-04-2016 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795:SF419 60 105 2.3E-50 T 23-04-2016 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795 266 275 2.3E-50 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795 302 550 2.3E-50 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 PANTHER PTHR10795 60 105 2.3E-50 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 Gene3D G3DSA:3.40.50.200 275 546 5.1E-80 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 Gene3D G3DSA:3.40.50.200 28 93 5.1E-80 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS07440 495f7e6d2ccd4418cb162a0890e24dc6 570 Pfam PF00082 Subtilase family 67 509 5.2E-46 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 PANTHER PTHR30221 6 256 9.0E-43 T 23-04-2016 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 PANTHER PTHR30221:SF7 6 256 9.0E-43 T 23-04-2016 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 Gene3D G3DSA:3.30.70.100 179 259 2.9E-7 T 23-04-2016 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 SUPERFAMILY SSF82861 23 109 1.15E-12 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 140 174 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 Gene3D G3DSA:2.30.30.60 126 175 3.1E-17 T 23-04-2016 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 SUPERFAMILY SSF50182 111 176 3.6E-18 T 23-04-2016 IPR010920 LSM domain NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 SUPERFAMILY SSF82689 179 259 6.28E-8 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 Pfam PF05552 Conserved TM helix 13 54 2.6E-7 T 23-04-2016 IPR008910 Conserved TM helix NIAKO_RS08075 5d1373a7ceb63e0ad86ccda2dd441ce5 264 Pfam PF00924 Mechanosensitive ion channel 66 260 7.4E-47 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 466 2.1E-194 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 4 467 51.489 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 Gene3D G3DSA:3.30.499.10 8 166 2.6E-23 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 Pfam PF00330 Aconitase family (aconitate hydratase) 10 458 6.0E-145 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PANTHER PTHR11670:SF12 328 467 2.3E-212 T 23-04-2016 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PANTHER PTHR11670:SF12 1 310 2.3E-212 T 23-04-2016 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 400 413 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 198 211 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 122 135 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 212 225 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 289 303 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 136 151 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 111 119 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 344 355 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PRINTS PR00415 Aconitase family signature 85 98 3.7E-44 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 Gene3D G3DSA:3.30.499.10 334 466 1.5E-55 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 Gene3D G3DSA:3.40.1060.10 169 284 9.6E-38 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 SUPERFAMILY SSF53732 5 466 2.22E-159 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PANTHER PTHR11670 328 467 2.3E-212 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13195 427eee14e56d3314b32590e7befddba5 467 PANTHER PTHR11670 1 310 2.3E-212 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 PANTHER PTHR10438 333 354 1.0E-11 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 PANTHER PTHR10438 31 136 1.0E-11 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 Pfam PF00085 Thioredoxin 36 132 2.1E-11 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 Gene3D G3DSA:3.40.30.10 29 136 2.0E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 SUPERFAMILY SSF52833 28 138 6.67E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 PANTHER PTHR10438:SF282 333 354 1.0E-11 T 23-04-2016 NIAKO_RS36640 897c7cc4cf682a124e13debe7bc42f8a 366 PANTHER PTHR10438:SF282 31 136 1.0E-11 T 23-04-2016 NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 Gene3D G3DSA:3.80.30.20 205 418 4.0E-43 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 SMART SM00729 205 416 3.2E-28 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 SUPERFAMILY SSF102114 171 423 5.1E-41 T 23-04-2016 NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 PANTHER PTHR11918 26 404 6.8E-73 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 PANTHER PTHR11918:SF64 26 404 6.8E-73 T 23-04-2016 NIAKO_RS21270 b94ca9e611a5906f4e68f186a7a13776 487 Pfam PF04055 Radical SAM superfamily 211 372 7.0E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS29545 21151addfd4a8685b623677bb32367f0 106 Pfam PF12728 Helix-turn-helix domain 51 99 8.5E-11 T 23-04-2016 NIAKO_RS29545 21151addfd4a8685b623677bb32367f0 106 Gene3D G3DSA:1.10.10.10 50 98 4.2E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29545 21151addfd4a8685b623677bb32367f0 106 SUPERFAMILY SSF46955 51 99 1.34E-8 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS15815 3ab9dc35ca46f7b265bafff830fe500c 315 SUPERFAMILY SSF51735 4 279 8.35E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS15815 3ab9dc35ca46f7b265bafff830fe500c 315 PANTHER PTHR14194 4 304 6.0E-68 T 23-04-2016 NIAKO_RS15815 3ab9dc35ca46f7b265bafff830fe500c 315 Pfam PF05368 NmrA-like family 9 242 2.6E-47 T 23-04-2016 IPR008030 NmrA-like domain NIAKO_RS15815 3ab9dc35ca46f7b265bafff830fe500c 315 PANTHER PTHR14194:SF46 4 304 6.0E-68 T 23-04-2016 NIAKO_RS15815 3ab9dc35ca46f7b265bafff830fe500c 315 Gene3D G3DSA:3.40.50.720 5 237 5.1E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 SUPERFAMILY SSF53474 35 322 2.52E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PANTHER PTHR10992:SF764 40 169 1.2E-62 T 23-04-2016 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PANTHER PTHR10992:SF764 185 326 1.2E-62 T 23-04-2016 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 Pfam PF00561 alpha/beta hydrolase fold 55 183 2.7E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 Gene3D G3DSA:3.40.50.1820 35 322 1.2E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PRINTS PR00412 Epoxide hydrolase signature 142 155 4.7E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PRINTS PR00412 Epoxide hydrolase signature 80 95 4.7E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PRINTS PR00412 Epoxide hydrolase signature 128 141 4.7E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PRINTS PR00412 Epoxide hydrolase signature 301 323 4.7E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PRINTS PR00412 Epoxide hydrolase signature 60 78 4.7E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PANTHER PTHR10992 40 169 1.2E-62 T 23-04-2016 NIAKO_RS07035 78fbf953bdfe6898ac86289e24a0dd97 328 PANTHER PTHR10992 185 326 1.2E-62 T 23-04-2016 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 SUPERFAMILY SSF103481 35 136 1.83E-6 T 23-04-2016 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 Pfam PF00892 EamA-like transporter family 141 279 9.4E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 Pfam PF00892 EamA-like transporter family 10 133 5.5E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 PANTHER PTHR22911 1 290 1.0E-67 T 23-04-2016 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 PANTHER PTHR22911:SF71 1 290 1.0E-67 T 23-04-2016 NIAKO_RS21670 6afdddc33a76bce2a2bb498d52ae7f1a 291 SUPERFAMILY SSF103481 186 282 6.02E-7 T 23-04-2016 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 Gene3D G3DSA:1.20.1600.10 30 438 9.1E-72 T 23-04-2016 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 PANTHER PTHR30026 28 438 1.4E-53 T 23-04-2016 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 SUPERFAMILY SSF56954 2 440 8.76E-78 T 23-04-2016 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 Pfam PF02321 Outer membrane efflux protein 250 436 3.4E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 Pfam PF02321 Outer membrane efflux protein 33 223 2.3E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS33000 23dd876bc54cfeadba546b0f910b6d10 443 PANTHER PTHR30026:SF4 28 438 1.4E-53 T 23-04-2016 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 PANTHER PTHR30572:SF4 269 364 1.4E-74 T 23-04-2016 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 PANTHER PTHR30572:SF4 421 803 1.4E-74 T 23-04-2016 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 PANTHER PTHR30572 269 364 1.4E-74 T 23-04-2016 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 PANTHER PTHR30572 421 803 1.4E-74 T 23-04-2016 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 Pfam PF02687 FtsX-like permease family 683 791 1.1E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 Pfam PF02687 FtsX-like permease family 298 414 4.5E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 Pfam PF12704 MacB-like periplasmic core domain 467 607 1.3E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05920 ea9011988535e713e182de47d500d870 803 Pfam PF12704 MacB-like periplasmic core domain 20 245 2.7E-17 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS28530 22c2ab2a1bdc58317859112334f18076 517 Gene3D G3DSA:2.40.50.140 31 148 6.1E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS28530 22c2ab2a1bdc58317859112334f18076 517 SUPERFAMILY SSF50249 39 148 4.43E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS28530 22c2ab2a1bdc58317859112334f18076 517 PANTHER PTHR30001 3 515 1.8E-161 T 23-04-2016 NIAKO_RS28530 22c2ab2a1bdc58317859112334f18076 517 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 15 444 2.1E-136 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 NIAKO_RS28530 22c2ab2a1bdc58317859112334f18076 517 Pfam PF10150 Ribonuclease E/G family 144 413 4.0E-101 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 Pfam PF02321 Outer membrane efflux protein 24 239 5.1E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 Pfam PF02321 Outer membrane efflux protein 270 440 5.0E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 PANTHER PTHR30203 23 440 1.4E-28 T 23-04-2016 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 Gene3D G3DSA:1.20.1600.10 17 441 1.5E-53 T 23-04-2016 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 SUPERFAMILY SSF56954 111 441 3.01E-57 T 23-04-2016 NIAKO_RS16350 4ae06b276fb41e876f8bf7d7cc0dc2d2 450 SUPERFAMILY SSF56954 2 74 3.01E-57 T 23-04-2016 NIAKO_RS13855 c91c3ed2dc2babf4d7ee2f871f67beeb 511 Pfam PF14322 Starch-binding associating with outer membrane 28 228 5.9E-19 T 23-04-2016 NIAKO_RS13855 c91c3ed2dc2babf4d7ee2f871f67beeb 511 Pfam PF07980 SusD family 344 509 3.8E-34 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13855 c91c3ed2dc2babf4d7ee2f871f67beeb 511 Gene3D G3DSA:1.25.40.10 208 310 6.0E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13855 c91c3ed2dc2babf4d7ee2f871f67beeb 511 Gene3D G3DSA:1.25.40.10 347 444 6.0E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13855 c91c3ed2dc2babf4d7ee2f871f67beeb 511 SUPERFAMILY SSF48452 19 509 1.47E-100 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10725 994efcf20abc2892af95a89f46775d27 434 PANTHER PTHR30589 142 288 1.0E-31 T 23-04-2016 NIAKO_RS10725 994efcf20abc2892af95a89f46775d27 434 PANTHER PTHR30589 342 427 1.0E-31 T 23-04-2016 NIAKO_RS10725 994efcf20abc2892af95a89f46775d27 434 PANTHER PTHR30589:SF0 142 288 1.0E-31 T 23-04-2016 NIAKO_RS10725 994efcf20abc2892af95a89f46775d27 434 PANTHER PTHR30589:SF0 342 427 1.0E-31 T 23-04-2016 NIAKO_RS10725 994efcf20abc2892af95a89f46775d27 434 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 145 420 1.1E-37 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 PANTHER PTHR11061 4 390 8.0E-104 T 23-04-2016 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 SUPERFAMILY SSF88697 1 71 9.45E-17 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 Gene3D G3DSA:2.30.130.10 1 71 3.5E-24 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 351 7.2E-26 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 PANTHER PTHR11061:SF12 4 390 8.0E-104 T 23-04-2016 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 Gene3D G3DSA:3.30.750.80 73 172 1.2E-33 T 23-04-2016 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 SMART SM00359 2 87 6.6E-14 T 23-04-2016 IPR002478 PUA domain GO:0003723 NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 SUPERFAMILY SSF53335 79 386 2.56E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27050 13df8f1add482d49da8e0e9c71a7ae35 390 Gene3D G3DSA:3.40.50.150 178 389 2.8E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 Pfam PF00593 TonB dependent receptor 548 813 4.5E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 Gene3D G3DSA:2.170.130.10 168 248 7.3E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 SUPERFAMILY SSF49464 44 132 3.14E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 Pfam PF13715 CarboxypepD_reg-like domain 44 130 4.0E-15 T 23-04-2016 NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 SUPERFAMILY SSF56935 167 829 3.66E-49 T 23-04-2016 NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 Gene3D G3DSA:2.60.40.1120 44 136 7.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01730 f2a2d0337830cfe6aec4536618e933e4 843 Pfam PF07715 TonB-dependent Receptor Plug Domain 166 234 1.8E-6 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 PANTHER PTHR30173:SF20 19 175 4.5E-40 T 23-04-2016 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 SUPERFAMILY SSF88659 108 176 5.56E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 Pfam PF04542 Sigma-70 region 2 26 93 1.3E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 Gene3D G3DSA:1.10.1740.10 10 113 1.9E-17 T 23-04-2016 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 PANTHER PTHR30173 19 175 4.5E-40 T 23-04-2016 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 Pfam PF08281 Sigma-70, region 4 124 174 3.2E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 175 3.0E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 Gene3D G3DSA:1.10.10.10 117 175 4.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 175 1.6E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30075 ae6604c9ba28a827205b74f7a4de44ea 189 SUPERFAMILY SSF88946 5 109 2.31E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 PANTHER PTHR30173 2 184 2.0E-33 T 23-04-2016 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 Pfam PF08281 Sigma-70, region 4 130 177 1.4E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 Pfam PF04542 Sigma-70 region 2 31 96 1.8E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 Gene3D G3DSA:1.10.10.10 128 184 2.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 PANTHER PTHR30173:SF20 2 184 2.0E-33 T 23-04-2016 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 184 5.1E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 SUPERFAMILY SSF88659 117 184 1.87E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 Gene3D G3DSA:1.10.1740.10 9 105 1.1E-21 T 23-04-2016 NIAKO_RS18435 e023011a5cbf6980ef62740eea21e5ae 191 SUPERFAMILY SSF88946 9 102 8.32E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PANTHER PTHR10804 1 248 5.3E-104 T 23-04-2016 NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 248 1.0E-86 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 SUPERFAMILY SSF55920 1 248 2.62E-77 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.8E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.8E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.8E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.8E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 37.895 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 Pfam PF00557 Metallopeptidase family M24 12 239 4.5E-46 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 Gene3D G3DSA:3.90.230.10 2 250 2.5E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS22895 44f8ec3aa0f64605ed7849d11d68e534 266 PANTHER PTHR10804:SF41 1 248 5.3E-104 T 23-04-2016 NIAKO_RS24095 5eba6735c82aeffaa33e8de0cf23ec87 137 PANTHER PTHR22911 1 136 7.0E-25 T 23-04-2016 NIAKO_RS24095 5eba6735c82aeffaa33e8de0cf23ec87 137 SUPERFAMILY SSF103481 60 136 6.93E-15 T 23-04-2016 NIAKO_RS24095 5eba6735c82aeffaa33e8de0cf23ec87 137 Pfam PF00892 EamA-like transporter family 2 136 3.7E-21 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 PANTHER PTHR30173:SF20 7 192 3.3E-29 T 23-04-2016 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 Pfam PF08281 Sigma-70, region 4 124 176 1.6E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 SUPERFAMILY SSF88659 111 177 1.44E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 Pfam PF04542 Sigma-70 region 2 35 83 1.8E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 SUPERFAMILY SSF88946 3 87 1.84E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 PANTHER PTHR30173 7 192 3.3E-29 T 23-04-2016 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 Gene3D G3DSA:1.10.1740.10 7 83 9.4E-19 T 23-04-2016 NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 Gene3D G3DSA:1.10.10.10 118 178 5.5E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24375 b83c6b1f5c3372e995eb364a301fcfdb 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 178 8.4E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32320 56df5883824067fa19b3f952a7e5aab5 257 Pfam PF09674 Protein of unknown function (DUF2400) 26 253 1.1E-87 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 NIAKO_RS32320 56df5883824067fa19b3f952a7e5aab5 257 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 22 253 3.7E-65 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 Gene3D G3DSA:1.20.1250.20 219 400 6.0E-27 T 23-04-2016 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 PANTHER PTHR23517:SF4 14 398 1.5E-44 T 23-04-2016 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 PANTHER PTHR23517 14 398 1.5E-44 T 23-04-2016 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 Gene3D G3DSA:1.20.1250.20 13 200 2.3E-26 T 23-04-2016 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 Pfam PF07690 Major Facilitator Superfamily 34 222 1.5E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 Pfam PF07690 Major Facilitator Superfamily 231 400 9.6E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS15590 b4f1c1f717dc5273da735d7e7f1bb208 401 SUPERFAMILY SSF103473 10 398 1.96E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS11800 231ccb3bdfea0a5249aa1529e8353223 106 Gene3D G3DSA:1.10.150.20 31 88 2.0E-7 T 23-04-2016 NIAKO_RS11800 231ccb3bdfea0a5249aa1529e8353223 106 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 29 86 7.2E-8 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS11800 231ccb3bdfea0a5249aa1529e8353223 106 SUPERFAMILY SSF47789 28 89 6.67E-7 T 23-04-2016 NIAKO_RS01470 934aed1377b370a3e8951b709f40b824 324 PANTHER PTHR30353 113 317 5.8E-56 T 23-04-2016 IPR032818 DedA family NIAKO_RS01470 934aed1377b370a3e8951b709f40b824 324 Pfam PF09335 SNARE associated Golgi protein 134 274 2.7E-17 T 23-04-2016 IPR032816 SNARE associated Golgi protein NIAKO_RS01470 934aed1377b370a3e8951b709f40b824 324 PANTHER PTHR30353:SF0 113 317 5.8E-56 T 23-04-2016 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 SMART SM00862 150 225 1.3E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 PANTHER PTHR26402 4 229 1.4E-92 T 23-04-2016 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 SMART SM00448 4 115 2.5E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 Gene3D G3DSA:3.40.50.2300 2 121 4.4E-41 T 23-04-2016 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 Pfam PF00072 Response regulator receiver domain 6 115 6.7E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.5E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 PANTHER PTHR26402:SF316 4 229 1.4E-92 T 23-04-2016 NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 Gene3D G3DSA:1.10.10.10 130 227 5.7E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28665 43a96b22dd02f05651704e343b97c3b9 229 SUPERFAMILY SSF52172 1 172 1.29E-42 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 32.658 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 6.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 6.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 6.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 6.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Pfam PF00231 ATP synthase 4 291 2.3E-90 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 291 5.0E-94 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 PANTHER PTHR11693 1 293 1.0E-107 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Gene3D G3DSA:1.10.287.80 240 286 2.4E-27 T 23-04-2016 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 SUPERFAMILY SSF52943 4 291 9.42E-83 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Gene3D G3DSA:1.10.287.80 206 239 2.6E-31 T 23-04-2016 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Gene3D G3DSA:1.10.287.80 20 61 2.6E-31 T 23-04-2016 NIAKO_RS25915 ab06aa8660ff03024c3b8e3991dc6099 293 Gene3D G3DSA:3.40.1380.10 69 196 1.5E-39 T 23-04-2016 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 Gene3D G3DSA:1.10.357.10 8 183 1.3E-38 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.6E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.6E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 SUPERFAMILY SSF48498 84 178 1.41E-7 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 PANTHER PTHR30055 11 190 2.3E-28 T 23-04-2016 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 SUPERFAMILY SSF46689 7 84 1.1E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21935 c86e7567ba4bbb0a7134aa3cccd93b8c 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 6.5E-17 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS02770 48444a612fb3de9607872acab2beef9d 390 Gene3D G3DSA:2.120.10.10 34 382 5.0E-100 T 23-04-2016 IPR011040 Sialidases NIAKO_RS02770 48444a612fb3de9607872acab2beef9d 390 PANTHER PTHR10628:SF5 43 387 5.7E-87 T 23-04-2016 NIAKO_RS02770 48444a612fb3de9607872acab2beef9d 390 PANTHER PTHR10628 43 387 5.7E-87 T 23-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS02770 48444a612fb3de9607872acab2beef9d 390 Pfam PF13088 BNR repeat-like domain 58 363 8.8E-43 T 23-04-2016 IPR011040 Sialidases NIAKO_RS02770 48444a612fb3de9607872acab2beef9d 390 SUPERFAMILY SSF50939 35 382 7.57E-106 T 23-04-2016 IPR011040 Sialidases NIAKO_RS20885 ad40914f8379880c1f2c2ab8aeac07b2 325 Gene3D G3DSA:2.120.10.60 204 316 3.3E-4 T 23-04-2016 NIAKO_RS20885 ad40914f8379880c1f2c2ab8aeac07b2 325 Gene3D G3DSA:2.120.10.60 78 136 3.3E-4 T 23-04-2016 NIAKO_RS20885 ad40914f8379880c1f2c2ab8aeac07b2 325 SUPERFAMILY SSF75011 67 231 8.76E-8 T 23-04-2016 NIAKO_RS20885 ad40914f8379880c1f2c2ab8aeac07b2 325 SUPERFAMILY SSF75011 267 319 8.76E-8 T 23-04-2016 NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 324 4.2E-80 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 PANTHER PTHR18866:SF74 163 329 4.6E-26 T 23-04-2016 NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 Gene3D G3DSA:2.40.100.10 243 306 7.9E-5 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 SUPERFAMILY SSF50891 194 302 1.21E-7 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 SMART SM00797 24 313 1.5E-102 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 Pfam PF02626 Allophanate hydrolase subunit 2 25 295 1.1E-81 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NIAKO_RS07945 c240fdafd45baf7e2d6b25de673d3290 330 PANTHER PTHR18866 163 329 4.6E-26 T 23-04-2016 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 243 2.7E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Gene3D G3DSA:2.60.40.1120 27 100 3.8E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Pfam PF00593 TonB dependent receptor 571 874 8.9E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 SUPERFAMILY SSF56935 108 314 9.52E-80 T 23-04-2016 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 SUPERFAMILY SSF56935 344 849 9.52E-80 T 23-04-2016 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Pfam PF13715 CarboxypepD_reg-like domain 27 111 1.8E-15 T 23-04-2016 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 PANTHER PTHR30069 106 862 7.2E-70 T 23-04-2016 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Gene3D G3DSA:2.170.130.10 124 246 1.9E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 SUPERFAMILY SSF49464 27 114 4.71E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 Gene3D G3DSA:2.40.170.20 247 903 3.3E-73 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16900 532c3beff156901a2c55943fca9abb2e 904 PANTHER PTHR30069:SF4 106 862 7.2E-70 T 23-04-2016 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 SUPERFAMILY SSF48208 262 703 1.09E-86 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 31 219 9.5E-54 T 23-04-2016 IPR032856 Putative glycogen debranching enzyme, N-terminal NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 Pfam PF06202 Amylo-alpha-1,6-glucosidase 287 654 2.5E-13 T 23-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 PANTHER PTHR10569:SF1 354 671 1.0E-133 T 23-04-2016 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 PANTHER PTHR10569:SF1 258 334 1.0E-133 T 23-04-2016 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 PANTHER PTHR10569 354 671 1.0E-133 T 23-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 PANTHER PTHR10569 258 334 1.0E-133 T 23-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS03470 d5f40a12d0ec7d94983a42367c590818 727 Gene3D G3DSA:1.50.10.10 299 659 7.5E-6 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 8.7E-27 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PRINTS PR00149 Fumarate lyase superfamily signature 291 318 8.7E-27 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PRINTS PR00149 Fumarate lyase superfamily signature 337 353 8.7E-27 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PRINTS PR00149 Fumarate lyase superfamily signature 200 218 8.7E-27 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 Pfam PF10415 Fumarase C C-terminus 428 481 3.0E-18 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 Pfam PF00206 Lyase 31 362 2.2E-95 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 Gene3D G3DSA:1.20.200.10 160 422 1.6E-75 T 23-04-2016 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PANTHER PTHR11444:SF25 11 480 4.0E-214 T 23-04-2016 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 ProSitePatterns PS00163 Fumarate lyases signature. 337 346 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 SUPERFAMILY SSF48557 23 480 7.7E-129 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 Gene3D G3DSA:1.10.40.30 428 483 5.1E-18 T 23-04-2016 NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 Gene3D G3DSA:1.10.275.10 22 159 2.6E-53 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS10475 b7df72377c7762e34ad2e3a5d22a6d5b 484 PANTHER PTHR11444 11 480 4.0E-214 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Pfam PF08676 MutL C terminal dimerisation domain 454 595 6.2E-27 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 SMART SM01340 209 327 6.7E-50 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 635 23.439 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 9.2E-36 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 SUPERFAMILY SSF54211 192 327 3.45E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 SUPERFAMILY SSF55874 5 202 3.67E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 132 1.1E-12 T 23-04-2016 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 306 2.1E-91 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 PANTHER PTHR10073 5 338 1.6E-128 T 23-04-2016 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Gene3D G3DSA:3.30.230.10 205 326 1.8E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 SMART SM00853 453 595 5.3E-28 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 SUPERFAMILY SSF118116 452 637 1.7E-37 T 23-04-2016 NIAKO_RS32675 8904b1cf2bb955959284daa0c84defef 637 Gene3D G3DSA:3.30.565.10 5 204 2.1E-68 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 187 5.1E-65 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 PANTHER PTHR20982 2 187 2.6E-74 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 Gene3D G3DSA:1.10.132.20 69 187 1.4E-41 T 23-04-2016 IPR023584 Ribosome recycling factor domain NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 SUPERFAMILY SSF55194 6 186 6.15E-68 T 23-04-2016 IPR023584 Ribosome recycling factor domain NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 Hamap MF_00040 Ribosome-recycling factor [frr]. 6 187 25.616 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NIAKO_RS28100 680c61f4157791701b3e5c368d36b5a5 187 Pfam PF01765 Ribosome recycling factor 23 185 3.6E-60 T 23-04-2016 IPR023584 Ribosome recycling factor domain NIAKO_RS08615 df96d52ec802e765008f33994e126a13 250 Pfam PF06283 Trehalose utilisation 33 243 2.1E-24 T 23-04-2016 IPR029010 ThuA-like domain NIAKO_RS08615 df96d52ec802e765008f33994e126a13 250 SUPERFAMILY SSF52317 31 247 2.52E-35 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS08615 df96d52ec802e765008f33994e126a13 250 Gene3D G3DSA:3.40.50.880 28 249 1.6E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 PANTHER PTHR14226:SF37 21 119 6.5E-63 T 23-04-2016 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 PANTHER PTHR14226:SF37 136 456 6.5E-63 T 23-04-2016 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 PANTHER PTHR14226 21 119 6.5E-63 T 23-04-2016 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 PANTHER PTHR14226 136 456 6.5E-63 T 23-04-2016 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 Pfam PF01734 Patatin-like phospholipase 37 224 1.8E-26 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 Gene3D G3DSA:3.40.1090.10 37 222 8.0E-9 T 23-04-2016 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 SUPERFAMILY SSF52151 31 103 2.88E-45 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS10810 3885abdbe1bad27eaf68d22451c1183a 750 SUPERFAMILY SSF52151 131 246 2.88E-45 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS03195 7eb81d9ca0c6ffea6483f11259231cc0 163 Gene3D G3DSA:3.40.630.30 1 161 7.8E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03195 7eb81d9ca0c6ffea6483f11259231cc0 163 Pfam PF00583 Acetyltransferase (GNAT) family 58 136 1.6E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS03195 7eb81d9ca0c6ffea6483f11259231cc0 163 SUPERFAMILY SSF55729 28 142 4.97E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03195 7eb81d9ca0c6ffea6483f11259231cc0 163 PANTHER PTHR13947 32 163 7.1E-25 T 23-04-2016 NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 9.4E-9 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 83 113 0.0031 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 Gene3D G3DSA:2.160.10.10 7 190 1.6E-54 T 23-04-2016 NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 SUPERFAMILY SSF51161 39 190 6.93E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 PANTHER PTHR23416 10 191 1.3E-49 T 23-04-2016 NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 145 173 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS23895 39961785b50c96750b020cb0e293e710 191 PANTHER PTHR23416:SF53 10 191 1.3E-49 T 23-04-2016 NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 1218 1298 1.9E-10 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 301 378 0.011 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 50 129 3.1E-14 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 969 1048 6.2E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 632 715 1.8E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 552 631 4.7E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 219 300 1.3E-9 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 1125 1216 0.16 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 380 462 2.6E-14 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 133 215 2.5E-16 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 797 883 1.4E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 716 796 0.098 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 468 548 2.2E-7 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SMART SM00089 890 966 3.5E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 43 131 1.31E-22 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 227 286 9.6E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 58 116 2.6E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 386 448 3.1E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 491 530 3.4E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 1224 1286 1.8E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 639 700 1.3E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 563 615 2.8E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF00801 PKD domain 138 199 1.5E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 767 881 2.22E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 1043 1118 5.23E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 717 795 2.35E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 55 131 1.6E-22 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 379 463 6.4E-19 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 889 969 1.1E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 976 1050 2.2E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 1226 1297 1.3E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 1051 1118 2.0E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 464 550 4.5E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 132 213 2.2E-24 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 304 378 1.5E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 630 713 2.4E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 551 629 1.7E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 889 964 8.24E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 220 299 4.32E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 544 631 5.62E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 1139 1214 2.09E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1383 1476 7.1E-12 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 639 712 8.76E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 225 296 2.6E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 1139 1213 1.0E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Gene3D G3DSA:2.60.40.670 799 880 1.5E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 PANTHER PTHR13833:SF44 55 139 1.3E-19 T 23-04-2016 NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 968 1049 1.7E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 128 211 1.1E-22 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 309 375 1.2E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 1225 1298 6.28E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 361 455 6.41E-19 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 PANTHER PTHR13833 55 139 1.3E-19 T 23-04-2016 NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 SUPERFAMILY SSF49299 457 538 1.44E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27015 5fc6a876ef9f3daa09677cdc10b7b1fd 1476 Pfam PF13585 C-terminal domain of CHU protein family 1382 1472 2.2E-19 T 23-04-2016 NIAKO_RS34520 68fb961476f6ac6b99827bda01d1e01b 381 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 315 381 2.9E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS07360 441a9d91ac34d3904b3079dc96b024b2 334 Pfam PF11751 Protein of unknown function (DUF3308) 21 315 5.7E-47 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS07360 441a9d91ac34d3904b3079dc96b024b2 334 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 8 315 1.1E-55 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 Gene3D G3DSA:3.30.70.141 3 134 9.3E-53 T 23-04-2016 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PANTHER PTHR11349 4 132 1.7E-57 T 23-04-2016 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 Pfam PF00334 Nucleoside diphosphate kinase 3 133 3.3E-48 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 1.4E-29 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 1.4E-29 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 1.4E-29 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 1.4E-29 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 1.4E-29 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 SMART SM00562 2 136 3.7E-66 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 138 30.138 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09925 203832751801248c0f8ca40397ae0a14 138 SUPERFAMILY SSF54919 3 136 1.1E-51 T 23-04-2016 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 SUPERFAMILY SSF55874 16 221 6.85E-69 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Pfam PF01751 Toprim domain 438 554 5.3E-19 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 441 449 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 649 2.9E-30 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 658 1.2E-286 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 510 526 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 528 545 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 439 453 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 592 608 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 45 60 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 287 300 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 80 93 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 123 137 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR00418 DNA topoisomerase II family signature 548 560 1.6E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 261 279 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 489 498 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 393 413 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 190 205 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 235 257 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 379 393 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 331 347 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 613 625 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 629 645 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 16 26 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PRINTS PR01159 DNA gyrase subunit B signature 205 218 5.9E-65 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Gene3D G3DSA:3.30.565.10 16 224 5.9E-89 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 SUPERFAMILY SSF54211 236 410 1.56E-56 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 659 86.117 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 PANTHER PTHR10169 1 656 7.3E-286 T 23-04-2016 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 SMART SM00433 45 653 0.0 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 184 1.3E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Pfam PF00204 DNA gyrase B 236 409 2.5E-62 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Gene3D G3DSA:3.30.230.10 235 410 3.0E-68 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 SUPERFAMILY SSF56719 413 653 2.88E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 SMART SM00387 41 185 3.3E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28355 285725dbf9642346948995afbc8437f4 659 Gene3D G3DSA:3.40.50.670 423 641 7.4E-93 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 SUPERFAMILY SSF46689 249 295 3.49E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 SMART SM00342 209 293 2.3E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 Pfam PF12833 Helix-turn-helix domain 217 294 2.5E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 Gene3D G3DSA:1.10.10.60 248 295 1.7E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 PANTHER PTHR11019:SF80 56 294 4.4E-19 T 23-04-2016 NIAKO_RS19080 fd1e699f9d8502d64221eed4725a63b0 297 PANTHER PTHR11019 56 294 4.4E-19 T 23-04-2016 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 SMART SM01160 44 163 0.0078 T 23-04-2016 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 Gene3D G3DSA:1.20.1540.10 12 225 6.0E-42 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 PANTHER PTHR22936 145 230 2.2E-33 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 PANTHER PTHR22936 11 111 2.2E-33 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 Pfam PF01694 Rhomboid family 51 226 1.7E-32 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 SUPERFAMILY SSF144091 143 229 8.63E-42 T 23-04-2016 NIAKO_RS29885 3cd7b82ce4ed4bface6a3c429c747d2e 233 SUPERFAMILY SSF144091 10 113 8.63E-42 T 23-04-2016 NIAKO_RS26260 f3572c53ac6061376d64535316010ea5 387 SUPERFAMILY SSF53756 21 384 3.45E-75 T 23-04-2016 NIAKO_RS26260 f3572c53ac6061376d64535316010ea5 387 PANTHER PTHR12526 28 385 2.8E-58 T 23-04-2016 NIAKO_RS26260 f3572c53ac6061376d64535316010ea5 387 Gene3D G3DSA:3.40.50.2000 176 362 8.0E-27 T 23-04-2016 NIAKO_RS26260 f3572c53ac6061376d64535316010ea5 387 Pfam PF00534 Glycosyl transferases group 1 201 362 6.0E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS26260 f3572c53ac6061376d64535316010ea5 387 Pfam PF13439 Glycosyltransferase Family 4 31 186 3.4E-19 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS22315 a6b7f306838f6f67bb468239ff1fdd22 449 Pfam PF14135 Domain of unknown function (DUF4302) 22 257 6.2E-60 T 23-04-2016 IPR025396 Protein of unknown function DUF4302 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 Gene3D G3DSA:1.10.560.10 6 188 1.8E-46 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 1.7E-259 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 SUPERFAMILY SSF54849 140 197 1.89E-16 T 23-04-2016 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PRINTS PR00298 60kDa chaperonin signature 26 52 4.09E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PRINTS PR00298 60kDa chaperonin signature 398 419 4.09E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PRINTS PR00298 60kDa chaperonin signature 82 109 4.09E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PRINTS PR00298 60kDa chaperonin signature 268 291 4.09E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PRINTS PR00298 60kDa chaperonin signature 350 375 4.09E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 PANTHER PTHR11353 1 543 8.6E-247 T 23-04-2016 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 Gene3D G3DSA:3.50.7.10 189 366 1.5E-98 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 1.1E-100 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 SUPERFAMILY SSF48592 6 133 7.41E-77 T 23-04-2016 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 SUPERFAMILY SSF48592 406 521 7.41E-77 T 23-04-2016 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 SUPERFAMILY SSF52029 184 376 2.07E-83 T 23-04-2016 IPR027409 GroEL-like apical domain NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 Gene3D G3DSA:1.10.560.10 367 518 7.8E-41 T 23-04-2016 IPR027413 GroEL-like equatorial domain NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NIAKO_RS04980 8e51bea141a5894c05bab7407a82b44a 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.589 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NIAKO_RS35640 88827a52b675c7bde2da3f6bff568e8f 233 PANTHER PTHR13887 1 210 2.3E-51 T 23-04-2016 NIAKO_RS35640 88827a52b675c7bde2da3f6bff568e8f 233 SUPERFAMILY SSF52833 1 207 4.17E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS35640 88827a52b675c7bde2da3f6bff568e8f 233 PANTHER PTHR13887:SF10 1 210 2.3E-51 T 23-04-2016 NIAKO_RS35640 88827a52b675c7bde2da3f6bff568e8f 233 Pfam PF01323 DSBA-like thioredoxin domain 2 204 5.8E-48 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 NIAKO_RS35640 88827a52b675c7bde2da3f6bff568e8f 233 Gene3D G3DSA:3.40.30.10 1 206 5.5E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS28675 fcbc7ddf6a0e7d54c2628ab914c83985 115 Gene3D G3DSA:3.40.50.2300 3 93 4.6E-17 T 23-04-2016 NIAKO_RS28675 fcbc7ddf6a0e7d54c2628ab914c83985 115 SMART SM00448 6 114 6.3E-4 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28675 fcbc7ddf6a0e7d54c2628ab914c83985 115 PANTHER PTHR26402 6 110 7.6E-13 T 23-04-2016 NIAKO_RS28675 fcbc7ddf6a0e7d54c2628ab914c83985 115 Pfam PF00072 Response regulator receiver domain 8 89 1.8E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28675 fcbc7ddf6a0e7d54c2628ab914c83985 115 SUPERFAMILY SSF52172 5 110 6.26E-19 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20390 4a926249ee517263665a48e33ef7fcbc 484 Pfam PF02321 Outer membrane efflux protein 71 254 2.0E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS20390 4a926249ee517263665a48e33ef7fcbc 484 Pfam PF02321 Outer membrane efflux protein 286 464 5.7E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS20390 4a926249ee517263665a48e33ef7fcbc 484 PANTHER PTHR30026 1 468 3.3E-14 T 23-04-2016 NIAKO_RS20390 4a926249ee517263665a48e33ef7fcbc 484 SUPERFAMILY SSF56954 17 464 5.75E-42 T 23-04-2016 NIAKO_RS20390 4a926249ee517263665a48e33ef7fcbc 484 Gene3D G3DSA:1.20.1600.10 71 465 1.5E-36 T 23-04-2016 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 PANTHER PTHR30559 1 355 4.2E-211 T 23-04-2016 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 95 107 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 PANTHER PTHR30559:SF0 1 355 4.2E-211 T 23-04-2016 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 11 353 3.0E-103 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 PIRSF PIRSF001359 9 354 7.1E-86 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 Gene3D G3DSA:3.20.20.70 7 353 1.2E-115 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 14 353 3.2E-86 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 SUPERFAMILY SSF51569 3 353 4.4E-123 T 23-04-2016 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 167 178 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NIAKO_RS22215 7f88164d89da2e1c894544289946ec72 355 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 353 2.8E-160 T 23-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 PANTHER PTHR22939 168 450 2.9E-38 T 23-04-2016 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 Gene3D G3DSA:2.30.42.10 108 207 1.6E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 PANTHER PTHR22939:SF78 168 450 2.9E-38 T 23-04-2016 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 Pfam PF02163 Peptidase family M50 19 435 5.8E-61 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 SUPERFAMILY SSF50156 114 207 1.24E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 20 448 1.3E-61 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 SUPERFAMILY SSF50156 229 300 3.81E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS02850 2f01141b53e1fca13189b9a8ec68820b 452 Gene3D G3DSA:2.30.42.10 230 298 4.2E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 Gene3D G3DSA:1.20.1250.20 19 193 6.8E-14 T 23-04-2016 NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 Pfam PF07690 Major Facilitator Superfamily 23 325 1.1E-14 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 SUPERFAMILY SSF103473 17 379 4.97E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 Gene3D G3DSA:1.20.1250.20 209 378 4.9E-12 T 23-04-2016 NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 PANTHER PTHR23514:SF13 14 380 3.4E-113 T 23-04-2016 NIAKO_RS21515 fed160aad5f2592a249815fd0d260a8e 384 PANTHER PTHR23514 14 380 3.4E-113 T 23-04-2016 NIAKO_RS14150 cf5c0054413c56eac70a0ee4561be1d9 121 PANTHER PTHR33204 1 119 2.6E-43 T 23-04-2016 NIAKO_RS14150 cf5c0054413c56eac70a0ee4561be1d9 121 Pfam PF01638 HxlR-like helix-turn-helix 23 111 1.0E-28 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS14150 cf5c0054413c56eac70a0ee4561be1d9 121 PANTHER PTHR33204:SF15 1 119 2.6E-43 T 23-04-2016 NIAKO_RS14150 cf5c0054413c56eac70a0ee4561be1d9 121 SUPERFAMILY SSF46785 12 119 1.51E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS14150 cf5c0054413c56eac70a0ee4561be1d9 121 Gene3D G3DSA:1.10.10.10 10 119 1.1E-42 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05585 4d697264ef25178f9435e8c0341080b4 158 Pfam PF14059 Domain of unknown function (DUF4251) 24 154 9.9E-41 T 23-04-2016 IPR025347 Protein of unknown function DUF4251 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 SUPERFAMILY SSF48008 92 220 1.46E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 Gene3D G3DSA:1.10.10.10 8 76 6.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 SUPERFAMILY SSF46785 2 78 3.11E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 Pfam PF07729 FCD domain 98 213 9.2E-23 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 5.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 5.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 SMART SM00345 15 74 5.2E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.1E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 PANTHER PTHR11751:SF342 1 111 1.1E-25 T 23-04-2016 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 Gene3D G3DSA:1.20.120.530 90 218 2.9E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 PANTHER PTHR11751 1 111 1.1E-25 T 23-04-2016 NIAKO_RS06930 96c635f349b9061f8df9529a25d24141 222 SMART SM00895 95 219 1.6E-16 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS32605 682bfb6894e6870c3228bc00a2d11ef4 167 Pfam PF14109 GldH lipoprotein 29 160 4.9E-34 T 23-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH NIAKO_RS32605 682bfb6894e6870c3228bc00a2d11ef4 167 TIGRFAM TIGR03511 GldH_lipo: gliding motility-associated lipoprotein GldH 11 162 3.2E-27 T 23-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 Gene3D G3DSA:3.30.565.10 1096 1257 1.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 SUPERFAMILY SSF55874 1106 1256 1.96E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1150 1255 1.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1206 1216 2.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1217 1235 2.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1188 1202 2.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1241 1254 2.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 Gene3D G3DSA:1.10.287.130 1034 1095 1.6E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PANTHER PTHR24423 1 14 2.0E-48 T 23-04-2016 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 PANTHER PTHR24423 971 1255 2.0E-48 T 23-04-2016 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 SMART SM00388 1039 1110 1.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1040 1109 1.7E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 SUPERFAMILY SSF47384 1016 1110 1.18E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02805 b4caa0e56bb111e9962bc8a67a51ce78 1259 SMART SM00387 1149 1257 5.3E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 Pfam PF05592 Bacterial alpha-L-rhamnosidase 377 888 7.0E-140 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 PANTHER PTHR33307:SF5 1 910 5.8E-240 T 23-04-2016 NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 197 366 2.1E-56 T 23-04-2016 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 SUPERFAMILY SSF48208 503 893 2.21E-34 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 PANTHER PTHR33307 1 910 5.8E-240 T 23-04-2016 NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 PIRSF PIRSF010631 1 936 4.2E-265 T 23-04-2016 IPR016007 Alpha-L-rhamnosidase NIAKO_RS17970 cb06e7b976134329a9b11616e4d788b8 937 Gene3D G3DSA:2.60.120.260 367 460 1.3E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 Pfam PF12704 MacB-like periplasmic core domain 447 646 1.0E-6 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 Pfam PF12704 MacB-like periplasmic core domain 27 242 3.4E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 PANTHER PTHR30572 416 811 2.1E-62 T 23-04-2016 NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 PANTHER PTHR30572 301 374 2.1E-62 T 23-04-2016 NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 PANTHER PTHR30572:SF4 416 811 2.1E-62 T 23-04-2016 NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 PANTHER PTHR30572:SF4 301 374 2.1E-62 T 23-04-2016 NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 Pfam PF02687 FtsX-like permease family 304 410 1.2E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS05930 8407921a386b63ad445be895aefa31c2 811 Pfam PF02687 FtsX-like permease family 693 800 9.1E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF02151 UvrB/uvrC motif 439 473 3.2E-5 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SUPERFAMILY SSF52540 508 819 6.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.4E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 2.4E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 2.4E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 670 684 2.4E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 738 816 4.9E-23 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF07724 AAA domain (Cdc48 subfamily) 558 731 7.6E-53 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:3.40.50.300 719 748 5.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:3.40.50.300 513 683 5.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:1.10.8.60 366 450 9.9E-33 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SMART SM01086 738 829 2.1E-33 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:1.10.8.60 749 836 1.9E-30 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 227 317 4.2E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:1.10.1780.10 1 148 2.7E-32 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 593 611 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SUPERFAMILY SSF52540 183 488 7.91E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Gene3D G3DSA:3.40.50.300 185 365 7.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PANTHER PTHR11638 165 841 0.0 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PANTHER PTHR11638 1 142 0.0 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 141 1.3E-8 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 66 2.2E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PANTHER PTHR11638:SF18 165 841 0.0 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 PANTHER PTHR11638:SF18 1 142 0.0 T 23-04-2016 NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SMART SM00382 559 731 2.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SMART SM00382 222 366 9.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS23210 a201dc3945d162040fec10234fa32045 841 SUPERFAMILY SSF81923 3 141 3.79E-22 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS20305 844888a68b107ba3416dcb40964fe85d 649 PANTHER PTHR30540 24 440 5.5E-140 T 23-04-2016 NIAKO_RS20305 844888a68b107ba3416dcb40964fe85d 649 Pfam PF02705 K+ potassium transporter 20 542 3.4E-170 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 NIAKO_RS20305 844888a68b107ba3416dcb40964fe85d 649 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 11 638 26.01 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup NIAKO_RS21385 5674807a707681aa2485f5c1222eb834 198 Gene3D G3DSA:3.40.30.10 61 178 6.3E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS21385 5674807a707681aa2485f5c1222eb834 198 SUPERFAMILY SSF52833 75 178 4.16E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 SUPERFAMILY SSF52540 5 268 5.31E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 SMART SM00382 58 229 5.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 166 195 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 128 157 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 94 123 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 244 273 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 298 315 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PRINTS PR00142 RecA protein signature 211 239 8.3E-83 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PANTHER PTHR22942:SF1 1 334 9.8E-195 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 Gene3D G3DSA:3.40.50.300 29 268 2.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 PANTHER PTHR22942 1 334 9.8E-195 T 23-04-2016 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 Pfam PF00154 recA bacterial DNA recombination protein 8 269 1.5E-139 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 SUPERFAMILY SSF54752 269 326 7.59E-22 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 ProSitePatterns PS00321 recA signature. 214 222 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 Hamap MF_00268 Protein RecA [recA]. 6 330 51.758 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 Gene3D G3DSA:3.30.250.10 269 327 1.1E-28 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal NIAKO_RS30930 a4bcb7753d099950b1a66bae9445b1e9 334 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 325 4.6E-173 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 SUPERFAMILY SSF103473 2 398 4.58E-38 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 1 395 6.0E-111 T 23-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 Pfam PF07690 Major Facilitator Superfamily 6 359 2.3E-22 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 Gene3D G3DSA:1.20.1250.20 3 210 5.2E-20 T 23-04-2016 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 PANTHER PTHR23514:SF7 176 399 5.1E-124 T 23-04-2016 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 PANTHER PTHR23514 176 399 5.1E-124 T 23-04-2016 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 PANTHER PTHR23514 1 158 5.1E-124 T 23-04-2016 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 Gene3D G3DSA:1.20.1250.20 218 396 4.8E-6 T 23-04-2016 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 80 393 1.6E-76 T 23-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 NIAKO_RS32965 12bed7edd975dd5252e543c4c5dd393e 405 PANTHER PTHR23514:SF7 1 158 5.1E-124 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PANTHER PTHR24423 3 17 3.3E-106 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PANTHER PTHR24423 140 494 3.3E-106 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Gene3D G3DSA:3.30.450.20 142 279 2.2E-13 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SUPERFAMILY SSF55785 147 251 6.46E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Gene3D G3DSA:3.40.50.2300 4 138 1.6E-34 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 341 1.9E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Pfam PF00072 Response regulator receiver domain 9 118 6.3E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SMART SM00448 7 121 1.7E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SMART SM00387 383 495 1.0E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Pfam PF00989 PAS fold 143 230 1.3E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 7.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 7.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 7.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 493 5.5E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SUPERFAMILY SSF47384 260 342 3.53E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Gene3D G3DSA:3.30.565.10 342 494 3.5E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 251 5.9E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SUPERFAMILY SSF52172 8 144 4.55E-34 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SUPERFAMILY SSF55874 332 495 2.88E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PANTHER PTHR24423:SF383 3 17 3.3E-106 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 PANTHER PTHR24423:SF383 140 494 3.3E-106 T 23-04-2016 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SMART SM00091 142 208 3.6E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 Gene3D G3DSA:1.10.287.130 280 339 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS13440 842a88c503cbe103f8bfa6f79bf50a93 498 SMART SM00388 275 343 6.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 Pfam PF01522 Polysaccharide deacetylase 79 249 6.9E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 Gene3D G3DSA:3.20.20.370 51 121 1.2E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 Gene3D G3DSA:3.20.20.370 172 251 1.2E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 PANTHER PTHR34216 167 297 1.8E-35 T 23-04-2016 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 PANTHER PTHR34216 47 135 1.8E-35 T 23-04-2016 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 SUPERFAMILY SSF88713 172 255 2.03E-35 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS34950 5c0ec29cbd6e836e9ad04b45146e4782 327 SUPERFAMILY SSF88713 46 121 2.03E-35 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 Pfam PF02469 Fasciclin domain 207 355 2.8E-6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 Pfam PF02469 Fasciclin domain 66 193 6.3E-22 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 PANTHER PTHR10900:SF77 45 350 1.6E-30 T 23-04-2016 NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 SUPERFAMILY SSF82153 51 194 6.41E-27 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 Gene3D G3DSA:2.30.180.10 196 354 4.6E-13 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 PANTHER PTHR10900 45 350 1.6E-30 T 23-04-2016 NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 Pfam PF17133 Domain of unknown function (DUF5108) 416 556 1.2E-6 T 23-04-2016 IPR033401 Domain of unknown function DUF5108 NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 SUPERFAMILY SSF82153 196 356 1.57E-10 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 Gene3D G3DSA:2.30.180.10 54 193 1.3E-27 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 SMART SM00554 239 359 1.6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03575 c6c0c664a6851f027f5110f4d148377d 576 SMART SM00554 89 194 1.3E-18 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS09995 9d0845ce351928c5aa36e00859c50850 241 Pfam PF02754 Cysteine-rich domain 134 218 1.6E-16 T 23-04-2016 IPR004017 Cysteine-rich domain NIAKO_RS09995 9d0845ce351928c5aa36e00859c50850 241 Pfam PF02754 Cysteine-rich domain 3 83 2.4E-12 T 23-04-2016 IPR004017 Cysteine-rich domain NIAKO_RS09995 9d0845ce351928c5aa36e00859c50850 241 PANTHER PTHR30296:SF0 2 239 2.8E-92 T 23-04-2016 NIAKO_RS09995 9d0845ce351928c5aa36e00859c50850 241 PANTHER PTHR30296 2 239 2.8E-92 T 23-04-2016 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 PANTHER PTHR30146 3 338 1.6E-96 T 23-04-2016 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 SMART SM00354 3 76 5.8E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 Pfam PF13377 Periplasmic binding protein-like domain 174 338 6.6E-28 T 23-04-2016 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 Gene3D G3DSA:3.40.50.2300 178 316 1.5E-36 T 23-04-2016 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 53 9.6E-13 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 Gene3D G3DSA:3.40.50.2300 59 177 1.1E-44 T 23-04-2016 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 SUPERFAMILY SSF53822 65 338 4.71E-61 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 SUPERFAMILY SSF47413 4 61 1.65E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS00950 59c2086adce1010c60ff412248bdb24b 338 Gene3D G3DSA:1.10.260.40 4 58 1.2E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS14830 5ddc513e2d8ff76b628461c410f68273 256 SUPERFAMILY SSF53335 6 169 1.19E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14830 5ddc513e2d8ff76b628461c410f68273 256 Gene3D G3DSA:3.40.50.150 25 170 8.1E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14830 5ddc513e2d8ff76b628461c410f68273 256 Pfam PF13489 Methyltransferase domain 25 119 3.6E-9 T 23-04-2016 NIAKO_RS31140 48a4ecffe2bb30a2b308d8a28db556d7 172 PANTHER PTHR23091:SF237 1 157 7.5E-29 T 23-04-2016 NIAKO_RS31140 48a4ecffe2bb30a2b308d8a28db556d7 172 Gene3D G3DSA:3.40.630.30 1 133 2.1E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS31140 48a4ecffe2bb30a2b308d8a28db556d7 172 SUPERFAMILY SSF55729 2 133 9.35E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS31140 48a4ecffe2bb30a2b308d8a28db556d7 172 Pfam PF13527 Acetyltransferase (GNAT) domain 5 127 1.3E-9 T 23-04-2016 NIAKO_RS31140 48a4ecffe2bb30a2b308d8a28db556d7 172 PANTHER PTHR23091 1 157 7.5E-29 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 Pfam PF07971 Glycosyl hydrolase family 92 268 755 1.2E-174 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 Gene3D G3DSA:2.70.98.10 21 351 1.5E-104 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 759 1.9E-200 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143 1 243 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143 260 399 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143 415 761 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 SUPERFAMILY SSF48208 289 741 2.89E-32 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 Gene3D G3DSA:3.30.2080.10 623 760 5.9E-63 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 Gene3D G3DSA:1.20.1050.60 375 467 5.2E-31 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143:SF22 1 243 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143:SF22 260 399 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 PANTHER PTHR12143:SF22 415 761 3.8E-214 T 23-04-2016 NIAKO_RS27465 8d9941534489c8afd305912fd562a153 761 Gene3D G3DSA:1.20.1610.10 468 622 5.5E-62 T 23-04-2016 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 Pfam PF13365 Trypsin-like peptidase domain 61 197 3.1E-32 T 23-04-2016 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PANTHER PTHR22939 15 328 1.4E-93 T 23-04-2016 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 SUPERFAMILY SSF50156 258 328 8.94E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 SUPERFAMILY SSF50494 25 229 1.82E-55 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 SMART SM00228 235 317 2.3E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 275 287 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 168 185 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 131 155 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 70 82 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PRINTS PR00834 HtrA/DegQ protease family signature 91 111 1.6E-46 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 Gene3D G3DSA:2.30.42.10 235 328 1.4E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 Gene3D G3DSA:2.40.10.10 20 125 9.1E-33 T 23-04-2016 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 Gene3D G3DSA:2.40.10.10 126 234 9.1E-38 T 23-04-2016 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 Pfam PF13180 PDZ domain 255 324 1.2E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29905 33cec773bda4072eec626f710037aab9 330 PANTHER PTHR22939:SF77 15 328 1.4E-93 T 23-04-2016 NIAKO_RS10420 001f59626d782cbd377d5e33a5e3d82f 288 Pfam PF00805 Pentapeptide repeats (8 copies) 8 46 4.3E-11 T 23-04-2016 IPR001646 Pentapeptide repeat NIAKO_RS10420 001f59626d782cbd377d5e33a5e3d82f 288 SUPERFAMILY SSF141571 3 48 3.24E-17 T 23-04-2016 NIAKO_RS10420 001f59626d782cbd377d5e33a5e3d82f 288 SUPERFAMILY SSF141571 239 283 3.24E-17 T 23-04-2016 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 381 2.0E-12 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Gene3D G3DSA:3.40.1190.10 81 299 6.6E-58 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 PANTHER PTHR23135:SF3 1 427 2.9E-117 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 18 427 5.5E-105 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 PANTHER PTHR23135 1 427 2.9E-117 T 23-04-2016 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 SUPERFAMILY SSF53623 90 299 7.46E-43 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Pfam PF01225 Mur ligase family, catalytic domain 15 86 7.1E-9 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Gene3D G3DSA:3.90.190.20 301 427 1.9E-28 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 428 27.616 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 SUPERFAMILY SSF63418 11 87 4.97E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Pfam PF08245 Mur ligase middle domain 96 280 4.6E-39 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 SUPERFAMILY SSF53244 302 426 5.49E-26 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS34420 3af5caa8deb7f3875dde559c06148ee8 428 Gene3D G3DSA:3.40.1390.10 14 80 2.1E-15 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 623 1.1E-203 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 Pfam PF00361 Proton-conducting membrane transporter 136 430 5.7E-86 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PANTHER PTHR22773 1 583 3.6E-204 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.9E-57 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 2.5E-18 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PANTHER PTHR22773:SF50 1 583 3.6E-204 T 23-04-2016 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 1.3E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 1.3E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 1.3E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 1.3E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14545 c8f02c90afca3d97637fcbbfef55b4fd 627 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 433 623 4.4E-8 T 23-04-2016 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 PANTHER PTHR11908 1 141 1.9E-34 T 23-04-2016 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 PANTHER PTHR11908:SF66 1 141 1.9E-34 T 23-04-2016 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 SUPERFAMILY SSF54292 4 80 1.84E-23 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 Gene3D G3DSA:3.10.20.30 3 76 1.8E-26 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 Gene3D G3DSA:1.10.150.120 77 160 1.5E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 Pfam PF01799 [2Fe-2S] binding domain 75 148 1.5E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS25355 0a3c64d83851855f877fdc27702b1c36 168 SUPERFAMILY SSF47741 87 158 4.97E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS27620 90c27e1cbdfbcc8b20a432c51147384f 295 PANTHER PTHR32322 1 291 1.4E-34 T 23-04-2016 NIAKO_RS27620 90c27e1cbdfbcc8b20a432c51147384f 295 SUPERFAMILY SSF103481 45 145 1.09E-14 T 23-04-2016 NIAKO_RS27620 90c27e1cbdfbcc8b20a432c51147384f 295 SUPERFAMILY SSF103481 190 291 4.71E-9 T 23-04-2016 NIAKO_RS27620 90c27e1cbdfbcc8b20a432c51147384f 295 Pfam PF00892 EamA-like transporter family 11 142 6.9E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS27620 90c27e1cbdfbcc8b20a432c51147384f 295 Pfam PF00892 EamA-like transporter family 159 289 1.4E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.0E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.0E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.0E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.0E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.0E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 Pfam PF00106 short chain dehydrogenase 2 193 1.4E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PANTHER PTHR24319:SF32 2 237 3.1E-63 T 23-04-2016 NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 Gene3D G3DSA:3.40.50.720 2 234 2.4E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 PANTHER PTHR24319 2 237 3.1E-63 T 23-04-2016 NIAKO_RS25005 c0db60decad6ce6648ccf4ef23a96f86 250 SUPERFAMILY SSF51735 1 227 2.67E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08325 33ea58aa4fe566307d46226bf64bbdab 732 SUPERFAMILY SSF102114 326 522 5.89E-22 T 23-04-2016 NIAKO_RS08325 33ea58aa4fe566307d46226bf64bbdab 732 Gene3D G3DSA:3.80.30.20 354 543 4.0E-20 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS08325 33ea58aa4fe566307d46226bf64bbdab 732 SMART SM00729 349 554 1.1E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS08325 33ea58aa4fe566307d46226bf64bbdab 732 PANTHER PTHR11918:SF64 187 517 2.0E-21 T 23-04-2016 NIAKO_RS08325 33ea58aa4fe566307d46226bf64bbdab 732 PANTHER PTHR11918 187 517 2.0E-21 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 SUPERFAMILY SSF46689 85 136 1.03E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 SMART SM00342 50 136 1.8E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 PANTHER PTHR11019 52 144 3.4E-15 T 23-04-2016 NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 Gene3D G3DSA:1.10.10.60 86 138 1.8E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 Pfam PF12833 Helix-turn-helix domain 56 137 5.1E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10460 5af954830d63292902c953892ad12bda 145 PANTHER PTHR11019:SF11 52 144 3.4E-15 T 23-04-2016 NIAKO_RS20910 f41e5c4b97372706fb4d546e7e250754 479 Gene3D G3DSA:1.25.40.10 173 217 2.9E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20910 f41e5c4b97372706fb4d546e7e250754 479 Gene3D G3DSA:1.25.40.10 260 336 2.9E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20910 f41e5c4b97372706fb4d546e7e250754 479 SUPERFAMILY SSF48452 173 217 8.41E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20910 f41e5c4b97372706fb4d546e7e250754 479 SUPERFAMILY SSF48452 260 349 8.41E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02945 e60bae1927daced98500b27a9a74b9bd 142 SUPERFAMILY SSF55331 2 124 3.32E-14 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily NIAKO_RS02945 e60bae1927daced98500b27a9a74b9bd 142 Pfam PF01361 Tautomerase enzyme 2 59 6.5E-7 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NIAKO_RS02945 e60bae1927daced98500b27a9a74b9bd 142 Gene3D G3DSA:3.30.429.20 1 60 6.4E-8 T 23-04-2016 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 SUPERFAMILY SSF56770 28 175 9.94E-62 T 23-04-2016 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 56 164 4.0E-24 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 20 170 40.963 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 171 7.2E-63 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 PANTHER PTHR11995 28 177 1.5E-78 T 23-04-2016 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 PANTHER PTHR11995:SF14 28 177 1.5E-78 T 23-04-2016 NIAKO_RS34765 5e8850e41fe9ae9bedc559e31370540f 192 Gene3D G3DSA:3.40.50.700 43 168 4.9E-33 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS01475 c1f302756c3dc41fc98a930b6115d9b8 406 Pfam PF07690 Major Facilitator Superfamily 11 181 8.3E-18 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS01475 c1f302756c3dc41fc98a930b6115d9b8 406 SUPERFAMILY SSF103473 9 402 2.35E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS01475 c1f302756c3dc41fc98a930b6115d9b8 406 Gene3D G3DSA:1.20.1250.20 13 188 1.9E-20 T 23-04-2016 NIAKO_RS01475 c1f302756c3dc41fc98a930b6115d9b8 406 Gene3D G3DSA:1.20.1250.20 254 395 3.4E-9 T 23-04-2016 NIAKO_RS01475 c1f302756c3dc41fc98a930b6115d9b8 406 PANTHER PTHR23508 11 405 2.6E-30 T 23-04-2016 NIAKO_RS30470 54d9d47769e649b159eff4f879a64772 257 Gene3D G3DSA:3.40.1090.10 8 160 2.9E-19 T 23-04-2016 NIAKO_RS30470 54d9d47769e649b159eff4f879a64772 257 PANTHER PTHR14226:SF37 3 256 4.0E-57 T 23-04-2016 NIAKO_RS30470 54d9d47769e649b159eff4f879a64772 257 Pfam PF01734 Patatin-like phospholipase 6 162 5.6E-33 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS30470 54d9d47769e649b159eff4f879a64772 257 PANTHER PTHR14226 3 256 4.0E-57 T 23-04-2016 NIAKO_RS30470 54d9d47769e649b159eff4f879a64772 257 SUPERFAMILY SSF52151 3 251 1.78E-56 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS18250 60a5423fcf26a64af051e40beb98d04c 448 Gene3D G3DSA:2.130.10.10 329 423 1.5E-25 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS18250 60a5423fcf26a64af051e40beb98d04c 448 Gene3D G3DSA:2.130.10.10 25 294 1.5E-25 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS18250 60a5423fcf26a64af051e40beb98d04c 448 SUPERFAMILY SSF50969 206 266 1.02E-7 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS18250 60a5423fcf26a64af051e40beb98d04c 448 SUPERFAMILY SSF50969 334 416 1.02E-7 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS18250 60a5423fcf26a64af051e40beb98d04c 448 SUPERFAMILY SSF50969 35 112 1.02E-7 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS06840 8b14e6287b5b59e4485894529c7d4aa6 206 Gene3D G3DSA:3.20.80.10 1 205 6.1E-66 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS06840 8b14e6287b5b59e4485894529c7d4aa6 206 SUPERFAMILY SSF55136 131 198 9.16E-6 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS06840 8b14e6287b5b59e4485894529c7d4aa6 206 Pfam PF06445 GyrI-like small molecule binding domain 19 202 1.1E-19 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain NIAKO_RS06840 8b14e6287b5b59e4485894529c7d4aa6 206 PIRSF PIRSF031644 1 206 2.5E-56 T 23-04-2016 IPR008319 Uncharacterised conserved protein UCP031644 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 PANTHER PTHR30173 1 184 2.0E-39 T 23-04-2016 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 181 5.7E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 25 182 1.4E-39 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 Pfam PF08281 Sigma-70, region 4 128 178 2.5E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 Gene3D G3DSA:1.10.10.10 124 184 7.9E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 SUPERFAMILY SSF88659 129 180 4.8E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 PANTHER PTHR30173:SF20 1 184 2.0E-39 T 23-04-2016 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 SUPERFAMILY SSF88946 4 101 1.22E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 Pfam PF04542 Sigma-70 region 2 29 95 9.5E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08810 ae9da6ea30a0531e8a3033f9b9f3e468 188 Gene3D G3DSA:1.10.1740.10 5 113 4.5E-20 T 23-04-2016 NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 Gene3D G3DSA:3.40.50.1820 56 359 1.9E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 PANTHER PTHR17630 96 359 4.0E-64 T 23-04-2016 NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 Pfam PF05448 Acetyl xylan esterase (AXE1) 77 223 1.8E-9 T 23-04-2016 IPR008391 Acetyl xylan esterase NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 PANTHER PTHR17630:SF54 96 359 4.0E-64 T 23-04-2016 NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 SUPERFAMILY SSF53474 282 359 1.33E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS06745 808e1a2aea3b7f24f413dbf97836ef36 359 SUPERFAMILY SSF53474 44 233 1.33E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03335 6c738e8fbbaf72ce8744272d072440c4 304 PANTHER PTHR10907 33 302 2.6E-55 T 23-04-2016 NIAKO_RS03335 6c738e8fbbaf72ce8744272d072440c4 304 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 49 290 1.2E-40 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region NIAKO_RS03335 6c738e8fbbaf72ce8744272d072440c4 304 Gene3D G3DSA:2.120.10.30 32 303 2.3E-60 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS03335 6c738e8fbbaf72ce8744272d072440c4 304 PANTHER PTHR10907:SF47 33 302 2.6E-55 T 23-04-2016 NIAKO_RS03335 6c738e8fbbaf72ce8744272d072440c4 304 SUPERFAMILY SSF63829 33 303 6.7E-58 T 23-04-2016 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 151 167 1.7E-8 T 23-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 299 313 1.7E-8 T 23-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 446 467 1.7E-8 T 23-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 283 299 1.7E-8 T 23-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 133 161 1.2E-6 T 23-04-2016 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 SUPERFAMILY SSF50985 276 479 4.32E-33 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 PANTHER PTHR22870 133 386 3.0E-46 T 23-04-2016 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 296 344 6.8E-9 T 23-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 Gene3D G3DSA:2.130.10.30 182 475 1.0E-50 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NIAKO_RS18320 c84cf7c8f541ce3ad90020a298d57cb3 480 SUPERFAMILY SSF50985 125 325 8.24E-40 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SUPERFAMILY SSF52113 624 698 1.21E-15 T 23-04-2016 IPR001357 BRCT domain NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:3.40.50.10190 625 697 3.3E-20 T 23-04-2016 IPR001357 BRCT domain NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 352 428 5.1E-28 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:2.40.50.140 349 419 1.9E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SUPERFAMILY SSF47781 433 612 1.63E-52 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 PANTHER PTHR23389 5 559 1.2E-164 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:3.30.470.30 142 281 4.2E-39 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:1.10.150.20 464 532 2.7E-20 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Pfam PF12826 Helix-hairpin-helix motif 539 601 5.2E-20 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SUPERFAMILY SSF50249 348 430 4.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 PANTHER PTHR23389:SF9 5 559 1.2E-164 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SMART SM00292 622 699 8.7E-8 T 23-04-2016 IPR001357 BRCT domain NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 625 697 8.0E-10 T 23-04-2016 IPR001357 BRCT domain NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 437 463 2.1E-10 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 29 348 1.8E-114 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Hamap MF_01588 DNA ligase [ligA]. 29 697 45.997 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SUPERFAMILY SSF56091 29 345 1.66E-101 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 34 693 1.9E-231 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:1.10.287.610 28 89 9.8E-22 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 SMART SM00532 26 477 8.8E-218 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 Gene3D G3DSA:1.10.150.20 533 613 3.4E-23 T 23-04-2016 NIAKO_RS29765 88f90d76a96f7e55d4a7262fce7ccf50 699 PIRSF PIRSF001604 18 699 2.5E-229 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NIAKO_RS15960 ef55a99ad8cc04320b04660ceb92e5a0 191 Gene3D G3DSA:2.60.120.10 1 154 1.4E-33 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS15960 ef55a99ad8cc04320b04660ceb92e5a0 191 SUPERFAMILY SSF51206 5 138 6.97E-21 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS15960 ef55a99ad8cc04320b04660ceb92e5a0 191 PANTHER PTHR24567 11 191 2.9E-27 T 23-04-2016 NIAKO_RS15960 ef55a99ad8cc04320b04660ceb92e5a0 191 Pfam PF00027 Cyclic nucleotide-binding domain 29 112 1.8E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS15960 ef55a99ad8cc04320b04660ceb92e5a0 191 PANTHER PTHR24567:SF33 11 191 2.9E-27 T 23-04-2016 NIAKO_RS28140 1444b709ab968bc53892bb1cf015dbfb 122 SUPERFAMILY SSF109635 4 88 1.83E-6 T 23-04-2016 NIAKO_RS28140 1444b709ab968bc53892bb1cf015dbfb 122 PANTHER PTHR33823 1 120 1.7E-20 T 23-04-2016 NIAKO_RS28140 1444b709ab968bc53892bb1cf015dbfb 122 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 87 117 3.6E-7 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 NIAKO_RS28140 1444b709ab968bc53892bb1cf015dbfb 122 SUPERFAMILY SSF57716 89 120 9.41E-5 T 23-04-2016 NIAKO_RS25215 8ac34499bf24f77b1062c80c31fc99fb 334 PIRSF PIRSF006268 1 330 3.6E-79 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS25215 8ac34499bf24f77b1062c80c31fc99fb 334 SUPERFAMILY SSF143631 23 315 6.1E-83 T 23-04-2016 IPR003374 ApbE-like domain NIAKO_RS25215 8ac34499bf24f77b1062c80c31fc99fb 334 PANTHER PTHR30040:SF3 1 334 2.5E-100 T 23-04-2016 NIAKO_RS25215 8ac34499bf24f77b1062c80c31fc99fb 334 PANTHER PTHR30040 1 334 2.5E-100 T 23-04-2016 NIAKO_RS25215 8ac34499bf24f77b1062c80c31fc99fb 334 Pfam PF02424 ApbE family 31 307 1.0E-78 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 SUPERFAMILY SSF88946 5 108 9.42E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 Pfam PF04542 Sigma-70 region 2 27 93 9.7E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 Pfam PF08281 Sigma-70, region 4 126 175 7.9E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 180 3.3E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 PANTHER PTHR30173 1 200 2.3E-46 T 23-04-2016 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 PANTHER PTHR30173:SF20 1 200 2.3E-46 T 23-04-2016 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 Gene3D G3DSA:1.10.1740.10 5 108 8.5E-27 T 23-04-2016 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 SUPERFAMILY SSF88659 110 183 3.55E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 179 1.4E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13630 9bb1b5705f7e6fb212c2c0c6c7ee9d4e 201 Gene3D G3DSA:1.10.10.10 124 182 9.6E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07835 c634a7a17635dc800ec7c28f82ed9b81 441 Pfam PF02321 Outer membrane efflux protein 32 231 4.6E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS07835 c634a7a17635dc800ec7c28f82ed9b81 441 Pfam PF02321 Outer membrane efflux protein 255 434 5.1E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS07835 c634a7a17635dc800ec7c28f82ed9b81 441 SUPERFAMILY SSF56954 5 439 7.72E-73 T 23-04-2016 NIAKO_RS07835 c634a7a17635dc800ec7c28f82ed9b81 441 PANTHER PTHR30026 9 439 7.6E-43 T 23-04-2016 NIAKO_RS07835 c634a7a17635dc800ec7c28f82ed9b81 441 Gene3D G3DSA:1.20.1600.10 24 437 5.2E-56 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82693 135 181 3.4E-17 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PANTHER PTHR32063 1 1019 8.4E-248 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82693 267 323 3.4E-17 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Gene3D G3DSA:1.10.3850.10 275 491 2.9E-51 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Gene3D G3DSA:1.10.3850.10 812 1023 3.7E-47 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82693 42 133 6.8E-20 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82866 807 1025 7.72E-41 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82714 714 803 4.71E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Gene3D G3DSA:3.30.70.1430 42 138 2.2E-18 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82714 184 264 9.94E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Gene3D G3DSA:3.30.2090.10 714 803 1.5E-8 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Gene3D G3DSA:3.30.2090.10 183 265 1.9E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 Pfam PF00873 AcrB/AcrD/AcrF family 7 1020 4.0E-196 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 SUPERFAMILY SSF82866 290 489 4.45E-39 T 23-04-2016 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.3E-32 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS19990 55665bc4f6a751360f382dd61f59ddfe 1046 PANTHER PTHR32063:SF0 1 1019 8.4E-248 T 23-04-2016 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Gene3D G3DSA:2.120.10.60 239 349 7.5E-9 T 23-04-2016 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SUPERFAMILY SSF48452 23 167 6.2E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Gene3D G3DSA:2.60.40.1120 454 517 1.6E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SMART SM00028 117 150 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SMART SM00028 82 115 0.16 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SMART SM00028 23 56 200.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Gene3D G3DSA:3.30.1330.60 544 660 7.4E-35 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Pfam PF00691 OmpA family 553 643 3.1E-18 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Pfam PF13620 Carboxypeptidase regulatory-like domain 454 521 3.7E-9 T 23-04-2016 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 PANTHER PTHR30128 550 660 1.5E-27 T 23-04-2016 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SUPERFAMILY SSF82171 250 383 3.53E-10 T 23-04-2016 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SUPERFAMILY SSF49464 454 523 1.24E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Gene3D G3DSA:1.25.40.10 23 182 4.6E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Pfam PF07676 WD40-like Beta Propeller Repeat 255 266 0.13 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 Pfam PF07676 WD40-like Beta Propeller Repeat 309 335 1.8E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 SUPERFAMILY SSF103088 542 659 5.1E-30 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 PRINTS PR01021 OMPA domain signature 583 598 6.4E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 PRINTS PR01021 OMPA domain signature 553 575 6.4E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07365 a053326cdbcff1a65ae45ab1b1c1c11f 661 PRINTS PR01021 OMPA domain signature 598 614 6.4E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS22690 15d6e80c43b5b87a8579ae035fc74305 90 Pfam PF14026 Protein of unknown function (DUF4242) 4 80 1.0E-26 T 23-04-2016 IPR025336 Protein of unknown function DUF4242 NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 250 31.048 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 252 2.5E-84 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 PANTHER PTHR41251:SF1 1 249 4.2E-63 T 23-04-2016 NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 186 3.0E-38 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 Gene3D G3DSA:2.40.290.10 11 171 8.2E-15 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 SUPERFAMILY SSF100939 1 255 9.22E-52 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 PIRSF PIRSF006493 1 263 2.2E-87 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 SMART SM00559 52 179 4.6E-28 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NIAKO_RS07745 e3444293ae8e3b79255dd7cb6c51bf4e 263 PANTHER PTHR41251 1 249 4.2E-63 T 23-04-2016 NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 SUPERFAMILY SSF51445 31 355 4.48E-91 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 PANTHER PTHR10030 31 487 3.3E-198 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 PANTHER PTHR10030:SF28 31 487 3.3E-198 T 23-04-2016 NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 SMART SM00812 35 405 2.1E-13 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 Gene3D G3DSA:3.20.20.80 31 356 2.2E-96 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 Gene3D G3DSA:2.60.120.260 360 476 6.7E-20 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 Pfam PF00754 F5/8 type C domain 368 474 3.7E-13 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 SUPERFAMILY SSF49785 358 487 2.06E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35790 3cc6bc0a4b5a0c0aa283d4b92126501c 487 Pfam PF01120 Alpha-L-fucosidase 46 349 1.8E-38 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 SUPERFAMILY SSF50800 1 212 2.83E-59 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 SUPERFAMILY SSF63380 233 337 4.48E-29 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Gene3D G3DSA:3.10.20.30 473 579 5.3E-14 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Pfam PF00970 Oxidoreductase FAD-binding domain 241 337 1.4E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Gene3D G3DSA:3.40.50.80 342 472 1.0E-26 T 23-04-2016 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 SUPERFAMILY SSF52343 342 477 1.96E-31 T 23-04-2016 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 516 572 2.6E-4 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Gene3D G3DSA:2.40.30.10 233 336 4.2E-32 T 23-04-2016 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00409 Phthalate dioxygenase reductase family signature 325 339 1.0E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00409 Phthalate dioxygenase reductase family signature 347 366 1.0E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00409 Phthalate dioxygenase reductase family signature 262 272 1.0E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00409 Phthalate dioxygenase reductase family signature 272 284 1.0E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 SUPERFAMILY SSF54292 486 580 2.08E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Pfam PF03473 MOSC domain 51 160 2.5E-17 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Pfam PF00175 Oxidoreductase NAD-binding domain 348 455 2.0E-11 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Pfam PF03475 3-alpha domain 172 212 3.1E-11 T 23-04-2016 IPR005163 3-alpha domain NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 Gene3D G3DSA:2.40.33.20 1 214 3.4E-66 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PANTHER PTHR22924 234 540 1.0E-62 T 23-04-2016 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 347 366 8.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 442 450 8.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS20600 1097ba1e0f41c55edc0a1f20bf120d51 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 268 278 8.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 381 5.0E-70 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 Gene3D G3DSA:3.40.50.1100 149 389 1.1E-55 T 23-04-2016 NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 TIGRFAM TIGR00260 thrC: threonine synthase 60 384 1.5E-52 T 23-04-2016 IPR004450 Threonine synthase-like NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 104 118 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 PANTHER PTHR10314:SF5 20 386 4.7E-84 T 23-04-2016 NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 SUPERFAMILY SSF53686 6 388 6.42E-85 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS21450 f69dd994fb15f6fdbaf709e00ce39166 391 PANTHER PTHR10314 20 386 4.7E-84 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532 692 910 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532 635 661 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.60.40.1120 132 215 4.0E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Pfam PF13715 CarboxypepD_reg-like domain 132 210 5.4E-14 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532:SF57 928 1127 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532:SF57 635 661 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF49464 132 189 2.88E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 321 350 2.7E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.170.130.10 216 343 1.2E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 131 1129 3.4E-185 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532:SF57 132 533 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.40.170.20 344 364 1.6E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.40.170.20 552 930 1.6E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.40.170.20 980 1005 1.6E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.40.170.20 1043 1129 1.6E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Gene3D G3DSA:2.40.170.20 435 513 1.6E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF56935 1052 1129 4.17E-68 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF56935 557 900 4.17E-68 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF56935 971 1015 4.17E-68 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF56935 209 368 4.17E-68 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 SUPERFAMILY SSF56935 426 514 4.17E-68 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 Pfam PF07715 TonB-dependent Receptor Plug Domain 220 344 5.4E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532 132 533 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532 928 1127 8.4E-148 T 23-04-2016 NIAKO_RS20140 491bfa9d331f9a9daf2330355037f240 1129 PANTHER PTHR11532:SF57 692 910 8.4E-148 T 23-04-2016 NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 Pfam PF00578 AhpC/TSA family 118 238 3.6E-20 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 PANTHER PTHR10681:SF68 105 264 2.3E-21 T 23-04-2016 NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 ProSitePatterns PS00194 Thioredoxin family active site. 144 162 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 PANTHER PTHR10681 105 264 2.3E-21 T 23-04-2016 NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 SUPERFAMILY SSF52833 116 261 1.02E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 Gene3D G3DSA:3.40.30.10 3 28 6.6E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36330 bca237dc46d084864463bf8c9569d101 267 Gene3D G3DSA:3.40.30.10 113 260 6.6E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 SUPERFAMILY SSF56935 613 703 1.92E-40 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 SUPERFAMILY SSF56935 8 431 1.92E-40 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 SUPERFAMILY SSF56935 526 569 1.92E-40 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532 135 190 3.5E-124 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 5 703 1.0E-147 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 Gene3D G3DSA:2.40.170.20 4 450 1.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 Gene3D G3DSA:2.40.170.20 534 703 1.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532 217 701 3.5E-124 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532:SF57 217 701 3.5E-124 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532:SF57 135 190 3.5E-124 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532 4 22 3.5E-124 T 23-04-2016 NIAKO_RS18530 563bd7a537a1965f98911b4a1ac3b8ad 703 PANTHER PTHR11532:SF57 4 22 3.5E-124 T 23-04-2016 NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 Gene3D G3DSA:3.40.50.2300 2 90 1.0E-14 T 23-04-2016 NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 PANTHER PTHR26402:SF606 4 94 1.2E-14 T 23-04-2016 NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 PANTHER PTHR26402 4 94 1.2E-14 T 23-04-2016 NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 SUPERFAMILY SSF52172 1 91 2.85E-17 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 Pfam PF00072 Response regulator receiver domain 6 90 7.7E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36315 f246bc653ef45ecb3b664e6b07280621 165 SMART SM00448 4 116 0.0045 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14355 ef6b006e81f11daa9b1c42125a3f4eec 365 SUPERFAMILY SSF53300 177 343 8.31E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS14355 ef6b006e81f11daa9b1c42125a3f4eec 365 Gene3D G3DSA:3.40.50.410 177 313 6.6E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PANTHER PTHR24322:SF554 10 146 3.4E-70 T 23-04-2016 NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PANTHER PTHR24322:SF554 164 195 3.4E-70 T 23-04-2016 NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 SUPERFAMILY SSF51735 1 242 1.44E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 Pfam PF00106 short chain dehydrogenase 7 201 3.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.1E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.1E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.1E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PANTHER PTHR24322 10 146 3.4E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 PANTHER PTHR24322 164 195 3.4E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32265 fe309738ba114bd4bebd1d06d86c093d 273 Gene3D G3DSA:3.40.50.720 2 242 6.6E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13385 92c43bc5dc07f939e219a399c26c5186 220 PANTHER PTHR14969 39 204 1.9E-26 T 23-04-2016 NIAKO_RS13385 92c43bc5dc07f939e219a399c26c5186 220 Pfam PF01569 PAP2 superfamily 85 204 1.5E-25 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13385 92c43bc5dc07f939e219a399c26c5186 220 SUPERFAMILY SSF48317 18 209 1.03E-36 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13385 92c43bc5dc07f939e219a399c26c5186 220 Gene3D G3DSA:1.20.144.10 41 204 1.1E-30 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13385 92c43bc5dc07f939e219a399c26c5186 220 SMART SM00014 83 200 1.1E-16 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1855 1937 8.8E-21 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SUPERFAMILY SSF51126 682 962 1.18E-14 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 Gene3D G3DSA:2.160.20.10 657 992 4.0E-26 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 Pfam PF13585 C-terminal domain of CHU protein family 1854 1934 1.8E-24 T 23-04-2016 NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 PANTHER PTHR11319 848 1024 2.4E-16 T 23-04-2016 NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SUPERFAMILY SSF51126 897 1204 1.26E-15 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 1034 1094 3500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 783 825 3600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 910 940 1800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 855 880 1700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 887 908 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS15655 96584cde7cdbf4bf34bc8ed2b450cfe7 1937 SMART SM00710 942 966 500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS05830 bf1a5e5daf1c5ff7449b1ff8aa9cc0dd 210 Gene3D G3DSA:1.20.1260.10 73 190 8.5E-12 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS05830 bf1a5e5daf1c5ff7449b1ff8aa9cc0dd 210 Pfam PF13628 Domain of unknown function (DUF4142) 71 205 3.4E-45 T 23-04-2016 IPR025419 Domain of unknown function DUF4142 NIAKO_RS05830 bf1a5e5daf1c5ff7449b1ff8aa9cc0dd 210 PANTHER PTHR38593 61 210 1.4E-18 T 23-04-2016 NIAKO_RS05830 bf1a5e5daf1c5ff7449b1ff8aa9cc0dd 210 PANTHER PTHR38593:SF1 61 210 1.4E-18 T 23-04-2016 NIAKO_RS24440 71ff085d8fe7514cecc1f36f69d744f9 467 SUPERFAMILY SSF48452 21 467 3.8E-107 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24440 71ff085d8fe7514cecc1f36f69d744f9 467 Pfam PF14322 Starch-binding associating with outer membrane 35 230 5.7E-29 T 23-04-2016 NIAKO_RS24440 71ff085d8fe7514cecc1f36f69d744f9 467 Pfam PF07980 SusD family 314 467 3.1E-30 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS24440 71ff085d8fe7514cecc1f36f69d744f9 467 Gene3D G3DSA:1.25.40.10 210 410 2.7E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 Gene3D G3DSA:1.10.10.10 160 214 1.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.6E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.6E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.6E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 PANTHER PTHR26402 8 215 2.8E-49 T 23-04-2016 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 SMART SM00448 8 123 1.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 SMART SM00421 152 209 5.6E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 PANTHER PTHR26402:SF588 8 215 2.8E-49 T 23-04-2016 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 Pfam PF00072 Response regulator receiver domain 10 123 1.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 Gene3D G3DSA:3.40.50.2300 6 159 4.2E-30 T 23-04-2016 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 4.9E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 SUPERFAMILY SSF46894 142 215 8.5E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS15065 0dca1b5841b324b230f12750f788c184 216 SUPERFAMILY SSF52172 7 136 3.56E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PANTHER PTHR11236:SF9 1 475 1.0E-140 T 23-04-2016 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 168 1.5E-20 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PANTHER PTHR11236 1 475 1.0E-140 T 23-04-2016 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 Pfam PF00425 chorismate binding enzyme 209 460 4.1E-81 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PRINTS PR00095 Anthranilate synthase component I signature 402 416 5.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PRINTS PR00095 Anthranilate synthase component I signature 324 337 5.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PRINTS PR00095 Anthranilate synthase component I signature 417 431 5.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 PRINTS PR00095 Anthranilate synthase component I signature 310 323 5.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 SUPERFAMILY SSF56322 5 468 6.02E-122 T 23-04-2016 IPR005801 ADC synthase GO:0009058 NIAKO_RS01760 14dcc4ab9b54c275e96c7c4e5afbed02 475 Gene3D G3DSA:3.60.120.10 4 473 3.1E-126 T 23-04-2016 IPR005801 ADC synthase GO:0009058 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 8.3E-8 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 PRINTS PR00139 Asparaginase/glutaminase family signature 74 92 8.3E-8 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 SUPERFAMILY SSF53774 3 156 5.5E-40 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 Gene3D G3DSA:3.40.50.1170 3 157 6.9E-38 T 23-04-2016 IPR027474 L-asparaginase, N-terminal NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 Pfam PF00710 Asparaginase, N-terminal 3 155 1.3E-30 T 23-04-2016 IPR027474 L-asparaginase, N-terminal NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 SMART SM00870 2 168 0.0036 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 PIRSF PIRSF500176 1 165 1.1E-28 T 23-04-2016 NIAKO_RS31410 19fdd49587b7ba6561be880b575596c0 168 PIRSF PIRSF001220 1 157 3.7E-25 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532:SF51 205 400 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532:SF51 524 1021 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532:SF51 17 189 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532:SF51 433 478 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532 205 400 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532 524 1021 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532 17 189 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 PANTHER PTHR11532 433 478 3.4E-181 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Pfam PF13715 CarboxypepD_reg-like domain 24 106 2.8E-17 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Pfam PF07715 TonB-dependent Receptor Plug Domain 116 238 4.7E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.40.170.20 454 796 3.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.40.170.20 853 927 3.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.40.170.20 330 406 3.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.40.170.20 239 276 3.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF56935 452 785 2.35E-73 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF56935 842 887 2.35E-73 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF56935 325 413 2.35E-73 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF56935 929 1023 2.35E-73 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF56935 103 262 2.35E-73 T 23-04-2016 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.170.130.10 108 238 1.4E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 Gene3D G3DSA:2.60.40.1120 24 107 1.2E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 22 1023 1.4E-171 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 2.4E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35815 a2cfb58a9857463461c3182160e49f74 1025 SUPERFAMILY SSF49464 22 104 2.22E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24360 97ea13b0baa4231f44056eaf415a4708 490 PANTHER PTHR41339 57 469 1.5E-35 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Gene3D G3DSA:2.60.40.1120 33 123 2.6E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Pfam PF13715 CarboxypepD_reg-like domain 34 115 4.5E-16 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF49464 32 113 4.71E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Gene3D G3DSA:2.170.130.10 125 238 1.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Gene3D G3DSA:2.40.170.20 322 812 3.8E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Gene3D G3DSA:2.40.170.20 872 919 3.8E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 32 1065 2.2E-274 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 4.7E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 229 1.2E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532:SF57 597 1063 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532:SF57 414 456 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532:SF57 1 375 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532:SF57 535 561 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532 597 1063 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532 414 456 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532 1 375 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 PANTHER PTHR11532 535 561 6.2E-268 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF56935 981 1065 8.24E-79 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF56935 321 409 8.24E-79 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF56935 879 924 8.24E-79 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF56935 447 812 8.24E-79 T 23-04-2016 NIAKO_RS25755 b7b8e3de2fc62ee08246424a008a5430 1065 SUPERFAMILY SSF56935 111 253 8.24E-79 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Pfam PF03129 Anticodon binding domain 380 453 5.1E-13 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 PANTHER PTHR11476 4 74 3.0E-159 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 PANTHER PTHR11476 100 453 3.0E-159 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Pfam PF13393 Histidyl-tRNA synthetase 10 69 1.8E-5 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Pfam PF13393 Histidyl-tRNA synthetase 101 347 4.7E-28 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 SUPERFAMILY SSF52954 364 453 1.46E-20 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Gene3D G3DSA:3.40.50.800 364 453 5.8E-25 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Gene3D G3DSA:3.30.930.10 266 359 1.4E-97 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Gene3D G3DSA:3.30.930.10 4 217 1.4E-97 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 PIRSF PIRSF001549 1 454 9.4E-127 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 8 445 1.2E-118 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 SUPERFAMILY SSF55681 6 358 9.16E-72 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 455 25.755 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 PANTHER PTHR11476:SF1 4 74 3.0E-159 T 23-04-2016 NIAKO_RS34735 2b5660c2dff22a46314a3b86a9b5f859 455 PANTHER PTHR11476:SF1 100 453 3.0E-159 T 23-04-2016 NIAKO_RS13740 f6c9c9350da6338c528ea3927bae931b 743 Pfam PF09113 Peptide-N-glycosidase F, C terminal 195 306 1.1E-21 T 23-04-2016 IPR015197 Peptide-N-glycosidase F, C-terminal NIAKO_RS13740 f6c9c9350da6338c528ea3927bae931b 743 Gene3D G3DSA:2.60.120.230 194 324 7.9E-31 T 23-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 NIAKO_RS13740 f6c9c9350da6338c528ea3927bae931b 743 Gene3D G3DSA:2.60.120.230 51 164 8.5E-11 T 23-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 NIAKO_RS13740 f6c9c9350da6338c528ea3927bae931b 743 SUPERFAMILY SSF49742 193 323 7.32E-26 T 23-04-2016 IPR008977 PHM/PNGase F domain GO:0003824 NIAKO_RS13740 f6c9c9350da6338c528ea3927bae931b 743 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 668 742 3.2E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 Gene3D G3DSA:3.40.50.2300 30 149 1.4E-27 T 23-04-2016 NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 PANTHER PTHR32196 7 306 6.3E-84 T 23-04-2016 NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 Pfam PF13407 Periplasmic binding protein domain 33 287 1.6E-53 T 23-04-2016 IPR025997 Periplasmic binding protein NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 SUPERFAMILY SSF53822 30 310 4.17E-73 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 PANTHER PTHR32196:SF9 7 306 6.3E-84 T 23-04-2016 NIAKO_RS00310 7edfc38b79fbcf3734d9b5e765642e65 315 Gene3D G3DSA:3.40.50.2300 150 310 1.0E-51 T 23-04-2016 NIAKO_RS27790 ead02a1c0bc9a32e164533840b75d81d 142 Pfam PF13673 Acetyltransferase (GNAT) domain 35 142 3.1E-23 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS27790 ead02a1c0bc9a32e164533840b75d81d 142 PANTHER PTHR23091 12 142 8.6E-23 T 23-04-2016 NIAKO_RS27790 ead02a1c0bc9a32e164533840b75d81d 142 Gene3D G3DSA:3.40.630.30 12 140 2.2E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS27790 ead02a1c0bc9a32e164533840b75d81d 142 SUPERFAMILY SSF55729 7 142 4.63E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 Pfam PF00722 Glycosyl hydrolases family 16 83 271 1.8E-32 T 23-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 PANTHER PTHR10963 48 275 1.7E-51 T 23-04-2016 NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 SUPERFAMILY SSF50405 286 404 9.68E-18 T 23-04-2016 IPR008999 Actin cross-linking NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 Gene3D G3DSA:2.80.10.50 287 405 3.9E-16 T 23-04-2016 NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 SUPERFAMILY SSF49899 44 277 4.81E-69 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS03255 7579f3c264d8665534c763bbb2a1807b 406 Gene3D G3DSA:2.60.120.200 43 277 3.9E-73 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 PANTHER PTHR11699 10 460 2.7E-167 T 23-04-2016 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 PIRSF PIRSF036492 1 460 6.5E-174 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 Gene3D G3DSA:3.40.605.10 4 227 3.7E-59 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 Pfam PF00171 Aldehyde dehydrogenase family 21 432 9.0E-91 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 Gene3D G3DSA:3.40.309.10 228 412 1.1E-57 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 SUPERFAMILY SSF53720 3 433 4.19E-119 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS32530 e31397e86794648b75fa2ee472b01dc7 460 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 10 407 42.942 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 PANTHER PTHR11993:SF10 3 402 1.7E-147 T 23-04-2016 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 131 406 1.2E-104 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 54 65 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 SUPERFAMILY SSF56762 27 406 5.23E-108 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 PANTHER PTHR11993 3 402 1.7E-147 T 23-04-2016 NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 Gene3D G3DSA:1.10.645.10 14 242 4.2E-34 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS34775 5e2324dbe85d3c9bb3bdfa55301d0180 407 Gene3D G3DSA:1.10.645.10 243 393 1.2E-10 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS02125 5b93888c7a9f6e58295b15548fed43c7 421 SUPERFAMILY SSF48452 2 420 5.69E-100 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02125 5b93888c7a9f6e58295b15548fed43c7 421 Pfam PF07980 SusD family 276 420 1.2E-26 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS02125 5b93888c7a9f6e58295b15548fed43c7 421 Pfam PF14322 Starch-binding associating with outer membrane 58 188 1.7E-29 T 23-04-2016 NIAKO_RS02125 5b93888c7a9f6e58295b15548fed43c7 421 Gene3D G3DSA:1.25.40.10 172 367 1.5E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24190 99349db932ed09492320cf33b40e8046 181 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24190 99349db932ed09492320cf33b40e8046 181 PANTHER PTHR11560 1 181 2.3E-27 T 23-04-2016 NIAKO_RS24190 99349db932ed09492320cf33b40e8046 181 SUPERFAMILY SSF160369 1 178 7.45E-36 T 23-04-2016 NIAKO_RS24190 99349db932ed09492320cf33b40e8046 181 Pfam PF00466 Ribosomal protein L10 1 99 2.9E-21 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 Hamap MF_00995 Chorismate dehydratase [mqnA]. 12 256 25.232 T 23-04-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 PANTHER PTHR37690 4 250 2.8E-45 T 23-04-2016 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 Gene3D G3DSA:3.40.190.10 84 178 2.1E-26 T 23-04-2016 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 Pfam PF02621 Menaquinone biosynthesis 11 249 7.9E-47 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 Gene3D G3DSA:3.40.190.10 179 251 8.5E-33 T 23-04-2016 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 Gene3D G3DSA:3.40.190.10 9 83 8.5E-33 T 23-04-2016 NIAKO_RS14850 b78056d53f1962c5b30003033be12d74 259 SUPERFAMILY SSF53850 11 251 8.69E-59 T 23-04-2016 NIAKO_RS08010 c99986df76e29278606eab6f5e615fae 436 Pfam PF11013 Protein of unknown function (DUF2851) 3 372 2.2E-131 T 23-04-2016 IPR021272 Protein of unknown function DUF2851 NIAKO_RS34595 4be4df5a9cefc19220e1bd8572428b85 134 Pfam PF01479 S4 domain 12 56 3.0E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34595 4be4df5a9cefc19220e1bd8572428b85 134 Gene3D G3DSA:3.10.290.10 7 93 8.9E-26 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34595 4be4df5a9cefc19220e1bd8572428b85 134 SMART SM00363 11 71 7.4E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34595 4be4df5a9cefc19220e1bd8572428b85 134 PIRSF PIRSF016821 8 134 1.8E-38 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 NIAKO_RS34595 4be4df5a9cefc19220e1bd8572428b85 134 SUPERFAMILY SSF55174 9 95 2.75E-21 T 23-04-2016 NIAKO_RS05130 4ccf17252aef0f665bc002eea27870ab 152 Gene3D G3DSA:2.10.230.10 11 53 3.4E-4 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 PANTHER PTHR34606 3 218 2.6E-48 T 23-04-2016 NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 SMART SM00749 8 72 9.8 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 SMART SM00749 83 145 29.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 SMART SM00749 154 217 4.9E-6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 Pfam PF04972 BON domain 3 69 3.9E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 Pfam PF04972 BON domain 78 146 3.3E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 Pfam PF04972 BON domain 151 216 1.5E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS09310 c18876381a8ee0f9222f80bf755db304 222 PANTHER PTHR34606:SF2 3 218 2.6E-48 T 23-04-2016 NIAKO_RS32250 0790564ae74a981b6a75fd042ed08abe 453 PANTHER PTHR30026 4 451 1.4E-39 T 23-04-2016 NIAKO_RS32250 0790564ae74a981b6a75fd042ed08abe 453 Pfam PF02321 Outer membrane efflux protein 266 449 5.5E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS32250 0790564ae74a981b6a75fd042ed08abe 453 Pfam PF02321 Outer membrane efflux protein 39 239 3.0E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS32250 0790564ae74a981b6a75fd042ed08abe 453 Gene3D G3DSA:1.20.1600.10 31 449 1.1E-51 T 23-04-2016 NIAKO_RS32250 0790564ae74a981b6a75fd042ed08abe 453 SUPERFAMILY SSF56954 10 450 1.28E-68 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 SMART SM00813 324 499 2.5E-24 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 PANTHER PTHR31776:SF1 23 278 1.5E-104 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 PANTHER PTHR31776:SF1 298 504 1.5E-104 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 SUPERFAMILY SSF51445 56 387 1.94E-71 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 PANTHER PTHR31776 23 278 1.5E-104 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 PANTHER PTHR31776 298 504 1.5E-104 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 SUPERFAMILY SSF51011 371 504 5.75E-22 T 23-04-2016 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 324 499 4.0E-18 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS12040 2a876adac8b2e283bd0c09ec077e127a 510 Gene3D G3DSA:3.20.20.80 74 333 1.0E-18 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS32500 ba217a2bea6e26dee950f100a658d75b 332 PIRSF PIRSF018266 1 331 2.1E-63 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS32500 ba217a2bea6e26dee950f100a658d75b 332 Pfam PF04773 FecR protein 127 219 6.0E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS32500 ba217a2bea6e26dee950f100a658d75b 332 PANTHER PTHR30273:SF2 1 331 5.3E-68 T 23-04-2016 NIAKO_RS32500 ba217a2bea6e26dee950f100a658d75b 332 PANTHER PTHR30273 1 331 5.3E-68 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS32500 ba217a2bea6e26dee950f100a658d75b 332 Pfam PF16344 Domain of unknown function (DUF4974) 230 327 8.4E-20 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Pfam PF00535 Glycosyl transferase family 2 405 571 1.0E-24 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Gene3D G3DSA:3.90.550.10 402 653 7.6E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 SUPERFAMILY SSF53756 675 1033 7.33E-30 T 23-04-2016 NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Pfam PF08241 Methyltransferase domain 41 138 9.0E-21 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Gene3D G3DSA:3.40.50.150 661 736 2.7E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 SUPERFAMILY SSF53335 23 173 6.72E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 PANTHER PTHR22916 349 677 4.4E-49 T 23-04-2016 NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Gene3D G3DSA:3.40.50.150 18 143 4.8E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Gene3D G3DSA:3.40.50.150 738 800 4.8E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 SUPERFAMILY SSF53448 399 674 4.29E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27345 4116c2c86ec5c0ad5c8ec274476264e9 1035 Pfam PF13692 Glycosyl transferases group 1 865 1001 4.2E-23 T 23-04-2016 NIAKO_RS04030 b23d6ac2c31bb49ad4ebfd5670ad33c1 636 Gene3D G3DSA:2.60.40.10 325 392 1.1E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS04030 b23d6ac2c31bb49ad4ebfd5670ad33c1 636 Pfam PF13585 C-terminal domain of CHU protein family 551 634 1.6E-21 T 23-04-2016 NIAKO_RS04030 b23d6ac2c31bb49ad4ebfd5670ad33c1 636 SUPERFAMILY SSF48726 324 401 5.53E-5 T 23-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 NIAKO_RS04030 b23d6ac2c31bb49ad4ebfd5670ad33c1 636 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 552 636 7.2E-20 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS03330 ef7b16cd9101dadb19c145a586df58dd 485 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 55 352 1.4E-24 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT NIAKO_RS03330 ef7b16cd9101dadb19c145a586df58dd 485 PANTHER PTHR13285:SF24 1 448 5.9E-122 T 23-04-2016 NIAKO_RS03330 ef7b16cd9101dadb19c145a586df58dd 485 PANTHER PTHR13285 1 448 5.9E-122 T 23-04-2016 NIAKO_RS03330 ef7b16cd9101dadb19c145a586df58dd 485 PIRSF PIRSF016636 1 485 8.8E-144 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB NIAKO_RS03330 ef7b16cd9101dadb19c145a586df58dd 485 PIRSF PIRSF500217 1 485 1.5E-145 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 PANTHER PTHR30158 31 356 2.4E-112 T 23-04-2016 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 PANTHER PTHR30158:SF6 31 356 2.4E-112 T 23-04-2016 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 260 7.4E-20 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 SUPERFAMILY SSF111369 44 261 1.7E-47 T 23-04-2016 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 342 3.6E-68 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 Gene3D G3DSA:2.40.50.100 151 182 3.0E-18 T 23-04-2016 NIAKO_RS35195 7bbebeee25c3aa7863773fba47db1683 360 Gene3D G3DSA:2.40.50.100 57 90 3.0E-18 T 23-04-2016 NIAKO_RS24075 b99f69f87d4f815412e5b4c1fb615d57 107 Gene3D G3DSA:3.10.450.50 2 41 4.4E-4 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS24075 b99f69f87d4f815412e5b4c1fb615d57 107 SUPERFAMILY SSF54427 10 59 3.19E-5 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 SUPERFAMILY SSF52172 5 131 1.85E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 Pfam PF04397 LytTr DNA-binding domain 155 240 6.2E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 Gene3D G3DSA:3.40.50.2300 5 127 5.5E-31 T 23-04-2016 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 SMART SM00448 7 115 1.2E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 Gene3D G3DSA:2.40.50.40 143 209 3.5E-13 T 23-04-2016 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 Pfam PF00072 Response regulator receiver domain 9 115 4.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 SMART SM00850 151 246 9.4E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS11880 4300ca65bf370c4289b984ae242f12ab 248 PANTHER PTHR26402 7 119 3.0E-32 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 SUPERFAMILY SSF82171 220 603 8.83E-12 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Gene3D G3DSA:2.120.10.30 460 554 4.2E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Gene3D G3DSA:2.120.10.30 35 78 4.2E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Gene3D G3DSA:2.120.10.30 235 306 4.2E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 SUPERFAMILY SSF53474 711 968 1.79E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Pfam PF00326 Prolyl oligopeptidase family 788 967 2.6E-24 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 PANTHER PTHR11731 700 979 1.6E-108 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 PANTHER PTHR11731 517 668 1.6E-108 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 PANTHER PTHR11731:SF142 700 979 1.6E-108 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 PANTHER PTHR11731:SF142 517 668 1.6E-108 T 23-04-2016 NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Gene3D G3DSA:3.40.50.1820 335 391 1.3E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS21665 ce8ffd31cd63665ad9649dcf55abc769 999 Gene3D G3DSA:3.40.50.1820 701 966 1.3E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 PANTHER PTHR30580 1 191 2.0E-224 T 23-04-2016 NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 PANTHER PTHR30580 213 821 2.0E-224 T 23-04-2016 NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Pfam PF00270 DEAD/DEAH box helicase 286 447 3.3E-12 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 SUPERFAMILY SSF52540 282 461 1.04E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 820 22.968 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Gene3D G3DSA:3.40.50.300 584 723 4.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Gene3D G3DSA:3.40.50.300 500 519 4.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Pfam PF00271 Helicase conserved C-terminal domain 584 679 1.1E-8 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 SMART SM00487 281 479 5.6E-20 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 TIGRFAM TIGR00595 priA: primosomal protein N' 307 796 9.8E-174 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 Gene3D G3DSA:3.40.50.300 281 468 1.4E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 SUPERFAMILY SSF52540 550 723 4.79E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14380 6ee1dace8d74a656908fac2a38de4514 821 SMART SM00490 583 680 3.9E-8 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS33380 ad97338ebb484c4b19448388392767e2 388 Pfam PF00534 Glycosyl transferases group 1 206 349 2.0E-16 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS33380 ad97338ebb484c4b19448388392767e2 388 Gene3D G3DSA:3.40.50.2000 205 364 3.1E-8 T 23-04-2016 NIAKO_RS33380 ad97338ebb484c4b19448388392767e2 388 SUPERFAMILY SSF53756 14 384 1.1E-32 T 23-04-2016 NIAKO_RS33380 ad97338ebb484c4b19448388392767e2 388 PANTHER PTHR12526:SF301 205 386 2.9E-13 T 23-04-2016 NIAKO_RS33380 ad97338ebb484c4b19448388392767e2 388 PANTHER PTHR12526 205 386 2.9E-13 T 23-04-2016 NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 Pfam PF13411 MerR HTH family regulatory protein 93 161 1.1E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 SUPERFAMILY SSF46955 93 179 1.47E-14 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 Gene3D G3DSA:1.10.1660.10 93 176 9.9E-14 T 23-04-2016 NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 PANTHER PTHR30204:SF15 85 190 3.0E-18 T 23-04-2016 NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 PANTHER PTHR30204 85 190 3.0E-18 T 23-04-2016 NIAKO_RS37280 0ff73e474c74f77e1f385699c6822512 190 SMART SM00422 93 163 7.2E-4 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF56935 432 781 2.49E-91 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF56935 104 247 2.49E-91 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF56935 883 927 2.49E-91 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF56935 979 1073 2.49E-91 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF56935 304 392 2.49E-91 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.40.170.20 892 937 4.7E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.40.170.20 989 1073 4.7E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.40.170.20 427 795 4.7E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.40.170.20 313 393 4.7E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.40.170.20 225 243 4.7E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.60.40.1120 25 110 1.9E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532 808 1071 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532 505 791 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532 419 460 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532 4 358 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 199 229 8.9E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532:SF57 808 1071 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532:SF57 505 791 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532:SF57 419 460 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 PANTHER PTHR11532:SF57 4 358 3.2E-249 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 223 3.5E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1073 4.1E-257 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Pfam PF13715 CarboxypepD_reg-like domain 25 108 2.6E-16 T 23-04-2016 NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 SUPERFAMILY SSF49464 23 106 6.54E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS26105 b78db7db2496c98ebd6d84dbd50ed58d 1073 Gene3D G3DSA:2.170.130.10 111 224 1.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 PANTHER PTHR10166:SF15 151 400 8.1E-87 T 23-04-2016 NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 SUPERFAMILY SSF53300 121 324 2.62E-36 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 Pfam PF12034 Domain of unknown function (DUF3520) 330 491 2.1E-46 T 23-04-2016 IPR021908 Protein of unknown function DUF3520 NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 Pfam PF12450 von Willebrand factor 51 137 4.0E-31 T 23-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 SMART SM00327 152 328 1.8E-22 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 Gene3D G3DSA:3.40.50.410 153 325 8.8E-25 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 PANTHER PTHR10166 151 400 8.1E-87 T 23-04-2016 NIAKO_RS29710 d4229f805992742baac5e4cf6ef9aeb1 492 Pfam PF00092 von Willebrand factor type A domain 156 324 1.1E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 PANTHER PTHR38469 1 719 5.5E-174 T 23-04-2016 NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 PANTHER PTHR38469:SF1 1 719 5.5E-174 T 23-04-2016 NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 Gene3D G3DSA:2.40.10.10 625 701 1.4E-11 T 23-04-2016 NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 SUPERFAMILY SSF50494 176 285 7.35E-27 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 SUPERFAMILY SSF50494 637 713 7.35E-27 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 SUPERFAMILY SSF50494 35 98 7.35E-27 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS30495 b5e06c770a58d5418efd15c06f790eea 721 Pfam PF10459 Peptidase S46 19 717 9.8E-222 T 23-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 5.6E-303 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:3.30.2090.10 725 809 3.2E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 38 127 1.54E-22 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82714 183 273 1.18E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:1.20.1640.10 294 509 4.5E-61 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:1.10.3850.10 816 1031 8.4E-52 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.2E-91 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:3.30.70.1430 38 140 1.6E-27 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 570 673 8.89E-26 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:3.30.70.1430 572 673 4.3E-28 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 275 332 2.04E-20 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 135 182 2.04E-20 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PANTHER PTHR32063:SF9 1 1056 0.0 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82714 725 810 9.16E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82866 297 499 2.75E-51 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 674 724 5.23E-21 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82693 811 860 5.23E-21 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 SUPERFAMILY SSF82866 834 1030 1.09E-39 T 23-04-2016 NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 Gene3D G3DSA:3.30.2090.10 182 274 1.9E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS35200 7a4d256119715d4c29be7887f40be243 1057 PANTHER PTHR32063 1 1056 0.0 T 23-04-2016 NIAKO_RS01215 45e52b3c7ef3b5adc71cef29c480676d 158 Pfam PF01584 CheW-like domain 10 148 4.5E-27 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS01215 45e52b3c7ef3b5adc71cef29c480676d 158 PANTHER PTHR22617 10 154 1.4E-34 T 23-04-2016 NIAKO_RS01215 45e52b3c7ef3b5adc71cef29c480676d 158 Gene3D G3DSA:2.40.50.180 47 86 9.6E-7 T 23-04-2016 NIAKO_RS01215 45e52b3c7ef3b5adc71cef29c480676d 158 SUPERFAMILY SSF50341 9 149 6.8E-31 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS01215 45e52b3c7ef3b5adc71cef29c480676d 158 SMART SM00260 5 146 9.9E-25 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 SMART SM00841 130 185 2.9E-27 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Gene3D G3DSA:2.30.30.30 3 60 3.2E-14 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 PIRSF PIRSF005901 1 187 1.9E-56 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 SUPERFAMILY SSF50249 65 127 1.68E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 PANTHER PTHR30053 1 187 3.3E-67 T 23-04-2016 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 SMART SM01185 67 122 1.9E-20 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Gene3D G3DSA:2.40.50.140 64 127 8.0E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 39.786 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 SUPERFAMILY SSF50104 1 61 1.14E-10 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 8.5E-63 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 114 1.2E-16 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Gene3D G3DSA:2.40.50.140 130 186 3.7E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 SUPERFAMILY SSF50249 130 186 2.57E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 59 6.7E-12 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 NIAKO_RS01525 4ad10beb2fcdfd5e1df1d7cd1843385e 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 5.2E-25 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 NIAKO_RS25035 144b81a53fd900adc6d9b1840ca8faa8 818 Gene3D G3DSA:2.60.40.1190 17 203 1.6E-26 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS25035 144b81a53fd900adc6d9b1840ca8faa8 818 SUPERFAMILY SSF49344 15 215 5.49E-35 T 23-04-2016 NIAKO_RS25035 144b81a53fd900adc6d9b1840ca8faa8 818 SUPERFAMILY SSF56935 631 767 5.13E-5 T 23-04-2016 NIAKO_RS25035 144b81a53fd900adc6d9b1840ca8faa8 818 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 21 170 0.002 T 23-04-2016 NIAKO_RS25035 144b81a53fd900adc6d9b1840ca8faa8 818 Pfam PF06452 Carbohydrate family 9 binding domain-like 23 186 2.7E-10 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS33920 dd94cc7677657d63d0165cd048251358 441 SUPERFAMILY SSF56935 59 441 1.8E-7 T 23-04-2016 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 PANTHER PTHR30173 7 189 2.9E-36 T 23-04-2016 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 Gene3D G3DSA:1.10.10.10 115 180 9.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 178 4.2E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 23 178 1.9E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 PANTHER PTHR30173:SF20 7 189 2.9E-36 T 23-04-2016 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 SUPERFAMILY SSF88659 113 179 2.09E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 Pfam PF08281 Sigma-70, region 4 122 172 1.6E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 Pfam PF04542 Sigma-70 region 2 26 92 1.4E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 Gene3D G3DSA:1.10.1740.10 9 98 2.2E-19 T 23-04-2016 NIAKO_RS18025 9f6a5a8ae9370bbc9ab3294c89bbae08 207 SUPERFAMILY SSF88946 9 93 2.35E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30405 204707c65bc2ef55707cbbdf27895343 452 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 57 450 1.1E-76 T 23-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 PIRSF PIRSF000370 8 205 5.0E-53 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 Pfam PF13394 4Fe-4S single cluster domain 31 112 1.6E-11 T 23-04-2016 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 PANTHER PTHR11228 5 204 3.1E-30 T 23-04-2016 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 PANTHER PTHR11228:SF6 5 204 3.1E-30 T 23-04-2016 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 Pfam PF04055 Radical SAM superfamily 33 117 6.9E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 SUPERFAMILY SSF102114 22 109 4.19E-9 T 23-04-2016 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 10 205 34.354 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 NIAKO_RS00825 97a39953d763045f9f1208235c45a19b 205 Gene3D G3DSA:3.20.20.70 35 108 2.1E-8 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 Gene3D G3DSA:3.30.1460.10 234 358 1.0E-7 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 Gene3D G3DSA:2.40.10.10 95 182 1.4E-32 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 SUPERFAMILY SSF69635 213 358 4.71E-11 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 SUPERFAMILY SSF50494 3 179 3.47E-46 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 Pfam PF13365 Trypsin-like peptidase domain 23 154 1.9E-26 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 PANTHER PTHR22939 21 181 3.1E-47 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 Gene3D G3DSA:2.40.10.10 16 94 5.0E-17 T 23-04-2016 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 PRINTS PR00834 HtrA/DegQ protease family signature 32 44 7.7E-17 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 PRINTS PR00834 HtrA/DegQ protease family signature 147 164 7.7E-17 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 PRINTS PR00834 HtrA/DegQ protease family signature 53 73 7.7E-17 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS31315 6c2b99375aabbc70bc6bc3c3335532a7 365 PRINTS PR00834 HtrA/DegQ protease family signature 94 118 7.7E-17 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Hamap MF_01953 Urease subunit alpha [ureC]. 3 573 57.273 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Pfam PF01979 Amidohydrolase family 130 459 2.9E-76 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Gene3D G3DSA:2.30.40.10 71 148 3.4E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 ProSitePatterns PS00145 Urease active site. 322 338 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 SUPERFAMILY SSF51338 415 485 1.37E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 123 1.9E-58 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Gene3D G3DSA:3.20.20.140 149 435 9.9E-206 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 Gene3D G3DSA:3.20.20.140 494 571 9.9E-206 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PANTHER PTHR22642:SF7 325 507 7.8E-251 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PANTHER PTHR22642:SF7 26 301 7.8E-251 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 5 573 1.7E-293 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 407 422 5.7E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 433 446 5.7E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 5.7E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 5.7E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PANTHER PTHR22642 325 507 7.8E-251 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 PANTHER PTHR22642 26 301 7.8E-251 T 23-04-2016 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 SUPERFAMILY SSF51338 4 182 3.87E-63 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 SUPERFAMILY SSF51556 486 573 4.77E-196 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS02200 3eb1b8f26ac2ebee8d9e2b512f3f1ce8 573 SUPERFAMILY SSF51556 135 437 4.77E-196 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 SUPERFAMILY SSF51735 36 197 1.79E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 PANTHER PTHR22604:SF101 5 200 4.7E-119 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 PANTHER PTHR22604:SF101 218 427 4.7E-119 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 PANTHER PTHR22604 5 200 4.7E-119 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 PANTHER PTHR22604 218 427 4.7E-119 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 SUPERFAMILY SSF55347 173 200 5.01E-20 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 SUPERFAMILY SSF55347 241 404 5.01E-20 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 232 261 0.058 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 Gene3D G3DSA:3.40.50.720 38 187 8.5E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 Gene3D G3DSA:3.30.360.10 240 391 2.5E-12 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 Gene3D G3DSA:3.30.360.10 188 208 2.5E-12 T 23-04-2016 NIAKO_RS07920 d51a8e8707cffc482f580e80e695c4fe 479 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 46 165 6.0E-18 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS06510 e220a6644794cc70d1af947a3abb8cd4 468 PANTHER PTHR38165 7 468 8.7E-18 T 23-04-2016 NIAKO_RS06510 e220a6644794cc70d1af947a3abb8cd4 468 Pfam PF16483 Beta-1,3-glucanase 43 461 2.1E-76 T 23-04-2016 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 PIRSF PIRSF017617 1 339 9.0E-131 T 23-04-2016 IPR023603 Threonine aldolase NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 Gene3D G3DSA:3.90.1150.10 249 335 2.3E-20 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 PANTHER PTHR10289:SF5 2 335 1.4E-144 T 23-04-2016 NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 Pfam PF01212 Beta-eliminating lyase 4 284 3.6E-87 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 SUPERFAMILY SSF53383 3 336 1.39E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 PANTHER PTHR10289 2 335 1.4E-144 T 23-04-2016 NIAKO_RS05675 ee9755c9731c6401795607284123e037 340 Gene3D G3DSA:3.40.640.10 2 248 6.4E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 Gene3D G3DSA:1.10.10.60 317 361 1.8E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 331 346 2.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 346 362 2.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 Gene3D G3DSA:1.10.10.60 267 316 9.0E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 PANTHER PTHR11019 255 366 3.7E-24 T 23-04-2016 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 316 358 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 SUPERFAMILY SSF46689 315 362 5.38E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 Pfam PF12833 Helix-turn-helix domain 286 362 2.1E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 Gene3D G3DSA:3.30.70.1230 132 244 2.0E-9 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 SMART SM00342 279 362 1.6E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 SUPERFAMILY SSF55073 132 244 3.92E-14 T 23-04-2016 IPR029787 Nucleotide cyclase NIAKO_RS22695 f659d93ff447c525599f697b36cf94bd 366 Pfam PF14026 Protein of unknown function (DUF4242) 4 78 3.8E-20 T 23-04-2016 IPR025336 Protein of unknown function DUF4242 NIAKO_RS07230 c7407158c9e87252a18667a4769e680f 425 Pfam PF16405 Domain of unknown function (DUF5013) 264 403 4.7E-35 T 23-04-2016 IPR032181 Domain of unknown function DUF5013 NIAKO_RS07230 c7407158c9e87252a18667a4769e680f 425 Pfam PF16389 Domain of unknown function 44 247 2.4E-56 T 23-04-2016 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 Pfam PF00809 Pterin binding enzyme 19 258 1.3E-68 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 Gene3D G3DSA:3.20.20.20 14 274 1.3E-93 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 272 1.8E-88 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 PANTHER PTHR20941:SF1 9 273 5.0E-103 T 23-04-2016 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 PANTHER PTHR20941 9 273 5.0E-103 T 23-04-2016 NIAKO_RS09945 90949321354566d7d3ff341433644bd9 275 SUPERFAMILY SSF51717 4 274 1.7E-88 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 NIAKO_RS30615 ba156714a42b701376bd56285f108e0d 267 Pfam PF13645 L,D-transpeptidase catalytic domain 75 241 4.2E-67 T 23-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain NIAKO_RS30615 ba156714a42b701376bd56285f108e0d 267 PANTHER PTHR38477:SF1 9 254 2.8E-69 T 23-04-2016 NIAKO_RS30615 ba156714a42b701376bd56285f108e0d 267 PANTHER PTHR38477 9 254 2.8E-69 T 23-04-2016 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 247 34.753 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 155 169 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 34 49 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 247 3.9E-77 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 PANTHER PTHR10108:SF24 15 248 4.2E-70 T 23-04-2016 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 Gene3D G3DSA:3.40.50.150 21 243 1.3E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 SUPERFAMILY SSF53335 12 237 1.72E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 247 1.5E-63 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NIAKO_RS27270 89a27a483e4ea7fd2abdec50a7dc0c77 250 PANTHER PTHR10108 15 248 4.2E-70 T 23-04-2016 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 Gene3D G3DSA:1.20.1080.10 1 205 6.1E-48 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PANTHER PTHR19139:SF103 1 202 9.1E-49 T 23-04-2016 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 114 132 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 184 204 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 34 58 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 146 168 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PRINTS PR00783 Major intrinsic protein family signature 71 90 1.2E-38 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 PANTHER PTHR19139 1 202 9.1E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 SUPERFAMILY SSF81338 1 203 4.97E-47 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 Pfam PF00230 Major intrinsic protein 2 201 3.9E-34 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS00210 98a9f8f2ade1887f2220fbf6f102086f 209 ProSitePatterns PS00221 MIP family signature. 52 60 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 NIAKO_RS18855 1ca5191ccb3699004544010576558e2f 156 Gene3D G3DSA:3.40.30.10 5 63 1.6E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18855 1ca5191ccb3699004544010576558e2f 156 SUPERFAMILY SSF52833 44 155 6.09E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18855 1ca5191ccb3699004544010576558e2f 156 Gene3D G3DSA:3.40.30.10 64 155 1.8E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18855 1ca5191ccb3699004544010576558e2f 156 Pfam PF13098 Thioredoxin-like domain 56 146 8.8E-12 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 PANTHER PTHR10196 1 494 3.2E-247 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 PIRSF PIRSF000538 2 494 2.0E-183 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 3.7E-81 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 PANTHER PTHR10196:SF9 1 494 3.2E-247 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 Gene3D G3DSA:3.30.420.40 251 491 5.8E-98 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 6.2E-63 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 Gene3D G3DSA:3.30.420.40 2 250 1.6E-104 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 SUPERFAMILY SSF53067 251 478 1.54E-82 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 492 57.715 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 SUPERFAMILY SSF53067 4 252 1.19E-94 T 23-04-2016 NIAKO_RS03510 fc1ce6259bd5afcfbf9ecf9bd5acda18 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 489 5.4E-221 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS31180 6a29014550f8c2d30d995f8e99cd545b 77 PANTHER PTHR33238 1 77 1.7E-19 T 23-04-2016 NIAKO_RS31180 6a29014550f8c2d30d995f8e99cd545b 77 SMART SM00899 2 73 2.4E-18 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NIAKO_RS31180 6a29014550f8c2d30d995f8e99cd545b 77 Pfam PF04023 FeoA domain 3 72 1.6E-13 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NIAKO_RS31180 6a29014550f8c2d30d995f8e99cd545b 77 SUPERFAMILY SSF50037 5 74 5.95E-18 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 PANTHER PTHR23409 1 323 6.6E-222 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 Pfam PF00268 Ribonucleotide reductase, small chain 15 280 6.8E-121 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 SUPERFAMILY SSF47240 3 305 1.11E-115 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 PANTHER PTHR23409:SF18 1 323 6.6E-222 T 23-04-2016 NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 Gene3D G3DSA:1.10.620.20 3 288 3.4E-123 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 NIAKO_RS27000 39cb7667c55c7edb428c479de86a85e3 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 104 120 - T 23-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NIAKO_RS33250 8c916cae4fddbfe0af6c7c71880935af 139 Pfam PF05523 WxcM-like, C-terminal 9 137 8.1E-51 T 23-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 NIAKO_RS33250 8c916cae4fddbfe0af6c7c71880935af 139 SUPERFAMILY SSF51182 9 138 1.76E-40 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS33250 8c916cae4fddbfe0af6c7c71880935af 139 Gene3D G3DSA:2.60.120.10 46 131 5.1E-6 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 SUPERFAMILY SSF53850 118 283 3.98E-10 T 23-04-2016 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 SUPERFAMILY SSF46785 2 79 1.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 Gene3D G3DSA:1.10.10.10 1 80 2.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 PANTHER PTHR30126:SF11 1 280 2.2E-37 T 23-04-2016 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 Pfam PF03466 LysR substrate binding domain 119 288 7.5E-9 T 23-04-2016 IPR005119 LysR, substrate-binding NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 Gene3D G3DSA:3.40.190.10 201 258 1.6E-4 T 23-04-2016 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 Gene3D G3DSA:3.40.190.10 126 193 9.6E-5 T 23-04-2016 NIAKO_RS05435 d2513187b25394519519d29f7fbbb399 306 PANTHER PTHR30126 1 280 2.2E-37 T 23-04-2016 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 399 418 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 356 371 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 21 40 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 61 80 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 87 106 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 125 144 1.5E-16 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 Gene3D G3DSA:3.40.640.10 98 370 1.4E-84 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 299 320 - T 23-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 Gene3D G3DSA:3.90.1150.10 371 482 5.2E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PANTHER PTHR11999:SF70 4 470 1.6E-120 T 23-04-2016 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 PANTHER PTHR11999 4 470 1.6E-120 T 23-04-2016 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 Gene3D G3DSA:1.20.1340.10 17 94 1.2E-12 T 23-04-2016 NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 SUPERFAMILY SSF53383 17 481 3.6E-117 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS28635 1396509d908fcda109cd92d036a535fb 488 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 49 417 8.0E-68 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 NIAKO_RS21205 c2b0e8aa242a470fa69427fb00636c91 292 SUPERFAMILY SSF53167 13 270 4.19E-43 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS21205 c2b0e8aa242a470fa69427fb00636c91 292 Pfam PF01048 Phosphorylase superfamily 31 280 2.4E-32 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS21205 c2b0e8aa242a470fa69427fb00636c91 292 Gene3D G3DSA:3.40.50.1580 23 282 1.1E-64 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS21205 c2b0e8aa242a470fa69427fb00636c91 292 PANTHER PTHR21234 11 282 1.2E-41 T 23-04-2016 IPR018017 Nucleoside phosphorylase NIAKO_RS21205 c2b0e8aa242a470fa69427fb00636c91 292 PANTHER PTHR21234:SF8 11 282 1.2E-41 T 23-04-2016 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 SUPERFAMILY SSF46689 222 268 4.48E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 Pfam PF12833 Helix-turn-helix domain 197 268 2.1E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 Gene3D G3DSA:1.10.10.60 177 223 1.2E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 PANTHER PTHR11019 202 266 7.4E-15 T 23-04-2016 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 PANTHER PTHR11019:SF61 202 266 7.4E-15 T 23-04-2016 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 Gene3D G3DSA:1.10.10.60 224 268 6.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19135 d2885aafbd6ceeb88919456245af3581 273 SMART SM00342 186 269 3.5E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 PANTHER PTHR19446:SF383 1 351 3.7E-75 T 23-04-2016 NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 SUPERFAMILY SSF56672 39 343 7.91E-48 T 23-04-2016 NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 Pfam PF08388 Group II intron, maturase-specific domain 340 407 9.5E-5 T 23-04-2016 IPR013597 Group II intron, maturase-specific NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 42 400 2.1E-101 T 23-04-2016 IPR030931 Group II intron reverse transcriptase/maturase NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 PANTHER PTHR19446 1 351 3.7E-75 T 23-04-2016 NIAKO_RS29720 2063adab046333a014cdcb8a8bb7442c 435 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 88 312 7.0E-40 T 23-04-2016 IPR000477 Reverse transcriptase domain NIAKO_RS10260 50d84f3809e7ad9238b9f87c7e54f731 433 Pfam PF04055 Radical SAM superfamily 188 360 4.4E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS10260 50d84f3809e7ad9238b9f87c7e54f731 433 SUPERFAMILY SSF102114 190 385 5.23E-20 T 23-04-2016 NIAKO_RS10260 50d84f3809e7ad9238b9f87c7e54f731 433 Gene3D G3DSA:3.20.20.70 190 375 4.4E-19 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS10260 50d84f3809e7ad9238b9f87c7e54f731 433 PANTHER PTHR30352:SF5 193 382 7.5E-20 T 23-04-2016 NIAKO_RS10260 50d84f3809e7ad9238b9f87c7e54f731 433 PANTHER PTHR30352 193 382 7.5E-20 T 23-04-2016 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 Pfam PF12833 Helix-turn-helix domain 223 300 5.2E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 PANTHER PTHR11019:SF50 25 302 3.2E-29 T 23-04-2016 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 SUPERFAMILY SSF46689 255 302 7.17E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 Gene3D G3DSA:1.10.10.60 254 301 1.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 PANTHER PTHR11019 25 302 3.2E-29 T 23-04-2016 NIAKO_RS11095 f4cc64be7a11868aabd2da18a1e2def1 303 SMART SM00342 216 299 8.2E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 Gene3D G3DSA:2.160.20.10 27 397 1.4E-108 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 Gene3D G3DSA:2.160.20.10 468 730 3.9E-30 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 Pfam PF14592 Chondroitinase B 28 399 8.8E-112 T 23-04-2016 NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 688 712 6300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 329 349 950.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 598 620 14.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 359 390 7500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 630 652 2100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 243 264 1400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SMART SM00710 265 290 190.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SUPERFAMILY SSF51126 468 730 6.97E-25 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS25685 a6d5f34decdcbe0de8e2de786a1bbfca 747 SUPERFAMILY SSF51126 27 398 9.83E-84 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 Gene3D G3DSA:3.50.30.60 205 335 8.0E-37 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 PIRSF PIRSF028757 34 340 5.7E-83 T 23-04-2016 IPR003507 Peptidase family S66 NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 PANTHER PTHR30237 34 339 4.1E-78 T 23-04-2016 NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 SUPERFAMILY SSF52317 35 197 1.83E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 PANTHER PTHR30237:SF2 34 339 4.1E-78 T 23-04-2016 NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 Pfam PF02016 LD-carboxypeptidase 46 326 2.0E-75 T 23-04-2016 IPR003507 Peptidase family S66 NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 Gene3D G3DSA:3.40.50.10740 34 199 1.5E-45 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain NIAKO_RS36110 eff75ab9fb069831cd98d801c9e297b5 340 SUPERFAMILY SSF141986 181 333 1.24E-35 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 Gene3D G3DSA:1.20.5.620 67 125 4.2E-11 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 SUPERFAMILY SSF81573 67 125 1.31E-9 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 15 161 7.7E-30 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 Pfam PF00430 ATP synthase B/B' CF(0) 11 140 2.0E-29 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 PANTHER PTHR33445 1 163 7.6E-35 T 23-04-2016 NIAKO_RS33995 7c7af7ddf609085e2213866c6775a598 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 163 12.587 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NIAKO_RS30280 f5fc5d939acc1104d1d1b3ec65fb945c 128 Pfam PF01042 Endoribonuclease L-PSP 8 125 5.0E-25 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS30280 f5fc5d939acc1104d1d1b3ec65fb945c 128 PANTHER PTHR11803 18 128 1.1E-25 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS30280 f5fc5d939acc1104d1d1b3ec65fb945c 128 Gene3D G3DSA:3.30.1330.40 9 127 1.6E-37 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS30280 f5fc5d939acc1104d1d1b3ec65fb945c 128 SUPERFAMILY SSF55298 9 126 4.56E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Pfam PF13715 CarboxypepD_reg-like domain 36 117 2.9E-15 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Gene3D G3DSA:2.60.40.1120 36 105 2.1E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 241 1.2E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 217 247 1.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Gene3D G3DSA:2.170.130.10 115 245 2.4E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532 1 367 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532 847 1056 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532 462 829 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532:SF57 1 367 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532:SF57 847 1056 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 PANTHER PTHR11532:SF57 462 829 3.0E-256 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Gene3D G3DSA:2.40.170.20 964 1056 7.0E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Gene3D G3DSA:2.40.170.20 866 909 7.0E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 Gene3D G3DSA:2.40.170.20 321 778 7.0E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 34 1058 1.1E-249 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF49464 35 115 1.31E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF56935 868 912 1.37E-89 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF56935 113 265 1.37E-89 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF56935 313 401 1.37E-89 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF56935 967 1057 1.37E-89 T 23-04-2016 NIAKO_RS11740 504cef772163e96c58ed243407f51abb 1060 SUPERFAMILY SSF56935 434 778 1.37E-89 T 23-04-2016 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 Gene3D G3DSA:1.20.1560.10 32 347 1.5E-82 T 23-04-2016 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 PANTHER PTHR24221 13 610 1.3E-254 T 23-04-2016 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 SMART SM00382 392 578 1.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 Gene3D G3DSA:3.40.50.300 364 595 3.2E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 Pfam PF00005 ABC transporter 383 532 5.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 Pfam PF00664 ABC transporter transmembrane region 46 316 1.9E-59 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 SUPERFAMILY SSF52540 357 603 3.77E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS10195 c96e3f06dd4b65e7ecaef718b6ef85f2 610 SUPERFAMILY SSF90123 32 344 1.83E-76 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 Pfam PF01979 Amidohydrolase family 280 412 2.7E-11 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 PANTHER PTHR22642 5 412 1.7E-126 T 23-04-2016 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 PANTHER PTHR22642:SF1 5 412 1.7E-126 T 23-04-2016 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 412 38.328 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 TIGRFAM TIGR01224 hutI: imidazolonepropionase 34 412 1.2E-120 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 SUPERFAMILY SSF51556 75 374 6.81E-74 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 Gene3D G3DSA:2.30.40.10 32 87 1.0E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 Gene3D G3DSA:3.20.20.140 88 369 3.3E-34 T 23-04-2016 NIAKO_RS10825 6e85086032eb751b4a76cbab214cb209 412 SUPERFAMILY SSF51338 4 68 5.76E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 SUPERFAMILY SSF53187 9 206 3.29E-79 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 SUPERFAMILY SSF53187 306 390 3.29E-79 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 Gene3D G3DSA:3.40.630.10 303 394 1.5E-89 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 Gene3D G3DSA:3.40.630.10 7 187 1.5E-89 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 Pfam PF07687 Peptidase dimerisation domain 195 286 4.4E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 PANTHER PTHR11014 6 396 9.0E-132 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 PANTHER PTHR11014:SF63 6 396 9.0E-132 T 23-04-2016 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 PIRSF PIRSF005962 6 398 9.9E-115 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 SUPERFAMILY SSF55031 194 299 5.23E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 Pfam PF01546 Peptidase family M20/M25/M40 79 376 8.2E-29 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 Gene3D G3DSA:3.30.70.360 190 301 8.9E-34 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS18615 0afc10779bb320280778304497b3756c 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 380 2.2E-105 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Pfam PF01225 Mur ligase family, catalytic domain 10 107 4.2E-14 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 PANTHER PTHR23135:SF5 2 449 1.6E-139 T 23-04-2016 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 SUPERFAMILY SSF53244 309 455 7.33E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 395 1.3E-20 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 PANTHER PTHR23135 2 449 1.6E-139 T 23-04-2016 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Gene3D G3DSA:3.40.1190.10 96 311 7.4E-60 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 9 452 3.3E-114 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 SUPERFAMILY SSF53623 94 307 4.97E-54 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Gene3D G3DSA:3.90.190.20 312 458 6.1E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 7 461 31.918 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Gene3D G3DSA:3.40.50.720 9 95 2.3E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 SUPERFAMILY SSF51984 8 95 3.14E-22 T 23-04-2016 NIAKO_RS36030 4b30409ed9916ef4a3e3b462522570dd 462 Pfam PF08245 Mur ligase middle domain 113 290 9.1E-25 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SUPERFAMILY SSF52200 7 108 1.96E-14 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF13676 TIR domain 19 109 7.8E-13 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Gene3D G3DSA:2.130.10.10 502 768 6.6E-60 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 549 563 - T 23-04-2016 IPR019775 WD40 repeat, conserved site NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 673 687 - T 23-04-2016 IPR019775 WD40 repeat, conserved site NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 632 646 - T 23-04-2016 IPR019775 WD40 repeat, conserved site NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SUPERFAMILY SSF50998 662 951 1.18E-43 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 524 562 1.7E-6 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 911 944 0.0046 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 816 858 0.2 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 608 644 1.1E-4 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 660 685 0.069 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 570 603 0.0013 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Pfam PF00400 WD domain, G-beta repeat 864 899 0.0015 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 PANTHER PTHR22847 762 995 2.0E-98 T 23-04-2016 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 PANTHER PTHR22847 260 719 2.0E-98 T 23-04-2016 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SUPERFAMILY SSF50998 415 737 1.57E-63 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SUPERFAMILY SSF63829 311 467 7.19E-21 T 23-04-2016 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 606 645 8.3E-7 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 314 352 20.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 565 604 8.7E-8 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 523 562 1.5E-8 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 862 901 4.7E-6 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 481 520 1.1 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 647 686 0.0035 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 438 478 130.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 812 859 1.1 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 355 394 190.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 904 944 8.3E-4 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 772 809 0.1 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 689 731 0.045 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 SMART SM00320 397 435 9.9 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Gene3D G3DSA:2.130.10.10 316 501 3.2E-31 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Gene3D G3DSA:2.130.10.10 769 975 8.2E-39 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 PANTHER PTHR22847:SF50 762 995 2.0E-98 T 23-04-2016 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 PANTHER PTHR22847:SF50 260 719 2.0E-98 T 23-04-2016 NIAKO_RS08945 081cdfb2753e64687471ef18fe3bcf11 1014 Gene3D G3DSA:3.40.50.10140 16 97 3.4E-10 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS05820 8db84e8ecacb87958104d5301451f0ad 212 SUPERFAMILY SSF75217 5 188 4.51E-46 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS05820 8db84e8ecacb87958104d5301451f0ad 212 Gene3D G3DSA:3.40.1280.10 3 189 1.2E-51 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS05820 8db84e8ecacb87958104d5301451f0ad 212 PANTHER PTHR12029 1 188 1.8E-53 T 23-04-2016 NIAKO_RS05820 8db84e8ecacb87958104d5301451f0ad 212 Pfam PF00588 SpoU rRNA Methylase family 20 161 3.3E-33 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 46 4.4E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 4.4E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 63 76 4.4E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:1.10.1160.10 263 339 7.3E-35 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 48 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 32 555 4.2E-226 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:2.40.240.10 465 551 7.3E-34 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:3.40.50.620 214 262 1.2E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:3.40.50.620 31 99 1.2E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PANTHER PTHR11451:SF29 268 557 5.8E-219 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PANTHER PTHR11451:SF29 13 249 5.8E-219 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PANTHER PTHR11451 268 557 5.8E-219 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 PANTHER PTHR11451 13 249 5.8E-219 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 SUPERFAMILY SSF52374 31 347 3.47E-95 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 341 533 3.6E-56 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:3.90.800.10 103 211 4.2E-48 T 23-04-2016 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Gene3D G3DSA:2.40.240.10 349 464 3.5E-46 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 31 338 1.0E-107 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 50.382 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 NIAKO_RS04860 38ec38346e00c624a4e758c5aa39db9a 560 SUPERFAMILY SSF50715 341 551 4.08E-72 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 NIAKO_RS17745 7d150cefdbaa333ae8201c20ce5a2b5d 299 Gene3D G3DSA:2.115.10.20 56 253 1.1E-23 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17745 7d150cefdbaa333ae8201c20ce5a2b5d 299 Pfam PF04616 Glycosyl hydrolases family 43 58 240 9.2E-8 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17745 7d150cefdbaa333ae8201c20ce5a2b5d 299 SUPERFAMILY SSF75005 52 254 3.27E-26 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 Gene3D G3DSA:1.25.40.10 157 217 1.1E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 SMART SM00028 143 176 0.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 SMART SM00028 108 141 200.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 SMART SM00028 181 214 47.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 Pfam PF13181 Tetratricopeptide repeat 144 169 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 Pfam PF13181 Tetratricopeptide repeat 115 132 0.042 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 Pfam PF13174 Tetratricopeptide repeat 184 214 2.3E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 SUPERFAMILY SSF48452 94 225 7.97E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09985 f617bed2b4bc17327186d5a82b87e849 231 Gene3D G3DSA:1.25.40.10 94 156 5.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22845 d80466dd2bbe2d6391ee37b28ecec268 285 Gene3D G3DSA:3.40.50.1820 62 285 4.1E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22845 d80466dd2bbe2d6391ee37b28ecec268 285 PANTHER PTHR17630 33 285 2.8E-45 T 23-04-2016 NIAKO_RS22845 d80466dd2bbe2d6391ee37b28ecec268 285 PANTHER PTHR17630:SF32 33 285 2.8E-45 T 23-04-2016 NIAKO_RS22845 d80466dd2bbe2d6391ee37b28ecec268 285 SUPERFAMILY SSF53474 61 285 1.12E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22845 d80466dd2bbe2d6391ee37b28ecec268 285 Pfam PF01738 Dienelactone hydrolase family 74 283 3.2E-52 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 PANTHER PTHR35580 27 420 7.7E-24 T 23-04-2016 NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 PANTHER PTHR35580:SF1 27 420 7.7E-24 T 23-04-2016 NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 Gene3D G3DSA:2.120.10.30 22 138 6.0E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 Pfam PF06739 Beta-propeller repeat 61 95 6.9E-7 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 Pfam PF06739 Beta-propeller repeat 228 255 1.1E-5 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 463 534 8.6E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 SUPERFAMILY SSF101898 69 371 1.23E-15 T 23-04-2016 NIAKO_RS06760 6102704e477d4670a917e9a511148e45 546 Gene3D G3DSA:2.120.10.30 139 420 1.2E-13 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS25830 40efbf7c5c03a32171dc3b284632c4bf 261 PANTHER PTHR16255 11 252 1.4E-23 T 23-04-2016 NIAKO_RS25830 40efbf7c5c03a32171dc3b284632c4bf 261 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 46 213 9.7E-23 T 23-04-2016 IPR003734 Domain of unknown function DUF155 NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 Pfam PF00106 short chain dehydrogenase 8 192 5.3E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PANTHER PTHR24322:SF414 153 186 2.6E-59 T 23-04-2016 NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PANTHER PTHR24322:SF414 12 137 2.6E-59 T 23-04-2016 NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 SUPERFAMILY SSF51735 4 242 2.54E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PANTHER PTHR24322 153 186 2.6E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PANTHER PTHR24322 12 137 2.6E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 Gene3D G3DSA:3.40.50.720 7 246 2.0E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0085 T 23-04-2016 NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08500 f1a0f47f58fcb7531cb25a907705dd59 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Pfam PF04679 ATP dependent DNA ligase C terminal region 456 548 4.3E-26 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Gene3D G3DSA:3.30.470.30 282 388 7.0E-25 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 PANTHER PTHR10459:SF61 248 687 4.4E-71 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Pfam PF01068 ATP dependent DNA ligase domain 259 437 1.2E-34 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 642 888 2.3E-69 T 23-04-2016 IPR014145 DNA ligase D, polymerase domain NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 259 554 3.7E-96 T 23-04-2016 IPR014146 DNA ligase D, ligase domain NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 171 5.1E-65 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 413 437 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 PANTHER PTHR10459 248 687 4.4E-71 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 SUPERFAMILY SSF50249 440 558 6.43E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Gene3D G3DSA:3.30.1490.70 252 281 7.6E-20 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Gene3D G3DSA:3.30.1490.70 394 437 7.6E-20 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 SUPERFAMILY SSF56091 247 438 1.56E-43 T 23-04-2016 NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Gene3D G3DSA:2.40.50.140 440 555 1.8E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 Pfam PF13298 DNA polymerase Ligase (LigD) 39 153 9.0E-41 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NIAKO_RS07755 119a5a16e8bffbacc15974bc5527b722 934 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 272 911 2.0E-168 T 23-04-2016 IPR014143 DNA ligase D NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 PANTHER PTHR24031 7 439 2.0E-128 T 23-04-2016 NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 PANTHER PTHR24031:SF276 7 439 2.0E-128 T 23-04-2016 NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 SMART SM00487 16 209 1.7E-35 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 Pfam PF00271 Helicase conserved C-terminal domain 216 323 8.7E-25 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 Pfam PF00270 DEAD/DEAH box helicase 22 177 2.5E-36 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 Gene3D G3DSA:3.40.50.300 206 337 2.7E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 Pfam PF03880 DbpA RNA binding domain 366 435 6.6E-22 T 23-04-2016 IPR005580 DbpA, RNA-binding domain NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 SMART SM00490 243 324 2.4E-25 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 SUPERFAMILY SSF52540 66 337 9.25E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06980 0db1eea1fc1119018477e18c68e51411 439 Gene3D G3DSA:3.40.50.300 8 194 4.9E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 Gene3D G3DSA:3.40.720.10 280 431 9.4E-124 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 Gene3D G3DSA:3.40.720.10 31 233 9.4E-124 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 ProSitePatterns PS00149 Sulfatases signature 2. 122 132 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 ProSitePatterns PS00523 Sulfatases signature 1. 80 92 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 Pfam PF16347 Domain of unknown function (DUF4976) 413 513 1.6E-40 T 23-04-2016 IPR032506 Domain of unknown function DUF4976 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 Pfam PF00884 Sulfatase 34 410 3.2E-67 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 PANTHER PTHR10342:SF237 8 229 1.8E-178 T 23-04-2016 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 PANTHER PTHR10342:SF237 302 515 1.8E-178 T 23-04-2016 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 PANTHER PTHR10342 8 229 1.8E-178 T 23-04-2016 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 PANTHER PTHR10342 302 515 1.8E-178 T 23-04-2016 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 SUPERFAMILY SSF53649 311 513 1.96E-131 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 SUPERFAMILY SSF53649 32 262 1.96E-131 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18480 3e2983948cc59bf15134fb6bfb218ff0 520 Gene3D G3DSA:3.30.1120.10 443 516 3.0E-17 T 23-04-2016 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 3.1E-28 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 327 1.7E-32 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 PANTHER PTHR34069 3 329 1.5E-124 T 23-04-2016 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 327 64.318 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 327 3.6E-106 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 Gene3D G3DSA:3.40.47.10 5 164 4.0E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 PANTHER PTHR34069:SF2 3 329 1.5E-124 T 23-04-2016 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 Gene3D G3DSA:3.40.47.10 165 327 1.8E-49 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS24985 3a5fd2cf92f8a22bb35177e0f53cc2bf 329 SUPERFAMILY SSF53901 9 327 8.65E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 SUPERFAMILY SSF54427 167 274 6.88E-9 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 156 1.5E-19 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 Pfam PF04542 Sigma-70 region 2 8 71 2.2E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 Gene3D G3DSA:3.10.450.50 165 284 1.5E-5 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 Gene3D G3DSA:1.10.10.10 105 155 2.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 Pfam PF08281 Sigma-70, region 4 107 155 3.3E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 Gene3D G3DSA:1.10.1740.10 7 94 4.5E-13 T 23-04-2016 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 PANTHER PTHR30173:SF11 5 284 1.0E-66 T 23-04-2016 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 SUPERFAMILY SSF88659 89 155 2.62E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 PANTHER PTHR30173 5 284 1.0E-66 T 23-04-2016 NIAKO_RS09490 b8a072adcd8d9d56655789a7852a551b 291 SUPERFAMILY SSF88946 6 85 9.42E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 Pfam PF03466 LysR substrate binding domain 87 291 5.9E-38 T 23-04-2016 IPR005119 LysR, substrate-binding NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 SUPERFAMILY SSF46785 5 111 1.43E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 Gene3D G3DSA:3.40.190.10 88 231 7.9E-33 T 23-04-2016 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 Gene3D G3DSA:1.10.10.10 5 87 7.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 PANTHER PTHR30126 1 291 2.3E-82 T 23-04-2016 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 PANTHER PTHR30126:SF11 1 291 2.3E-82 T 23-04-2016 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.8E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS13020 df3c2c2a698f9e7980649c8f40f5f114 298 SUPERFAMILY SSF53850 89 291 1.59E-34 T 23-04-2016 NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 Gene3D G3DSA:3.90.1150.10 285 399 1.8E-15 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 248 257 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 PANTHER PTHR13693 43 397 2.5E-111 T 23-04-2016 NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 SUPERFAMILY SSF53383 5 402 1.01E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 Gene3D G3DSA:3.40.640.10 63 284 3.4E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS22250 22ece6647ba2a136677ff62943cd8e7d 418 Pfam PF00155 Aminotransferase class I and II 45 394 4.8E-37 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS34415 11df86b45959c42835599657c5c24f64 268 Pfam PF05235 CHAD domain 10 221 4.3E-23 T 23-04-2016 IPR007899 CHAD domain NIAKO_RS34415 11df86b45959c42835599657c5c24f64 268 SMART SM00880 9 256 3.3E-4 T 23-04-2016 IPR007899 CHAD domain NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 1.5E-80 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.595 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 Gene3D G3DSA:3.40.1180.10 3 248 2.6E-99 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 SUPERFAMILY SSF64005 10 236 5.23E-87 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 240 2.9E-87 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS32440 42bb78d336fec1c5879d194220eb4f3d 253 PANTHER PTHR10291 4 253 2.1E-121 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 PANTHER PTHR10030 224 475 1.0E-67 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 PANTHER PTHR10030 60 203 1.0E-67 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 PRINTS PR00741 Glycosyl hydrolase family 29 signature 338 359 9.5E-11 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 PRINTS PR00741 Glycosyl hydrolase family 29 signature 371 393 9.5E-11 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 PRINTS PR00741 Glycosyl hydrolase family 29 signature 133 149 9.5E-11 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 Gene3D G3DSA:2.60.40.1180 404 473 2.0E-6 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 SMART SM00812 50 428 1.6E-112 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 Pfam PF01120 Alpha-L-fucosidase 47 385 4.6E-85 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 Gene3D G3DSA:3.20.20.80 52 388 5.9E-96 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS26395 93e8f950a8923c7549eb6c330b95673c 620 SUPERFAMILY SSF51445 55 388 3.08E-87 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 41 1094 5.4E-201 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Gene3D G3DSA:2.60.40.1120 41 120 9.2E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532:SF57 565 852 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532:SF57 869 1092 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532:SF57 359 478 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532:SF57 19 283 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532 565 852 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532 869 1092 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532 359 478 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 PANTHER PTHR11532 19 283 1.1E-171 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 1.0E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF56935 496 844 3.11E-68 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF56935 118 262 3.11E-68 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF56935 933 978 3.11E-68 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF56935 1015 1094 3.11E-68 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF56935 370 458 3.11E-68 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Gene3D G3DSA:2.40.170.20 942 1094 3.8E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Gene3D G3DSA:2.40.170.20 241 261 3.8E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Gene3D G3DSA:2.40.170.20 379 862 3.8E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 SUPERFAMILY SSF49464 41 133 1.05E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Gene3D G3DSA:2.170.130.10 121 240 8.0E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Pfam PF13715 CarboxypepD_reg-like domain 41 122 2.5E-15 T 23-04-2016 NIAKO_RS15850 8368524c298ebf687be34ab849a66731 1094 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 238 1.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS37425 f1f9ce06a69a53f747ea94842a9a0c6d 211 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 129 206 8.0E-15 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS37425 f1f9ce06a69a53f747ea94842a9a0c6d 211 PANTHER PTHR23309 93 205 5.5E-20 T 23-04-2016 NIAKO_RS37425 f1f9ce06a69a53f747ea94842a9a0c6d 211 Gene3D G3DSA:1.10.1040.10 129 201 3.9E-16 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS37425 f1f9ce06a69a53f747ea94842a9a0c6d 211 SUPERFAMILY SSF48179 129 210 5.78E-15 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS37425 f1f9ce06a69a53f747ea94842a9a0c6d 211 PANTHER PTHR23309:SF12 93 205 5.5E-20 T 23-04-2016 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PIRSF PIRSF001112 1 403 1.9E-146 T 23-04-2016 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 Gene3D G3DSA:3.40.50.1820 10 402 3.1E-120 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 Pfam PF06441 Epoxide hydrolase N terminus 19 122 2.6E-35 T 23-04-2016 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PRINTS PR00412 Epoxide hydrolase signature 143 158 2.7E-10 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PRINTS PR00412 Epoxide hydrolase signature 114 132 2.7E-10 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PRINTS PR00412 Epoxide hydrolase signature 376 398 2.7E-10 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PRINTS PR00412 Epoxide hydrolase signature 188 201 2.7E-10 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PANTHER PTHR21661:SF35 1 403 1.5E-112 T 23-04-2016 NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 SUPERFAMILY SSF53474 11 401 5.07E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10540 fb662bff5b5828b28735bbb8af5dbaed 403 PANTHER PTHR21661 1 403 1.5E-112 T 23-04-2016 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 1.3E-24 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 PANTHER PTHR22604 2 335 7.7E-66 T 23-04-2016 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 Gene3D G3DSA:3.30.360.10 146 337 7.5E-30 T 23-04-2016 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 252 1.4E-9 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 Gene3D G3DSA:3.40.50.720 4 145 5.4E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 PANTHER PTHR22604:SF120 2 335 7.7E-66 T 23-04-2016 NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 SUPERFAMILY SSF51735 5 171 2.59E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33220 426f204e1a47c4cbaed2ff732135d2a9 342 SUPERFAMILY SSF55347 130 289 7.19E-33 T 23-04-2016 NIAKO_RS35910 328b86a053f67234183558e99c52557d 319 Gene3D G3DSA:3.20.20.100 1 316 1.6E-85 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS35910 328b86a053f67234183558e99c52557d 319 SUPERFAMILY SSF51430 1 316 9.82E-87 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS35910 328b86a053f67234183558e99c52557d 319 PANTHER PTHR11732:SF191 1 319 3.3E-174 T 23-04-2016 NIAKO_RS35910 328b86a053f67234183558e99c52557d 319 Pfam PF00248 Aldo/keto reductase family 16 316 1.7E-69 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS35910 328b86a053f67234183558e99c52557d 319 PANTHER PTHR11732 1 319 3.3E-174 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 ProSitePatterns PS00163 Fumarate lyases signature. 290 299 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PRINTS PR00149 Fumarate lyase superfamily signature 112 130 6.4E-16 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PRINTS PR00149 Fumarate lyase superfamily signature 247 274 6.4E-16 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PRINTS PR00149 Fumarate lyase superfamily signature 290 306 6.4E-16 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PRINTS PR00149 Fumarate lyase superfamily signature 158 176 6.4E-16 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PANTHER PTHR11444:SF17 5 443 5.8E-186 T 23-04-2016 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 Gene3D G3DSA:1.20.200.10 115 385 5.1E-77 T 23-04-2016 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 Gene3D G3DSA:1.10.40.30 386 442 3.9E-27 T 23-04-2016 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 PANTHER PTHR11444 5 443 5.8E-186 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 SUPERFAMILY SSF48557 10 444 1.29E-90 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 Gene3D G3DSA:1.10.275.10 1 114 1.3E-40 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 13 445 5.7E-114 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 Pfam PF00206 Lyase 55 308 4.3E-51 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal NIAKO_RS14855 cc914d454454cc07282d339cf773e89c 448 Pfam PF08328 Adenylosuccinate lyase C-terminal 327 442 2.3E-48 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 367 397 5.6E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Pfam PF13715 CarboxypepD_reg-like domain 169 252 4.1E-14 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 SUPERFAMILY SSF49464 169 234 5.49E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Pfam PF07715 TonB-dependent Receptor Plug Domain 260 391 1.7E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 169 1145 1.7E-216 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.40.170.20 476 918 2.5E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.40.170.20 969 1003 2.5E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.40.170.20 1044 1145 2.5E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.40.170.20 395 418 2.5E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 SUPERFAMILY SSF56935 1050 1145 2.47E-87 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 SUPERFAMILY SSF56935 971 1015 2.47E-87 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 SUPERFAMILY SSF56935 248 415 2.47E-87 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 SUPERFAMILY SSF56935 467 918 2.47E-87 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532 169 334 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532 566 611 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532 358 530 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532 651 1143 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.170.130.10 259 394 1.8E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532:SF57 169 334 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532:SF57 566 611 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532:SF57 358 530 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 PANTHER PTHR11532:SF57 651 1143 7.3E-186 T 23-04-2016 NIAKO_RS16865 09a43eaa885f8ec3a8cf7a721d3fcebb 1145 Gene3D G3DSA:2.60.40.1120 169 258 4.5E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 220 250 3.4E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Pfam PF13715 CarboxypepD_reg-like domain 45 127 2.4E-15 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF49464 43 125 2.22E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF56935 451 795 3.75E-77 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF56935 331 419 3.75E-77 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF56935 873 917 3.75E-77 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF56935 954 993 3.75E-77 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 SUPERFAMILY SSF56935 121 268 3.75E-77 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 44 1042 1.8E-227 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.170.130.10 130 245 3.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532 413 446 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532 523 1040 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532 21 385 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 244 1.5E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532:SF57 413 446 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532:SF57 523 1040 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 PANTHER PTHR11532:SF57 21 385 1.5E-205 T 23-04-2016 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.60.40.1120 44 129 1.2E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.40.170.20 246 264 5.4E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.40.170.20 340 816 5.4E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.40.170.20 964 999 5.4E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26505 99858a7e27a80e8de19d4ee5ca955b86 1042 Gene3D G3DSA:2.40.170.20 882 926 5.4E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 Pfam PF00155 Aminotransferase class I and II 45 384 7.2E-62 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 SUPERFAMILY SSF53383 8 388 3.09E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 PANTHER PTHR13693 18 396 8.7E-160 T 23-04-2016 NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 Gene3D G3DSA:3.90.1150.10 278 387 1.2E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NIAKO_RS06360 6a891a59365715884fa5a549bf0ef16e 403 Gene3D G3DSA:3.40.640.10 62 277 4.5E-87 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS15230 6a91c5290648ee40248dd0ee86507670 391 PANTHER PTHR30528 3 391 2.7E-85 T 23-04-2016 NIAKO_RS15230 6a91c5290648ee40248dd0ee86507670 391 Pfam PF06224 Winged helix DNA-binding domain 38 371 1.5E-63 T 23-04-2016 IPR009351 Protein of unknown function DUF1006 NIAKO_RS26155 a4fbfbda96696a004377326a8e022d89 116 SUPERFAMILY SSF50022 7 115 2.23E-38 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS26155 a4fbfbda96696a004377326a8e022d89 116 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 112 5.0E-31 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NIAKO_RS26155 a4fbfbda96696a004377326a8e022d89 116 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 112 3.7E-27 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NIAKO_RS26155 a4fbfbda96696a004377326a8e022d89 116 PANTHER PTHR21496 7 114 9.4E-15 T 23-04-2016 NIAKO_RS26155 a4fbfbda96696a004377326a8e022d89 116 Gene3D G3DSA:2.102.10.10 8 115 2.3E-38 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Gene3D G3DSA:3.30.930.10 5 295 1.9E-105 T 23-04-2016 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 114 283 7.0E-18 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 SUPERFAMILY SSF64586 420 492 7.26E-22 T 23-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 SMART SM00946 425 492 4.5E-33 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 PANTHER PTHR11451:SF6 1 96 2.6E-225 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 PANTHER PTHR11451:SF6 112 466 2.6E-225 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 SUPERFAMILY SSF55681 11 289 4.98E-73 T 23-04-2016 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 SUPERFAMILY SSF52954 291 418 2.94E-35 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Gene3D G3DSA:3.40.50.800 296 415 1.3E-43 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Hamap MF_01571 Proline--tRNA ligase [proS]. 5 492 43.46 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 425 492 3.0E-24 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 PANTHER PTHR11451 1 96 2.6E-225 T 23-04-2016 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 PANTHER PTHR11451 112 466 2.6E-225 T 23-04-2016 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 6 492 1.2E-168 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Pfam PF03129 Anticodon binding domain 302 397 9.7E-21 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS09845 d75cd888649c1eed6f866282ed62d85a 492 Gene3D G3DSA:3.30.110.30 419 491 3.6E-29 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NIAKO_RS14215 d2e98cc50468c134edfd030682d178ca 846 SUPERFAMILY SSF50965 218 452 1.09E-13 T 23-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller NIAKO_RS14215 d2e98cc50468c134edfd030682d178ca 846 Gene3D G3DSA:2.120.10.80 299 436 2.2E-10 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS14215 d2e98cc50468c134edfd030682d178ca 846 Pfam PF13964 Kelch motif 326 365 1.0E-5 T 23-04-2016 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 PIRSF PIRSF018788 1 457 3.8E-236 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 Gene3D G3DSA:3.20.20.70 143 451 5.3E-163 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 PANTHER PTHR39329:SF1 1 459 7.7E-280 T 23-04-2016 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 Gene3D G3DSA:1.10.220.70 55 141 1.7E-39 T 23-04-2016 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 2.0E-223 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 PANTHER PTHR39329 1 459 7.7E-280 T 23-04-2016 NIAKO_RS01930 fa067e93cc5dae3a6ed8780f28361e7d 459 Gene3D G3DSA:2.30.170.30 1 54 2.4E-24 T 23-04-2016 NIAKO_RS28620 e23ebfdcaea73660e186667300d8dfcc 410 Pfam PF06245 Protein of unknown function (DUF1015) 4 406 5.7E-134 T 23-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 NIAKO_RS28620 e23ebfdcaea73660e186667300d8dfcc 410 PIRSF PIRSF033563 1 410 7.2E-142 T 23-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 NIAKO_RS28620 e23ebfdcaea73660e186667300d8dfcc 410 PANTHER PTHR36454 1 410 3.1E-138 T 23-04-2016 NIAKO_RS28620 e23ebfdcaea73660e186667300d8dfcc 410 PANTHER PTHR36454:SF1 1 410 3.1E-138 T 23-04-2016 NIAKO_RS14770 1a8e85f07bacc5240266328dcaefe6d3 927 SUPERFAMILY SSF69304 290 499 5.75E-13 T 23-04-2016 NIAKO_RS14770 1a8e85f07bacc5240266328dcaefe6d3 927 Gene3D G3DSA:2.130.10.10 297 536 7.4E-17 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SMART SM00257 220 266 15.0 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SMART SM00257 365 408 1.4E-11 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SMART SM00257 276 320 0.0066 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 Pfam PF01476 LysM domain 277 318 4.0E-6 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 Pfam PF01476 LysM domain 366 407 6.8E-12 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SUPERFAMILY SSF54106 364 408 2.09E-10 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 Gene3D G3DSA:3.10.350.10 276 319 8.7E-6 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SMART SM00047 17 167 2.0E-20 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 PANTHER PTHR33308 8 166 1.5E-23 T 23-04-2016 NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 SUPERFAMILY SSF54106 276 319 1.83E-5 T 23-04-2016 IPR018392 LysM domain NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 35 163 1.7E-19 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 PANTHER PTHR33308:SF3 8 166 1.5E-23 T 23-04-2016 NIAKO_RS37240 230c3b1b774da2b3a28cac8d9381ff4a 410 Gene3D G3DSA:3.10.350.10 364 409 4.9E-16 T 23-04-2016 IPR018392 LysM domain NIAKO_RS02570 ee1a5e8f84753c749c350e70e2d7b285 620 Gene3D G3DSA:2.160.20.10 2 377 4.8E-15 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS02570 ee1a5e8f84753c749c350e70e2d7b285 620 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 543 611 3.5E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS02570 ee1a5e8f84753c749c350e70e2d7b285 620 SUPERFAMILY SSF51126 12 344 1.3E-21 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS02570 ee1a5e8f84753c749c350e70e2d7b285 620 SUPERFAMILY SSF49785 457 524 4.89E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS02570 ee1a5e8f84753c749c350e70e2d7b285 620 Gene3D G3DSA:2.60.120.260 460 522 5.7E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 SMART SM00342 200 283 6.8E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 SUPERFAMILY SSF46689 236 287 5.68E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 Gene3D G3DSA:2.60.120.10 28 74 1.2E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 Pfam PF12833 Helix-turn-helix domain 206 284 1.2E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 Gene3D G3DSA:1.10.10.60 237 286 1.0E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 PANTHER PTHR11019:SF65 173 290 6.2E-32 T 23-04-2016 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 PANTHER PTHR11019:SF65 29 135 6.2E-32 T 23-04-2016 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 SUPERFAMILY SSF46689 183 234 3.11E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 Gene3D G3DSA:1.10.10.60 179 236 3.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 SUPERFAMILY SSF51182 18 77 2.13E-8 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 PANTHER PTHR11019 173 290 6.2E-32 T 23-04-2016 NIAKO_RS26370 5c42f3e543102d5dab006b2e8afc237e 290 PANTHER PTHR11019 29 135 6.2E-32 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 SUPERFAMILY SSF52540 1 167 9.09E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PANTHER PTHR21087:SF0 1 151 3.0E-47 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 Pfam PF01202 Shikimate kinase 9 166 1.3E-40 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 Gene3D G3DSA:3.40.50.300 1 166 2.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PANTHER PTHR21087 1 151 3.0E-47 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 21.509 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PRINTS PR01100 Shikimate kinase family signature 74 83 1.0E-17 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PRINTS PR01100 Shikimate kinase family signature 95 112 1.0E-17 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PRINTS PR01100 Shikimate kinase family signature 55 63 1.0E-17 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PRINTS PR01100 Shikimate kinase family signature 27 40 1.0E-17 T 23-04-2016 NIAKO_RS22290 b9c92b23acc1458915acb16b4045870d 169 PRINTS PR01100 Shikimate kinase family signature 3 18 1.0E-17 T 23-04-2016 NIAKO_RS34085 78674872a80a44167634fcbd696d488e 310 PANTHER PTHR12110 37 310 6.7E-36 T 23-04-2016 NIAKO_RS34085 78674872a80a44167634fcbd696d488e 310 Gene3D G3DSA:3.20.20.150 45 303 2.8E-58 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS34085 78674872a80a44167634fcbd696d488e 310 Pfam PF01261 Xylose isomerase-like TIM barrel 66 262 4.3E-22 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS34085 78674872a80a44167634fcbd696d488e 310 SUPERFAMILY SSF51658 46 290 6.81E-55 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS34085 78674872a80a44167634fcbd696d488e 310 PIRSF PIRSF006241 42 307 4.1E-70 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 NIAKO_RS19290 34da8a727958a661aab873d2799f8ea4 300 Pfam PF15890 Putative zinc-binding metallo-peptidase 36 285 3.2E-88 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS19290 34da8a727958a661aab873d2799f8ea4 300 SUPERFAMILY SSF55486 159 233 2.54E-7 T 23-04-2016 NIAKO_RS19290 34da8a727958a661aab873d2799f8ea4 300 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 30 295 6.0E-95 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 Pfam PF03441 FAD binding domain of DNA photolyase 254 429 4.1E-72 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 324 343 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 Gene3D G3DSA:1.10.579.10 263 431 1.5E-69 T 23-04-2016 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 304 316 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 SUPERFAMILY SSF52425 2 176 1.83E-58 T 23-04-2016 IPR006050 DNA photolyase, N-terminal NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PANTHER PTHR11455:SF18 6 435 1.7E-176 T 23-04-2016 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 Gene3D G3DSA:1.25.40.80 146 262 8.5E-29 T 23-04-2016 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 Pfam PF00875 DNA photolyase 6 162 5.5E-50 T 23-04-2016 IPR006050 DNA photolyase, N-terminal NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 Gene3D G3DSA:3.40.50.620 3 145 7.1E-53 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 SUPERFAMILY SSF48173 211 432 2.09E-88 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PRINTS PR00147 DNA photolyase signature 142 158 5.9E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PRINTS PR00147 DNA photolyase signature 324 342 5.9E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PRINTS PR00147 DNA photolyase signature 363 377 5.9E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PRINTS PR00147 DNA photolyase signature 304 320 5.9E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 NIAKO_RS24925 b5a086d507e3eaf1cc6b1acbf7190ec0 435 PANTHER PTHR11455 6 435 1.7E-176 T 23-04-2016 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Gene3D G3DSA:3.30.365.10 375 551 7.1E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 44 171 4.1E-25 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 586 670 6.9E-14 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 319 553 1.2E-21 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 SMART SM01008 203 284 5.2E-4 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 PANTHER PTHR11908:SF22 156 458 6.8E-136 T 23-04-2016 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 PANTHER PTHR11908:SF22 477 712 6.8E-136 T 23-04-2016 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 SUPERFAMILY SSF56003 311 716 5.93E-98 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 SUPERFAMILY SSF56003 41 236 3.53E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Gene3D G3DSA:3.90.1170.50 184 264 2.0E-16 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Gene3D G3DSA:3.30.365.10 552 716 1.9E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 Gene3D G3DSA:3.30.365.10 44 183 1.0E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 PANTHER PTHR11908 156 458 6.8E-136 T 23-04-2016 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 PANTHER PTHR11908 477 712 6.8E-136 T 23-04-2016 NIAKO_RS28895 53093d5138ea0049fc5421ecc552c304 723 PIRSF PIRSF036389 1 722 6.0E-187 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 SUPERFAMILY SSF159127 1 78 1.83E-21 T 23-04-2016 NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 1.1E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 1.1E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 23 39 1.1E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PANTHER PTHR35177:SF2 1 79 2.9E-20 T 23-04-2016 NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 Pfam PF01455 HupF/HypC family 1 70 1.5E-23 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 PANTHER PTHR35177 1 79 2.9E-20 T 23-04-2016 NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 23-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site NIAKO_RS06235 f406f42d405800cc29b267738c9b17ee 81 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 77 2.0E-22 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC NIAKO_RS12440 a0ac2f51c0ac1c9f0a72a280faf6e27d 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 2.8E-16 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS12440 a0ac2f51c0ac1c9f0a72a280faf6e27d 137 SUPERFAMILY SSF54593 3 130 2.42E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS12440 a0ac2f51c0ac1c9f0a72a280faf6e27d 137 PANTHER PTHR36437:SF2 1 130 2.9E-59 T 23-04-2016 NIAKO_RS12440 a0ac2f51c0ac1c9f0a72a280faf6e27d 137 PANTHER PTHR36437 1 130 2.9E-59 T 23-04-2016 NIAKO_RS12440 a0ac2f51c0ac1c9f0a72a280faf6e27d 137 Gene3D G3DSA:3.10.180.10 1 130 2.2E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS09395 5a871c6c2cc76c891cc92bc6c1bca0c4 244 PANTHER PTHR34216 11 242 4.0E-30 T 23-04-2016 NIAKO_RS09395 5a871c6c2cc76c891cc92bc6c1bca0c4 244 Pfam PF01522 Polysaccharide deacetylase 64 180 4.2E-21 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS09395 5a871c6c2cc76c891cc92bc6c1bca0c4 244 Gene3D G3DSA:3.20.20.370 38 180 7.5E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS09395 5a871c6c2cc76c891cc92bc6c1bca0c4 244 SUPERFAMILY SSF88713 27 180 2.04E-29 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS09395 5a871c6c2cc76c891cc92bc6c1bca0c4 244 PANTHER PTHR34216:SF3 11 242 4.0E-30 T 23-04-2016 NIAKO_RS20950 a26365a95b447f92196ddbadd26bb97e 209 PANTHER PTHR30212:SF3 5 169 1.9E-19 T 23-04-2016 NIAKO_RS20950 a26365a95b447f92196ddbadd26bb97e 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 130 1.2E-9 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS20950 a26365a95b447f92196ddbadd26bb97e 209 PANTHER PTHR30212 5 169 1.9E-19 T 23-04-2016 NIAKO_RS20950 a26365a95b447f92196ddbadd26bb97e 209 SUPERFAMILY SSF50475 39 173 8.89E-11 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS20950 a26365a95b447f92196ddbadd26bb97e 209 Gene3D G3DSA:2.30.110.10 35 162 1.8E-20 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 Gene3D G3DSA:1.10.340.30 23 122 3.7E-32 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 165 1.7E-19 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 SMART SM00478 39 187 2.1E-44 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 PIRSF PIRSF001435 1 214 2.5E-43 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 Hamap MF_00942 Endonuclease III [nth]. 1 211 36.042 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 TIGRFAM TIGR01083 nth: endonuclease III 5 196 5.6E-69 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 Gene3D G3DSA:1.10.1670.10 123 211 6.1E-33 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 Pfam PF00633 Helix-hairpin-helix motif 100 128 5.3E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 ProSitePatterns PS01155 Endonuclease III family signature. 103 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 SMART SM00525 188 208 7.5E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 SUPERFAMILY SSF48150 2 211 1.16E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS32720 d56c49633ea9f9886498750abc4d25ec 216 PANTHER PTHR10359 19 216 1.1E-73 T 23-04-2016 NIAKO_RS26785 8c9ddfab8b698b7eb9f409a877d2a5f0 262 PANTHER PTHR36057 49 221 9.5E-38 T 23-04-2016 NIAKO_RS26785 8c9ddfab8b698b7eb9f409a877d2a5f0 262 PANTHER PTHR36057:SF1 49 221 9.5E-38 T 23-04-2016 NIAKO_RS26785 8c9ddfab8b698b7eb9f409a877d2a5f0 262 Pfam PF06764 Protein of unknown function (DUF1223) 52 248 4.0E-60 T 23-04-2016 IPR010634 Protein of unknown function DUF1223 NIAKO_RS26785 8c9ddfab8b698b7eb9f409a877d2a5f0 262 SUPERFAMILY SSF52833 46 260 5.27E-57 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.5E-16 T 23-04-2016 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 8.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 8.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 8.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 SUPERFAMILY SSF46785 4 62 1.01E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 Gene3D G3DSA:3.30.70.920 58 152 6.2E-26 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 Gene3D G3DSA:1.10.10.10 4 55 2.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 PANTHER PTHR30154 1 153 1.6E-40 T 23-04-2016 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 Pfam PF01037 Lrp/AsnC ligand binding domain 85 144 2.5E-19 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 SMART SM00344 5 113 5.9E-31 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 PANTHER PTHR30154:SF2 1 153 1.6E-40 T 23-04-2016 NIAKO_RS31370 61c92d881ced4c291c33a33cd8d1ebb6 156 SUPERFAMILY SSF54909 67 148 4.29E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS25765 c099a853f34470ccf0628f3cd0f59f66 396 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 38 372 3.8E-82 T 23-04-2016 NIAKO_RS25765 c099a853f34470ccf0628f3cd0f59f66 396 SUPERFAMILY SSF48208 10 389 3.29E-104 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS25765 c099a853f34470ccf0628f3cd0f59f66 396 PANTHER PTHR15108 2 389 1.5E-151 T 23-04-2016 NIAKO_RS25765 c099a853f34470ccf0628f3cd0f59f66 396 Gene3D G3DSA:1.50.10.10 14 390 1.7E-136 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 Pfam PF13715 CarboxypepD_reg-like domain 171 256 2.8E-15 T 23-04-2016 NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 303 377 3.2E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 Gene3D G3DSA:2.60.40.1120 170 237 3.0E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 PANTHER PTHR11532:SF57 169 283 4.4E-14 T 23-04-2016 NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 PANTHER PTHR11532 169 283 4.4E-14 T 23-04-2016 NIAKO_RS02035 de889a95f3defc5c2436a4b777a6d5a0 385 SUPERFAMILY SSF49464 169 251 1.83E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 PANTHER PTHR21240:SF12 71 364 8.1E-50 T 23-04-2016 NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 PANTHER PTHR21240 71 364 8.1E-50 T 23-04-2016 NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 Pfam PF04909 Amidohydrolase 120 352 2.2E-27 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 SUPERFAMILY SSF51556 48 352 2.27E-34 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 Gene3D G3DSA:3.20.20.140 225 354 3.5E-36 T 23-04-2016 NIAKO_RS30980 bb32a0b01f6068cc4ab36f376545544f 364 Gene3D G3DSA:3.20.20.140 49 193 3.5E-36 T 23-04-2016 NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 PANTHER PTHR22925:SF37 14 306 2.1E-60 T 23-04-2016 NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 SUPERFAMILY SSF75005 21 313 1.7E-64 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 Pfam PF03422 Carbohydrate binding module (family 6) 350 445 1.1E-11 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 PANTHER PTHR22925 14 306 2.1E-60 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 Gene3D G3DSA:2.60.120.260 336 445 2.4E-13 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 SUPERFAMILY SSF49785 353 444 8.38E-9 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 Pfam PF04616 Glycosyl hydrolases family 43 21 303 8.1E-48 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS12025 c036656d8014bbf0eea889ae870a4681 445 Gene3D G3DSA:2.115.10.20 11 303 9.5E-74 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 463 649 2.0E-46 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 SUPERFAMILY SSF51445 195 555 8.15E-71 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 SUPERFAMILY SSF51011 554 656 2.88E-8 T 23-04-2016 NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 Gene3D G3DSA:3.20.20.80 374 485 2.6E-4 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 PANTHER PTHR31776 5 658 1.5E-220 T 23-04-2016 NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 PANTHER PTHR31776:SF0 5 658 1.5E-220 T 23-04-2016 NIAKO_RS03545 aa60eadde96d0286c1aad1540c25b2c1 658 SMART SM00813 463 649 3.0E-52 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 Gene3D G3DSA:2.60.40.10 791 900 1.3E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 Gene3D G3DSA:2.160.20.10 9 356 1.4E-49 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 PANTHER PTHR31321:SF1 1007 1404 1.3E-78 T 23-04-2016 NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 Pfam PF01095 Pectinesterase 1029 1341 8.0E-50 T 23-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 Gene3D G3DSA:2.160.20.10 1028 1346 2.8E-87 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 PANTHER PTHR31321 1007 1404 1.3E-78 T 23-04-2016 NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 SUPERFAMILY SSF51126 1025 1345 5.62E-58 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 2620 2693 8.0E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS26080 26ddae2bcdf9cd5691124fd27d4b54d9 2693 SUPERFAMILY SSF51126 9 345 1.77E-44 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:2.40.40.20 730 888 1.6E-33 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 PANTHER PTHR11615:SF112 210 888 1.4E-195 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 PANTHER PTHR11615:SF112 3 51 1.4E-195 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 SUPERFAMILY SSF50692 739 887 8.14E-29 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 217 235 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.30.70.20 191 221 3.1E-5 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Pfam PF01568 Molydopterin dinucleotide binding domain 777 881 3.5E-19 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.30.70.20 126 190 8.8E-15 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 SMART SM00926 212 266 3.6E-21 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.40.228.10 343 522 4.8E-65 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 76 1.6E-10 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 PIRSF PIRSF036643 1 888 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Pfam PF13187 4Fe-4S dicluster domain 141 200 1.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Pfam PF00384 Molybdopterin oxidoreductase 269 689 7.9E-87 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 SUPERFAMILY SSF54862 75 204 6.7E-25 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 SUPERFAMILY SSF54292 3 74 1.35E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:2.20.25.90 222 267 5.3E-23 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 SUPERFAMILY SSF53706 189 760 2.49E-196 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.40.50.740 269 341 7.4E-86 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.40.50.740 523 729 7.4E-86 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Gene3D G3DSA:3.10.20.30 6 60 2.8E-5 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 218 885 1.9E-241 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 212 265 3.0E-20 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 PANTHER PTHR11615 3 51 1.4E-195 T 23-04-2016 NIAKO_RS11385 9c31bad0bfe2b2c7170e4dca16bd74c3 888 PANTHER PTHR11615 210 888 1.4E-195 T 23-04-2016 NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 SMART SM00418 25 104 3.4E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 Gene3D G3DSA:1.10.10.10 19 104 1.1E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 1.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 42 1.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 Pfam PF12840 Helix-turn-helix domain 24 84 1.8E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 SUPERFAMILY SSF46785 17 104 7.57E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32840 094e9bf55dfc25f0c3e1815bf3d0f9a6 107 PANTHER PTHR33154 19 107 1.3E-20 T 23-04-2016 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49303 861 971 3.09E-29 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49785 708 837 1.24E-26 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Gene3D G3DSA:2.60.120.260 20 199 1.1E-28 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Gene3D G3DSA:3.20.20.80 577 648 3.9E-37 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Gene3D G3DSA:3.20.20.80 327 536 3.9E-37 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 79 175 4.0E-8 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Pfam PF00703 Glycosyl hydrolases family 2 215 328 4.0E-17 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 PANTHER PTHR10066 1 787 1.7E-246 T 23-04-2016 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Gene3D G3DSA:2.60.40.320 200 326 7.8E-19 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49303 842 876 2.88E-24 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49303 645 712 2.88E-24 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF51445 325 645 5.38E-65 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 PANTHER PTHR10066:SF66 1 787 1.7E-246 T 23-04-2016 IPR028829 Exo-beta-D-glucosaminidase GO:0000272|GO:0005576|GO:0052761 KEGG: 00520+3.2.1.165 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49785 22 211 4.25E-33 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 SUPERFAMILY SSF49303 214 327 4.89E-22 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Gene3D G3DSA:2.60.120.260 712 837 5.8E-25 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06680 6e0c8456055804fbe00fe1a53a866099 972 Pfam PF00754 F5/8 type C domain 724 831 1.1E-24 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 122 1.5E-19 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 SUPERFAMILY SSF111331 1 297 1.08E-41 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 Gene3D G3DSA:3.40.50.10330 20 76 1.5E-4 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 SMART SM00046 3 128 3.0E-5 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 PANTHER PTHR12358:SF33 50 297 6.0E-26 T 23-04-2016 NIAKO_RS17235 cd26bf3bde28a2a56b023adb7d2e471d 298 PANTHER PTHR12358 50 297 6.0E-26 T 23-04-2016 NIAKO_RS19320 b1f70b3167f3c21d1a0a7adfe4a89c82 141 Pfam PF05099 Tellurite resistance protein TerB 16 126 9.8E-8 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal NIAKO_RS19320 b1f70b3167f3c21d1a0a7adfe4a89c82 141 SUPERFAMILY SSF158682 13 127 3.01E-10 T 23-04-2016 IPR029024 TerB-like NIAKO_RS19320 b1f70b3167f3c21d1a0a7adfe4a89c82 141 Gene3D G3DSA:1.10.3680.10 11 121 1.0E-10 T 23-04-2016 IPR029024 TerB-like NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 PANTHER PTHR32108:SF0 3 333 1.1E-115 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 SUPERFAMILY SSF56553 51 176 3.92E-35 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 255 314 2.3E-24 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 157 3.1E-20 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 PANTHER PTHR32108 3 333 1.1E-115 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Gene3D G3DSA:1.10.150.20 252 329 2.0E-31 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Gene3D G3DSA:2.170.120.12 51 175 2.6E-38 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 SUPERFAMILY SSF55257 177 231 1.12E-28 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 SUPERFAMILY SSF55257 7 51 1.12E-28 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 322 34.794 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 226 2.5E-23 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 264 323 6.0E-14 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 SUPERFAMILY SSF47789 256 327 7.72E-25 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 322 2.9E-113 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Gene3D G3DSA:3.30.1360.10 11 50 1.4E-8 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 Gene3D G3DSA:3.30.1360.10 178 230 1.4E-8 T 23-04-2016 NIAKO_RS21850 c635afe9504a81a14a908fd9d825646b 333 SMART SM00662 21 232 5.5E-76 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 125 201 4.4E-6 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Gene3D G3DSA:1.20.910.10 424 622 6.5E-10 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 359 2.2E-11 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 SUPERFAMILY SSF53901 257 370 1.85E-18 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Gene3D G3DSA:3.40.47.10 257 364 2.7E-22 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Gene3D G3DSA:3.40.47.10 195 216 2.7E-22 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 SUPERFAMILY SSF53901 6 203 3.46E-31 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 Gene3D G3DSA:3.40.47.10 4 194 8.8E-35 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 SUPERFAMILY SSF48613 406 621 2.97E-26 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 SUPERFAMILY SSF53901 188 216 1.85E-18 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 PANTHER PTHR34069 3 169 4.6E-28 T 23-04-2016 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 PANTHER PTHR34069 187 357 4.6E-28 T 23-04-2016 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 PANTHER PTHR34069:SF2 3 169 4.6E-28 T 23-04-2016 NIAKO_RS07100 428557868c4a695c73c35a48531f8d4d 625 PANTHER PTHR34069:SF2 187 357 4.6E-28 T 23-04-2016 NIAKO_RS10735 d2dd757bae259c2f2825e1d4e3b97800 143 SUPERFAMILY SSF49764 18 140 6.07E-31 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS10735 d2dd757bae259c2f2825e1d4e3b97800 143 Pfam PF00011 Hsp20/alpha crystallin family 42 143 2.9E-21 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS10735 d2dd757bae259c2f2825e1d4e3b97800 143 PANTHER PTHR11527 13 140 7.4E-26 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS10735 d2dd757bae259c2f2825e1d4e3b97800 143 Gene3D G3DSA:2.60.40.790 9 141 7.4E-35 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 SUPERFAMILY SSF51445 287 610 3.95E-74 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PRINTS PR00132 Glycosyl hydrolase family 2 signature 403 418 1.6E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PRINTS PR00132 Glycosyl hydrolase family 2 signature 302 316 1.6E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PRINTS PR00132 Glycosyl hydrolase family 2 signature 333 351 1.6E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PRINTS PR00132 Glycosyl hydrolase family 2 signature 112 127 1.6E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Gene3D G3DSA:2.60.40.1560 616 701 1.5E-23 T 23-04-2016 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 SUPERFAMILY SSF49303 188 290 2.85E-20 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 SUPERFAMILY SSF49373 696 742 1.39E-5 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Pfam PF00703 Glycosyl hydrolases family 2 191 290 6.0E-16 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 297 514 6.4E-31 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Gene3D G3DSA:2.60.120.260 13 170 2.1E-46 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Gene3D G3DSA:3.20.20.80 290 612 5.1E-82 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 SUPERFAMILY SSF49785 8 181 1.21E-46 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Gene3D G3DSA:2.60.40.920 702 796 5.3E-6 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Pfam PF16355 Domain of unknown function (DUF4982) 627 687 2.0E-21 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PANTHER PTHR10066:SF71 23 521 4.2E-205 T 23-04-2016 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PANTHER PTHR10066:SF71 558 690 4.2E-205 T 23-04-2016 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 30 180 2.0E-27 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 Gene3D G3DSA:2.60.40.320 171 289 4.0E-30 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PANTHER PTHR10066 23 521 4.2E-205 T 23-04-2016 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 PANTHER PTHR10066 558 690 4.2E-205 T 23-04-2016 NIAKO_RS20240 2acbb8be87bb6233065ad0590077194a 805 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 403 417 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 SUPERFAMILY SSF88659 123 179 1.87E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 179 1.6E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 Pfam PF08281 Sigma-70, region 4 125 174 4.4E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 Pfam PF04542 Sigma-70 region 2 27 92 1.5E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 PANTHER PTHR30173:SF20 1 179 8.6E-40 T 23-04-2016 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 Gene3D G3DSA:1.10.1740.10 8 102 1.7E-18 T 23-04-2016 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 179 1.9E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 Gene3D G3DSA:1.10.10.10 124 179 5.4E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 PANTHER PTHR30173 1 179 8.6E-40 T 23-04-2016 NIAKO_RS19980 f250bcbac6d6b06cb2c445da40c63c77 196 SUPERFAMILY SSF88946 8 105 4.32E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Gene3D G3DSA:3.10.20.30 238 346 4.4E-24 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Gene3D G3DSA:2.40.30.10 4 93 1.2E-17 T 23-04-2016 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 52 59 5.6E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 5.6E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 114 133 5.6E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 SUPERFAMILY SSF63380 3 101 6.21E-18 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 SUPERFAMILY SSF52343 109 244 1.83E-23 T 23-04-2016 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Pfam PF00175 Oxidoreductase NAD-binding domain 115 226 2.6E-12 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 SUPERFAMILY SSF54292 237 347 5.37E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Gene3D G3DSA:3.40.50.80 94 237 6.8E-27 T 23-04-2016 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 297 305 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 270 339 6.9E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 PANTHER PTHR22924 1 304 9.3E-32 T 23-04-2016 NIAKO_RS07885 e05a52db45e4b679d66ab8ba32bc6d29 347 Pfam PF00970 Oxidoreductase FAD-binding domain 13 101 5.4E-6 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 Pfam PF02311 AraC-like ligand binding domain 23 82 4.3E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 Gene3D G3DSA:2.60.120.280 24 162 7.7E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 PANTHER PTHR11019 25 140 1.3E-32 T 23-04-2016 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 PANTHER PTHR11019 167 289 1.3E-32 T 23-04-2016 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 Pfam PF12833 Helix-turn-helix domain 204 283 4.0E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 PANTHER PTHR11019:SF11 25 140 1.3E-32 T 23-04-2016 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 PANTHER PTHR11019:SF11 167 289 1.3E-32 T 23-04-2016 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 SMART SM00342 198 281 2.8E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 SUPERFAMILY SSF46689 235 285 5.38E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 SUPERFAMILY SSF51215 24 162 1.7E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 Gene3D G3DSA:1.10.10.60 241 288 1.7E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03795 168004671800d5386d811d0b98d5e67d 296 Gene3D G3DSA:1.10.10.60 175 235 7.3E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 289 467 1.1E-18 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 SUPERFAMILY SSF50249 8 60 1.54E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 400 431 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 Gene3D G3DSA:3.40.50.150 263 467 1.1E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 451 461 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 PANTHER PTHR11061 157 470 1.9E-152 T 23-04-2016 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 PANTHER PTHR11061 10 141 1.9E-152 T 23-04-2016 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 PANTHER PTHR11061:SF30 157 470 1.9E-152 T 23-04-2016 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 PANTHER PTHR11061:SF30 10 141 1.9E-152 T 23-04-2016 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 461 1.6E-102 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 SUPERFAMILY SSF53335 68 465 4.33E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 Gene3D G3DSA:2.40.50.140 10 80 3.7E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS29890 b02611895a5f0cbcb27689fd4a7d9ba5 470 Pfam PF01938 TRAM domain 10 60 2.1E-6 T 23-04-2016 IPR002792 TRAM domain NIAKO_RS31320 a8644e21ada9f5392a3de84f6163c20b 165 Pfam PF02631 RecX family 41 157 2.7E-20 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 NIAKO_RS31320 a8644e21ada9f5392a3de84f6163c20b 165 Gene3D G3DSA:1.10.10.10 59 104 3.4E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31320 a8644e21ada9f5392a3de84f6163c20b 165 PANTHER PTHR33602 20 165 6.6E-15 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Pfam PF07660 Secretin and TonB N terminus short domain 60 110 7.2E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.170.130.10 220 331 1.9E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF56935 936 980 5.04E-92 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF56935 519 862 5.04E-92 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF56935 397 485 5.04E-92 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF56935 208 352 5.04E-92 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF56935 1013 1104 5.04E-92 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532:SF57 478 516 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532:SF57 129 451 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532:SF57 592 621 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532:SF57 649 1104 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SMART SM00965 60 110 6.6E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 304 334 5.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Pfam PF07715 TonB-dependent Receptor Plug Domain 219 328 5.3E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Pfam PF13715 CarboxypepD_reg-like domain 130 211 3.7E-16 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.60.40.1120 129 219 4.5E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 129 1105 1.7E-260 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 SUPERFAMILY SSF49464 129 222 1.44E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532 478 516 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532 129 451 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532 592 621 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 PANTHER PTHR11532 649 1104 2.2E-237 T 23-04-2016 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Pfam PF00593 TonB dependent receptor 696 1103 2.6E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.40.170.20 1020 1105 3.2E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.40.170.20 945 987 3.2E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.40.170.20 406 876 3.2E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31450 342d09c957b553bbab01eaa81b4568d1 1106 Gene3D G3DSA:2.40.170.20 332 357 3.2E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 PANTHER PTHR30328 3 188 6.2E-32 T 23-04-2016 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 Gene3D G3DSA:1.10.357.10 3 187 1.5E-36 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 PANTHER PTHR30328:SF7 3 188 6.2E-32 T 23-04-2016 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 SUPERFAMILY SSF46689 3 67 1.03E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 SUPERFAMILY SSF48498 78 189 4.75E-19 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS30670 ddb1aee90450f339ad8c52323a9e515d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 1.4E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 SMART SM01193 4 134 3.8E-94 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 366 383 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 107 123 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 337 351 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 161 174 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 37 51 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PRINTS PR00148 Enolase signature 314 325 3.6E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 SMART SM01192 139 428 5.4E-216 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 SUPERFAMILY SSF54826 3 138 8.1E-59 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 421 6.5E-132 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 Gene3D G3DSA:3.30.390.10 4 126 1.6E-57 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 Hamap MF_00318 Enolase [eno]. 2 414 45.127 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 1.3E-207 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 Gene3D G3DSA:3.20.20.120 128 422 4.1E-137 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 ProSitePatterns PS00164 Enolase signature. 337 350 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PANTHER PTHR11902 1 420 4.3E-265 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 SUPERFAMILY SSF51604 138 422 1.5E-130 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 PIRSF PIRSF001400 1 426 1.3E-195 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NIAKO_RS32735 d7465f52582167135df26e47e4aa930d 429 Pfam PF03952 Enolase, N-terminal domain 4 134 4.8E-62 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NIAKO_RS37270 4258291b5727b8606d2c2fc9e9d654c8 991 Pfam PF01757 Acyltransferase family 17 330 2.3E-14 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Gene3D G3DSA:2.60.40.1120 455 514 4.5E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Pfam PF07676 WD40-like Beta Propeller Repeat 309 334 0.071 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Pfam PF07676 WD40-like Beta Propeller Repeat 187 212 0.29 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 SUPERFAMILY SSF103088 550 663 2.62E-34 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Gene3D G3DSA:3.30.1330.60 548 664 2.7E-41 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 PANTHER PTHR30128 543 664 1.8E-40 T 23-04-2016 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 PRINTS PR01021 OMPA domain signature 602 618 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 PRINTS PR01021 OMPA domain signature 557 579 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 PRINTS PR01021 OMPA domain signature 587 602 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Gene3D G3DSA:1.25.40.10 25 149 1.9E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 SUPERFAMILY SSF49464 455 551 6.67E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 SUPERFAMILY SSF82171 175 378 1.41E-9 T 23-04-2016 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Gene3D G3DSA:2.130.10.10 189 375 1.5E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 Pfam PF00691 OmpA family 556 645 2.5E-20 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS19265 b1865e1aafdd07722c0698eedd9cc985 666 SUPERFAMILY SSF48452 23 153 2.83E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 PANTHER PTHR10342 190 596 6.5E-46 T 23-04-2016 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 SUPERFAMILY SSF53649 220 534 7.52E-50 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 Pfam PF00884 Sulfatase 221 506 4.4E-37 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 PIRSF PIRSF005091 1 601 3.9E-65 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 Gene3D G3DSA:3.40.720.10 221 521 5.1E-39 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS21790 4875673e3cf1b88f055696c9e2682db5 603 PANTHER PTHR10342:SF236 190 596 6.5E-46 T 23-04-2016 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 Gene3D G3DSA:2.30.30.30 131 187 1.6E-27 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 SUPERFAMILY SSF82679 10 121 2.49E-26 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 SMART SM00739 133 160 6.7E-4 T 23-04-2016 IPR005824 KOW NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 Pfam PF00467 KOW motif 136 169 1.1E-5 T 23-04-2016 IPR005824 KOW NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 Pfam PF02357 Transcription termination factor nusG 11 116 5.2E-19 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 9 187 21.008 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 Gene3D G3DSA:3.30.70.940 10 121 1.3E-29 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 SMART SM00738 9 119 5.2E-19 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 PRINTS PR00338 Transcription termination factor NUSG signature 64 76 4.5E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 PRINTS PR00338 Transcription termination factor NUSG signature 145 160 4.5E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 PRINTS PR00338 Transcription termination factor NUSG signature 163 179 4.5E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 12 187 9.7E-51 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 ProSitePatterns PS01014 Transcription termination factor nusG signature. 170 179 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 SUPERFAMILY SSF50104 133 187 1.0E-18 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS24215 3a79d8ef2d41f1e069ee704f74787b6a 188 PANTHER PTHR30265 1 187 9.6E-46 T 23-04-2016 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 SUPERFAMILY SSF48498 91 189 3.67E-6 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 72 189 1.3E-13 T 23-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 PANTHER PTHR30055 1 189 2.5E-35 T 23-04-2016 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 PANTHER PTHR30055:SF82 1 189 2.5E-35 T 23-04-2016 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 Gene3D G3DSA:1.10.357.10 3 187 4.0E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 SUPERFAMILY SSF46689 3 70 2.39E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS07830 67812ad0c57ad5376d4547e5d2c1d105 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 5.1E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS04770 d4f7b3b469b37d95eb149a884a137bf2 351 Pfam PF00144 Beta-lactamase 49 330 3.7E-45 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS04770 d4f7b3b469b37d95eb149a884a137bf2 351 SUPERFAMILY SSF56601 12 322 8.03E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS04770 d4f7b3b469b37d95eb149a884a137bf2 351 Gene3D G3DSA:3.40.710.10 23 337 3.0E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS04770 d4f7b3b469b37d95eb149a884a137bf2 351 PANTHER PTHR22935 24 289 6.1E-54 T 23-04-2016 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 SUPERFAMILY SSF74653 68 149 7.32E-20 T 23-04-2016 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 Gene3D G3DSA:3.30.1150.10 66 152 2.7E-11 T 23-04-2016 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 PANTHER PTHR33446 58 152 3.3E-23 T 23-04-2016 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 75 151 1.6E-20 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 PRINTS PR01374 Gram-negative bacterial tonB protein signature 70 91 7.2E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 109 7.2E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 PANTHER PTHR33446:SF2 58 152 3.3E-23 T 23-04-2016 NIAKO_RS37135 1d8a82c32394f183191e64f93d2b9d9b 153 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 77 151 1.8E-12 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS15265 012194234dbf8107e6be913da21d9fae 473 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 147 363 1.0E-26 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT NIAKO_RS15265 012194234dbf8107e6be913da21d9fae 473 PIRSF PIRSF016636 1 473 2.6E-147 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB NIAKO_RS15265 012194234dbf8107e6be913da21d9fae 473 PANTHER PTHR13285:SF24 1 443 1.4E-126 T 23-04-2016 NIAKO_RS15265 012194234dbf8107e6be913da21d9fae 473 PANTHER PTHR13285 1 443 1.4E-126 T 23-04-2016 NIAKO_RS15265 012194234dbf8107e6be913da21d9fae 473 PIRSF PIRSF500217 1 473 5.4E-150 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 Gene3D G3DSA:2.120.10.30 150 436 1.5E-41 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 PANTHER PTHR13833 22 439 6.0E-20 T 23-04-2016 NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 SUPERFAMILY SSF101898 155 436 4.97E-26 T 23-04-2016 NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 Pfam PF01436 NHL repeat 409 435 6.4E-7 T 23-04-2016 IPR001258 NHL repeat GO:0005515 NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 SUPERFAMILY SSF81296 39 119 1.16E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 Gene3D G3DSA:2.60.40.10 37 122 6.5E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 PANTHER PTHR13833:SF48 22 439 6.0E-20 T 23-04-2016 NIAKO_RS17205 73eb4f8a3993f5cb32aaf5cb6074d79c 439 Pfam PF01833 IPT/TIG domain 49 111 2.0E-4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 68 1.3E-22 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Pfam PF13193 AMP-binding enzyme C-terminal domain 522 601 2.3E-20 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Gene3D G3DSA:3.40.50.980 257 415 5.2E-27 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 PANTHER PTHR24095 6 633 0.0 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 PANTHER PTHR24095:SF178 6 633 0.0 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Pfam PF00501 AMP-binding enzyme 71 513 2.3E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Gene3D G3DSA:2.30.38.10 430 506 3.3E-6 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 8 635 3.1E-281 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 SUPERFAMILY SSF56801 6 633 1.57E-167 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 ProSitePatterns PS00455 Putative AMP-binding domain signature. 251 262 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Gene3D G3DSA:3.40.50.980 67 256 1.3E-41 T 23-04-2016 NIAKO_RS32775 a3826465f8d2de09b187f4237dadcd26 638 Gene3D G3DSA:3.30.300.30 508 614 1.9E-22 T 23-04-2016 NIAKO_RS21675 ccd5a70a3908cdf1ba0cf28c1b48816b 265 Pfam PF00535 Glycosyl transferase family 2 5 171 3.3E-30 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS21675 ccd5a70a3908cdf1ba0cf28c1b48816b 265 PANTHER PTHR10859 5 244 1.6E-64 T 23-04-2016 NIAKO_RS21675 ccd5a70a3908cdf1ba0cf28c1b48816b 265 SUPERFAMILY SSF53448 5 233 4.22E-42 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS21675 ccd5a70a3908cdf1ba0cf28c1b48816b 265 Gene3D G3DSA:3.90.550.10 5 199 3.2E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 SMART SM00382 109 270 6.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 SMART SM00994 5 44 2.5E-16 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Pfam PF06689 ClpX C4-type zinc finger 6 43 2.2E-15 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 411 45.301 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 PANTHER PTHR11262 3 387 1.8E-197 T 23-04-2016 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 SUPERFAMILY SSF52540 63 401 1.32E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 SUPERFAMILY SSF57716 6 41 2.99E-9 T 23-04-2016 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 387 2.9E-171 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 113 126 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 387 7.8E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 SMART SM01086 312 401 1.2E-23 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 6.4E-44 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Gene3D G3DSA:3.40.50.300 289 307 4.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Gene3D G3DSA:3.40.50.300 65 251 4.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 PANTHER PTHR11262:SF4 3 387 1.8E-197 T 23-04-2016 NIAKO_RS34320 762e5a4ff4e9feb56d782d2e72e52d27 412 Gene3D G3DSA:1.10.8.60 311 402 1.2E-27 T 23-04-2016 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 PANTHER PTHR23088 1 156 3.0E-90 T 23-04-2016 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 PANTHER PTHR23088 190 291 3.0E-90 T 23-04-2016 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 Pfam PF00795 Carbon-nitrogen hydrolase 6 277 3.7E-33 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 SUPERFAMILY SSF56317 1 155 1.1E-36 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 SUPERFAMILY SSF56317 193 287 7.33E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 Gene3D G3DSA:3.60.110.10 190 287 7.5E-61 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 Gene3D G3DSA:3.60.110.10 1 156 7.5E-61 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 PANTHER PTHR23088:SF28 1 156 3.0E-90 T 23-04-2016 NIAKO_RS31125 2e051922fd64e27828517309c7ebd577 292 PANTHER PTHR23088:SF28 190 291 3.0E-90 T 23-04-2016 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Pfam PF02559 CarD-like/TRCF domain 459 554 2.0E-23 T 23-04-2016 IPR003711 CarD-like/TRCF domain NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 PANTHER PTHR14025:SF21 363 1132 0.0 T 23-04-2016 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SMART SM01058 458 555 3.4E-38 T 23-04-2016 IPR003711 CarD-like/TRCF domain NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Gene3D G3DSA:3.40.50.300 568 765 2.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 168 1067 2.4E-296 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 54 1102 27.162 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF143517 984 1133 2.48E-32 T 23-04-2016 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Pfam PF00270 DEAD/DEAH box helicase 604 741 1.8E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 PANTHER PTHR14025 363 1132 0.0 T 23-04-2016 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF141259 450 527 9.94E-20 T 23-04-2016 IPR003711 CarD-like/TRCF domain NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SMART SM00490 805 889 1.2E-16 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Pfam PF00271 Helicase conserved C-terminal domain 786 888 1.2E-14 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF52540 349 442 4.18E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SMART SM00487 579 769 6.3E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Gene3D G3DSA:3.30.2060.10 153 229 5.0E-11 T 23-04-2016 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SMART SM00982 994 1094 1.5E-28 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF52540 506 763 1.63E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF52540 27 280 1.99E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Pfam PF03461 TRCF domain 996 1085 2.0E-24 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 Gene3D G3DSA:3.40.50.300 780 935 7.8E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27795 f976fd2ed11f4fd2fe629989633b7035 1146 SUPERFAMILY SSF52540 761 969 1.17E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 SUPERFAMILY SSF53067 133 291 1.94E-33 T 23-04-2016 NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 Gene3D G3DSA:3.30.420.150 132 290 4.2E-25 T 23-04-2016 NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 Pfam PF02541 Ppx/GppA phosphatase family 30 287 1.4E-37 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 PANTHER PTHR30005 1 284 5.2E-59 T 23-04-2016 NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 Gene3D G3DSA:3.30.420.40 1 122 2.1E-35 T 23-04-2016 NIAKO_RS12730 da4070bf76c63c071524f1f0b725f3e0 301 SUPERFAMILY SSF53067 2 121 9.81E-30 T 23-04-2016 NIAKO_RS27400 e44eaffbba2313e45eff3e382a08f0a2 265 PANTHER PTHR30413 19 265 5.6E-33 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS27400 e44eaffbba2313e45eff3e382a08f0a2 265 PANTHER PTHR30413:SF8 19 265 5.6E-33 T 23-04-2016 NIAKO_RS27400 e44eaffbba2313e45eff3e382a08f0a2 265 Pfam PF01061 ABC-2 type transporter 19 218 2.9E-15 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PANTHER PTHR24322:SF328 157 189 1.2E-28 T 23-04-2016 NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PANTHER PTHR24322:SF328 11 141 1.2E-28 T 23-04-2016 NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 Gene3D G3DSA:3.40.50.720 2 252 9.2E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PANTHER PTHR24322 157 189 1.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 PANTHER PTHR24322 11 141 1.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 9.2E-48 T 23-04-2016 NIAKO_RS18560 ffb0c5b55b29959d53843ce3f9e50b99 255 SUPERFAMILY SSF51735 5 252 3.03E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 159 0.0087 T 23-04-2016 NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 PANTHER PTHR10366 13 321 7.0E-78 T 23-04-2016 NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 PANTHER PTHR10366:SF466 13 321 7.0E-78 T 23-04-2016 NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 Gene3D G3DSA:3.90.25.10 182 323 3.6E-30 T 23-04-2016 NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 253 3.1E-47 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 Gene3D G3DSA:3.40.50.720 7 181 9.9E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33345 12d1fd9a93d98af5f141cb24d52716f8 324 SUPERFAMILY SSF51735 8 322 1.94E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 52 181 1.3E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 PANTHER PTHR10173 50 195 2.3E-59 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 Gene3D G3DSA:2.170.150.20 47 184 2.0E-59 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 PANTHER PTHR10173:SF18 50 195 2.3E-59 T 23-04-2016 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 Pfam PF01641 SelR domain 56 174 3.7E-51 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 53 176 35.417 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS29895 601cdbcba178681cbbdf8ce2b35cb5df 195 SUPERFAMILY SSF51316 51 183 2.93E-56 T 23-04-2016 IPR011057 Mss4-like NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 PIRSF PIRSF000386 1 226 1.2E-96 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 220 1.5E-59 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 PANTHER PTHR32125:SF1 1 226 2.0E-97 T 23-04-2016 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 226 95.137 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 SUPERFAMILY SSF75217 1 225 5.23E-91 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 PANTHER PTHR32125 1 226 2.0E-97 T 23-04-2016 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 226 1.9E-86 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 Gene3D G3DSA:1.10.1270.20 161 225 2.0E-26 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NIAKO_RS34590 acdb8b7d017790dba505954742b8b5e7 226 Gene3D G3DSA:3.40.1280.10 1 159 1.4E-64 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 Gene3D G3DSA:3.30.565.10 283 396 1.0E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 Gene3D G3DSA:1.10.287.130 210 272 1.4E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 SMART SM00388 210 276 1.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 275 3.4E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 PANTHER PTHR24423 150 396 3.4E-25 T 23-04-2016 NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 PANTHER PTHR24423 3 9 3.4E-25 T 23-04-2016 NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 SUPERFAMILY SSF55874 282 397 3.14E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 396 3.1E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS20710 2d549953265f6b6456d5f743f076a49b 417 SUPERFAMILY SSF47384 194 277 1.73E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 PANTHER PTHR30273 202 419 4.9E-66 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 PANTHER PTHR30273 1 136 4.9E-66 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 PANTHER PTHR30273:SF2 202 419 4.9E-66 T 23-04-2016 NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 PANTHER PTHR30273:SF2 1 136 4.9E-66 T 23-04-2016 NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 Pfam PF16344 Domain of unknown function (DUF4974) 318 415 1.0E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS19975 94215a604491d4341a9803bd5b950eff 419 Pfam PF04773 FecR protein 200 296 1.2E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF49695 754 837 2.65E-15 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 PANTHER PTHR16021 111 467 1.7E-14 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Pfam PF00030 Beta/Gamma crystallin 708 794 8.4E-6 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF49299 581 662 2.82E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF49695 481 563 1.27E-9 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 378 444 5.0E-8 T 23-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SMART SM00247 479 564 0.0086 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SMART SM00247 753 837 0.032 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SMART SM00247 662 746 9.7E-4 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:2.60.120.380 346 457 6.7E-11 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:3.40.390.10 281 323 1.8E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:2.60.20.10 479 564 1.9E-19 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:3.40.390.10 234 280 7.8E-5 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF55486 190 314 1.59E-8 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 853 922 3.8E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF49695 663 745 7.29E-16 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 PANTHER PTHR16021:SF8 111 467 1.7E-14 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 SUPERFAMILY SSF89260 349 448 6.67E-8 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:2.60.20.10 753 837 6.3E-26 T 23-04-2016 NIAKO_RS37080 3b8dd19ca4bc12000f58276c30c54470 922 Gene3D G3DSA:2.60.20.10 663 746 1.4E-26 T 23-04-2016 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 27 193 7.4E-44 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 SUPERFAMILY SSF51735 24 194 8.49E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 PANTHER PTHR21371 4 355 3.7E-158 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 Gene3D G3DSA:1.10.1040.10 43 345 4.0E-94 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 28 347 6.4E-95 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 201 345 4.7E-41 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00510 3f8083e8980f9b6938b5c57e5b77f645 355 SUPERFAMILY SSF48179 201 348 3.57E-52 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 152 5.1E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 Gene3D G3DSA:2.40.170.20 154 664 1.2E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 PANTHER PTHR32552:SF38 1 665 2.1E-35 T 23-04-2016 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 Gene3D G3DSA:2.170.130.10 41 153 6.2E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 SUPERFAMILY SSF56935 30 664 5.86E-70 T 23-04-2016 NIAKO_RS01400 6e1224f1708e4b397f5148eec8272d55 665 PANTHER PTHR32552 1 665 2.1E-35 T 23-04-2016 NIAKO_RS34505 cd70d324a8fef4d5a8d0dbb832a6b6bf 389 PANTHER PTHR30605 19 389 5.9E-111 T 23-04-2016 NIAKO_RS34505 cd70d324a8fef4d5a8d0dbb832a6b6bf 389 SUPERFAMILY SSF53067 162 341 6.26E-11 T 23-04-2016 NIAKO_RS34505 cd70d324a8fef4d5a8d0dbb832a6b6bf 389 SUPERFAMILY SSF53067 90 132 6.26E-11 T 23-04-2016 NIAKO_RS34505 cd70d324a8fef4d5a8d0dbb832a6b6bf 389 Pfam PF03702 Uncharacterised protein family (UPF0075) 26 384 1.3E-69 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 NIAKO_RS34505 cd70d324a8fef4d5a8d0dbb832a6b6bf 389 Gene3D G3DSA:3.30.420.40 26 211 2.7E-51 T 23-04-2016 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 Pfam PF01799 [2Fe-2S] binding domain 74 145 6.7E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 SUPERFAMILY SSF54292 3 79 1.17E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 Gene3D G3DSA:1.10.150.120 76 154 4.1E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 Gene3D G3DSA:3.10.20.30 3 75 5.4E-28 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 PANTHER PTHR11908:SF82 1 138 4.4E-34 T 23-04-2016 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 59 3.5E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 PANTHER PTHR11908 1 138 4.4E-34 T 23-04-2016 NIAKO_RS02695 5565da41cf14b9d8fa7352bdbb82e7a8 159 SUPERFAMILY SSF47741 74 153 4.84E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 Pfam PF00801 PKD domain 303 342 5.2E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 Pfam PF00801 PKD domain 375 435 2.5E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 Gene3D G3DSA:2.60.40.670 283 354 9.6E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 Pfam PF13585 C-terminal domain of CHU protein family 761 832 9.0E-8 T 23-04-2016 NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 SUPERFAMILY SSF49299 241 347 1.57E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 SUPERFAMILY SSF49299 367 446 1.83E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 Gene3D G3DSA:2.60.40.670 371 449 7.7E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 SMART SM00089 363 447 6.0E-10 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25010 f58b9d128e9e6dad23c409cf292120bc 847 SMART SM00089 277 361 4.2E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 701 764 5.2E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF13426 PAS domain 569 671 1.3E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF55785 133 246 1.74E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF55785 375 502 8.2E-22 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF08447 PAS fold 414 498 8.3E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF08447 PAS fold 288 371 9.5E-21 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:3.30.565.10 753 931 6.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00388 699 767 2.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 812 931 2.4E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:1.10.287.130 691 752 3.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 509 3.1E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 384 3.8E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 552 679 2.2E-20 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00086 461 505 0.0029 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00086 630 672 0.16 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00086 336 378 2.4E-9 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:3.30.450.20 129 251 2.1E-12 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Pfam PF08448 PAS fold 142 251 1.2E-14 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00387 808 932 3.7E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF55785 570 680 1.92E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:3.30.450.20 381 502 2.8E-29 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:3.30.450.20 257 375 9.4E-33 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00091 390 455 7.7E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00091 264 330 1.8E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00091 133 200 0.78 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SMART SM00091 557 623 0.1 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 911 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 930 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 874 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 PANTHER PTHR24423 240 503 9.4E-106 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 PANTHER PTHR24423 678 931 9.4E-106 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF55785 269 380 3.91E-28 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 Gene3D G3DSA:3.30.450.20 547 666 2.7E-20 T 23-04-2016 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF47384 683 764 1.53E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36670 b26f9d2111f93e8b9788f8ac50d54f78 932 SUPERFAMILY SSF55874 757 931 1.44E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 343 373 3.9E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Gene3D G3DSA:2.170.130.10 240 375 3.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Pfam PF07715 TonB-dependent Receptor Plug Domain 238 367 2.3E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Gene3D G3DSA:2.40.170.20 445 901 4.2E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Gene3D G3DSA:2.40.170.20 963 1009 4.2E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Gene3D G3DSA:2.40.170.20 1050 1094 4.2E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Gene3D G3DSA:2.60.40.1120 148 207 6.0E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF49464 146 213 2.49E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 147 1125 6.6E-196 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532:SF57 147 313 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532:SF57 601 1124 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532:SF57 334 514 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Pfam PF13715 CarboxypepD_reg-like domain 148 228 7.3E-9 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532 147 313 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532 601 1124 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 PANTHER PTHR11532 334 514 3.0E-163 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF56935 561 901 1.05E-73 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF56935 227 391 1.05E-73 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF56935 970 1014 1.05E-73 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF56935 1044 1109 1.05E-73 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 SUPERFAMILY SSF56935 443 531 1.05E-73 T 23-04-2016 NIAKO_RS06820 b719af00a017b94a32fd202f73a9293f 1126 Pfam PF07660 Secretin and TonB N terminus short domain 91 129 3.3E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 Gene3D G3DSA:2.40.50.40 130 200 4.7E-22 T 23-04-2016 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 PANTHER PTHR26402 3 116 2.4E-28 T 23-04-2016 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 SMART SM00448 3 111 1.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 SMART SM00850 139 232 1.4E-20 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 Pfam PF00072 Response regulator receiver domain 6 112 1.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 SUPERFAMILY SSF52172 2 122 6.12E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 Gene3D G3DSA:3.40.50.2300 1 121 3.9E-25 T 23-04-2016 NIAKO_RS23270 956f2a1161f1448c517c9cae5d8e4e87 235 Pfam PF04397 LytTr DNA-binding domain 140 229 1.9E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:3.30.70.1430 636 746 4.4E-6 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:3.30.2090.10 801 894 8.0E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PANTHER PTHR32063 14 518 4.4E-254 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PANTHER PTHR32063 1099 1181 4.4E-254 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PANTHER PTHR32063 564 1080 4.4E-254 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PRINTS PR00702 Acriflavin resistance protein family signature 51 69 1.5E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 1.5E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.5E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PRINTS PR00702 Acriflavin resistance protein family signature 404 428 1.5E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 PRINTS PR00702 Acriflavin resistance protein family signature 23 47 1.5E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:1.10.3850.10 900 1137 1.1E-49 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82693 53 148 3.4E-19 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82693 281 338 1.26E-15 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82693 152 195 1.26E-15 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:1.20.1640.10 298 518 3.4E-42 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82693 632 746 4.97E-5 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82714 802 892 3.27E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82714 196 278 8.63E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82866 891 1139 1.44E-37 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 SUPERFAMILY SSF82866 303 511 6.15E-34 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:3.30.70.1430 53 157 5.4E-23 T 23-04-2016 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Pfam PF00873 AcrB/AcrD/AcrF family 19 1135 1.5E-172 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS28585 eed57e3dec12fc0ef8e633a0ed0c6aa4 1201 Gene3D G3DSA:3.30.2090.10 196 279 6.6E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.60.40.1120 102 187 6.4E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SMART SM00965 38 89 1.7E-4 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.40.170.20 904 963 2.7E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.40.170.20 1012 1084 2.7E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.40.170.20 325 348 2.7E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.40.170.20 409 857 2.7E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532:SF57 102 271 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532:SF57 647 1082 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532:SF57 291 616 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SUPERFAMILY SSF49464 101 180 2.35E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 102 1084 3.0E-206 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Gene3D G3DSA:2.170.130.10 188 324 8.0E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532 102 271 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532 647 1082 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 PANTHER PTHR11532 291 616 4.3E-177 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SUPERFAMILY SSF56935 177 348 2.93E-73 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SUPERFAMILY SSF56935 1002 1084 2.93E-73 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SUPERFAMILY SSF56935 911 955 2.93E-73 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 SUPERFAMILY SSF56935 400 859 2.93E-73 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Pfam PF07715 TonB-dependent Receptor Plug Domain 193 324 3.1E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 Pfam PF13715 CarboxypepD_reg-like domain 103 181 2.9E-11 T 23-04-2016 NIAKO_RS02120 397fdee3b569fa0cd184e166820a1374 1084 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 300 330 3.1E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Gene3D G3DSA:3.90.105.10 22 43 3.4E-16 T 23-04-2016 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Gene3D G3DSA:3.90.105.10 137 157 3.4E-16 T 23-04-2016 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 162 3.8E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Pfam PF00994 Probable molybdopterin binding domain 175 311 9.2E-22 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 172 307 3.9E-26 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 SMART SM00852 175 313 2.6E-31 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 SUPERFAMILY SSF63867 321 392 1.19E-12 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 SUPERFAMILY SSF63882 1 170 3.14E-48 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Pfam PF03454 MoeA C-terminal region (domain IV) 325 392 3.8E-12 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Gene3D G3DSA:3.40.980.10 158 322 3.3E-50 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Gene3D G3DSA:2.40.340.10 323 392 2.4E-12 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 SUPERFAMILY SSF53218 172 317 4.71E-37 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 PANTHER PTHR10192 1 394 8.1E-124 T 23-04-2016 NIAKO_RS02715 a10fee94298d987f0875f0e5de785eba 394 Gene3D G3DSA:2.170.190.11 44 136 9.7E-26 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 Gene3D G3DSA:2.30.40.10 617 645 1.6E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 Gene3D G3DSA:2.30.40.10 250 310 1.6E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 Gene3D G3DSA:3.20.20.140 311 592 5.6E-48 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271 540 643 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271 259 465 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271 486 515 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 Gene3D G3DSA:2.30.40.10 593 616 3.1E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 SUPERFAMILY SSF51556 308 607 1.07E-46 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271:SF33 540 643 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271:SF33 259 465 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 PANTHER PTHR11271:SF33 486 515 1.8E-30 T 23-04-2016 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 SUPERFAMILY SSF51338 606 643 1.48E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 SUPERFAMILY SSF51338 252 309 1.48E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS08960 8442d3666cae95a0ff2839d480b63370 655 Pfam PF01979 Amidohydrolase family 305 642 5.0E-23 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS02940 a98970d8d7a60c98eb31d9a8e9bf98f4 191 PANTHER PTHR24567 25 183 7.8E-23 T 23-04-2016 NIAKO_RS02940 a98970d8d7a60c98eb31d9a8e9bf98f4 191 Gene3D G3DSA:2.60.120.10 12 151 1.0E-29 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02940 a98970d8d7a60c98eb31d9a8e9bf98f4 191 SUPERFAMILY SSF51206 19 121 1.57E-17 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS02940 a98970d8d7a60c98eb31d9a8e9bf98f4 191 Pfam PF00027 Cyclic nucleotide-binding domain 29 116 1.2E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS02940 a98970d8d7a60c98eb31d9a8e9bf98f4 191 PANTHER PTHR24567:SF33 25 183 7.8E-23 T 23-04-2016 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 SUPERFAMILY SSF51735 3 160 2.15E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 263 3.9E-28 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 22.413 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 SUPERFAMILY SSF48179 161 264 6.12E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 PANTHER PTHR11645 2 262 1.7E-96 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 PIRSF PIRSF000193 2 268 9.9E-73 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 97 5.4E-20 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 Gene3D G3DSA:1.10.3730.10 161 264 1.1E-30 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 263 5.7E-72 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NIAKO_RS23135 e3a5b7aa445df559b143cd11643d2c16 268 Gene3D G3DSA:3.40.50.720 1 160 4.3E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 PANTHER PTHR30173:SF20 1 155 1.5E-29 T 23-04-2016 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 Pfam PF04542 Sigma-70 region 2 6 53 2.9E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 SUPERFAMILY SSF88946 4 56 7.06E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 SUPERFAMILY SSF88659 74 138 2.99E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 PANTHER PTHR30173 1 155 1.5E-29 T 23-04-2016 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 Pfam PF08281 Sigma-70, region 4 87 132 1.9E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 Gene3D G3DSA:1.10.10.10 78 139 1.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 Gene3D G3DSA:1.10.1740.10 2 70 1.0E-8 T 23-04-2016 NIAKO_RS19475 7142a95a5a3e85b4ae20afc69a9084c7 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 138 6.9E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 277 3.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 Gene3D G3DSA:1.10.287.130 201 273 1.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 SUPERFAMILY SSF55874 283 419 1.57E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 PANTHER PTHR24423 151 396 3.7E-34 T 23-04-2016 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 PANTHER PTHR24423 3 9 3.7E-34 T 23-04-2016 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 SMART SM00388 211 277 8.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 406 7.4E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 SUPERFAMILY SSF47384 194 278 1.22E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS03695 6b20770db570c1d33a016a34a7846b0a 419 Gene3D G3DSA:3.30.565.10 283 419 3.6E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 179 3.2E-17 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 SUPERFAMILY SSF88659 114 180 6.73E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 Pfam PF04542 Sigma-70 region 2 27 95 1.4E-4 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 PANTHER PTHR30173 7 181 3.0E-14 T 23-04-2016 NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 SUPERFAMILY SSF88946 4 110 5.76E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21695 d91242d9165efee1e00cfd50527eae3f 190 Gene3D G3DSA:1.10.1740.10 4 115 1.5E-13 T 23-04-2016 NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 Gene3D G3DSA:3.40.50.300 27 197 8.6E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 PANTHER PTHR24220:SF459 4 198 1.2E-43 T 23-04-2016 NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 SUPERFAMILY SSF52540 26 197 2.54E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 SMART SM00382 32 211 0.0047 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 PANTHER PTHR24220 4 198 1.2E-43 T 23-04-2016 NIAKO_RS34725 81e4d4041ed9c771bb82175b26d9e666 213 Pfam PF00005 ABC transporter 27 168 1.7E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 209 239 5.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 233 5.8E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 ProSitePatterns PS00018 EF-hand calcium-binding domain. 854 866 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 37 1045 2.0E-267 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.40.170.20 977 1044 8.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.40.170.20 321 665 8.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.40.170.20 698 808 8.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.40.170.20 873 939 8.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 PANTHER PTHR11532:SF57 463 1043 1.2E-281 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 PANTHER PTHR11532:SF57 8 377 1.2E-281 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Pfam PF13715 CarboxypepD_reg-like domain 38 118 2.9E-12 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF56935 450 799 6.41E-69 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF56935 114 257 6.41E-69 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF56935 314 411 6.41E-69 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF56935 867 909 6.41E-69 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF56935 953 1045 6.41E-69 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 PANTHER PTHR11532 463 1043 1.2E-281 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 PANTHER PTHR11532 8 377 1.2E-281 T 23-04-2016 NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 SUPERFAMILY SSF49464 37 116 1.1E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.60.40.1120 38 128 1.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13760 11fa1e28c158807e49261a34b8c75f4b 1045 Gene3D G3DSA:2.170.130.10 131 241 7.7E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 27 189 5.8E-33 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 SUPERFAMILY SSF50891 23 192 6.43E-36 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.0E-5 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 145 4.0E-5 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 40 55 4.0E-5 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 PANTHER PTHR11071:SF192 28 193 1.0E-24 T 23-04-2016 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 PANTHER PTHR11071 28 193 1.0E-24 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NIAKO_RS28875 b94c1c4458ca0f7a5db7d17621d85134 195 Gene3D G3DSA:2.40.100.10 23 184 5.5E-37 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS08860 55d26a49a75ad70e6cdc6fc7192d58ed 334 Gene3D G3DSA:3.30.565.10 208 334 1.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08860 55d26a49a75ad70e6cdc6fc7192d58ed 334 SUPERFAMILY SSF55874 211 333 7.07E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08860 55d26a49a75ad70e6cdc6fc7192d58ed 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 333 3.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08860 55d26a49a75ad70e6cdc6fc7192d58ed 334 PANTHER PTHR24421 120 334 1.6E-26 T 23-04-2016 NIAKO_RS08860 55d26a49a75ad70e6cdc6fc7192d58ed 334 Pfam PF07730 Histidine kinase 142 198 1.1E-6 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS17335 5bcc438d830143ab3f77ff68ac63bb1c 366 PANTHER PTHR21716 20 335 5.6E-60 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS17335 5bcc438d830143ab3f77ff68ac63bb1c 366 Pfam PF01594 Domain of unknown function DUF20 15 335 1.5E-56 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PANTHER PTHR11777:SF9 1 878 0.0 T 23-04-2016 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 SMART SM00863 657 701 1.7E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 159.405 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 Gene3D G3DSA:3.30.980.10 563 633 2.0E-4 T 23-04-2016 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 SUPERFAMILY SSF50447 466 542 3.11E-15 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 SUPERFAMILY SSF55186 556 727 1.19E-51 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PANTHER PTHR11777 1 878 0.0 T 23-04-2016 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 SUPERFAMILY SSF101353 254 476 1.44E-62 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 Gene3D G3DSA:3.30.930.10 1 249 3.6E-116 T 23-04-2016 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 Pfam PF01411 tRNA synthetases class II (A) 5 558 1.4E-202 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 316 329 3.1E-29 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 308 3.1E-29 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 3.1E-29 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 3.1E-29 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 3.1E-29 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 657 701 2.0E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 SUPERFAMILY SSF55681 2 253 2.24E-100 T 23-04-2016 NIAKO_RS28220 ff3648e7114d9374d70f74d2d9ed9c7d 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 861 9.7E-281 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NIAKO_RS10405 fb5623a906a2f58c011e9f1dfb07d0a8 233 Pfam PF09697 Protein of unknown function (Porph_ging) 139 169 5.0E-6 T 23-04-2016 IPR005901 GLPGLI family protein NIAKO_RS10405 fb5623a906a2f58c011e9f1dfb07d0a8 233 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 4 215 1.7E-41 T 23-04-2016 IPR005901 GLPGLI family protein NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 PANTHER PTHR30349 64 451 7.9E-39 T 23-04-2016 NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 SUPERFAMILY SSF56349 136 425 2.35E-28 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 Pfam PF13102 Phage integrase SAM-like domain 8 190 8.9E-22 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 Gene3D G3DSA:1.10.443.10 250 428 3.9E-19 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 PANTHER PTHR30349:SF34 64 451 7.9E-39 T 23-04-2016 NIAKO_RS05400 75a7d4bbb01e60dfa4ea68b212b2742d 457 Pfam PF00589 Phage integrase family 250 420 7.8E-10 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Pfam PF08448 PAS fold 25 133 2.3E-5 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Pfam PF13426 PAS domain 291 379 9.8E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SUPERFAMILY SSF55785 128 255 1.24E-25 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Pfam PF00989 PAS fold 144 254 3.1E-11 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SUPERFAMILY SSF55874 491 600 6.29E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 PANTHER PTHR24423 113 600 1.2E-48 T 23-04-2016 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Gene3D G3DSA:3.30.565.10 510 601 2.8E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Gene3D G3DSA:3.30.565.10 453 474 2.8E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Gene3D G3DSA:3.30.450.20 17 137 2.1E-9 T 23-04-2016 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 600 1.3E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SUPERFAMILY SSF55785 254 379 2.51E-18 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 262 1.1E-24 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 388 4.2E-18 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SUPERFAMILY SSF55785 29 140 5.76E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SMART SM00387 512 602 8.6E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Pfam PF07730 Histidine kinase 410 468 1.1E-7 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SMART SM00091 143 209 6.4E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 SMART SM00091 269 336 9.8E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Gene3D G3DSA:3.30.450.20 255 379 2.4E-18 T 23-04-2016 NIAKO_RS21520 b24df29091a66a2bfa83cdcd97d0ed88 602 Gene3D G3DSA:3.30.450.20 138 254 1.7E-25 T 23-04-2016 NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 Pfam PF00005 ABC transporter 21 164 1.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 SMART SM00382 30 234 1.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 PANTHER PTHR24220 7 224 3.2E-114 T 23-04-2016 NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 Gene3D G3DSA:3.40.50.300 2 226 4.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 PANTHER PTHR24220:SF480 7 224 3.2E-114 T 23-04-2016 NIAKO_RS21085 7e2e2501191adaef62380c60e80d76ec 338 SUPERFAMILY SSF52540 4 226 9.35E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 3 213 1.3E-28 T 23-04-2016 IPR001099 Chalcone/stilbene synthase, N-terminal NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 PANTHER PTHR11877:SF10 4 362 1.1E-64 T 23-04-2016 NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 Gene3D G3DSA:3.40.47.10 221 362 6.1E-38 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 Gene3D G3DSA:3.40.47.10 3 217 5.2E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 228 362 1.2E-26 T 23-04-2016 IPR012328 Chalcone/stilbene synthase, C-terminal NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 PANTHER PTHR11877 4 362 1.1E-64 T 23-04-2016 NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 SUPERFAMILY SSF53901 4 361 4.05E-48 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27200 69058b4b91cd3f075f7c61637f7f52a0 366 PIRSF PIRSF000451 1 365 1.5E-104 T 23-04-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 SUPERFAMILY SSF46689 251 298 2.55E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 4.3E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 4.3E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 Pfam PF12833 Helix-turn-helix domain 220 297 6.7E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 Gene3D G3DSA:1.10.10.60 251 298 1.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 PANTHER PTHR11019 23 298 5.6E-34 T 23-04-2016 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 SMART SM00342 213 296 2.7E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02645 28bb19214f5e5dc1f744af3d0bf6b58f 298 PANTHER PTHR11019:SF50 23 298 5.6E-34 T 23-04-2016 NIAKO_RS32155 93d2684be23a8288681f33fbe6e7d2da 331 Pfam PF12146 Serine aminopeptidase, S33 143 267 2.3E-8 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS32155 93d2684be23a8288681f33fbe6e7d2da 331 PANTHER PTHR10992 73 264 4.1E-12 T 23-04-2016 NIAKO_RS32155 93d2684be23a8288681f33fbe6e7d2da 331 Gene3D G3DSA:3.40.50.1820 74 302 2.3E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS32155 93d2684be23a8288681f33fbe6e7d2da 331 SUPERFAMILY SSF53474 73 272 1.23E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS32155 93d2684be23a8288681f33fbe6e7d2da 331 PANTHER PTHR10992:SF732 73 264 4.1E-12 T 23-04-2016 NIAKO_RS09580 a0e500704c466f85e489d32e2b1dd2e4 248 Pfam PF01814 Hemerythrin HHE cation binding domain 86 238 1.4E-17 T 23-04-2016 IPR012312 Haemerythrin-like NIAKO_RS09580 a0e500704c466f85e489d32e2b1dd2e4 248 Gene3D G3DSA:1.20.120.520 90 240 5.9E-16 T 23-04-2016 NIAKO_RS09580 a0e500704c466f85e489d32e2b1dd2e4 248 PANTHER PTHR36438 4 248 5.6E-60 T 23-04-2016 NIAKO_RS09580 a0e500704c466f85e489d32e2b1dd2e4 248 Pfam PF04405 Domain of Unknown function (DUF542) 12 61 3.1E-15 T 23-04-2016 IPR019903 Repair of iron centres family NIAKO_RS09580 a0e500704c466f85e489d32e2b1dd2e4 248 PANTHER PTHR36438:SF1 4 248 5.6E-60 T 23-04-2016 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 302 7.9E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PRINTS PR01713 Nucleotide sugar epimerase signature 276 293 3.6E-16 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PRINTS PR01713 Nucleotide sugar epimerase signature 31 47 3.6E-16 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PRINTS PR01713 Nucleotide sugar epimerase signature 237 252 3.6E-16 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 3.6E-16 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 Gene3D G3DSA:3.90.25.10 197 313 7.1E-23 T 23-04-2016 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PANTHER PTHR10366 3 316 4.7E-117 T 23-04-2016 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 PANTHER PTHR10366:SF77 3 316 4.7E-117 T 23-04-2016 NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 Gene3D G3DSA:3.40.50.720 3 196 1.4E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11615 df1470ce876c4df4c877968a2ce3ba12 326 SUPERFAMILY SSF51735 1 317 4.96E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 Gene3D G3DSA:2.60.40.1120 17 112 4.2E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 SUPERFAMILY SSF49464 17 87 5.3E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 Gene3D G3DSA:2.170.130.10 127 217 1.7E-6 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 Gene3D G3DSA:2.40.170.20 218 773 2.9E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 Pfam PF14905 Outer membrane protein beta-barrel family 367 771 2.4E-96 T 23-04-2016 NIAKO_RS18675 33ad962233224824042dbe05d8b2bd53 797 SUPERFAMILY SSF56935 131 773 1.59E-50 T 23-04-2016 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 PANTHER PTHR32060:SF11 14 604 1.7E-130 T 23-04-2016 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 Pfam PF03572 Peptidase family S41 357 528 1.4E-49 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 Gene3D G3DSA:2.30.42.10 248 336 1.6E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 SUPERFAMILY SSF50156 245 324 1.79E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 SMART SM00245 327 530 8.3E-46 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 248 322 1.6E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 SUPERFAMILY SSF52096 351 534 2.65E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 SUPERFAMILY SSF52096 196 265 2.65E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 206 542 3.5E-82 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 PANTHER PTHR32060 14 604 1.7E-130 T 23-04-2016 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 SMART SM00228 247 326 6.2E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS15750 33a36a6c0327c22b0e80fd7a56cbe129 668 Gene3D G3DSA:3.90.226.10 337 578 9.6E-59 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 SUPERFAMILY SSF48179 193 290 6.12E-26 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 Gene3D G3DSA:3.40.50.720 7 195 1.0E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 PANTHER PTHR23309 12 290 2.8E-112 T 23-04-2016 NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 PIRSF PIRSF000105 7 290 1.1E-84 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 Gene3D G3DSA:1.10.1040.10 196 290 3.5E-25 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 SUPERFAMILY SSF51735 11 193 2.69E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 15 191 5.0E-59 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS32645 cda64c32f1a61529ed934472c4c9a965 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 290 6.5E-26 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 SUPERFAMILY SSF69318 55 411 4.45E-67 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 SUPERFAMILY SSF69318 448 510 4.45E-67 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 SUPERFAMILY SSF69318 986 1071 5.1E-5 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026 59 317 7.4E-24 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026 448 591 7.4E-24 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026 342 408 7.4E-24 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Gene3D G3DSA:2.130.10.130 60 136 9.2E-10 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Gene3D G3DSA:2.130.10.130 161 410 6.3E-30 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Gene3D G3DSA:2.130.10.130 453 512 6.3E-30 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Gene3D G3DSA:2.130.10.130 655 792 4.9E-14 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026:SF0 59 317 7.4E-24 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026:SF0 448 591 7.4E-24 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 PANTHER PTHR16026:SF0 342 408 7.4E-24 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 73 136 5.0E-15 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 780 852 4.5E-10 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 359 405 1.8E-6 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 260 322 3.6E-13 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 668 732 7.4E-8 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 Pfam PF07593 ASPIC and UnbV 534 590 5.1E-6 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 SUPERFAMILY SSF69318 451 521 1.83E-46 T 23-04-2016 NIAKO_RS29740 02213d5d335856fc1fa8ac78356d5311 1111 SUPERFAMILY SSF69318 639 905 1.83E-46 T 23-04-2016 NIAKO_RS15450 69073bd0f01788d714c696b9707fe6ee 970 SUPERFAMILY SSF52151 581 836 1.23E-11 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 Gene3D G3DSA:3.40.50.300 210 370 2.1E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 SMART SM00487 21 220 6.8E-65 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 SMART SM00490 256 337 3.7E-33 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 PANTHER PTHR24031:SF261 1 483 8.8E-186 T 23-04-2016 NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 Pfam PF03880 DbpA RNA binding domain 487 557 9.1E-15 T 23-04-2016 IPR005580 DbpA, RNA-binding domain NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 Pfam PF00270 DEAD/DEAH box helicase 26 192 3.9E-49 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 PANTHER PTHR24031 1 483 8.8E-186 T 23-04-2016 NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 Pfam PF00271 Helicase conserved C-terminal domain 234 337 1.9E-27 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 SUPERFAMILY SSF52540 71 354 3.95E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22115 70860bd69ac6ead8e3a7e3af70c97166 563 Gene3D G3DSA:3.40.50.300 3 209 1.5E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 214 5.9E-28 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 Gene3D G3DSA:3.40.50.720 1 243 4.0E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 PANTHER PTHR10366 281 331 4.9E-54 T 23-04-2016 NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 PANTHER PTHR10366 4 260 4.9E-54 T 23-04-2016 NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 Gene3D G3DSA:3.90.25.10 301 330 1.7E-8 T 23-04-2016 NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 SUPERFAMILY SSF51735 294 330 5.57E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06350 121eb53cf2a53bf0f21bef4f0a497231 331 SUPERFAMILY SSF51735 2 266 5.57E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25760 63538c2a2b20f4d5e943c1438feb5d3e 615 SUPERFAMILY SSF51905 399 455 4.75E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS25760 63538c2a2b20f4d5e943c1438feb5d3e 615 SUPERFAMILY SSF51905 17 177 4.75E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS25760 63538c2a2b20f4d5e943c1438feb5d3e 615 Pfam PF12831 FAD dependent oxidoreductase 25 468 2.3E-108 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS25760 63538c2a2b20f4d5e943c1438feb5d3e 615 Gene3D G3DSA:3.50.50.60 392 460 4.5E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS25760 63538c2a2b20f4d5e943c1438feb5d3e 615 Gene3D G3DSA:3.50.50.60 21 217 4.5E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 SMART SM01400 5 120 2.1E-67 T 23-04-2016 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 Gene3D G3DSA:3.40.50.2020 160 285 1.6E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 Gene3D G3DSA:3.40.50.2020 4 159 3.8E-63 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 120 2.8E-41 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 308 4.9E-23 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 SUPERFAMILY SSF53271 69 299 1.63E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 308 5.3E-107 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 PANTHER PTHR10210 6 314 2.8E-145 T 23-04-2016 NIAKO_RS00885 d7c00c6cecd9d49831a7703153c6628d 316 PANTHER PTHR10210:SF41 6 314 2.8E-145 T 23-04-2016 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Gene3D G3DSA:1.10.287.130 291 352 4.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PANTHER PTHR24423 295 523 1.3E-88 T 23-04-2016 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PANTHER PTHR24423 10 269 1.3E-88 T 23-04-2016 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SUPERFAMILY SSF55785 125 219 1.45E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Pfam PF13188 PAS domain 143 194 8.7E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Gene3D G3DSA:3.30.450.20 10 126 4.1E-19 T 23-04-2016 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 367 1.7E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Gene3D G3DSA:3.30.450.20 127 225 5.7E-11 T 23-04-2016 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SMART SM00387 411 521 3.6E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 518 3.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 5.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 5.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 5.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 5.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Pfam PF13426 PAS domain 25 128 1.7E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SUPERFAMILY SSF47384 284 368 1.33E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SUPERFAMILY SSF55874 357 517 6.81E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SMART SM00388 299 367 3.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SMART SM00091 13 79 3.5E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SMART SM00091 141 215 3.2 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 SUPERFAMILY SSF55785 25 138 5.58E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 Gene3D G3DSA:3.30.565.10 353 518 9.0E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36570 adce4f132983fa4a92ad214f7a2bc258 523 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 134 1.5E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 SUPERFAMILY SSF51419 65 314 4.67E-32 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 Gene3D G3DSA:2.40.37.10 296 440 5.5E-15 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 SUPERFAMILY SSF50621 286 443 1.97E-20 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 320 418 4.5E-12 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 70 313 3.6E-11 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 Gene3D G3DSA:3.20.20.10 53 295 1.5E-22 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 PANTHER PTHR11482 24 464 2.3E-40 T 23-04-2016 NIAKO_RS10750 9a95cb5480bb2542c8aac387defa5f0f 464 PANTHER PTHR11482:SF36 24 464 2.3E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 SUPERFAMILY SSF52833 6 183 8.29E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 PANTHER PTHR10681 1 182 3.6E-80 T 23-04-2016 NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 PIRSF PIRSF000239 1 189 2.2E-58 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 PANTHER PTHR10681:SF87 1 182 3.6E-80 T 23-04-2016 NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 Pfam PF00578 AhpC/TSA family 8 143 2.5E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS31265 4e1e4b6b29ccc1217ae7861f8365a6cd 189 Gene3D G3DSA:3.40.30.10 7 185 5.3E-64 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22600 51debcbf06eba201ec582e06740204ea 134 SUPERFAMILY SSF52172 9 129 4.27E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS22600 51debcbf06eba201ec582e06740204ea 134 Gene3D G3DSA:3.40.50.2300 5 130 7.3E-34 T 23-04-2016 NIAKO_RS22600 51debcbf06eba201ec582e06740204ea 134 PANTHER PTHR26402 11 129 8.9E-35 T 23-04-2016 NIAKO_RS22600 51debcbf06eba201ec582e06740204ea 134 SMART SM00448 11 124 4.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS22600 51debcbf06eba201ec582e06740204ea 134 Pfam PF00072 Response regulator receiver domain 13 123 1.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 Pfam PF07568 Histidine kinase 411 486 1.1E-26 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 SUPERFAMILY SSF48452 82 332 9.86E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 PANTHER PTHR24423 400 601 2.9E-22 T 23-04-2016 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 PANTHER PTHR24423 352 368 2.9E-22 T 23-04-2016 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 Pfam PF13424 Tetratricopeptide repeat 137 210 2.7E-9 T 23-04-2016 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 PANTHER PTHR24423:SF468 400 601 2.9E-22 T 23-04-2016 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 PANTHER PTHR24423:SF468 352 368 2.9E-22 T 23-04-2016 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 Gene3D G3DSA:3.30.565.10 464 602 1.7E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 601 8.0E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 SMART SM00028 138 171 17.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 SMART SM00028 178 211 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 Gene3D G3DSA:1.25.40.10 138 341 2.1E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36475 8b1fd2f324a92081c79ea4fd453e1dc3 604 SUPERFAMILY SSF55874 472 601 1.28E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 Gene3D G3DSA:3.30.1380.10 56 224 9.4E-58 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 57 234 27.158 T 23-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 PANTHER PTHR22935 40 236 4.1E-34 T 23-04-2016 NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 SUPERFAMILY SSF55166 57 224 7.32E-54 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 PANTHER PTHR22935:SF81 40 236 4.1E-34 T 23-04-2016 NIAKO_RS22080 6234a8c5676fedff1a93a0f36f26e4b8 240 Pfam PF01427 D-ala-D-ala dipeptidase 55 238 2.3E-29 T 23-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 Gene3D G3DSA:1.10.1740.10 28 102 7.6E-16 T 23-04-2016 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 SUPERFAMILY SSF88946 21 120 1.06E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 189 3.3E-19 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 SUPERFAMILY SSF88659 133 201 1.09E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 Pfam PF04542 Sigma-70 region 2 46 114 2.6E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 Gene3D G3DSA:1.10.3120.10 103 150 4.3E-4 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 PANTHER PTHR30173 14 174 1.5E-23 T 23-04-2016 NIAKO_RS14920 35a79aa86204f023e707145a7f093a76 214 Gene3D G3DSA:1.10.10.10 151 203 2.4E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11015 74b48509a2c1f62ac6303c8d231456ae 304 SUPERFAMILY SSF52047 85 285 4.12E-14 T 23-04-2016 NIAKO_RS11015 74b48509a2c1f62ac6303c8d231456ae 304 Gene3D G3DSA:3.80.10.10 44 299 2.6E-59 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF56935 504 836 1.47E-78 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF56935 992 1041 1.47E-78 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF56935 373 461 1.47E-78 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF56935 109 278 1.47E-78 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF56935 899 943 1.47E-78 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532:SF51 313 493 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532:SF51 25 195 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532:SF51 573 1082 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532:SF51 219 295 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 228 258 1.2E-13 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532 313 493 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532 25 195 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532 573 1082 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 PANTHER PTHR11532 219 295 1.5E-187 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Pfam PF13715 CarboxypepD_reg-like domain 32 112 2.8E-16 T 23-04-2016 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 252 1.1E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Gene3D G3DSA:2.170.130.10 115 255 2.6E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 SUPERFAMILY SSF49464 30 110 4.58E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Gene3D G3DSA:2.40.170.20 381 457 6.9E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Gene3D G3DSA:2.40.170.20 490 838 6.9E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Gene3D G3DSA:2.40.170.20 898 1019 6.9E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1084 2.3E-177 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS04060 7e6b356b3b688b089fba0cb4989c1bd5 1084 Gene3D G3DSA:2.60.40.1120 32 114 1.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 SUPERFAMILY SSF109998 218 266 4.32E-15 T 23-04-2016 IPR027304 Trigger factor/SurA domain NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 SUPERFAMILY SSF109998 46 152 4.32E-15 T 23-04-2016 IPR027304 Trigger factor/SurA domain NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 Gene3D G3DSA:3.10.50.40 343 464 3.7E-16 T 23-04-2016 NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 PANTHER PTHR10657 313 459 9.8E-14 T 23-04-2016 NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 PANTHER PTHR10657 4 178 9.8E-14 T 23-04-2016 NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 Pfam PF13623 SurA N-terminal domain 4 147 9.8E-36 T 23-04-2016 NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 SUPERFAMILY SSF54534 345 457 2.75E-11 T 23-04-2016 NIAKO_RS31220 d77ae6c8cf66bc015f6bc565b03602c2 716 Pfam PF13616 PPIC-type PPIASE domain 335 461 1.8E-19 T 23-04-2016 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 236 4.0E-34 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 SUPERFAMILY SSF53067 7 111 7.77E-13 T 23-04-2016 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 Pfam PF03309 Type III pantothenate kinase 7 195 5.4E-36 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 Gene3D G3DSA:3.30.420.40 85 243 7.0E-39 T 23-04-2016 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 SUPERFAMILY SSF53067 114 241 1.17E-30 T 23-04-2016 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 PANTHER PTHR34265 7 242 1.0E-47 T 23-04-2016 NIAKO_RS32220 83b83a689848a5b220f9ba86b1b8869c 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 5 243 20.549 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 Pfam PF08338 Domain of unknown function (DUF1731) 259 305 5.4E-15 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 SUPERFAMILY SSF51735 1 304 3.21E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 PANTHER PTHR11092:SF0 1 308 3.2E-96 T 23-04-2016 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 302 1.8E-89 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 Gene3D G3DSA:3.90.25.10 205 251 1.5E-7 T 23-04-2016 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 PANTHER PTHR11092 1 308 3.2E-96 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 132 1.4E-14 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 183 230 5.5E-5 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS36050 270cfe9e051829b4ae60f9e2e01b56ef 308 Gene3D G3DSA:3.40.50.720 1 204 7.0E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18740 99bab4155536a94dcfe5cf99a3c1e6f9 345 Pfam PF14292 SusE outer membrane protein 15 132 5.9E-20 T 23-04-2016 IPR025970 SusE outer membrane protein UniPathway: UPA00153 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 SUPERFAMILY SSF102114 21 338 3.14E-32 T 23-04-2016 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 Pfam PF13186 Iron-sulfur cluster-binding domain 282 339 3.7E-8 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 Gene3D G3DSA:3.20.20.70 22 342 4.2E-35 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 PANTHER PTHR11228:SF7 25 222 6.3E-23 T 23-04-2016 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 PANTHER PTHR11228:SF7 244 338 6.3E-23 T 23-04-2016 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 Pfam PF04055 Radical SAM superfamily 34 183 2.9E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 PANTHER PTHR11228 25 222 6.3E-23 T 23-04-2016 NIAKO_RS24300 8666a07edad41f5a22205edc30d64c1a 386 PANTHER PTHR11228 244 338 6.3E-23 T 23-04-2016 NIAKO_RS17990 da0ac96473bbf52f704fbf4387d37db9 424 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 100 375 0.004 T 23-04-2016 NIAKO_RS17990 da0ac96473bbf52f704fbf4387d37db9 424 PANTHER PTHR30268 14 417 1.6E-97 T 23-04-2016 NIAKO_RS17990 da0ac96473bbf52f704fbf4387d37db9 424 SUPERFAMILY SSF51658 43 404 3.98E-78 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS17990 da0ac96473bbf52f704fbf4387d37db9 424 Gene3D G3DSA:3.20.20.150 43 411 1.3E-76 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS18880 e078507107453fe80ef633fc6a1e61fa 136 Pfam PF13564 DoxX-like family 13 92 1.1E-8 T 23-04-2016 IPR032808 DoxX family NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 SMART SM01390 3 92 1.8E-43 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 3.3E-26 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 SMART SM00363 93 149 5.5E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 SUPERFAMILY SSF55174 3 201 7.72E-59 T 23-04-2016 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 PANTHER PTHR11831 1 201 1.1E-75 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 Gene3D G3DSA:3.10.290.10 100 186 4.3E-27 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 4.5E-72 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 33.133 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 PANTHER PTHR11831:SF4 1 201 1.1E-75 T 23-04-2016 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 Gene3D G3DSA:1.10.1050.10 1 99 1.5E-37 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NIAKO_RS21855 fb59e8e90aed15857666127133be8f8e 201 Pfam PF01479 S4 domain 94 140 2.0E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS01955 b801c874e562fbe1d750ec6415cc17bd 273 SUPERFAMILY SSF53474 9 268 1.14E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01955 b801c874e562fbe1d750ec6415cc17bd 273 Pfam PF00756 Putative esterase 18 262 3.7E-26 T 23-04-2016 IPR000801 Putative esterase NIAKO_RS01955 b801c874e562fbe1d750ec6415cc17bd 273 PANTHER PTHR10907 11 209 7.7E-18 T 23-04-2016 NIAKO_RS01955 b801c874e562fbe1d750ec6415cc17bd 273 Gene3D G3DSA:3.40.50.1820 10 269 4.3E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01955 b801c874e562fbe1d750ec6415cc17bd 273 PANTHER PTHR10907:SF33 11 209 7.7E-18 T 23-04-2016 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Pfam PF05426 Alginate lyase 84 338 5.0E-5 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Gene3D G3DSA:2.60.120.260 490 641 1.4E-15 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SUPERFAMILY SSF49373 673 722 2.59E-5 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SUPERFAMILY SSF49785 491 641 2.38E-15 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SUPERFAMILY SSF48230 291 352 6.5E-32 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SUPERFAMILY SSF48230 26 243 6.5E-32 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Gene3D G3DSA:1.50.10.110 5 237 2.2E-23 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Gene3D G3DSA:1.50.10.110 285 335 2.2E-23 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1652 1724 2.3E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SUPERFAMILY SSF49373 1344 1382 4.16E-5 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Gene3D G3DSA:2.60.40.1080 672 722 1.1E-6 T 23-04-2016 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 Gene3D G3DSA:2.60.40.1080 1344 1378 3.3E-7 T 23-04-2016 NIAKO_RS37510 65912d86dd99301ff08efdd34a054391 1726 SMART SM00606 488 643 4.7E-4 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 79 276 5.8E-62 T 23-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 SUPERFAMILY SSF47240 4 270 2.97E-74 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 PANTHER PTHR30458 76 276 9.6E-101 T 23-04-2016 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 PANTHER PTHR30458 6 59 9.6E-101 T 23-04-2016 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 PIRSF PIRSF037834 1 276 2.5E-95 T 23-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 Pfam PF05138 Phenylacetic acid catabolic protein 3 276 1.4E-92 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 PANTHER PTHR30458:SF1 76 276 9.6E-101 T 23-04-2016 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 PANTHER PTHR30458:SF1 6 59 9.6E-101 T 23-04-2016 NIAKO_RS30540 e12cf4196e7cc48a94a637bb209719f1 276 Gene3D G3DSA:1.20.1260.10 3 276 5.0E-94 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Pfam PF01979 Amidohydrolase family 86 449 4.0E-21 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 SUPERFAMILY SSF51338 428 451 1.34E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 SUPERFAMILY SSF51338 32 90 1.34E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 SUPERFAMILY SSF54427 472 580 2.32E-22 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 SUPERFAMILY SSF51556 89 306 3.94E-49 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 SUPERFAMILY SSF51556 357 429 3.94E-49 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 PANTHER PTHR11271 40 323 1.2E-38 T 23-04-2016 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 PANTHER PTHR11271 357 446 1.2E-38 T 23-04-2016 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Gene3D G3DSA:2.30.40.10 29 91 2.8E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Gene3D G3DSA:2.30.40.10 438 468 2.8E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Gene3D G3DSA:3.20.20.140 411 437 5.2E-7 T 23-04-2016 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Gene3D G3DSA:3.10.450.50 475 579 4.0E-11 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Pfam PF12680 SnoaL-like domain 479 575 1.5E-10 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 Gene3D G3DSA:3.20.20.140 92 410 2.4E-53 T 23-04-2016 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 PANTHER PTHR11271:SF33 40 323 1.2E-38 T 23-04-2016 NIAKO_RS21335 6d41cf5b6d6fcf84cb9e43c57fadf69c 581 PANTHER PTHR11271:SF33 357 446 1.2E-38 T 23-04-2016 NIAKO_RS19780 67d4550927b14e30a1709fc5c5286519 131 SUPERFAMILY SSF54427 20 118 4.9E-14 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS19780 67d4550927b14e30a1709fc5c5286519 131 Pfam PF12680 SnoaL-like domain 24 119 8.4E-8 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS19780 67d4550927b14e30a1709fc5c5286519 131 Gene3D G3DSA:3.10.450.50 20 120 8.6E-9 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 PANTHER PTHR33619 48 76 7.7E-28 T 23-04-2016 NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 PANTHER PTHR33619 107 271 7.7E-28 T 23-04-2016 NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 Pfam PF02563 Polysaccharide biosynthesis/export protein 53 152 1.3E-12 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 Pfam PF10531 SLBB domain 159 205 8.2E-8 T 23-04-2016 IPR019554 Soluble ligand binding domain NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 Gene3D G3DSA:3.10.560.10 157 240 1.1E-16 T 23-04-2016 NIAKO_RS26330 dea00369b5e49c7cd2aa3672587fcc68 276 Gene3D G3DSA:3.30.1950.10 59 156 1.1E-13 T 23-04-2016 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 SMART SM00861 352 528 1.5E-41 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 PANTHER PTHR11624 1 304 5.3E-112 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 PANTHER PTHR11624 339 687 5.3E-112 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 SUPERFAMILY SSF52518 5 338 2.17E-50 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Pfam PF00676 Dehydrogenase E1 component 25 324 2.9E-36 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 6.6E-33 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 SUPERFAMILY SSF52922 544 686 3.43E-24 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Gene3D G3DSA:3.40.50.920 564 683 1.3E-25 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Gene3D G3DSA:3.40.50.970 3 341 4.2E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Gene3D G3DSA:3.40.50.970 351 552 2.5E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 SUPERFAMILY SSF52518 352 555 3.53E-48 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 PANTHER PTHR11624:SF21 1 304 5.3E-112 T 23-04-2016 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 PANTHER PTHR11624:SF21 339 687 5.3E-112 T 23-04-2016 NIAKO_RS00910 c17dac6d809667b370e3beca99ac0fe3 688 Pfam PF02780 Transketolase, C-terminal domain 565 678 1.0E-18 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 Pfam PF08534 Redoxin 260 391 7.8E-13 T 23-04-2016 IPR013740 Redoxin GO:0016491 NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 SUPERFAMILY SSF52833 250 417 1.03E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 PANTHER PTHR10681:SF125 266 390 7.8E-14 T 23-04-2016 NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 Gene3D G3DSA:3.40.30.10 3 29 4.2E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 Gene3D G3DSA:3.40.30.10 250 417 4.2E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15125 fdc8302b33e72c243339154e90a4a859 418 PANTHER PTHR10681 266 390 7.8E-14 T 23-04-2016 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 PANTHER PTHR15184 334 510 1.7E-286 T 23-04-2016 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 PANTHER PTHR15184 1 315 1.7E-286 T 23-04-2016 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 396 515 1.6E-39 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Gene3D G3DSA:2.40.30.20 3 94 2.2E-38 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Gene3D G3DSA:1.20.150.20 397 519 3.2E-39 T 23-04-2016 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 PIRSF PIRSF039088 2 526 1.4E-242 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 515 2.6E-235 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 SUPERFAMILY SSF47917 397 515 2.28E-35 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 380 389 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 389 3.1E-71 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 2.3E-18 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 PANTHER PTHR15184:SF3 334 510 1.7E-286 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 PANTHER PTHR15184:SF3 1 315 1.7E-286 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 SUPERFAMILY SSF50615 11 95 2.16E-28 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Gene3D G3DSA:3.40.50.300 96 396 4.0E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 525 48.737 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS34005 f4372f58c086d8b9d589fc7f6d469093 526 SUPERFAMILY SSF52540 97 395 9.63E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09425 ac1c6544f3104a9bb1b7fd4ad9d088d2 496 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 223 1.6E-26 T 23-04-2016 NIAKO_RS09425 ac1c6544f3104a9bb1b7fd4ad9d088d2 496 PANTHER PTHR33908:SF1 5 413 5.0E-40 T 23-04-2016 NIAKO_RS09425 ac1c6544f3104a9bb1b7fd4ad9d088d2 496 PANTHER PTHR33908 5 413 5.0E-40 T 23-04-2016 NIAKO_RS27995 991790d9950983f15d9172ab620498c1 248 Pfam PF10677 Protein of unknown function (DUF2490) 28 231 1.0E-27 T 23-04-2016 IPR019619 Protein of unknown function DUF2490 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 Gene3D G3DSA:3.40.50.1820 52 335 1.1E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 99 110 8.6E-10 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 144 158 8.6E-10 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 71 79 8.6E-10 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PANTHER PTHR10992 267 335 4.7E-31 T 23-04-2016 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PANTHER PTHR10992 52 247 4.7E-31 T 23-04-2016 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 PIRSF PIRSF005539 40 340 1.0E-100 T 23-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 51 334 6.4E-110 T 23-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 SUPERFAMILY SSF53474 52 334 2.66E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19905 b55a3e0d6274cca9bf326a31cabba4cf 340 Pfam PF00561 alpha/beta hydrolase fold 71 317 2.3E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55781 519 691 7.85E-18 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55874 917 1045 1.57E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 701 828 5.1E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 285 402 8.6E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 419 530 1.3E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55785 710 823 1.34E-21 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF13188 PAS domain 141 211 0.007 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.40 523 694 2.0E-13 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 957 1045 1.8E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.20 411 522 1.8E-16 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55785 406 522 2.65E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF13185 GAF domain 546 690 3.0E-10 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 PANTHER PTHR24423 701 1046 5.5E-36 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 PANTHER PTHR24423 520 539 5.5E-36 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 PANTHER PTHR24423 253 391 5.5E-36 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF07730 Histidine kinase 850 911 2.6E-8 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.20 22 70 5.6E-4 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00091 703 771 0.08 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00091 419 485 7.6E-4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00091 7 73 9.4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00091 281 347 0.032 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.20 133 271 1.5E-8 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.20 695 830 3.3E-33 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF08448 PAS fold 426 525 2.5E-7 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.450.20 274 394 2.9E-15 T 23-04-2016 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55785 292 402 1.23E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF13426 PAS domain 292 395 2.7E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF13426 PAS domain 23 89 0.58 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Gene3D G3DSA:3.30.565.10 918 1046 3.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SUPERFAMILY SSF55785 129 267 2.66E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 Pfam PF08447 PAS fold 726 814 2.6E-18 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00065 547 699 9.2E-9 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00086 353 396 5.0 T 23-04-2016 IPR001610 PAC motif NIAKO_RS30010 4a78f868f6d0a68c7d5083fcd543e18c 1049 SMART SM00086 779 821 3.5E-6 T 23-04-2016 IPR001610 PAC motif NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Pfam PF13715 CarboxypepD_reg-like domain 30 111 5.2E-12 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532:SF57 1 192 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532:SF57 522 1059 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532:SF57 408 444 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532:SF57 212 376 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF56935 968 1061 3.34E-85 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF56935 886 930 3.34E-85 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF56935 108 269 3.34E-85 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF56935 447 796 3.34E-85 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF56935 322 410 3.34E-85 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532 1 192 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532 522 1059 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532 408 444 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 PANTHER PTHR11532 212 376 1.1E-251 T 23-04-2016 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.170.130.10 119 248 3.4E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 SUPERFAMILY SSF49464 29 118 2.35E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 221 251 1.4E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.60.40.1120 29 117 1.7E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.40.170.20 958 1061 6.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.40.170.20 895 920 6.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.40.170.20 331 395 6.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.40.170.20 249 265 6.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Gene3D G3DSA:2.40.170.20 428 815 6.0E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 1061 1.4E-254 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS21560 afe0d33763c2a1563544ef9edd681842 1061 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 245 5.4E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33670 54ef79a392556dff1d64e1ea6805c891 167 PANTHER PTHR34848 1 167 9.9E-52 T 23-04-2016 NIAKO_RS33670 54ef79a392556dff1d64e1ea6805c891 167 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 2 165 4.7E-53 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 NIAKO_RS33670 54ef79a392556dff1d64e1ea6805c891 167 Gene3D G3DSA:3.40.50.300 1 166 2.2E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33670 54ef79a392556dff1d64e1ea6805c891 167 PIRSF PIRSF006135 1 167 2.8E-51 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 NIAKO_RS33670 54ef79a392556dff1d64e1ea6805c891 167 SUPERFAMILY SSF52540 1 166 4.26E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 PANTHER PTHR34606:SF2 7 218 2.1E-43 T 23-04-2016 NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 PANTHER PTHR34606 7 218 2.1E-43 T 23-04-2016 NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 SMART SM00749 154 217 8.7E-6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 SMART SM00749 8 71 1.4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 SMART SM00749 83 146 43.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 Pfam PF04972 BON domain 151 215 8.2E-12 T 23-04-2016 IPR007055 BON domain NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 Pfam PF04972 BON domain 4 70 4.5E-17 T 23-04-2016 IPR007055 BON domain NIAKO_RS09215 b89242b2d8f406f210a8220bd62486f2 221 Pfam PF04972 BON domain 78 146 2.6E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 SMART SM00382 32 212 1.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 Pfam PF00005 ABC transporter 23 164 8.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 PANTHER PTHR24220 5 227 4.9E-114 T 23-04-2016 NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 SUPERFAMILY SSF52540 5 232 9.84E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 Gene3D G3DSA:3.40.50.300 4 232 2.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21920 be5624e34efee1d5d3bccb2c758e1df7 306 PANTHER PTHR24220:SF0 5 227 4.9E-114 T 23-04-2016 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 PANTHER PTHR30173 5 278 4.4E-55 T 23-04-2016 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 Pfam PF04542 Sigma-70 region 2 3 64 1.4E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 Gene3D G3DSA:3.10.450.50 164 274 3.8E-7 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 Pfam PF08281 Sigma-70, region 4 98 146 7.5E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 Gene3D G3DSA:1.10.1740.10 3 85 5.8E-9 T 23-04-2016 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 Gene3D G3DSA:1.10.10.10 98 150 2.0E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 SUPERFAMILY SSF54427 162 274 7.26E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 PANTHER PTHR30173:SF25 5 278 4.4E-55 T 23-04-2016 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 SUPERFAMILY SSF88659 93 149 1.72E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 1.2E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12600 a7bc942a6a4be1d38623e049c19ab667 280 SUPERFAMILY SSF88946 2 68 1.06E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15715 c5d5c45e538902d0d2c8197452ce82db 304 PANTHER PTHR10188:SF24 4 304 1.7E-127 T 23-04-2016 NIAKO_RS15715 c5d5c45e538902d0d2c8197452ce82db 304 PANTHER PTHR10188 4 304 1.7E-127 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 NIAKO_RS15715 c5d5c45e538902d0d2c8197452ce82db 304 SUPERFAMILY SSF56235 5 301 2.83E-97 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS15715 c5d5c45e538902d0d2c8197452ce82db 304 Pfam PF01112 Asparaginase 6 300 6.4E-114 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 NIAKO_RS20010 a78018d00100bcb4c4d9b9f975d2c933 134 Gene3D G3DSA:3.10.180.10 12 132 1.9E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS20010 a78018d00100bcb4c4d9b9f975d2c933 134 SUPERFAMILY SSF54593 9 131 9.4E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS20010 a78018d00100bcb4c4d9b9f975d2c933 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 128 5.5E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS09025 20f1cc768e907a7c63a223c9d3b41b25 480 PANTHER PTHR33307:SF1 27 333 3.9E-62 T 23-04-2016 NIAKO_RS09025 20f1cc768e907a7c63a223c9d3b41b25 480 Pfam PF07632 Protein of unknown function (DUF1593) 32 299 3.7E-79 T 23-04-2016 IPR011483 Protein of unknown function DUF1593 NIAKO_RS09025 20f1cc768e907a7c63a223c9d3b41b25 480 PANTHER PTHR33307 27 333 3.9E-62 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Gene3D G3DSA:2.60.40.10 358 472 5.8E-17 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 PANTHER PTHR24960 4 394 1.1E-63 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Gene3D G3DSA:3.30.70.20 282 317 9.4E-6 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 PANTHER PTHR24960:SF45 4 394 1.1E-63 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 273 284 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Pfam PF12801 4Fe-4S binding domain 97 134 3.1E-13 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Pfam PF13746 4Fe-4S dicluster domain 223 326 6.1E-38 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 472 1.6E-19 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 SUPERFAMILY SSF54862 108 129 4.37E-24 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 SUPERFAMILY SSF54862 170 336 4.37E-24 T 23-04-2016 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 46 464 1.2E-119 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 NIAKO_RS09560 3f6b2f4ccd0ecb6226e3191f46a53c42 475 Gene3D G3DSA:1.10.1060.10 227 281 1.6E-9 T 23-04-2016 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Gene3D G3DSA:3.90.226.10 445 533 4.9E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Gene3D G3DSA:3.90.226.10 200 284 4.3E-48 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Gene3D G3DSA:3.90.226.10 20 157 4.3E-48 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Gene3D G3DSA:3.90.226.10 295 406 4.9E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 301 516 8.4E-51 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Pfam PF01343 Peptidase family S49 121 270 2.7E-27 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 Pfam PF01343 Peptidase family S49 367 518 3.5E-44 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 SUPERFAMILY SSF52096 444 505 3.98E-37 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 SUPERFAMILY SSF52096 297 414 3.98E-37 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 SUPERFAMILY SSF52096 46 259 8.15E-19 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 PANTHER PTHR33209 7 529 1.0E-154 T 23-04-2016 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 12 543 9.0E-131 T 23-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 PIRSF PIRSF001217 1 578 1.6E-171 T 23-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 NIAKO_RS04640 536dcdb62b2e1b6eeb25c6c037784907 585 PANTHER PTHR33209:SF1 7 529 1.0E-154 T 23-04-2016 NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 PANTHER PTHR11070 6 505 3.5E-43 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 SUPERFAMILY SSF52540 154 491 1.48E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 SUPERFAMILY SSF52540 7 122 1.48E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Gene3D G3DSA:3.40.50.300 413 490 1.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Gene3D G3DSA:3.40.50.300 263 308 1.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Gene3D G3DSA:3.40.50.300 369 375 1.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Pfam PF13361 UvrD-like helicase C-terminal domain 368 489 7.2E-14 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Gene3D G3DSA:3.40.50.300 5 98 1.3E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Gene3D G3DSA:3.40.50.300 177 262 1.3E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01375 ebd1fe6bc48b46fcc3d04e6277d2a218 604 Pfam PF00580 UvrD/REP helicase N-terminal domain 195 246 1.3E-6 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 PANTHER PTHR39323 6 217 1.4E-29 T 23-04-2016 NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 SUPERFAMILY SSF56300 28 189 8.55E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 Gene3D G3DSA:3.60.21.10 28 130 5.9E-13 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 PANTHER PTHR39323:SF1 6 217 1.4E-29 T 23-04-2016 NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 PIRSF PIRSF000887 8 213 7.5E-40 T 23-04-2016 IPR024173 Phosphoesterase, MJ0037 NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 9 215 1.9E-65 T 23-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated NIAKO_RS25045 2091621b380c38dc53d435b8d4511db4 218 Pfam PF00149 Calcineurin-like phosphoesterase 30 117 2.6E-7 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS05295 661702e5ffab8ecabe64964400846498 88 Gene3D G3DSA:1.10.443.10 10 85 4.8E-18 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS05295 661702e5ffab8ecabe64964400846498 88 Pfam PF00589 Phage integrase family 8 72 1.7E-12 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS05295 661702e5ffab8ecabe64964400846498 88 PANTHER PTHR30349 5 88 2.1E-32 T 23-04-2016 NIAKO_RS05295 661702e5ffab8ecabe64964400846498 88 PANTHER PTHR30349:SF26 5 88 2.1E-32 T 23-04-2016 NIAKO_RS05295 661702e5ffab8ecabe64964400846498 88 SUPERFAMILY SSF56349 3 82 3.24E-17 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS05710 15a6815c3ff78127a7ecfcdf9d9aa9a6 271 Gene3D G3DSA:3.40.50.150 37 230 1.1E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05710 15a6815c3ff78127a7ecfcdf9d9aa9a6 271 SUPERFAMILY SSF53335 7 226 7.9E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05710 15a6815c3ff78127a7ecfcdf9d9aa9a6 271 PANTHER PTHR10108 52 211 8.8E-29 T 23-04-2016 NIAKO_RS05710 15a6815c3ff78127a7ecfcdf9d9aa9a6 271 PANTHER PTHR10108:SF878 52 211 8.8E-29 T 23-04-2016 NIAKO_RS05710 15a6815c3ff78127a7ecfcdf9d9aa9a6 271 Pfam PF13847 Methyltransferase domain 60 168 5.2E-19 T 23-04-2016 IPR025714 Methyltransferase domain NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Gene3D G3DSA:2.60.40.10 43 91 1.5E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Gene3D G3DSA:2.60.40.10 284 364 6.6E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Gene3D G3DSA:2.60.40.10 113 189 2.0E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SUPERFAMILY SSF81296 371 461 2.33E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SUPERFAMILY SSF81296 114 195 3.73E-11 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SUPERFAMILY SSF81296 202 271 1.05E-10 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SUPERFAMILY SSF81296 39 100 6.69E-5 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Pfam PF01833 IPT/TIG domain 202 272 2.6E-12 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Pfam PF01833 IPT/TIG domain 286 362 2.4E-4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Pfam PF01833 IPT/TIG domain 372 461 6.4E-7 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Pfam PF01833 IPT/TIG domain 39 90 2.7E-4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Pfam PF01833 IPT/TIG domain 115 194 3.0E-9 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Gene3D G3DSA:2.60.40.10 202 281 2.6E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 Gene3D G3DSA:2.60.40.10 371 462 4.8E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SMART SM00429 371 462 2.4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SMART SM00429 201 284 0.016 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS02980 90bc7eb01917501f8a4ff9e839c8cf57 463 SUPERFAMILY SSF81296 285 367 1.54E-7 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 PANTHER PTHR26402:SF501 1 139 7.1E-19 T 23-04-2016 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 Pfam PF00072 Response regulator receiver domain 3 111 2.1E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 Gene3D G3DSA:3.40.50.2300 1 123 4.8E-20 T 23-04-2016 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 SMART SM00850 153 253 2.9E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 PANTHER PTHR26402 1 139 7.1E-19 T 23-04-2016 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 Pfam PF04397 LytTr DNA-binding domain 154 252 1.2E-13 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 SUPERFAMILY SSF52172 1 136 8.54E-20 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 Gene3D G3DSA:2.40.50.40 144 211 1.9E-6 T 23-04-2016 NIAKO_RS12750 f48fabedbd4601b5708651ba6a1fa1c0 256 SMART SM00448 1 111 5.5E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS24750 75de5553a01b348681bdbe548b488264 575 Gene3D G3DSA:3.40.630.10 27 312 1.4E-25 T 23-04-2016 NIAKO_RS24750 75de5553a01b348681bdbe548b488264 575 Pfam PF00246 Zinc carboxypeptidase 39 174 2.4E-10 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NIAKO_RS24750 75de5553a01b348681bdbe548b488264 575 PANTHER PTHR11705:SF82 13 352 9.9E-31 T 23-04-2016 NIAKO_RS24750 75de5553a01b348681bdbe548b488264 575 PANTHER PTHR11705 13 352 9.9E-31 T 23-04-2016 NIAKO_RS24750 75de5553a01b348681bdbe548b488264 575 SUPERFAMILY SSF53187 34 297 9.59E-34 T 23-04-2016 NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 Gene3D G3DSA:3.60.21.10 27 229 1.1E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 Gene3D G3DSA:3.60.21.10 276 350 1.1E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 SUPERFAMILY SSF56300 276 343 1.21E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 SUPERFAMILY SSF56300 27 229 1.21E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 Pfam PF00149 Calcineurin-like phosphoesterase 27 218 1.0E-5 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS32710 34e2b376d96abe64e785309a5326cb55 1216 Pfam PF01103 Surface antigen 956 1173 6.1E-10 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS22150 3d3e91ac01c7d73b2520264a39875563 282 PANTHER PTHR12862 69 206 1.1E-13 T 23-04-2016 NIAKO_RS22150 3d3e91ac01c7d73b2520264a39875563 282 SUPERFAMILY SSF53067 3 106 2.63E-20 T 23-04-2016 NIAKO_RS22150 3d3e91ac01c7d73b2520264a39875563 282 SUPERFAMILY SSF53067 111 281 1.55E-36 T 23-04-2016 NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 Pfam PF00999 Sodium/hydrogen exchanger family 11 387 1.0E-66 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 PANTHER PTHR16254:SF6 1 573 3.3E-217 T 23-04-2016 NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 SUPERFAMILY SSF51735 418 542 3.48E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 299 2.5E-79 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 Gene3D G3DSA:3.40.50.720 414 543 1.3E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 PANTHER PTHR16254 1 573 3.3E-217 T 23-04-2016 NIAKO_RS20520 6b73db25c4f141f7abb001c236e3c674 633 Pfam PF02254 TrkA-N domain 419 528 3.5E-19 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 SUPERFAMILY SSF48498 78 192 3.34E-22 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 PANTHER PTHR30055:SF44 1 194 3.5E-42 T 23-04-2016 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 4.6E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 79 164 3.0E-6 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 SUPERFAMILY SSF46689 4 81 7.18E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 Gene3D G3DSA:1.10.357.10 12 192 1.1E-38 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS17330 7b9a9b25394cf9f08c434d01656d4c66 194 PANTHER PTHR30055 1 194 3.5E-42 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF56935 982 1029 5.49E-47 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF56935 804 918 5.49E-47 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF56935 711 755 5.49E-47 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF56935 354 667 5.49E-47 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF56935 108 308 5.49E-47 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 SUPERFAMILY SSF49464 28 123 2.12E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 PANTHER PTHR30069:SF6 1 1027 8.2E-116 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Gene3D G3DSA:2.40.170.20 980 1030 2.4E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Gene3D G3DSA:2.40.170.20 334 913 2.4E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Gene3D G3DSA:2.40.170.20 240 301 2.4E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Gene3D G3DSA:2.60.40.1120 28 126 3.5E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Gene3D G3DSA:2.170.130.10 164 239 5.6E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 108 6.4E-19 T 23-04-2016 NIAKO_RS01965 9ddf62b8b992045a0f7190c0d1f9cf49 1100 PANTHER PTHR30069 1 1027 8.2E-116 T 23-04-2016 NIAKO_RS35430 4703cbc13f8ca2c36f2f41fad336681a 1663 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1269 1358 1.6E-13 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Gene3D G3DSA:2.40.170.20 634 847 8.3E-41 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Gene3D G3DSA:2.40.170.20 165 242 8.3E-41 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Gene3D G3DSA:2.40.170.20 364 591 8.3E-41 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Gene3D G3DSA:2.40.170.20 290 325 8.3E-41 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Pfam PF00593 TonB dependent receptor 535 846 5.0E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 SUPERFAMILY SSF56935 629 847 1.16E-65 T 23-04-2016 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 SUPERFAMILY SSF56935 291 564 1.16E-65 T 23-04-2016 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 SUPERFAMILY SSF56935 35 230 1.16E-65 T 23-04-2016 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Gene3D G3DSA:2.170.130.10 34 164 2.1E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25620 27f80c48176116e17c18171d9238903a 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 5.6E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32550 cedba19b50d35679b36da917e87a7331 332 Gene3D G3DSA:3.40.630.10 46 322 2.6E-55 T 23-04-2016 NIAKO_RS32550 cedba19b50d35679b36da917e87a7331 332 Pfam PF04389 Peptidase family M28 117 310 1.4E-44 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS32550 cedba19b50d35679b36da917e87a7331 332 PANTHER PTHR12147 50 317 5.5E-38 T 23-04-2016 NIAKO_RS32550 cedba19b50d35679b36da917e87a7331 332 SUPERFAMILY SSF53187 51 320 2.1E-54 T 23-04-2016 NIAKO_RS07775 26d9ccda4901a6307fb8c5094550f25a 265 PANTHER PTHR10992:SF771 22 265 1.0E-31 T 23-04-2016 NIAKO_RS07775 26d9ccda4901a6307fb8c5094550f25a 265 Gene3D G3DSA:3.40.50.1820 26 263 4.4E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07775 26d9ccda4901a6307fb8c5094550f25a 265 Pfam PF00561 alpha/beta hydrolase fold 46 159 3.8E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07775 26d9ccda4901a6307fb8c5094550f25a 265 SUPERFAMILY SSF53474 24 263 2.03E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07775 26d9ccda4901a6307fb8c5094550f25a 265 PANTHER PTHR10992 22 265 1.0E-31 T 23-04-2016 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 PANTHER PTHR11731:SF110 102 702 2.7E-160 T 23-04-2016 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 SUPERFAMILY SSF82171 70 423 9.94E-45 T 23-04-2016 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 PANTHER PTHR11731 102 702 2.7E-160 T 23-04-2016 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 Gene3D G3DSA:3.40.50.1820 441 681 9.6E-75 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 Gene3D G3DSA:2.140.10.30 52 421 5.5E-86 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 SUPERFAMILY SSF53474 437 686 4.09E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 98 405 4.4E-74 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS28135 ff3a24bfd07ec6ca1a7629e99708af73 704 Pfam PF00326 Prolyl oligopeptidase family 492 686 9.6E-47 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 Hamap MF_00361 NAD kinase [nadK]. 1 286 27.07 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 Pfam PF01513 ATP-NAD kinase 63 259 9.7E-43 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 Gene3D G3DSA:2.60.200.30 154 250 3.8E-36 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 Gene3D G3DSA:3.40.50.10330 1 153 1.4E-25 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 SUPERFAMILY SSF111331 2 289 3.27E-67 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain NIAKO_RS32430 3439255a54ca4c6586526eac217fa73d 292 PANTHER PTHR20275 13 288 6.3E-61 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 580 647 2.7E-20 T 23-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Gene3D G3DSA:1.50.10.10 693 1070 7.4E-139 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Gene3D G3DSA:2.70.98.10 335 572 2.7E-80 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Gene3D G3DSA:2.60.220.10 573 678 2.1E-26 T 23-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 SUPERFAMILY SSF74650 323 571 4.34E-75 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Gene3D G3DSA:1.50.10.100 39 334 3.8E-69 T 23-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 SUPERFAMILY SSF48230 38 333 1.7E-65 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Pfam PF07470 Glycosyl Hydrolase Family 88 727 1069 1.2E-21 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 46 289 3.9E-52 T 23-04-2016 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 SUPERFAMILY SSF48208 696 1071 1.33E-101 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 PANTHER PTHR38481 49 705 2.9E-96 T 23-04-2016 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 PANTHER PTHR38481:SF1 49 705 2.9E-96 T 23-04-2016 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 SUPERFAMILY SSF49863 579 678 1.71E-21 T 23-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 NIAKO_RS36770 ccd3669f04dc072fe885c0cd3006c48c 1073 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 324 568 5.1E-78 T 23-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SMART SM00448 1175 1288 8.4E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1115 1128 4.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1051 1065 4.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1069 1079 4.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1085 1103 4.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF12833 Helix-turn-helix domain 1353 1431 2.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SMART SM00388 901 967 7.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF47384 890 967 9.02E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF52172 1174 1304 1.28E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF46689 1382 1434 2.2E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF63829 91 257 1.81E-13 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1014 1130 1.2E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 902 967 3.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SMART SM00387 1013 1131 2.8E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423:SF487 83 184 1.5E-112 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423:SF487 844 1338 1.5E-112 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423:SF487 274 338 1.5E-112 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF00072 Response regulator receiver domain 1178 1285 1.9E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 85 211 4.3E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 418 482 3.0E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 289 390 4.2E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 483 575 3.4E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 221 288 3.9E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF55874 957 1129 1.19E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF63829 272 454 3.01E-11 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SUPERFAMILY SSF63829 471 715 1.54E-22 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:1.10.287.130 894 953 4.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:3.30.565.10 954 1131 1.7E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:1.10.10.60 1382 1431 6.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 SMART SM00342 1346 1431 7.4E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1383 1427 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:2.120.10.30 576 685 4.1E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07495 Y_Y_Y domain 784 846 4.8E-18 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 510 532 0.0015 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 183 204 1.4E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 649 672 2.9E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 227 246 0.0069 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 606 628 2.9E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 89 112 0.0037 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 272 294 3.6E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 367 388 3.1E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 463 485 6.8E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Pfam PF07494 Two component regulator propeller 137 157 0.0057 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 Gene3D G3DSA:3.40.50.2300 1174 1301 1.2E-33 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423 83 184 1.5E-112 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423 844 1338 1.5E-112 T 23-04-2016 NIAKO_RS14680 8dc4ac239f908efd4e2386f8116fc9fc 1447 PANTHER PTHR24423 274 338 1.5E-112 T 23-04-2016 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 PANTHER PTHR11019:SF61 6 115 1.0E-24 T 23-04-2016 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 SUPERFAMILY SSF46689 61 112 6.27E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 Pfam PF12833 Helix-turn-helix domain 31 108 3.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 Gene3D G3DSA:1.10.10.60 62 109 2.9E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 PANTHER PTHR11019 6 115 1.0E-24 T 23-04-2016 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 SMART SM00342 25 107 3.2E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 103 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20180 73700b2fa0675a1e4c7b73bfcb0781c7 120 Gene3D G3DSA:1.10.10.60 7 61 2.4E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 SMART SM00481 5 79 1.0E-26 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 327 773 1.7E-162 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 Pfam PF14579 Helix-hairpin-helix motif 846 936 1.2E-25 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 Gene3D G3DSA:3.20.20.140 4 282 6.1E-48 T 23-04-2016 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 PANTHER PTHR32294 1 1174 0.0 T 23-04-2016 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 PANTHER PTHR32294:SF0 1 1174 0.0 T 23-04-2016 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 Pfam PF02811 PHP domain 6 186 7.7E-47 T 23-04-2016 IPR004013 PHP domain GO:0003824 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1085 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 Gene3D G3DSA:1.10.150.280 872 920 5.6E-7 T 23-04-2016 NIAKO_RS05055 93de5a7c9c7dd56e71ff8dfc79e61a59 1213 SUPERFAMILY SSF89550 4 288 1.04E-38 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS34905 9614e0474d555f0e5d132dbb3936810c 260 SUPERFAMILY SSF56281 3 238 3.25E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34905 9614e0474d555f0e5d132dbb3936810c 260 PANTHER PTHR15032 3 253 7.1E-30 T 23-04-2016 NIAKO_RS34905 9614e0474d555f0e5d132dbb3936810c 260 Pfam PF12706 Beta-lactamase superfamily domain 22 221 2.5E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34905 9614e0474d555f0e5d132dbb3936810c 260 Gene3D G3DSA:3.60.15.10 2 257 3.1E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 1.4E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 Gene3D G3DSA:2.60.120.10 9 160 1.5E-31 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 SUPERFAMILY SSF51206 10 131 6.02E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 PANTHER PTHR24567:SF33 16 194 5.1E-22 T 23-04-2016 NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 SMART SM00100 15 134 9.5E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07135 51bd8d015c40356c113d54a366e179b4 194 PANTHER PTHR24567 16 194 5.1E-22 T 23-04-2016 NIAKO_RS04610 f486d7b59aa89fc81c369b030ec0a751 91 Pfam PF14026 Protein of unknown function (DUF4242) 4 80 1.1E-29 T 23-04-2016 IPR025336 Protein of unknown function DUF4242 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 SUPERFAMILY SSF47413 5 72 4.1E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 PANTHER PTHR10245 11 140 9.2E-12 T 23-04-2016 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 PANTHER PTHR10245:SF58 11 140 9.2E-12 T 23-04-2016 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 Pfam PF12844 Helix-turn-helix domain 13 74 1.9E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 SMART SM00530 15 69 4.7E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS08730 4570e1c413f58ef6bb8ea83921cf8552 144 Gene3D G3DSA:1.10.260.40 13 74 8.9E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 SUPERFAMILY SSF46689 228 274 2.91E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 Gene3D G3DSA:2.60.120.280 29 160 1.4E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 PANTHER PTHR11019 28 279 3.8E-32 T 23-04-2016 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 Pfam PF02311 AraC-like ligand binding domain 28 81 1.9E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 SUPERFAMILY SSF51215 30 158 2.22E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 PANTHER PTHR11019:SF45 28 279 3.8E-32 T 23-04-2016 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 Pfam PF12833 Helix-turn-helix domain 194 273 1.9E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 Gene3D G3DSA:1.10.10.60 228 273 1.3E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20015 668f5cff5269dd54277402e053ffe9d5 280 SMART SM00342 188 271 2.0E-6 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 PANTHER PTHR26402 2 137 1.7E-25 T 23-04-2016 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 SMART SM00448 2 112 2.9E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 Gene3D G3DSA:3.40.50.2300 1 123 3.0E-26 T 23-04-2016 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 Gene3D G3DSA:2.40.50.40 143 211 2.7E-19 T 23-04-2016 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 Pfam PF04397 LytTr DNA-binding domain 152 245 3.8E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 SUPERFAMILY SSF52172 1 129 1.85E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 SMART SM00850 151 247 1.4E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS14805 99a65c8f711e98d5a04c53a6eccde872 249 Pfam PF00072 Response regulator receiver domain 5 112 8.3E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 PANTHER PTHR11731 301 763 1.8E-116 T 23-04-2016 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 PANTHER PTHR11731 161 284 1.8E-116 T 23-04-2016 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 SUPERFAMILY SSF53474 490 753 1.11E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 118 460 1.2E-33 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 Pfam PF00326 Prolyl oligopeptidase family 547 752 2.9E-27 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 Gene3D G3DSA:2.140.10.30 53 479 1.7E-49 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 PANTHER PTHR11731:SF118 301 763 1.8E-116 T 23-04-2016 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 PANTHER PTHR11731:SF118 161 284 1.8E-116 T 23-04-2016 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 SUPERFAMILY SSF82171 209 492 5.1E-19 T 23-04-2016 NIAKO_RS11645 bd14f5ab83e1fcba5480a09994cb59a2 764 Gene3D G3DSA:3.40.50.1820 490 754 2.1E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214:SF2 637 764 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214:SF2 858 1104 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214:SF2 2 236 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214:SF2 496 621 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214:SF2 354 400 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214 637 764 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214 858 1104 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214 2 236 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214 496 621 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 PANTHER PTHR16214 354 400 1.9E-171 T 23-04-2016 NIAKO_RS14350 e8483322aac431a1784f6949f619df19 1141 Pfam PF11028 Protein of unknown function (DUF2723) 34 222 1.3E-70 T 23-04-2016 IPR021280 Protein of unknown function DUF2723 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 SMART SM00448 4 112 1.1E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 PANTHER PTHR26402 4 119 3.4E-28 T 23-04-2016 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 SUPERFAMILY SSF52172 1 118 1.71E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 Pfam PF04397 LytTr DNA-binding domain 145 232 9.6E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 Gene3D G3DSA:3.40.50.2300 3 119 1.7E-24 T 23-04-2016 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 Pfam PF00072 Response regulator receiver domain 7 112 3.6E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 PANTHER PTHR26402:SF522 4 119 3.4E-28 T 23-04-2016 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 SMART SM00850 143 234 6.7E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS35575 02610d6da9523723ee23c1ca0b1383bf 235 Gene3D G3DSA:2.40.50.40 137 201 3.2E-18 T 23-04-2016 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 PANTHER PTHR21090 1 434 1.1E-139 T 23-04-2016 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 Gene3D G3DSA:3.65.10.10 228 433 5.3E-46 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 434 34.682 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 1.9E-62 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 Gene3D G3DSA:3.65.10.10 21 227 1.1E-53 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 433 4.5E-134 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32390 210c2a5daf45d0f65e0f136f5c4e1679 434 SUPERFAMILY SSF55205 1 433 5.56E-103 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NIAKO_RS30840 9d28f92871ed21dd4e4bf2faab5bb7ee 117 SUPERFAMILY SSF52833 1 112 6.32E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS30840 9d28f92871ed21dd4e4bf2faab5bb7ee 117 Pfam PF03960 ArsC family 44 111 1.4E-8 T 23-04-2016 IPR006660 Arsenate reductase-like NIAKO_RS30840 9d28f92871ed21dd4e4bf2faab5bb7ee 117 Gene3D G3DSA:3.40.30.10 2 112 1.7E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31130 e9fd906cac0931b0c21103ae833af7eb 127 Pfam PF00583 Acetyltransferase (GNAT) family 33 115 5.8E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS31130 e9fd906cac0931b0c21103ae833af7eb 127 Gene3D G3DSA:3.40.630.30 8 125 1.4E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS31130 e9fd906cac0931b0c21103ae833af7eb 127 PANTHER PTHR23091 2 119 5.6E-17 T 23-04-2016 NIAKO_RS31130 e9fd906cac0931b0c21103ae833af7eb 127 SUPERFAMILY SSF55729 6 119 6.87E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24945 ddca7cfb9d4a110b28423da0902e1e73 220 Hamap MF_00991 Futalosine hydrolase [mqnB]. 4 214 21.259 T 23-04-2016 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS24945 ddca7cfb9d4a110b28423da0902e1e73 220 Pfam PF01048 Phosphorylase superfamily 37 202 4.6E-11 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS24945 ddca7cfb9d4a110b28423da0902e1e73 220 SUPERFAMILY SSF53167 1 197 3.4E-24 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS24945 ddca7cfb9d4a110b28423da0902e1e73 220 TIGRFAM TIGR03664 fut_nucase: futalosine hydrolase 3 212 6.0E-48 T 23-04-2016 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS24945 ddca7cfb9d4a110b28423da0902e1e73 220 Gene3D G3DSA:3.40.50.1580 1 213 2.5E-31 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Gene3D G3DSA:3.30.70.1430 40 139 1.3E-18 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82693 40 133 1.26E-18 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82714 183 265 4.71E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Gene3D G3DSA:1.10.3850.10 270 487 1.0E-44 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Gene3D G3DSA:1.10.3850.10 795 1007 1.7E-47 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 1.1E-192 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82714 705 788 1.09E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PANTHER PTHR32063 1 1007 1.0E-268 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82866 790 1010 6.15E-42 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 1.2E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82866 301 486 1.1E-36 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82693 266 321 1.92E-7 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 SUPERFAMILY SSF82693 138 180 1.92E-7 T 23-04-2016 NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Gene3D G3DSA:3.30.2090.10 183 264 1.0E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS16360 0d42fc338e298c6ac7f1774774815b3c 1026 Gene3D G3DSA:3.30.2090.10 705 789 8.9E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 Pfam PF16344 Domain of unknown function (DUF4974) 349 427 5.2E-18 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273 191 288 4.7E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273 9 126 4.7E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273 307 430 4.7E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 Pfam PF04773 FecR protein 190 284 3.2E-22 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273:SF2 191 288 4.7E-60 T 23-04-2016 NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273:SF2 9 126 4.7E-60 T 23-04-2016 NIAKO_RS16870 6cabd6ffdfc5679dcf3e75f29bbeb7a9 430 PANTHER PTHR30273:SF2 307 430 4.7E-60 T 23-04-2016 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 Pfam PF07730 Histidine kinase 69 125 3.0E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 SUPERFAMILY SSF55874 170 264 4.58E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 SMART SM00387 168 266 3.2E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 171 265 3.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 204 218 8.75E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 250 263 8.75E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 244 8.75E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 PANTHER PTHR24421 8 266 1.0E-38 T 23-04-2016 NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 Gene3D G3DSA:3.30.565.10 107 127 1.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08530 1cd12a34f274a1e02702e4c96eb65bfb 271 Gene3D G3DSA:3.30.565.10 166 265 1.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594:SF5 1 297 3.5E-234 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594:SF5 492 593 3.5E-234 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594:SF5 377 469 3.5E-234 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 604 2.4E-208 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Pfam PF01336 OB-fold nucleic acid binding domain 19 100 2.2E-10 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.3E-24 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 540 554 1.3E-24 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.3E-24 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 496 512 1.3E-24 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 SUPERFAMILY SSF55261 310 426 1.19E-29 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Gene3D G3DSA:2.40.50.140 1 105 6.8E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Gene3D G3DSA:3.30.1360.30 277 420 3.4E-35 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 SUPERFAMILY SSF50249 1 103 2.86E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 SUPERFAMILY SSF55681 432 605 4.02E-94 T 23-04-2016 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 SUPERFAMILY SSF55681 111 292 4.02E-94 T 23-04-2016 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 579 1.9E-100 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594 1 297 3.5E-234 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594 492 593 3.5E-234 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 PANTHER PTHR22594 377 469 3.5E-234 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Pfam PF02938 GAD domain 321 413 1.9E-16 T 23-04-2016 IPR029351 GAD domain NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Gene3D G3DSA:3.30.930.10 421 606 1.7E-105 T 23-04-2016 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Gene3D G3DSA:3.30.930.10 134 276 1.7E-105 T 23-04-2016 NIAKO_RS00635 011e2fc0e3d8b6a89d4b15e041cc5b81 608 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 585 33.155 T 23-04-2016 NIAKO_RS29075 06bd3809699b197219835adf91afe566 232 Gene3D G3DSA:2.60.40.1190 31 231 3.2E-22 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS29075 06bd3809699b197219835adf91afe566 232 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 45 231 5.0E-4 T 23-04-2016 NIAKO_RS29075 06bd3809699b197219835adf91afe566 232 SUPERFAMILY SSF49344 32 231 7.85E-24 T 23-04-2016 NIAKO_RS29075 06bd3809699b197219835adf91afe566 232 Pfam PF06452 Carbohydrate family 9 binding domain-like 36 232 2.8E-20 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS17370 33d62066d2a77b192d784d441e8fdb59 439 SUPERFAMILY SSF51126 25 410 2.91E-61 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17370 33d62066d2a77b192d784d441e8fdb59 439 Pfam PF14592 Chondroitinase B 25 322 2.5E-41 T 23-04-2016 NIAKO_RS17370 33d62066d2a77b192d784d441e8fdb59 439 Gene3D G3DSA:2.160.20.10 24 437 4.7E-72 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 Gene3D G3DSA:3.40.430.10 133 311 1.4E-48 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 315 2.6E-82 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 Pfam PF01872 RibD C-terminal domain 152 309 3.8E-31 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 PANTHER PTHR11079 5 225 1.9E-55 T 23-04-2016 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 PIRSF PIRSF006769 1 351 2.2E-102 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 SUPERFAMILY SSF53597 150 315 1.23E-38 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 104 1.3E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 Gene3D G3DSA:3.40.140.10 5 132 3.1E-29 T 23-04-2016 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 SUPERFAMILY SSF53927 5 148 1.89E-41 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS22405 7966b285dd083089555b4a18ceaed398 352 PANTHER PTHR11079:SF10 5 225 1.9E-55 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 1128 1306 6.89E-45 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.40.50.980 684 843 1.6E-31 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.40.50.980 1746 1892 7.0E-29 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00501 AMP-binding enzyme 536 930 4.0E-87 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00501 AMP-binding enzyme 1597 1989 4.5E-91 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF47336 1035 1107 1.02E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:2.30.38.10 844 919 8.2E-26 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:2.30.38.10 1901 1979 1.2E-26 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 2353 2601 2.56E-31 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2476 2629 2.1E-34 T 23-04-2016 IPR010060 Non-ribosomal peptide synthase NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF13193 AMP-binding enzyme C-terminal domain 1997 2069 3.9E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF13193 AMP-binding enzyme C-terminal domain 939 1011 7.0E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:1.10.1200.10 1044 1110 1.4E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:1.10.1200.10 2101 2162 7.5E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 557 954 4.2E-121 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1618 2013 1.7E-118 T 23-04-2016 IPR010071 Amino acid adenylation domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF13745 HxxPF-repeated domain 394 486 4.4E-20 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF13745 HxxPF-repeated domain 1447 1543 7.5E-21 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF56801 528 1051 4.84E-136 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 678 689 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1739 1750 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF56801 1555 2108 2.88E-139 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.30.300.30 925 1043 2.8E-34 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.30.300.30 1985 2100 2.7E-33 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00668 Condensation domain 2176 2470 1.4E-61 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00668 Condensation domain 1123 1424 2.0E-73 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00668 Condensation domain 70 370 3.9E-80 T 23-04-2016 IPR001242 Condensation domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 263 503 2.78E-53 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00550 Phosphopantetheine attachment site 2100 2161 2.5E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Pfam PF00550 Phosphopantetheine attachment site 1040 1103 6.4E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2121 2136 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.40.50.980 1588 1745 8.2E-52 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 Gene3D G3DSA:3.40.50.980 530 683 5.4E-46 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 PANTHER PTHR24095:SF137 6 2069 0.0 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 PANTHER PTHR24095 6 2069 0.0 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 1316 1560 5.45E-55 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 2170 2342 8.23E-39 T 23-04-2016 NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF47336 2092 2161 7.72E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11515 e9bceed37b7b8cc48be2b5ad0a91b125 2632 SUPERFAMILY SSF52777 76 253 5.78E-45 T 23-04-2016 NIAKO_RS06005 fec7d3a945ac0d2652c96eebfd190e51 1145 PANTHER PTHR31120 238 295 2.3E-12 T 23-04-2016 NIAKO_RS06005 fec7d3a945ac0d2652c96eebfd190e51 1145 PANTHER PTHR31120:SF6 238 295 2.3E-12 T 23-04-2016 NIAKO_RS06005 fec7d3a945ac0d2652c96eebfd190e51 1145 Pfam PF01963 TraB family 30 287 1.6E-52 T 23-04-2016 IPR002816 Pheromone shutdown, TraB NIAKO_RS29675 ae5cd76704c7ebcfab1b3f3e12956b2b 358 Gene3D G3DSA:3.30.565.40 190 259 4.2E-7 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 NIAKO_RS29675 ae5cd76704c7ebcfab1b3f3e12956b2b 358 Gene3D G3DSA:3.90.640.20 275 356 2.4E-13 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 NIAKO_RS29675 ae5cd76704c7ebcfab1b3f3e12956b2b 358 Pfam PF11738 Protein of unknown function (DUF3298) 275 340 3.9E-7 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 SUPERFAMILY SSF54843 1 111 2.49E-32 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 110 3.8E-25 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 113 22.768 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 Pfam PF00237 Ribosomal protein L22p/L17e 8 110 1.0E-25 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 PANTHER PTHR13501 1 110 2.0E-27 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22975 d61596007445a6707384a379a5950939 113 Gene3D G3DSA:3.90.470.10 1 111 4.2E-31 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 PANTHER PTHR30572 404 798 8.1E-43 T 23-04-2016 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 PANTHER PTHR30572 262 356 8.1E-43 T 23-04-2016 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 PANTHER PTHR30572:SF4 404 798 8.1E-43 T 23-04-2016 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 PANTHER PTHR30572:SF4 262 356 8.1E-43 T 23-04-2016 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 Pfam PF02687 FtsX-like permease family 290 406 2.1E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 Pfam PF02687 FtsX-like permease family 679 779 8.4E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS19930 49d3afedff29ce611ec1f9fd883b6614 798 Pfam PF12704 MacB-like periplasmic core domain 20 248 2.1E-15 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS14785 9bdca97a8cf694c4b2c86dc4e20ba79b 258 PANTHER PTHR34300:SF2 15 255 4.3E-53 T 23-04-2016 NIAKO_RS14785 9bdca97a8cf694c4b2c86dc4e20ba79b 258 Pfam PF02592 Putative vitamin uptake transporter 62 232 8.6E-49 T 23-04-2016 IPR003744 Protein of unknown function DUF165 NIAKO_RS14785 9bdca97a8cf694c4b2c86dc4e20ba79b 258 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 32 232 1.6E-40 T 23-04-2016 IPR003744 Protein of unknown function DUF165 NIAKO_RS14785 9bdca97a8cf694c4b2c86dc4e20ba79b 258 PANTHER PTHR34300 15 255 4.3E-53 T 23-04-2016 NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 PANTHER PTHR24220 5 222 8.2E-95 T 23-04-2016 NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 Gene3D G3DSA:3.40.50.300 3 225 1.6E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 PANTHER PTHR24220:SF450 5 222 8.2E-95 T 23-04-2016 NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 SMART SM00382 28 208 9.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 Pfam PF00005 ABC transporter 20 160 1.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 SUPERFAMILY SSF52540 4 223 7.29E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS36230 cbfdf72ce6bd7acd58fc865eabd143b1 309 Pfam PF13732 Domain of unknown function (DUF4162) 214 295 7.5E-14 T 23-04-2016 IPR025302 Domain of unknown function DUF4162 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:3.30.565.10 846 1008 2.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF55874 407 573 1.57E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SMART SM00388 350 418 1.4E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SMART SM00388 777 845 2.7E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF55874 834 1008 5.5E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:1.10.287.130 770 841 3.2E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:1.10.287.130 341 403 2.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF52172 627 760 2.42E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:3.30.565.10 404 575 4.3E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:3.40.50.2300 626 747 1.1E-39 T 23-04-2016 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Gene3D G3DSA:3.30.450.20 58 172 4.4E-6 T 23-04-2016 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SMART SM00387 886 1009 9.2E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SMART SM00387 464 575 7.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF47384 762 844 1.39E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Pfam PF00512 His Kinase A (phospho-acceptor) domain 780 842 9.2E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Pfam PF00512 His Kinase A (phospho-acceptor) domain 351 418 2.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 1.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 1.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 1.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 1.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 572 6.1E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 891 1008 4.1E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF55785 59 170 5.35E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SMART SM00448 625 737 1.1E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 SUPERFAMILY SSF47384 337 419 5.49E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PANTHER PTHR24423 50 269 4.1E-121 T 23-04-2016 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 PANTHER PTHR24423 337 782 4.1E-121 T 23-04-2016 NIAKO_RS08090 5854e1e0757b2a2b1c7227342a1da713 1009 Pfam PF00072 Response regulator receiver domain 627 737 6.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25555 74bf7624caf720a83504fad717962e2d 113 Pfam PF03795 YCII-related domain 59 107 6.0E-9 T 23-04-2016 IPR005545 YCII-related NIAKO_RS25555 74bf7624caf720a83504fad717962e2d 113 SUPERFAMILY SSF54909 15 111 3.49E-14 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS25555 74bf7624caf720a83504fad717962e2d 113 Gene3D G3DSA:3.30.70.1060 1 110 3.6E-18 T 23-04-2016 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 PANTHER PTHR30173:SF20 1 195 2.7E-40 T 23-04-2016 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 Pfam PF08281 Sigma-70, region 4 125 176 5.3E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 PANTHER PTHR30173 1 195 2.7E-40 T 23-04-2016 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 SUPERFAMILY SSF88659 122 183 2.06E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 181 1.0E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 Gene3D G3DSA:1.10.1740.10 9 113 3.9E-22 T 23-04-2016 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 1.2E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 Gene3D G3DSA:1.10.10.10 121 183 2.2E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 Pfam PF04542 Sigma-70 region 2 27 92 6.8E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20850 227b181a6dd88d37f1d0be87bdeed04a 197 SUPERFAMILY SSF88946 9 97 1.73E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 Pfam PF01569 PAP2 superfamily 305 429 2.0E-10 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 SUPERFAMILY SSF48317 145 435 3.14E-44 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 Gene3D G3DSA:1.20.144.10 46 163 4.3E-10 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 PANTHER PTHR34599 95 437 1.1E-35 T 23-04-2016 NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 PANTHER PTHR34599 42 79 1.1E-35 T 23-04-2016 NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 Gene3D G3DSA:1.10.606.10 164 437 3.3E-81 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 PANTHER PTHR34599:SF1 95 437 1.1E-35 T 23-04-2016 NIAKO_RS32950 ac9aabd425c577c43ae5439b77fa0abb 445 PANTHER PTHR34599:SF1 42 79 1.1E-35 T 23-04-2016 NIAKO_RS18405 88d48676877c50ea1aa4d61f9d39cf2f 326 Gene3D G3DSA:3.90.1580.10 15 324 4.4E-91 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS18405 88d48676877c50ea1aa4d61f9d39cf2f 326 SUPERFAMILY SSF56436 17 322 3.39E-90 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS18405 88d48676877c50ea1aa4d61f9d39cf2f 326 Pfam PF03781 Sulfatase-modifying factor enzyme 1 18 322 2.3E-85 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS18405 88d48676877c50ea1aa4d61f9d39cf2f 326 PANTHER PTHR23150 18 259 6.9E-93 T 23-04-2016 NIAKO_RS18405 88d48676877c50ea1aa4d61f9d39cf2f 326 PANTHER PTHR23150 283 323 6.9E-93 T 23-04-2016 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 Gene3D G3DSA:3.40.50.2300 59 178 4.3E-43 T 23-04-2016 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 SMART SM00354 6 76 5.1E-27 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.0E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 PANTHER PTHR30146 5 341 5.4E-103 T 23-04-2016 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 Pfam PF13377 Periplasmic binding protein-like domain 176 340 5.4E-32 T 23-04-2016 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 SUPERFAMILY SSF53822 66 340 8.05E-68 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 Gene3D G3DSA:3.40.50.2300 179 318 1.2E-46 T 23-04-2016 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 Gene3D G3DSA:1.10.260.40 7 58 6.5E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS15440 2057065f4ba58340833b4dea972bb3da 349 SUPERFAMILY SSF47413 6 64 9.14E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 SUPERFAMILY SSF103473 331 575 1.31E-9 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654:SF119 403 577 2.8E-153 T 23-04-2016 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654:SF119 18 243 2.8E-153 T 23-04-2016 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654:SF119 282 334 2.8E-153 T 23-04-2016 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 Pfam PF00854 POT family 402 533 7.1E-22 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 Pfam PF00854 POT family 93 388 4.0E-31 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 22 362 1.9E-62 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 Gene3D G3DSA:1.20.1250.20 374 572 4.2E-5 T 23-04-2016 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 Gene3D G3DSA:1.20.1250.20 29 213 1.2E-24 T 23-04-2016 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654 403 577 2.8E-153 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654 18 243 2.8E-153 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 PANTHER PTHR11654 282 334 2.8E-153 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS33825 2775287b285e2e68460d0dfb4faecbd2 582 SUPERFAMILY SSF103473 18 381 9.55E-27 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 PANTHER PTHR11908:SF66 1 140 1.1E-40 T 23-04-2016 NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 Pfam PF01799 [2Fe-2S] binding domain 75 147 1.2E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 Gene3D G3DSA:3.10.20.30 3 76 1.9E-24 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 SUPERFAMILY SSF47741 86 156 4.45E-33 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 Gene3D G3DSA:1.10.150.120 77 156 6.6E-37 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 PANTHER PTHR11908 1 140 1.1E-40 T 23-04-2016 NIAKO_RS03890 390bf974c1ddd5d9f758e5e89af10267 161 SUPERFAMILY SSF54292 4 89 9.7E-23 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 SUPERFAMILY SSF51445 307 499 3.74E-16 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 PANTHER PTHR35803 1 646 1.8E-150 T 23-04-2016 NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 Gene3D G3DSA:3.20.20.70 332 443 1.8E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 27 290 7.1E-50 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 PANTHER PTHR35803:SF2 1 646 1.8E-150 T 23-04-2016 NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 Pfam PF10566 Glycoside hydrolase 97 297 552 3.0E-62 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS31565 211e04ddbb9187a543f4d4403e429cd0 646 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 556 645 7.1E-14 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS23255 c9eecfc99ab2fea3a82fad2f4e4b2dcb 257 Pfam PF13645 L,D-transpeptidase catalytic domain 76 243 3.3E-66 T 23-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain NIAKO_RS23255 c9eecfc99ab2fea3a82fad2f4e4b2dcb 257 PANTHER PTHR38477 18 257 4.1E-64 T 23-04-2016 NIAKO_RS23255 c9eecfc99ab2fea3a82fad2f4e4b2dcb 257 PANTHER PTHR38477:SF1 18 257 4.1E-64 T 23-04-2016 NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 Gene3D G3DSA:3.30.230.10 4 129 4.5E-45 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 PANTHER PTHR21569 7 129 5.0E-52 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 PANTHER PTHR21569:SF1 7 129 5.0E-52 T 23-04-2016 NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 1.0E-42 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS29700 e13bfdacefdefa5b82d4d1efe7565bf4 129 SUPERFAMILY SSF54211 6 129 4.17E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS20525 af4c827ee453f513b868bc0625d8c329 203 Pfam PF02525 Flavodoxin-like fold 3 163 7.4E-40 T 23-04-2016 IPR003680 Flavodoxin-like fold NIAKO_RS20525 af4c827ee453f513b868bc0625d8c329 203 PANTHER PTHR10204 1 203 2.8E-67 T 23-04-2016 NIAKO_RS20525 af4c827ee453f513b868bc0625d8c329 203 PANTHER PTHR10204:SF42 1 203 2.8E-67 T 23-04-2016 NIAKO_RS20525 af4c827ee453f513b868bc0625d8c329 203 Gene3D G3DSA:3.40.50.360 1 178 1.2E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS20525 af4c827ee453f513b868bc0625d8c329 203 SUPERFAMILY SSF52218 1 180 2.02E-47 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS31425 63a07a06107300c5b54fd7a04ca297a8 169 Gene3D G3DSA:3.40.50.620 1 107 3.1E-9 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS31425 63a07a06107300c5b54fd7a04ca297a8 169 SUPERFAMILY SSF52402 1 108 1.17E-8 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 Pfam PF01103 Surface antigen 567 736 4.7E-28 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 Gene3D G3DSA:2.40.160.50 558 735 2.2E-12 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815:SF13 564 730 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815:SF13 99 232 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815:SF13 269 548 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815:SF13 749 761 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815 564 730 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815 99 232 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815 269 548 8.1E-31 T 23-04-2016 NIAKO_RS09240 c757ccc672adfa4c35266525e94f60bc 761 PANTHER PTHR12815 749 761 8.1E-31 T 23-04-2016 NIAKO_RS04155 b87cdb025d6a7cc42f7fe4ca4b9aaa6e 232 Pfam PF12099 Protein of unknown function (DUF3575) 48 182 6.2E-7 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 223 236 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 Pfam PF00146 NADH dehydrogenase 21 342 7.6E-122 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 PANTHER PTHR11432:SF3 9 354 5.0E-145 T 23-04-2016 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 PANTHER PTHR11432 9 354 5.0E-145 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 9 349 24.167 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS34795 a318947ec7c57bdb867cb69a05764b1e 355 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 58 73 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 NIAKO_RS13435 9975fea1c3bc80868f4fe1fe52f4ba2f 151 SMART SM00448 10 135 1.0E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13435 9975fea1c3bc80868f4fe1fe52f4ba2f 151 Gene3D G3DSA:3.40.50.2300 6 136 6.2E-31 T 23-04-2016 NIAKO_RS13435 9975fea1c3bc80868f4fe1fe52f4ba2f 151 SUPERFAMILY SSF52172 6 137 4.84E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13435 9975fea1c3bc80868f4fe1fe52f4ba2f 151 PANTHER PTHR26402 10 129 5.8E-26 T 23-04-2016 NIAKO_RS13435 9975fea1c3bc80868f4fe1fe52f4ba2f 151 Pfam PF00072 Response regulator receiver domain 12 135 1.5E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.170.130.10 115 228 5.7E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF49464 31 110 3.53E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Pfam PF00593 TonB dependent receptor 620 844 2.5E-17 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 227 9.2E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1076 1.8E-267 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 203 233 8.5E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 PANTHER PTHR11532:SF57 468 1074 3.5E-254 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 PANTHER PTHR11532:SF57 11 373 3.5E-254 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 PANTHER PTHR11532 468 1074 3.5E-254 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 PANTHER PTHR11532 11 373 3.5E-254 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Pfam PF13715 CarboxypepD_reg-like domain 32 112 2.7E-18 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF56935 108 251 2.23E-90 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF56935 445 787 2.23E-90 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF56935 319 407 2.23E-90 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF56935 879 922 2.23E-90 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 SUPERFAMILY SSF56935 983 1076 2.23E-90 T 23-04-2016 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.40.170.20 328 795 5.4E-64 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.40.170.20 887 929 5.4E-64 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.40.170.20 990 1076 5.4E-64 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.40.170.20 229 247 5.4E-64 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06600 82bbb4af322292ea63f3978b9fb55b03 1076 Gene3D G3DSA:2.60.40.1120 32 114 2.8E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SMART SM00387 293 405 7.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SUPERFAMILY SSF55874 251 404 1.31E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SMART SM00065 26 168 2.0E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PANTHER PTHR24423 163 405 1.2E-104 T 23-04-2016 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PANTHER PTHR24423 44 136 1.2E-104 T 23-04-2016 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SMART SM00388 184 252 2.8E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SUPERFAMILY SSF55781 26 170 1.22E-22 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 402 4.1E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 186 249 8.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 2.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 346 2.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 2.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Gene3D G3DSA:3.30.450.40 11 173 1.3E-21 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Gene3D G3DSA:3.30.565.10 251 402 5.8E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PANTHER PTHR24423:SF383 163 405 1.2E-104 T 23-04-2016 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 PANTHER PTHR24423:SF383 44 136 1.2E-104 T 23-04-2016 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Gene3D G3DSA:1.10.287.130 176 246 8.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 SUPERFAMILY SSF47384 168 250 1.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS17965 e86a3c3db46dff0edf517d2b6a522825 406 Pfam PF13185 GAF domain 24 159 1.1E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 PANTHER PTHR11615:SF115 9 234 8.5E-67 T 23-04-2016 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 SUPERFAMILY SSF54862 94 227 7.53E-34 T 23-04-2016 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 PANTHER PTHR11615 9 234 8.5E-67 T 23-04-2016 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 139 4.2E-18 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 Gene3D G3DSA:3.10.20.30 10 67 4.8E-6 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 SUPERFAMILY SSF54292 9 90 1.04E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 SMART SM00929 101 141 6.9E-21 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NIAKO_RS34790 642603ac009231e13677447f2525eff3 362 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 8 91 1.7E-13 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF56935 490 839 3.57E-54 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF56935 231 303 3.57E-54 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF56935 128 197 3.57E-54 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF56935 907 951 3.57E-54 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF56935 362 449 3.57E-54 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Gene3D G3DSA:2.60.40.1120 48 130 6.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 SUPERFAMILY SSF49464 48 128 7.46E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 48 1074 5.4E-156 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532 630 847 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532 28 201 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532 231 448 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532 864 1072 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532 569 598 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Gene3D G3DSA:2.40.170.20 371 839 4.0E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Pfam PF13715 CarboxypepD_reg-like domain 48 130 7.9E-13 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 279 4.4E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532:SF57 630 847 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532:SF57 28 201 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532:SF57 231 448 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532:SF57 864 1072 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 PANTHER PTHR11532:SF57 569 598 4.6E-126 T 23-04-2016 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Gene3D G3DSA:2.170.130.10 135 198 3.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 Gene3D G3DSA:2.170.130.10 232 282 3.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15175 6ac0ca799f30cf194a718b7a6483e19f 1074 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 256 285 8.9E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Gene3D G3DSA:3.30.830.10 42 106 6.1E-44 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Gene3D G3DSA:3.30.830.10 155 309 6.1E-44 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Gene3D G3DSA:3.30.830.10 562 737 1.1E-20 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 SUPERFAMILY SSF63411 173 299 1.76E-39 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Pfam PF00675 Insulinase (Peptidase family M16) 597 693 1.9E-6 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Pfam PF00675 Insulinase (Peptidase family M16) 59 105 1.8E-9 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 PANTHER PTHR11851:SF136 166 977 1.3E-154 T 23-04-2016 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 PANTHER PTHR11851:SF136 9 115 1.3E-154 T 23-04-2016 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 78 101 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Gene3D G3DSA:3.30.830.10 793 951 7.7E-19 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Gene3D G3DSA:3.30.830.10 344 499 5.6E-16 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 SUPERFAMILY SSF63411 769 963 4.33E-26 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Pfam PF05193 Peptidase M16 inactive domain 264 432 2.5E-18 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 Pfam PF05193 Peptidase M16 inactive domain 783 874 7.4E-8 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 SUPERFAMILY SSF63411 563 747 1.33E-19 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 PANTHER PTHR11851 166 977 1.3E-154 T 23-04-2016 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 PANTHER PTHR11851 9 115 1.3E-154 T 23-04-2016 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 SUPERFAMILY SSF63411 334 501 5.42E-21 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS03935 5a168b2afc3b6eac5d77498fb3508b97 979 SUPERFAMILY SSF63411 43 125 1.76E-39 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 SMART SM00100 19 137 1.6E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 SUPERFAMILY SSF51206 17 147 1.01E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 SMART SM00419 176 224 1.8E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 SUPERFAMILY SSF46785 154 233 1.63E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 Pfam PF00027 Cyclic nucleotide-binding domain 38 124 4.1E-18 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 Gene3D G3DSA:1.10.10.10 154 233 7.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 Pfam PF13545 Crp-like helix-turn-helix domain 157 230 8.1E-16 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 PANTHER PTHR24567 19 234 2.0E-43 T 23-04-2016 NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 Gene3D G3DSA:2.60.120.10 19 151 2.4E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 1.0E-4 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS17145 923bffca31695ac794f510e0f538a9c8 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 1.0E-4 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS25400 028c21fd7f344f156750c72224da85bf 327 SUPERFAMILY SSF55486 87 287 1.22E-25 T 23-04-2016 NIAKO_RS25400 028c21fd7f344f156750c72224da85bf 327 SMART SM00235 89 230 2.8E-5 T 23-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 NIAKO_RS25400 028c21fd7f344f156750c72224da85bf 327 Gene3D G3DSA:3.40.390.10 88 286 5.3E-25 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS25400 028c21fd7f344f156750c72224da85bf 327 Pfam PF01400 Astacin (Peptidase family M12A) 103 255 3.5E-10 T 23-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 PANTHER PTHR10245 1 64 5.0E-14 T 23-04-2016 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 Pfam PF01381 Helix-turn-helix 12 63 6.5E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 SUPERFAMILY SSF47413 3 66 1.77E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 Pfam PF00717 Peptidase S24-like 176 239 1.5E-6 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 SMART SM00530 8 63 1.8E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 179 186 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 Gene3D G3DSA:1.10.260.40 5 65 1.2E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS37335 a6fbc65d41605055adea70c6a5401a93 299 SUPERFAMILY SSF51306 143 253 3.4E-10 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 Pfam PF07980 SusD family 266 562 1.1E-43 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 SUPERFAMILY SSF48452 16 562 9.1E-102 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 Gene3D G3DSA:1.25.40.10 423 515 1.9E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 Gene3D G3DSA:1.25.40.10 198 281 1.9E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 Gene3D G3DSA:1.25.40.10 323 337 1.9E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26500 bf70b9dc71eeb63c09d11ef47bb6dc98 578 Pfam PF14322 Starch-binding associating with outer membrane 22 215 2.8E-28 T 23-04-2016 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 SMART SM00478 40 197 3.6E-16 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 PANTHER PTHR10242 38 194 5.7E-59 T 23-04-2016 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 125 149 - T 23-04-2016 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 PANTHER PTHR10242:SF0 38 194 5.7E-59 T 23-04-2016 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 Gene3D G3DSA:1.10.1670.10 143 198 3.1E-13 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 Gene3D G3DSA:1.10.340.30 35 141 5.9E-28 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 SUPERFAMILY SSF48150 27 195 2.09E-40 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS29860 abc23a623dc5ee3505eeeee79c617abb 205 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 174 8.6E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 Gene3D G3DSA:3.40.1080.10 2 215 1.0E-94 T 23-04-2016 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 SUPERFAMILY SSF100950 2 225 3.0E-82 T 23-04-2016 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 PANTHER PTHR13707 1 232 5.8E-131 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 SMART SM00882 5 216 2.0E-83 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 1.2E-76 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 Pfam PF01144 Coenzyme A transferase 6 215 4.5E-74 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 NIAKO_RS25090 8f3f82d2f20d4b544d16adfce03fc045 232 PANTHER PTHR13707:SF23 1 232 5.8E-131 T 23-04-2016 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 96 121 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PANTHER PTHR23500 1 441 7.7E-168 T 23-04-2016 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PANTHER PTHR23500:SF22 1 441 7.7E-168 T 23-04-2016 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 1 433 1.6E-98 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 Gene3D G3DSA:1.20.1250.20 240 437 2.6E-22 T 23-04-2016 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 Gene3D G3DSA:1.20.1250.20 2 183 1.8E-22 T 23-04-2016 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 Pfam PF00083 Sugar (and other) transporter 1 437 3.6E-101 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PRINTS PR00171 Sugar transporter signature 248 258 2.3E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PRINTS PR00171 Sugar transporter signature 356 368 2.3E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PRINTS PR00171 Sugar transporter signature 333 354 2.3E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PRINTS PR00171 Sugar transporter signature 91 110 2.3E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 PRINTS PR00171 Sugar transporter signature 7 17 2.3E-19 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS17470 d8b3a25593139912c037f5de6f30d24c 443 SUPERFAMILY SSF103473 2 436 7.72E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 PIRSF PIRSF005096 7 356 2.5E-116 T 23-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 183 192 - T 23-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 Pfam PF01263 Aldose 1-epimerase 27 351 6.8E-85 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 SUPERFAMILY SSF74650 17 353 2.76E-108 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 PANTHER PTHR10091 1 356 1.7E-140 T 23-04-2016 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 PANTHER PTHR10091:SF0 1 356 1.7E-140 T 23-04-2016 NIAKO_RS16990 98416134e130ef6c3b4a9981ad26f00e 357 Gene3D G3DSA:2.70.98.10 19 355 4.5E-120 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS02840 0a6d57ff6efe67272d9db076322ad288 497 PANTHER PTHR31901:SF5 30 496 2.2E-41 T 23-04-2016 NIAKO_RS02840 0a6d57ff6efe67272d9db076322ad288 497 Pfam PF03321 GH3 auxin-responsive promoter 164 486 9.5E-59 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS02840 0a6d57ff6efe67272d9db076322ad288 497 PANTHER PTHR31901 30 496 2.2E-41 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 PANTHER PTHR35801:SF1 3 336 2.1E-43 T 23-04-2016 NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 SUPERFAMILY SSF55874 36 129 1.34E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 PANTHER PTHR35801 3 336 2.1E-43 T 23-04-2016 NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 Pfam PF13581 Histidine kinase-like ATPase domain 20 122 2.0E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 Gene3D G3DSA:3.30.565.10 24 128 1.6E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 SUPERFAMILY SSF81606 153 336 8.89E-8 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS14755 5b9bb0be08e3739ef40eed6921371e49 338 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 172 294 1.1E-6 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 Gene3D G3DSA:2.60.120.10 1 183 2.2E-75 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 176 1.3E-70 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.2E-70 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 7.0E-59 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 SUPERFAMILY SSF51182 1 184 8.54E-74 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS24675 b6840954f098389e2a1d7a45a50ffd75 186 PANTHER PTHR21047 1 176 1.4E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 PANTHER PTHR34406:SF1 2 176 6.9E-53 T 23-04-2016 NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 Pfam PF04264 YceI-like domain 6 172 2.7E-43 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 Gene3D G3DSA:2.40.128.110 5 176 1.1E-57 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 SUPERFAMILY SSF101874 5 176 6.02E-52 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 PANTHER PTHR34406 2 176 6.9E-53 T 23-04-2016 NIAKO_RS03830 7e860bd6b58db7c96813682315025bc5 177 SMART SM00867 5 174 1.8E-60 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 SUPERFAMILY SSF88946 15 96 1.57E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 PANTHER PTHR30173:SF20 15 187 5.2E-35 T 23-04-2016 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 SUPERFAMILY SSF88659 94 180 1.12E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 176 9.5E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 Pfam PF04542 Sigma-70 region 2 26 91 7.9E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 PANTHER PTHR30173 15 187 5.2E-35 T 23-04-2016 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 Gene3D G3DSA:1.10.1740.10 21 114 2.3E-15 T 23-04-2016 NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 Gene3D G3DSA:1.10.10.10 115 179 1.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS14605 07c899e7dbd7861d26b30348a8728303 187 Pfam PF08281 Sigma-70, region 4 122 172 2.1E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02725 6cd37bbfb9bf0355db67008dd62c1976 148 PANTHER PTHR23404:SF2 35 148 4.0E-31 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02725 6cd37bbfb9bf0355db67008dd62c1976 148 SUPERFAMILY SSF54690 24 147 1.57E-33 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02725 6cd37bbfb9bf0355db67008dd62c1976 148 Gene3D G3DSA:3.90.1170.40 22 147 1.2E-37 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02725 6cd37bbfb9bf0355db67008dd62c1976 148 Pfam PF02391 MoaE protein 23 127 1.5E-26 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02725 6cd37bbfb9bf0355db67008dd62c1976 148 PANTHER PTHR23404 35 148 4.0E-31 T 23-04-2016 NIAKO_RS24835 20caf777a53272e2cbb0ee038c3dfdb0 305 SUPERFAMILY SSF53474 57 300 6.29E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24835 20caf777a53272e2cbb0ee038c3dfdb0 305 Gene3D G3DSA:3.40.50.1820 53 300 1.3E-69 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24835 20caf777a53272e2cbb0ee038c3dfdb0 305 PANTHER PTHR23024 51 300 6.6E-64 T 23-04-2016 NIAKO_RS24835 20caf777a53272e2cbb0ee038c3dfdb0 305 Pfam PF00326 Prolyl oligopeptidase family 134 300 4.0E-14 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS24835 20caf777a53272e2cbb0ee038c3dfdb0 305 PANTHER PTHR23024:SF41 51 300 6.6E-64 T 23-04-2016 NIAKO_RS33695 d0a4a2bf593b96267b75ae4911c48080 445 Pfam PF13520 Amino acid permease 7 418 2.5E-49 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS33695 d0a4a2bf593b96267b75ae4911c48080 445 PIRSF PIRSF006060 2 444 4.7E-61 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS33695 d0a4a2bf593b96267b75ae4911c48080 445 PANTHER PTHR11785 6 442 2.2E-72 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS11825 e24e36b057ed5ea643fc90b96c7559aa 92 Gene3D G3DSA:3.40.30.10 14 90 3.0E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11825 e24e36b057ed5ea643fc90b96c7559aa 92 SUPERFAMILY SSF52833 3 88 2.04E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PANTHER PTHR24320 4 227 3.8E-49 T 23-04-2016 NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 Pfam PF00106 short chain dehydrogenase 7 193 1.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 Gene3D G3DSA:3.40.50.720 6 242 1.1E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 PANTHER PTHR24320:SF1 4 227 3.8E-49 T 23-04-2016 NIAKO_RS14300 54859a10bb47842bdfc2448e2e19a59e 268 SUPERFAMILY SSF51735 4 262 4.21E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Pfam PF08447 PAS fold 164 251 1.8E-19 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 477 8.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 SMART SM00091 141 209 5.7E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Gene3D G3DSA:3.30.450.20 132 277 4.6E-27 T 23-04-2016 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Pfam PF00072 Response regulator receiver domain 10 121 4.1E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 SUPERFAMILY SSF55874 390 478 3.41E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 SUPERFAMILY SSF55785 146 261 1.06E-22 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 PANTHER PTHR24421:SF18 252 478 4.4E-29 T 23-04-2016 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Pfam PF07730 Histidine kinase 287 349 3.0E-7 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 8.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 8.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 8.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 SMART SM00448 8 123 2.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 265 1.5E-14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 PANTHER PTHR24421 252 478 4.4E-29 T 23-04-2016 NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Gene3D G3DSA:3.30.565.10 374 478 1.3E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 SUPERFAMILY SSF52172 6 143 1.42E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS14400 7551bc216593e993b7af63cf95313486 479 Gene3D G3DSA:3.40.50.2300 7 131 4.3E-24 T 23-04-2016 NIAKO_RS20535 10bf493197cc87c25204e14bf9db1820 354 Gene3D G3DSA:3.20.20.70 1 349 1.8E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS20535 10bf493197cc87c25204e14bf9db1820 354 PANTHER PTHR22893:SF7 1 354 2.4E-176 T 23-04-2016 NIAKO_RS20535 10bf493197cc87c25204e14bf9db1820 354 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 3.4E-73 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NIAKO_RS20535 10bf493197cc87c25204e14bf9db1820 354 PANTHER PTHR22893 1 354 2.4E-176 T 23-04-2016 NIAKO_RS20535 10bf493197cc87c25204e14bf9db1820 354 SUPERFAMILY SSF51395 1 350 1.32E-118 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 485 554 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 230 403 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 1052 1098 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 693 992 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 598 650 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF56935 1149 1197 4.12E-64 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 Gene3D G3DSA:2.60.40.1120 154 235 9.0E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 343 373 1.5E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 153 1234 1.6E-180 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 SUPERFAMILY SSF49464 152 215 3.01E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532:SF57 151 314 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532:SF57 712 755 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532:SF57 585 609 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532:SF57 777 1233 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532:SF57 334 530 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 Pfam PF13715 CarboxypepD_reg-like domain 155 215 1.1E-14 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532 151 314 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532 712 755 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532 585 609 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532 777 1233 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 PANTHER PTHR11532 334 530 8.9E-166 T 23-04-2016 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 Pfam PF07715 TonB-dependent Receptor Plug Domain 240 367 1.3E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09820 366b70338ac048df903b2832df8ebb86 1235 Gene3D G3DSA:2.170.130.10 240 376 1.3E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PANTHER PTHR23115:SF175 397 596 3.0E-277 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PANTHER PTHR23115:SF175 2 373 3.0E-277 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PANTHER PTHR23115 397 596 3.0E-277 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PANTHER PTHR23115 2 373 3.0E-277 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 SUPERFAMILY SSF54980 399 494 2.97E-23 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Gene3D G3DSA:3.30.70.870 291 368 1.3E-24 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 SMART SM00838 398 486 0.0038 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.2E-52 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 285.484 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 SUPERFAMILY SSF52540 2 231 1.89E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 2.5E-297 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 SUPERFAMILY SSF54980 292 370 5.04E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Gene3D G3DSA:3.40.50.300 2 192 9.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Gene3D G3DSA:2.40.30.10 193 290 6.7E-24 T 23-04-2016 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Pfam PF00679 Elongation factor G C-terminus 399 486 2.5E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Pfam PF03144 Elongation factor Tu domain 2 206 275 1.2E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Gene3D G3DSA:3.30.70.240 401 490 1.6E-18 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 Pfam PF06421 GTP-binding protein LepA C-terminus 488 594 2.5E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal NIAKO_RS12590 37c95f5b30688804862f19a78b836a42 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 1.8E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS26985 948158346273400e5726b5c5190c7b2f 130 PANTHER PTHR11049 3 130 6.2E-65 T 23-04-2016 NIAKO_RS26985 948158346273400e5726b5c5190c7b2f 130 PANTHER PTHR11049:SF8 3 130 6.2E-65 T 23-04-2016 NIAKO_RS26985 948158346273400e5726b5c5190c7b2f 130 Gene3D G3DSA:3.10.129.10 5 123 1.4E-40 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS26985 948158346273400e5726b5c5190c7b2f 130 SUPERFAMILY SSF54637 7 126 1.3E-36 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS26985 948158346273400e5726b5c5190c7b2f 130 Pfam PF03061 Thioesterase superfamily 28 98 3.4E-17 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 Pfam PF02562 PhoH-like protein 110 313 1.0E-90 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 PANTHER PTHR30473:SF1 4 336 1.6E-138 T 23-04-2016 NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 PANTHER PTHR30473 4 336 1.6E-138 T 23-04-2016 NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 Gene3D G3DSA:3.40.50.300 109 312 7.1E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 SUPERFAMILY SSF52540 60 81 3.34E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19365 60c21b9cecd741df84871acad1a5a313 341 SUPERFAMILY SSF52540 109 288 3.34E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00345 b9cc835c87ca551cfd93235457811ff6 444 SUPERFAMILY SSF51126 10 444 5.8E-55 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS00345 b9cc835c87ca551cfd93235457811ff6 444 Pfam PF13229 Right handed beta helix region 131 266 7.8E-5 T 23-04-2016 NIAKO_RS00345 b9cc835c87ca551cfd93235457811ff6 444 Gene3D G3DSA:2.160.20.10 12 444 2.2E-75 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS00345 b9cc835c87ca551cfd93235457811ff6 444 Pfam PF16380 Domain of unknown function 369 437 9.4E-8 T 23-04-2016 IPR032153 Domain of unknown function DUF4990 NIAKO_RS34155 e8fad93d180ba6b5b9e66f4e6b4cad97 85 Pfam PF11297 Protein of unknown function (DUF3098) 15 82 9.6E-29 T 23-04-2016 IPR021448 Protein of unknown function DUF3098 NIAKO_RS30725 88ebdec20860735c0540c0dd11a33f21 157 Pfam PF12867 DinB superfamily 11 144 1.5E-15 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS30725 88ebdec20860735c0540c0dd11a33f21 157 Gene3D G3DSA:1.20.120.450 7 147 5.0E-29 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS30725 88ebdec20860735c0540c0dd11a33f21 157 SUPERFAMILY SSF109854 7 151 1.53E-26 T 23-04-2016 NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 Pfam PF16344 Domain of unknown function (DUF4974) 298 396 2.1E-17 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 PANTHER PTHR30273 1 127 8.0E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 PANTHER PTHR30273 191 403 8.0E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 PANTHER PTHR30273:SF2 1 127 8.0E-54 T 23-04-2016 NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 PANTHER PTHR30273:SF2 191 403 8.0E-54 T 23-04-2016 NIAKO_RS20215 db43bb32192447e73e96cfd7ab5d0db2 414 Pfam PF04773 FecR protein 189 288 5.9E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS19555 ee98433fea0952411da3366b7f92e8d9 347 PANTHER PTHR13696 1 195 3.0E-34 T 23-04-2016 NIAKO_RS19555 ee98433fea0952411da3366b7f92e8d9 347 Pfam PF13614 AAA domain 4 192 1.9E-34 T 23-04-2016 IPR025669 AAA domain NIAKO_RS19555 ee98433fea0952411da3366b7f92e8d9 347 PANTHER PTHR13696:SF52 1 195 3.0E-34 T 23-04-2016 NIAKO_RS19555 ee98433fea0952411da3366b7f92e8d9 347 Gene3D G3DSA:3.40.50.300 1 335 7.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19555 ee98433fea0952411da3366b7f92e8d9 347 SUPERFAMILY SSF52540 2 249 1.76E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 224 2.2E-61 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 PIRSF PIRSF004848 1 225 3.2E-72 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 SUPERFAMILY SSF51419 13 222 1.05E-69 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 Pfam PF01168 Alanine racemase, N-terminal domain 13 224 7.5E-20 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 Gene3D G3DSA:3.20.20.10 15 225 3.3E-77 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 PANTHER PTHR10146 17 224 4.5E-85 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 NIAKO_RS04850 cba51fe0da15af968d0294aa0febe38a 225 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 66 80 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 Pfam PF08281 Sigma-70, region 4 88 140 4.1E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 142 1.0E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 SUPERFAMILY SSF88659 73 145 1.31E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 SUPERFAMILY SSF88946 2 74 5.3E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 Gene3D G3DSA:1.10.1740.10 2 75 2.0E-19 T 23-04-2016 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 Gene3D G3DSA:1.10.10.10 83 144 1.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 PANTHER PTHR30173 1 145 4.2E-48 T 23-04-2016 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 Pfam PF04542 Sigma-70 region 2 1 61 5.9E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS30835 4a6e5c98369e8f2b32e1380fed02a4f8 152 PANTHER PTHR30173:SF8 1 145 4.2E-48 T 23-04-2016 NIAKO_RS36690 040780bbfe18d35d2e5681ba9869933f 235 PANTHER PTHR36436 1 205 6.7E-20 T 23-04-2016 NIAKO_RS36690 040780bbfe18d35d2e5681ba9869933f 235 PANTHER PTHR36436:SF1 1 205 6.7E-20 T 23-04-2016 NIAKO_RS36690 040780bbfe18d35d2e5681ba9869933f 235 Pfam PF09234 Domain of unknown function (DUF1963) 35 232 9.5E-25 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 NIAKO_RS36690 040780bbfe18d35d2e5681ba9869933f 235 Gene3D G3DSA:2.30.320.10 3 229 1.2E-35 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 NIAKO_RS36690 040780bbfe18d35d2e5681ba9869933f 235 SUPERFAMILY SSF103032 3 219 3.27E-31 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 Gene3D G3DSA:1.10.10.60 132 189 4.8E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 PANTHER PTHR11019:SF50 135 244 4.3E-15 T 23-04-2016 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 SMART SM00342 152 236 5.4E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 PANTHER PTHR11019 135 244 4.3E-15 T 23-04-2016 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 Pfam PF12833 Helix-turn-helix domain 159 234 7.7E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 SUPERFAMILY SSF46689 195 237 5.38E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23870 656e5df661ef51e73dee2d6eab9a1caa 245 Gene3D G3DSA:1.10.10.60 197 236 2.5E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 SUPERFAMILY SSF46689 265 309 2.87E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 PANTHER PTHR11019:SF61 210 307 1.0E-34 T 23-04-2016 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 Gene3D G3DSA:1.10.10.60 210 264 1.1E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 5.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 5.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 SUPERFAMILY SSF46689 212 262 2.06E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 PANTHER PTHR11019 210 307 1.0E-34 T 23-04-2016 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 Pfam PF12833 Helix-turn-helix domain 234 309 9.7E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 Gene3D G3DSA:1.10.10.60 265 309 2.1E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28210 13d9d5c9d282166b19ed2a04ab5ad0ed 313 SMART SM00342 228 311 9.0E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 SUPERFAMILY SSF51569 6 294 3.85E-67 T 23-04-2016 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 Pfam PF00682 HMGL-like 8 276 5.5E-55 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 SMART SM00917 371 507 1.5E-15 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 Gene3D G3DSA:3.20.20.70 5 349 6.8E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 PANTHER PTHR10277 4 507 3.8E-142 T 23-04-2016 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 SUPERFAMILY SSF110921 397 506 3.92E-17 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 PANTHER PTHR10277:SF9 4 507 3.8E-142 T 23-04-2016 NIAKO_RS13205 72fb2dd31dd87debcdf32c9217cb0e8e 507 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 506 2.1E-23 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 154 1.7E-53 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 4.0E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 155 29.14 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PANTHER PTHR21342 1 155 9.9E-61 T 23-04-2016 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PANTHER PTHR21342:SF1 1 155 9.9E-61 T 23-04-2016 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 SUPERFAMILY SSF52374 4 153 4.02E-42 T 23-04-2016 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 3 133 0.002 T 23-04-2016 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 Gene3D G3DSA:3.40.50.620 3 155 1.3E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 Pfam PF01467 Cytidylyltransferase-like 7 109 3.0E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 1.7E-38 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.7E-38 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.7E-38 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 1.7E-38 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS05750 4322cfd790e8adff6b5cefcf2e0704ff 155 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 1.7E-38 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NIAKO_RS01160 291dc2ea10a6158c50607b46b13b6a6e 465 Gene3D G3DSA:1.25.40.10 215 407 1.1E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01160 291dc2ea10a6158c50607b46b13b6a6e 465 Pfam PF07980 SusD family 348 420 1.3E-10 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS01160 291dc2ea10a6158c50607b46b13b6a6e 465 Pfam PF14322 Starch-binding associating with outer membrane 31 232 3.5E-39 T 23-04-2016 NIAKO_RS01160 291dc2ea10a6158c50607b46b13b6a6e 465 SUPERFAMILY SSF48452 27 464 1.03E-68 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 Pfam PF01120 Alpha-L-fucosidase 13 351 1.4E-93 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 PRINTS PR00741 Glycosyl hydrolase family 29 signature 338 360 5.0E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 PRINTS PR00741 Glycosyl hydrolase family 29 signature 97 113 5.0E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 PRINTS PR00741 Glycosyl hydrolase family 29 signature 305 326 5.0E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 SUPERFAMILY SSF51445 27 355 3.28E-99 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 SMART SM00812 21 398 2.1E-103 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 Gene3D G3DSA:3.20.20.80 23 355 7.0E-102 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 PIRSF PIRSF001092 2 446 9.5E-122 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17175 8904d17a484c59962cca92272232720f 447 PANTHER PTHR10030 31 356 9.1E-66 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS06500 6c7f0cbb91c97838df31f58b8558339e 354 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 329 1.1E-76 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NIAKO_RS06500 6c7f0cbb91c97838df31f58b8558339e 354 SUPERFAMILY SSF51395 1 353 1.28E-110 T 23-04-2016 NIAKO_RS06500 6c7f0cbb91c97838df31f58b8558339e 354 Gene3D G3DSA:3.20.20.70 1 353 4.6E-118 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS06500 6c7f0cbb91c97838df31f58b8558339e 354 PANTHER PTHR22893:SF14 1 354 9.9E-146 T 23-04-2016 NIAKO_RS06500 6c7f0cbb91c97838df31f58b8558339e 354 PANTHER PTHR22893 1 354 9.9E-146 T 23-04-2016 NIAKO_RS36880 dbb20cb35ff9d34761d0883609b2a1fd 235 Gene3D G3DSA:3.40.50.150 66 197 9.7E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS36880 dbb20cb35ff9d34761d0883609b2a1fd 235 SUPERFAMILY SSF53335 64 209 6.35E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS36880 dbb20cb35ff9d34761d0883609b2a1fd 235 PANTHER PTHR14614 69 195 4.7E-23 T 23-04-2016 NIAKO_RS36880 dbb20cb35ff9d34761d0883609b2a1fd 235 Pfam PF10294 Lysine methyltransferase 70 197 1.7E-15 T 23-04-2016 IPR019410 Lysine methyltransferase NIAKO_RS13880 585d55d7844f75a74f37095ef950899c 162 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 134 1.5E-9 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS13880 585d55d7844f75a74f37095ef950899c 162 Gene3D G3DSA:3.30.530.20 1 145 3.3E-16 T 23-04-2016 IPR023393 START-like domain NIAKO_RS13880 585d55d7844f75a74f37095ef950899c 162 SUPERFAMILY SSF55961 1 128 5.5E-16 T 23-04-2016 NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 SUPERFAMILY SSF101874 5 173 1.57E-47 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 SMART SM00867 5 172 1.5E-50 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 PANTHER PTHR34406:SF1 6 173 3.1E-42 T 23-04-2016 NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 Gene3D G3DSA:2.40.128.110 5 173 3.5E-49 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 Pfam PF04264 YceI-like domain 6 170 3.4E-38 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS08665 3eca896dd47a5761078954f0cd1c9ec8 174 PANTHER PTHR34406 6 173 3.1E-42 T 23-04-2016 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 Pfam PF08281 Sigma-70, region 4 94 144 1.4E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 SUPERFAMILY SSF88946 2 73 8.04E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 PANTHER PTHR30173 3 150 3.1E-26 T 23-04-2016 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 Gene3D G3DSA:1.10.10.10 93 151 1.2E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 149 8.6E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 Gene3D G3DSA:1.10.1740.10 2 67 7.5E-15 T 23-04-2016 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 SUPERFAMILY SSF88659 100 151 5.42E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01670 c359e1573134073f23070f8edba53cf2 162 Pfam PF04542 Sigma-70 region 2 2 64 2.0E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 PANTHER PTHR30173:SF20 1 178 1.3E-34 T 23-04-2016 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 SUPERFAMILY SSF88946 4 98 9.16E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 2.8E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 Pfam PF04542 Sigma-70 region 2 26 93 1.9E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 Pfam PF08281 Sigma-70, region 4 126 176 3.4E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 Gene3D G3DSA:1.10.1740.10 3 108 7.6E-17 T 23-04-2016 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 180 1.7E-40 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 PANTHER PTHR30173 1 178 1.3E-34 T 23-04-2016 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 SUPERFAMILY SSF88659 131 183 3.74E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01140 9b4eda5c24a17852f94d2290e6b6e6d5 198 Gene3D G3DSA:1.10.10.10 122 183 1.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 Gene3D G3DSA:1.10.1740.10 6 119 1.0E-20 T 23-04-2016 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 PANTHER PTHR30173 9 190 7.6E-47 T 23-04-2016 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 23 180 3.7E-43 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 SUPERFAMILY SSF88659 121 177 1.61E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 PANTHER PTHR30173:SF20 9 190 7.6E-47 T 23-04-2016 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 Pfam PF04542 Sigma-70 region 2 27 90 2.2E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 180 1.4E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 Pfam PF08281 Sigma-70, region 4 125 174 4.5E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 SUPERFAMILY SSF88946 2 99 1.33E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS31440 ebc35e0e54d0da7fa9c57b87270e9bd5 191 Gene3D G3DSA:1.10.10.10 120 181 3.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 SUPERFAMILY SSF88659 101 164 3.92E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 Pfam PF04542 Sigma-70 region 2 16 81 5.0E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 Pfam PF08281 Sigma-70, region 4 117 156 2.4E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 Gene3D G3DSA:1.10.1740.10 1 103 1.7E-15 T 23-04-2016 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 SUPERFAMILY SSF88946 2 93 4.32E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 PANTHER PTHR30173:SF20 1 174 2.3E-32 T 23-04-2016 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 Gene3D G3DSA:1.10.10.10 104 167 3.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 PANTHER PTHR30173 1 174 2.3E-32 T 23-04-2016 NIAKO_RS17465 9f0a8551d7dcc4970e9c9814f2b9f99f 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 165 2.5E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 PANTHER PTHR30388:SF4 3 285 9.2E-53 T 23-04-2016 NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 PANTHER PTHR30388 3 285 9.2E-53 T 23-04-2016 NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 Pfam PF04945 YHS domain 283 326 7.1E-14 T 23-04-2016 IPR007029 YHS domain NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 Pfam PF13478 XdhC Rossmann domain 116 251 3.3E-28 T 23-04-2016 IPR027051 XdhC Rossmann domain NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 Pfam PF02625 XdhC and CoxI family 14 76 5.7E-15 T 23-04-2016 IPR003777 XdhC- CoxI NIAKO_RS25330 f80ecb7feec3ebd7709ad949d21faa2c 332 SUPERFAMILY SSF47240 275 324 9.46E-9 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 37 322 4.8E-103 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 Gene3D G3DSA:3.40.718.10 3 332 5.2E-113 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 PANTHER PTHR30004:SF6 4 341 3.1E-129 T 23-04-2016 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 SUPERFAMILY SSF53659 7 331 7.68E-91 T 23-04-2016 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 329 28.769 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 10 325 2.2E-106 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS34095 8cfe01538d33373bd96502320eb671ba 366 PANTHER PTHR30004 4 341 3.1E-129 T 23-04-2016 NIAKO_RS24930 b7bada941cbda64fcb4462f26bcf4b48 329 PANTHER PTHR21064 1 281 6.7E-28 T 23-04-2016 NIAKO_RS24930 b7bada941cbda64fcb4462f26bcf4b48 329 Gene3D G3DSA:3.90.1200.10 116 326 2.0E-29 T 23-04-2016 NIAKO_RS24930 b7bada941cbda64fcb4462f26bcf4b48 329 SUPERFAMILY SSF56112 11 316 1.6E-48 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS24930 b7bada941cbda64fcb4462f26bcf4b48 329 Gene3D G3DSA:3.30.200.20 10 99 1.2E-9 T 23-04-2016 NIAKO_RS24930 b7bada941cbda64fcb4462f26bcf4b48 329 Pfam PF01636 Phosphotransferase enzyme family 38 265 1.1E-19 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 SUPERFAMILY SSF55486 153 316 2.46E-11 T 23-04-2016 NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 PANTHER PTHR19325:SF359 192 315 3.8E-17 T 23-04-2016 NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 PANTHER PTHR19325 192 315 3.8E-17 T 23-04-2016 NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 Pfam PF05572 Pregnancy-associated plasma protein-A 176 319 2.7E-20 T 23-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 SUPERFAMILY SSF49899 451 624 3.48E-5 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS13690 52e7fd7247999c51b510d0eb30289d78 715 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 638 715 1.2E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 Pfam PF00293 NUDIX domain 32 157 2.6E-8 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 SUPERFAMILY SSF55811 19 173 7.04E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 PANTHER PTHR22769 36 75 2.7E-17 T 23-04-2016 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 PANTHER PTHR22769 95 231 2.7E-17 T 23-04-2016 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 PANTHER PTHR22769:SF33 36 75 2.7E-17 T 23-04-2016 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 PANTHER PTHR22769:SF33 95 231 2.7E-17 T 23-04-2016 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 Gene3D G3DSA:1.10.10.10 186 252 2.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 Gene3D G3DSA:3.90.79.10 19 185 3.0E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS06915 1e2f7c4249df7df0ce7ede53f39b9f34 260 SUPERFAMILY SSF46785 180 249 1.12E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08855 4a04a876b6d0b3c1ba7b50500f871276 132 PANTHER PTHR37290 1 125 2.3E-60 T 23-04-2016 NIAKO_RS08855 4a04a876b6d0b3c1ba7b50500f871276 132 Pfam PF05360 yiaA/B two helix domain 72 124 2.4E-20 T 23-04-2016 IPR008024 YiaAB two helix NIAKO_RS08855 4a04a876b6d0b3c1ba7b50500f871276 132 Pfam PF05360 yiaA/B two helix domain 9 61 2.0E-22 T 23-04-2016 IPR008024 YiaAB two helix NIAKO_RS08855 4a04a876b6d0b3c1ba7b50500f871276 132 PANTHER PTHR37290:SF1 1 125 2.3E-60 T 23-04-2016 NIAKO_RS31990 b0d40b47d4f175e33c0d60bc33508162 318 SUPERFAMILY SSF53448 2 225 5.32E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31990 b0d40b47d4f175e33c0d60bc33508162 318 Pfam PF00535 Glycosyl transferase family 2 6 166 5.3E-31 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS31990 b0d40b47d4f175e33c0d60bc33508162 318 Gene3D G3DSA:3.90.550.10 2 167 9.5E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31990 b0d40b47d4f175e33c0d60bc33508162 318 PANTHER PTHR10859:SF86 3 306 4.1E-120 T 23-04-2016 NIAKO_RS31990 b0d40b47d4f175e33c0d60bc33508162 318 PANTHER PTHR10859 3 306 4.1E-120 T 23-04-2016 NIAKO_RS01785 8676d3017fdbe918f9987174f49e12da 172 Gene3D G3DSA:3.40.630.30 2 165 1.7E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01785 8676d3017fdbe918f9987174f49e12da 172 PANTHER PTHR23091 1 171 6.6E-77 T 23-04-2016 NIAKO_RS01785 8676d3017fdbe918f9987174f49e12da 172 SUPERFAMILY SSF55729 3 164 3.38E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01785 8676d3017fdbe918f9987174f49e12da 172 Pfam PF13420 Acetyltransferase (GNAT) domain 4 155 1.6E-24 T 23-04-2016 NIAKO_RS01785 8676d3017fdbe918f9987174f49e12da 172 PANTHER PTHR23091:SF187 1 171 6.6E-77 T 23-04-2016 NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 SMART SM00382 22 211 5.1E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 PANTHER PTHR24220:SF0 1 238 3.8E-106 T 23-04-2016 NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 Pfam PF00005 ABC transporter 14 156 5.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 Gene3D G3DSA:3.40.50.300 2 220 7.5E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 PANTHER PTHR24220 1 238 3.8E-106 T 23-04-2016 NIAKO_RS21915 82cd65625261732ee2898f01e6cb4fe0 238 SUPERFAMILY SSF52540 2 218 7.38E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.6E-17 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00097 Anthranilate synthase component II signature 3 17 1.6E-17 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.6E-17 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.6E-17 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.1E-7 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.1E-7 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 SUPERFAMILY SSF52317 146 231 1.95E-45 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 SUPERFAMILY SSF52317 1 100 1.95E-45 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PANTHER PTHR11922 146 231 2.9E-66 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PANTHER PTHR11922 1 109 2.9E-66 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 Pfam PF00117 Glutamine amidotransferase class-I 5 230 4.3E-43 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PANTHER PTHR11922:SF7 146 231 2.9E-66 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PANTHER PTHR11922:SF7 1 109 2.9E-66 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 Gene3D G3DSA:3.40.50.880 149 231 1.6E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 Gene3D G3DSA:3.40.50.880 1 106 1.6E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.7E-6 T 23-04-2016 NIAKO_RS01765 e7a8443bace77a623e70c37efd434983 232 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.7E-6 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532 349 412 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532 499 835 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532 852 1078 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532 2 309 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1080 2.8E-190 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.60.40.1120 31 110 5.1E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 SUPERFAMILY SSF49464 29 109 1.57E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532:SF57 349 412 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532:SF57 499 835 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532:SF57 852 1078 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 PANTHER PTHR11532:SF57 2 309 2.7E-168 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.40.170.20 230 251 5.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.40.170.20 991 1077 5.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.40.170.20 925 951 5.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.40.170.20 367 845 5.1E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 SUPERFAMILY SSF56935 916 961 2.88E-66 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 SUPERFAMILY SSF56935 1000 1077 2.88E-66 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 SUPERFAMILY SSF56935 358 827 2.88E-66 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 SUPERFAMILY SSF56935 107 251 2.88E-66 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Pfam PF13715 CarboxypepD_reg-like domain 31 111 2.4E-11 T 23-04-2016 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 203 233 1.4E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Gene3D G3DSA:2.170.130.10 111 229 2.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00190 e0c89a2390efca50c51b8db2535be245 1080 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 227 2.0E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01920 5ee9e01b597c49107e3bd48c5f1e2705 222 Gene3D G3DSA:3.40.50.1110 23 220 8.3E-42 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01920 5ee9e01b597c49107e3bd48c5f1e2705 222 PANTHER PTHR30383 1 222 2.1E-27 T 23-04-2016 NIAKO_RS01920 5ee9e01b597c49107e3bd48c5f1e2705 222 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 29 209 1.2E-28 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01920 5ee9e01b597c49107e3bd48c5f1e2705 222 SUPERFAMILY SSF52266 20 221 4.43E-41 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS01920 5ee9e01b597c49107e3bd48c5f1e2705 222 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 27 38 - T 23-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 NIAKO_RS09480 516c6c814fb5817ee25fe610fd05af76 149 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 9.8E-21 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS09480 516c6c814fb5817ee25fe610fd05af76 149 Gene3D G3DSA:1.20.1290.10 2 144 4.3E-51 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS09480 516c6c814fb5817ee25fe610fd05af76 149 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 1.2E-20 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS09480 516c6c814fb5817ee25fe610fd05af76 149 SUPERFAMILY SSF69118 6 144 7.2E-44 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 SUPERFAMILY SSF50156 514 577 2.28E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 PIRSF PIRSF016493 19 603 9.6E-112 T 23-04-2016 IPR024191 Peptidase M61 NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 Gene3D G3DSA:2.30.42.10 513 577 4.0E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 SUPERFAMILY SSF55486 204 337 1.35E-8 T 23-04-2016 NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 Pfam PF05299 M61 glycyl aminopeptidase 287 402 2.4E-29 T 23-04-2016 IPR007963 Peptidase M61, catalytic domain NIAKO_RS19405 599ef4eb7f1666a29d11e07ae9ce332e 609 Pfam PF13180 PDZ domain 514 572 1.7E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 329 5.3E-113 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 PANTHER PTHR30137 1 331 1.2E-122 T 23-04-2016 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 PANTHER PTHR30137:SF7 1 331 1.2E-122 T 23-04-2016 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 Pfam PF00296 Luciferase-like monooxygenase 7 300 2.1E-23 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 Gene3D G3DSA:3.20.20.30 4 329 1.9E-73 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS28910 77c57eaa2e7f5ccf571d7893103b3123 342 SUPERFAMILY SSF51679 3 329 2.62E-62 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294:SF20 278 308 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294:SF20 222 254 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294:SF20 1 203 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294 278 308 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294 222 254 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 PANTHER PTHR30294 1 203 3.2E-44 T 23-04-2016 NIAKO_RS21080 7a25f9aa566992830db1a91530cc0e58 309 Pfam PF12679 ABC-2 family transporter protein 2 306 2.6E-36 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 Pfam PF00117 Glutamine amidotransferase class-I 303 527 4.7E-57 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 Hamap MF_01227 CTP synthase [pyrG]. 2 533 49.204 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 Gene3D G3DSA:3.40.50.300 1 285 2.6E-130 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 PANTHER PTHR11550 1 529 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 Gene3D G3DSA:3.40.50.880 289 534 2.0E-97 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 Pfam PF06418 CTP synthase N-terminus 3 267 1.3E-122 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 2.3E-236 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 SUPERFAMILY SSF52540 1 268 1.81E-117 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23130 4a656f776c9dc804a0ad79d9bda15c20 549 SUPERFAMILY SSF52317 290 533 1.74E-79 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 PANTHER PTHR11019:SF123 27 290 3.0E-31 T 23-04-2016 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 SUPERFAMILY SSF46689 182 232 1.16E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 9.7E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 9.7E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 SMART SM00342 199 282 1.5E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 Gene3D G3DSA:1.10.10.60 184 235 4.6E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 SUPERFAMILY SSF46689 235 286 4.48E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 Gene3D G3DSA:1.10.10.60 236 286 1.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 Pfam PF12833 Helix-turn-helix domain 206 283 1.2E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06700 5ac2b14f18ba89d4ae7f3365a66ad261 294 PANTHER PTHR11019 27 290 3.0E-31 T 23-04-2016 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 SUPERFAMILY SSF111352 81 487 1.57E-98 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 Pfam PF00909 Ammonium Transporter Family 87 516 9.9E-105 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 TIGRFAM TIGR00836 amt: ammonium transporter 85 516 3.9E-112 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 PANTHER PTHR11730:SF6 57 516 5.5E-144 T 23-04-2016 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 ProSitePatterns PS01219 Ammonium transporters signature. 247 272 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 Gene3D G3DSA:1.10.3430.10 80 487 1.7E-111 T 23-04-2016 IPR029020 Ammonium/urea transporter NIAKO_RS00540 5f1fffc46f51703c9c5ba87f433c0b63 516 PANTHER PTHR11730 57 516 5.5E-144 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF47384 876 953 1.69E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF01339 CheB methylesterase 18 192 4.4E-55 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PRINTS PR00996 Glutamate methyltransferase family signature 417 431 1.4E-24 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PRINTS PR00996 Glutamate methyltransferase family signature 436 459 1.4E-24 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PRINTS PR00996 Glutamate methyltransferase family signature 238 251 1.4E-24 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PRINTS PR00996 Glutamate methyltransferase family signature 315 335 1.4E-24 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PRINTS PR00996 Glutamate methyltransferase family signature 351 367 1.4E-24 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF47757 215 284 1.83E-12 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:3.40.50.150 282 476 6.4E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SMART SM00091 735 802 0.0012 T 23-04-2016 IPR000014 PAS domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF03705 CheR methyltransferase, all-alpha domain 218 264 8.3E-12 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SMART SM00138 216 477 9.2E-78 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF01739 CheR methyltransferase, SAM binding domain 283 468 7.6E-54 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:3.30.450.20 728 849 6.0E-9 T 23-04-2016 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF53335 282 476 2.67E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF52738 12 196 1.18E-53 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF55785 723 849 7.85E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF00989 PAS fold 738 848 2.1E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:1.10.155.10 215 276 3.3E-10 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SUPERFAMILY SSF55874 947 1121 2.62E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:3.30.565.10 960 1121 4.0E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:3.40.50.180 9 197 1.0E-62 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF00512 His Kinase A (phospho-acceptor) domain 889 953 7.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SMART SM00388 889 957 3.9E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1001 1121 3.3E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 Gene3D G3DSA:1.10.287.130 883 953 1.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 SMART SM00387 997 1122 1.3E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PANTHER PTHR24422:SF6 105 758 8.5E-200 T 23-04-2016 NIAKO_RS00150 434de54d25670c089b532f26efecee3d 1122 PANTHER PTHR24422 105 758 8.5E-200 T 23-04-2016 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 Pfam PF13432 Tetratricopeptide repeat 31 77 0.0029 T 23-04-2016 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 SMART SM00028 96 129 0.095 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 SMART SM00028 130 163 1.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 SMART SM00028 25 58 2.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 Pfam PF00515 Tetratricopeptide repeat 132 161 8.3E-7 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 PANTHER PTHR23083 36 180 1.0E-24 T 23-04-2016 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 SUPERFAMILY SSF48452 29 179 7.49E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18685 983ad7531575ef6d6d6bb2a01d197cf4 349 Gene3D G3DSA:1.25.40.10 31 180 1.0E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 Pfam PF00005 ABC transporter 19 170 4.2E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 SMART SM00382 27 216 0.0013 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 PANTHER PTHR24220 4 203 1.6E-37 T 23-04-2016 NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 Gene3D G3DSA:3.40.50.300 5 208 9.9E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 SUPERFAMILY SSF52540 8 207 1.41E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34255 64d48e4f22be018ba8f0460a54b211c0 225 PANTHER PTHR24220:SF563 4 203 1.6E-37 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 PIRSF PIRSF000538 4 494 9.6E-134 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 255 4.6E-70 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 Gene3D G3DSA:3.30.420.40 258 492 2.1E-73 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 PANTHER PTHR10196 1 492 2.2E-187 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 SUPERFAMILY SSF53067 6 258 9.5E-79 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 453 1.6E-45 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 SUPERFAMILY SSF53067 258 490 3.02E-64 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 Gene3D G3DSA:3.30.420.40 2 256 1.3E-87 T 23-04-2016 NIAKO_RS00330 af1357de10f08ab398b8456a683fad7f 494 PANTHER PTHR10196:SF69 1 492 2.2E-187 T 23-04-2016 NIAKO_RS33305 caf32a6255a42bc62c2b9b897f25e257 409 PANTHER PTHR12526 30 407 1.4E-39 T 23-04-2016 NIAKO_RS33305 caf32a6255a42bc62c2b9b897f25e257 409 Pfam PF00534 Glycosyl transferases group 1 216 373 9.4E-29 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS33305 caf32a6255a42bc62c2b9b897f25e257 409 SUPERFAMILY SSF53756 16 406 2.69E-57 T 23-04-2016 NIAKO_RS33305 caf32a6255a42bc62c2b9b897f25e257 409 Gene3D G3DSA:3.40.50.2000 211 388 2.6E-22 T 23-04-2016 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Gene3D G3DSA:1.10.8.60 338 408 2.3E-12 T 23-04-2016 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 SUPERFAMILY SSF48452 6 123 1.25E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 198 328 9.3E-41 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Pfam PF14559 Tetratricopeptide repeat 7 53 1.1E-7 T 23-04-2016 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Gene3D G3DSA:3.40.50.300 157 337 2.7E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 SMART SM00382 194 331 4.2E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Gene3D G3DSA:1.25.40.10 5 121 6.2E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 SUPERFAMILY SSF52540 155 403 6.04E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 Pfam PF13181 Tetratricopeptide repeat 98 120 0.063 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 ProSitePatterns PS00674 AAA-protein family signature. 299 317 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 PANTHER PTHR23077:SF55 156 410 2.0E-86 T 23-04-2016 NIAKO_RS03380 cc474acfe31c18c32895e7a7d8458012 439 PANTHER PTHR23077 156 410 2.0E-86 T 23-04-2016 NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 393 412 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 414 431 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 239 250 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 Pfam PF00106 short chain dehydrogenase 162 257 1.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 SUPERFAMILY SSF51735 328 427 1.01E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 SUPERFAMILY SSF51735 157 256 1.01E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322:SF506 393 425 1.0E-57 T 23-04-2016 NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322:SF506 165 255 1.0E-57 T 23-04-2016 NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322:SF506 331 373 1.0E-57 T 23-04-2016 NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 Gene3D G3DSA:3.40.50.720 143 248 1.1E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 Gene3D G3DSA:3.40.50.720 323 430 1.1E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 333 428 6.2E-8 T 23-04-2016 NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322 393 425 1.0E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322 165 255 1.0E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29415 ea6fc0aca41b1fb2914d0a744836177e 485 PANTHER PTHR24322 331 373 1.0E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 Gene3D G3DSA:3.10.50.30 77 155 4.0E-25 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 PANTHER PTHR30437 1 155 1.6E-46 T 23-04-2016 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 SUPERFAMILY SSF46557 4 78 6.41E-21 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 2.3E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 PIRSF PIRSF006092 1 157 4.0E-46 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 27.596 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 156 3.3E-23 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 Gene3D G3DSA:1.10.287.180 4 75 2.7E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 SUPERFAMILY SSF54534 81 155 5.49E-18 T 23-04-2016 NIAKO_RS34115 4f0d088a397a1dc45c573541f7fd9ebd 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 3.2E-49 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 Pfam PF00589 Phage integrase family 215 370 1.3E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 Pfam PF13356 Domain of unknown function (DUF4102) 3 85 2.7E-15 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 PANTHER PTHR30629:SF3 1 389 1.2E-110 T 23-04-2016 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 Gene3D G3DSA:1.10.150.130 99 197 5.1E-13 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 SUPERFAMILY SSF56349 99 382 1.03E-47 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 PANTHER PTHR30629 1 389 1.2E-110 T 23-04-2016 NIAKO_RS30170 ddfb86de078213932f1ab54b5416dd0f 403 Gene3D G3DSA:1.10.443.10 215 371 6.0E-15 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PRINTS PR00134 Glycosyl hydrolase family 10 signature 101 113 1.6E-15 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PRINTS PR00134 Glycosyl hydrolase family 10 signature 149 160 1.6E-15 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PRINTS PR00134 Glycosyl hydrolase family 10 signature 195 206 1.6E-15 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PRINTS PR00134 Glycosyl hydrolase family 10 signature 223 235 1.6E-15 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 Pfam PF00331 Glycosyl hydrolase family 10 30 358 8.2E-114 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 SMART SM00633 70 358 2.3E-135 T 23-04-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 Gene3D G3DSA:3.20.20.80 31 358 3.9E-121 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 257 267 - T 23-04-2016 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PANTHER PTHR31490 34 268 1.6E-105 T 23-04-2016 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 PANTHER PTHR31490 287 358 1.6E-105 T 23-04-2016 NIAKO_RS03650 b2ba5354b085698b0eb9b6ac95107948 359 SUPERFAMILY SSF51445 27 358 1.51E-118 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 Gene3D G3DSA:3.30.420.40 214 369 1.9E-43 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 SUPERFAMILY SSF53067 87 389 1.5E-45 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 Pfam PF00480 ROK family 113 386 3.8E-48 T 23-04-2016 IPR000600 ROK family NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 PANTHER PTHR18964:SF123 53 270 9.2E-64 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 PANTHER PTHR18964:SF123 299 389 9.2E-64 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 SUPERFAMILY SSF46785 9 69 3.21E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 Gene3D G3DSA:3.30.420.40 72 213 6.7E-27 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 Gene3D G3DSA:1.10.10.10 10 69 7.1E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 PANTHER PTHR18964 53 270 9.2E-64 T 23-04-2016 NIAKO_RS28430 809c6eede5ba0aefb1ee6778c25cdbb0 406 PANTHER PTHR18964 299 389 9.2E-64 T 23-04-2016 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Gene3D G3DSA:4.10.1080.10 520 622 4.2E-19 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Pfam PF02412 Thrombospondin type 3 repeat 519 537 0.023 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Pfam PF02412 Thrombospondin type 3 repeat 576 593 0.0029 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Pfam PF02412 Thrombospondin type 3 repeat 605 622 0.0096 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 PANTHER PTHR30128 625 750 1.5E-43 T 23-04-2016 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 SUPERFAMILY SSF103647 516 623 6.54E-10 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Gene3D G3DSA:3.30.1330.60 631 750 1.9E-38 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 SUPERFAMILY SSF103088 630 749 3.4E-35 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 Pfam PF00691 OmpA family 649 744 2.8E-24 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 PRINTS PR01021 OMPA domain signature 680 695 3.8E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS37180 00625c90854c0764f5eca57558d590c5 753 PRINTS PR01021 OMPA domain signature 695 711 3.8E-7 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 Pfam PF00156 Phosphoribosyl transferase domain 70 153 1.2E-12 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 Gene3D G3DSA:3.40.50.2020 3 208 1.2E-53 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 179 2.7E-42 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 SUPERFAMILY SSF53271 10 208 4.53E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 PANTHER PTHR19278 1 205 3.0E-64 T 23-04-2016 NIAKO_RS05765 85d8a89ab1a73d9d21c1782b84307dd0 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 27.498 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 SUPERFAMILY SSF51735 5 248 4.6E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PANTHER PTHR24322 155 186 7.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PANTHER PTHR24322 11 139 7.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 Gene3D G3DSA:3.40.50.720 1 248 7.8E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.5E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33550 2ff13a4f77b23a22838503e8743a967b 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.4E-52 T 23-04-2016 NIAKO_RS26845 f76f74a428f886df52ed81e832f3b749 261 Pfam PF02230 Phospholipase/Carboxylesterase 50 248 9.4E-14 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 NIAKO_RS26845 f76f74a428f886df52ed81e832f3b749 261 PANTHER PTHR10655:SF24 34 259 9.5E-63 T 23-04-2016 NIAKO_RS26845 f76f74a428f886df52ed81e832f3b749 261 Gene3D G3DSA:3.40.50.1820 23 260 3.1E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26845 f76f74a428f886df52ed81e832f3b749 261 PANTHER PTHR10655 34 259 9.5E-63 T 23-04-2016 NIAKO_RS26845 f76f74a428f886df52ed81e832f3b749 261 SUPERFAMILY SSF53474 33 249 1.91E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 PANTHER PTHR22683 282 844 1.9E-173 T 23-04-2016 NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 Pfam PF01580 FtsK/SpoIIIE family 466 669 7.6E-48 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 39 201 1.6E-13 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 Gene3D G3DSA:3.40.50.300 439 733 1.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 SUPERFAMILY SSF46785 769 832 1.36E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 SUPERFAMILY SSF52540 437 739 4.98E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 SMART SM00843 768 833 9.3E-32 T 23-04-2016 IPR018541 FtsK gamma domain NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 Pfam PF09397 Ftsk gamma domain 770 830 1.1E-26 T 23-04-2016 IPR018541 FtsK gamma domain NIAKO_RS22275 d1b52fbb0251ea8a575a071e0528815c 844 PANTHER PTHR22683:SF41 282 844 1.9E-173 T 23-04-2016 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 SUPERFAMILY SSF51215 53 175 2.88E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 Gene3D G3DSA:1.10.10.60 219 251 2.9E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 SMART SM00342 217 300 1.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 Gene3D G3DSA:1.10.10.60 255 302 2.1E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 Pfam PF12833 Helix-turn-helix domain 223 301 3.1E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 Pfam PF02311 AraC-like ligand binding domain 53 153 1.1E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 PANTHER PTHR11019 27 303 4.0E-41 T 23-04-2016 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 PANTHER PTHR11019:SF50 27 303 4.0E-41 T 23-04-2016 NIAKO_RS04305 b6bc9e65669e740d5e0b14cff84963e3 304 SUPERFAMILY SSF46689 255 303 8.51E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PANTHER PTHR24322:SF551 11 192 2.7E-22 T 23-04-2016 NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 SUPERFAMILY SSF51735 1 259 1.23E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 8.3E-34 T 23-04-2016 NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 PANTHER PTHR24322 11 192 2.7E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08280 32ae0c10fc68fb48840cf04cefbb4c1e 263 Gene3D G3DSA:3.40.50.720 2 259 1.2E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12890 db65ef9cc939d6f8b2bc7f658c62ed8e 216 Gene3D G3DSA:1.10.3620.10 137 206 2.1E-4 T 23-04-2016 NIAKO_RS12890 db65ef9cc939d6f8b2bc7f658c62ed8e 216 PANTHER PTHR30336 1 216 2.5E-77 T 23-04-2016 NIAKO_RS12890 db65ef9cc939d6f8b2bc7f658c62ed8e 216 Gene3D G3DSA:3.40.50.620 17 136 9.7E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS12890 db65ef9cc939d6f8b2bc7f658c62ed8e 216 Pfam PF02698 DUF218 domain 27 148 2.4E-24 T 23-04-2016 IPR003848 Domain of unknown function DUF218 NIAKO_RS12890 db65ef9cc939d6f8b2bc7f658c62ed8e 216 PANTHER PTHR30336:SF5 1 216 2.5E-77 T 23-04-2016 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 SUPERFAMILY SSF51735 5 151 8.04E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 Pfam PF00742 Homoserine dehydrogenase 131 309 8.6E-47 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 PANTHER PTHR21499:SF2 1 309 3.0E-87 T 23-04-2016 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 13 123 1.5E-15 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 Gene3D G3DSA:3.30.360.10 143 294 3.9E-38 T 23-04-2016 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 PANTHER PTHR21499 1 309 3.0E-87 T 23-04-2016 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 177 199 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 SUPERFAMILY SSF55347 131 297 4.9E-38 T 23-04-2016 NIAKO_RS00565 696cf1ea6cc6bf737dade918156c809d 418 Gene3D G3DSA:3.40.50.720 3 142 7.0E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34080 6ea161ad75c8b419aae7b65a6d399771 318 SUPERFAMILY SSF56436 38 299 7.53E-58 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS34080 6ea161ad75c8b419aae7b65a6d399771 318 PANTHER PTHR23150 13 314 5.4E-57 T 23-04-2016 NIAKO_RS34080 6ea161ad75c8b419aae7b65a6d399771 318 PANTHER PTHR23150:SF19 13 314 5.4E-57 T 23-04-2016 NIAKO_RS34080 6ea161ad75c8b419aae7b65a6d399771 318 Gene3D G3DSA:3.90.1580.10 30 308 2.3E-60 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS34080 6ea161ad75c8b419aae7b65a6d399771 318 Pfam PF03781 Sulfatase-modifying factor enzyme 1 40 270 2.0E-47 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 702 28.333 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Gene3D G3DSA:3.30.230.70 4 227 1.3E-75 T 23-04-2016 IPR027408 PNPase/RNase PH domain NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Gene3D G3DSA:3.30.230.70 319 548 4.1E-83 T 23-04-2016 IPR027408 PNPase/RNase PH domain NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF00013 KH domain 561 620 1.3E-11 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Gene3D G3DSA:1.10.10.400 233 318 1.2E-23 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF46915 233 330 7.06E-21 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 PANTHER PTHR11252:SF0 4 712 0.0 T 23-04-2016 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 PIRSF PIRSF005499 4 713 2.8E-274 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SMART SM00316 628 699 1.7E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF00575 S1 RNA binding domain 627 699 8.5E-17 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Gene3D G3DSA:3.30.1370.10 556 627 8.2E-22 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF03725 3' exoribonuclease family, domain 2 151 213 1.3E-10 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF54791 557 636 8.63E-16 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF54211 14 146 2.53E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF01138 3' exoribonuclease family, domain 1 16 146 2.3E-21 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF01138 3' exoribonuclease family, domain 1 327 459 2.7E-23 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 324 5.6E-13 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 Gene3D G3DSA:2.40.50.140 628 700 6.9E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 14 699 5.4E-277 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 PANTHER PTHR11252 4 712 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF55666 140 229 2.88E-21 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SMART SM00322 557 625 1.0E-12 T 23-04-2016 IPR004087 K Homology domain GO:0003676 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF50249 618 703 2.14E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF55666 453 553 5.37E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NIAKO_RS12980 73193ee5736f21a7dc8bfecfceac8d27 714 SUPERFAMILY SSF54211 298 493 9.62E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS29635 41e74288fd7758b9b8ce4ab07e074462 346 PANTHER PTHR21091 1 332 6.3E-162 T 23-04-2016 NIAKO_RS29635 41e74288fd7758b9b8ce4ab07e074462 346 Gene3D G3DSA:3.20.20.330 1 345 1.3E-120 T 23-04-2016 IPR003726 Homocysteine-binding domain NIAKO_RS29635 41e74288fd7758b9b8ce4ab07e074462 346 SUPERFAMILY SSF82282 2 343 1.7E-106 T 23-04-2016 IPR003726 Homocysteine-binding domain NIAKO_RS29635 41e74288fd7758b9b8ce4ab07e074462 346 PANTHER PTHR21091:SF112 1 332 6.3E-162 T 23-04-2016 NIAKO_RS29635 41e74288fd7758b9b8ce4ab07e074462 346 Pfam PF02574 Homocysteine S-methyltransferase 13 330 2.2E-96 T 23-04-2016 IPR003726 Homocysteine-binding domain NIAKO_RS16340 ad72050ff9150d1c6737bb1d76b59a7d 147 SUPERFAMILY SSF109854 3 138 7.94E-12 T 23-04-2016 NIAKO_RS16340 ad72050ff9150d1c6737bb1d76b59a7d 147 Gene3D G3DSA:1.20.120.450 25 133 5.8E-8 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS16340 ad72050ff9150d1c6737bb1d76b59a7d 147 Pfam PF12867 DinB superfamily 4 125 2.2E-7 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 PANTHER PTHR30108 1 490 6.4E-158 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 Gene3D G3DSA:3.40.1670.10 343 450 3.0E-29 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 Gene3D G3DSA:3.40.1670.10 474 592 5.9E-14 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 SUPERFAMILY SSF50475 3 321 1.1E-98 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 9 445 1.1E-178 T 23-04-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 SUPERFAMILY SSF143968 322 465 9.02E-38 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 PANTHER PTHR30108:SF1 1 490 6.4E-158 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 SUPERFAMILY SSF143968 470 617 9.15E-19 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 7 452 1.9E-124 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 Gene3D G3DSA:1.20.5.570 593 617 3.4E-6 T 23-04-2016 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 427 1.2E-150 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 NIAKO_RS07675 315ac23aed8a57d3d85dba1391e10a82 640 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 563 1.2E-8 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 SUPERFAMILY SSF82544 2 437 3.79E-131 T 23-04-2016 NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 Pfam PF05161 MOFRL family 321 431 8.4E-38 T 23-04-2016 IPR007835 MOFRL domain NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 Gene3D G3DSA:3.40.1480.10 258 437 3.1E-65 T 23-04-2016 IPR007835 MOFRL domain NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 Gene3D G3DSA:3.40.50.10180 5 257 3.2E-88 T 23-04-2016 NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 Pfam PF13660 Domain of unknown function (DUF4147) 5 243 3.9E-77 T 23-04-2016 IPR025286 MOFRL-associated domain NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 PANTHER PTHR12227 1 437 1.8E-158 T 23-04-2016 NIAKO_RS36075 fa870bf41b28b3e7e07e369eddc90dcd 438 PANTHER PTHR12227:SF0 1 437 1.8E-158 T 23-04-2016 NIAKO_RS37400 a076c2b6ef214d021d4f27847dcd654c 157 Pfam PF02276 Photosynthetic reaction centre cytochrome C subunit 24 129 2.0E-10 T 23-04-2016 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 NIAKO_RS37400 a076c2b6ef214d021d4f27847dcd654c 157 Gene3D G3DSA:1.10.468.10 25 134 1.2E-25 T 23-04-2016 IPR023119 Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like NIAKO_RS37400 a076c2b6ef214d021d4f27847dcd654c 157 SUPERFAMILY SSF48695 8 131 8.78E-18 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS21145 69492527addf80184847ba209b68fe1a 144 SUPERFAMILY SSF49764 15 135 7.85E-37 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS21145 69492527addf80184847ba209b68fe1a 144 PANTHER PTHR11527:SF122 16 144 4.2E-35 T 23-04-2016 NIAKO_RS21145 69492527addf80184847ba209b68fe1a 144 Gene3D G3DSA:2.60.40.790 4 143 6.2E-41 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS21145 69492527addf80184847ba209b68fe1a 144 PANTHER PTHR11527 16 144 4.2E-35 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS21145 69492527addf80184847ba209b68fe1a 144 Pfam PF00011 Hsp20/alpha crystallin family 41 143 3.8E-26 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS10250 724ea5287d517346f57aef42c43c0595 230 Gene3D G3DSA:3.90.420.10 51 228 3.6E-51 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NIAKO_RS10250 724ea5287d517346f57aef42c43c0595 230 PANTHER PTHR19372 48 230 1.0E-61 T 23-04-2016 NIAKO_RS10250 724ea5287d517346f57aef42c43c0595 230 SUPERFAMILY SSF56524 42 230 1.05E-58 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NIAKO_RS10250 724ea5287d517346f57aef42c43c0595 230 Pfam PF00174 Oxidoreductase molybdopterin binding domain 71 212 2.7E-35 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 SUPERFAMILY SSF46785 16 74 1.35E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 SMART SM00344 17 126 6.3E-37 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 PANTHER PTHR30154 9 165 9.3E-52 T 23-04-2016 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 Gene3D G3DSA:1.10.10.10 12 67 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 17 64 3.0E-17 T 23-04-2016 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 Gene3D G3DSA:3.30.70.920 70 164 2.2E-25 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 Pfam PF01037 Lrp/AsnC ligand binding domain 85 155 1.2E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 PANTHER PTHR30154:SF28 9 165 9.3E-52 T 23-04-2016 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 44 8.7E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 44 63 8.7E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 33 8.7E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NIAKO_RS33495 d4f91958428857f819fb3c0fcec5901d 165 SUPERFAMILY SSF54909 81 162 6.57E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 73 135 5.5E-15 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 865 924 2.6E-9 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 257 319 4.9E-13 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 481 526 1.2E-9 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 746 817 6.9E-11 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 146 191 9.3E-7 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Gene3D G3DSA:2.130.10.130 481 537 2.2E-31 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Gene3D G3DSA:2.130.10.130 687 928 1.4E-27 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Gene3D G3DSA:2.130.10.130 158 367 2.2E-31 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Gene3D G3DSA:2.130.10.130 400 439 2.2E-31 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 1025 1082 8.76E-7 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 402 549 6.54E-59 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 666 929 6.54E-59 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 Pfam PF07593 ASPIC and UnbV 565 631 7.1E-19 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026 391 488 2.3E-30 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026 507 669 2.3E-30 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026 65 332 2.3E-30 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 476 536 2.09E-69 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 58 367 2.09E-69 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 400 440 2.09E-69 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 SUPERFAMILY SSF69318 940 971 8.76E-7 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026:SF0 391 488 2.3E-30 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026:SF0 507 669 2.3E-30 T 23-04-2016 NIAKO_RS06065 a2e8b6935d461ae9e0691ffe3cd228c2 1145 PANTHER PTHR16026:SF0 65 332 2.3E-30 T 23-04-2016 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 SUPERFAMILY SSF54373 408 516 1.18E-12 T 23-04-2016 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Pfam PF00732 GMC oxidoreductase 13 305 8.6E-12 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 SUPERFAMILY SSF51905 11 65 3.78E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 SUPERFAMILY SSF51905 515 576 3.78E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 SUPERFAMILY SSF51905 94 322 3.78E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Gene3D G3DSA:3.50.50.60 447 460 2.5E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Gene3D G3DSA:3.50.50.60 506 574 2.5E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Gene3D G3DSA:3.50.50.60 11 154 2.5E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Gene3D G3DSA:3.50.50.60 222 330 2.5E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 PANTHER PTHR11552 14 577 4.5E-63 T 23-04-2016 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 Pfam PF05199 GMC oxidoreductase 450 567 3.5E-16 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 NIAKO_RS12925 38ff25551eadc4b363adf93e8cce9d3e 580 PANTHER PTHR11552:SF139 14 577 4.5E-63 T 23-04-2016 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 SUPERFAMILY SSF55874 316 477 2.75E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 SMART SM00387 365 478 2.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PANTHER PTHR24423 105 120 1.9E-47 T 23-04-2016 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PANTHER PTHR24423 249 476 1.9E-47 T 23-04-2016 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 Gene3D G3DSA:3.30.565.10 304 480 2.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 9.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 9.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 9.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 9.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 476 6.2E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 SUPERFAMILY SSF47384 238 315 5.49E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 Gene3D G3DSA:1.10.287.130 244 303 7.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 SMART SM00388 251 319 3.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08585 0badf57128931db5677ade25c343fdef 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 315 7.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09365 b7b4d845e06d39cff4115acab374d5ad 419 Pfam PF12704 MacB-like periplasmic core domain 21 257 4.7E-19 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS09365 b7b4d845e06d39cff4115acab374d5ad 419 Pfam PF02687 FtsX-like permease family 290 413 8.0E-24 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS09365 b7b4d845e06d39cff4115acab374d5ad 419 PANTHER PTHR30489 90 419 1.2E-46 T 23-04-2016 NIAKO_RS09365 b7b4d845e06d39cff4115acab374d5ad 419 PANTHER PTHR30489 18 62 1.2E-46 T 23-04-2016 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 Pfam PF02311 AraC-like ligand binding domain 37 89 9.2E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 Gene3D G3DSA:1.10.10.60 244 290 7.9E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 SMART SM00342 204 288 3.8E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 SUPERFAMILY SSF51215 38 172 5.36E-15 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 Gene3D G3DSA:2.60.120.280 31 166 7.3E-17 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 Pfam PF12833 Helix-turn-helix domain 211 290 4.7E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 PANTHER PTHR11019:SF45 35 296 4.5E-35 T 23-04-2016 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 PANTHER PTHR11019 35 296 4.5E-35 T 23-04-2016 NIAKO_RS21060 1f66c53218d8d9e0dac627de9eaee5d7 296 SUPERFAMILY SSF46689 244 291 2.73E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Gene3D G3DSA:2.40.110.10 121 220 6.9E-40 T 23-04-2016 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Gene3D G3DSA:1.20.140.10 221 379 3.3E-68 T 23-04-2016 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 1.0E-48 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 PANTHER PTHR10909 1 379 5.9E-170 T 23-04-2016 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 8.9E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 118 1.3E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 PANTHER PTHR10909:SF305 1 379 5.9E-170 T 23-04-2016 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 Gene3D G3DSA:1.10.540.10 1 119 6.0E-43 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 PIRSF PIRSF016578 3 378 1.9E-20 T 23-04-2016 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 SUPERFAMILY SSF47203 228 379 2.9E-55 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS34310 1f5cc00f558b38fda323cc027497d26b 380 SUPERFAMILY SSF56645 2 242 2.62E-85 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 PANTHER PTHR30404:SF0 200 335 5.1E-22 T 23-04-2016 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 PANTHER PTHR30404:SF0 36 171 5.1E-22 T 23-04-2016 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 PANTHER PTHR30404 200 335 5.1E-22 T 23-04-2016 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 PANTHER PTHR30404 36 171 5.1E-22 T 23-04-2016 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 Gene3D G3DSA:3.40.630.40 36 126 2.4E-42 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 Gene3D G3DSA:3.40.630.40 169 182 2.4E-42 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 Gene3D G3DSA:3.40.630.40 239 315 2.4E-42 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 SMART SM00646 105 313 5.7E-9 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 37 313 8.0E-37 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 SUPERFAMILY SSF53187 238 316 8.48E-34 T 23-04-2016 NIAKO_RS06025 446c703514222dd27d50da2e8c75ecf6 341 SUPERFAMILY SSF53187 36 140 8.48E-34 T 23-04-2016 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 PANTHER PTHR10849:SF13 1 171 1.5E-71 T 23-04-2016 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 Pfam PF12838 4Fe-4S dicluster domain 50 103 6.2E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 132 27.057 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 PANTHER PTHR10849 1 171 1.5E-71 T 23-04-2016 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 8 128 5.8E-49 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 SUPERFAMILY SSF54862 24 135 1.13E-26 T 23-04-2016 NIAKO_RS14560 2cfbd3b857210dd6cb92b291d380302f 171 Gene3D G3DSA:3.30.70.20 18 107 9.5E-18 T 23-04-2016 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Gene3D G3DSA:2.60.40.320 202 309 6.6E-23 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 SUPERFAMILY SSF51445 305 590 1.21E-60 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 PANTHER PTHR10066:SF44 28 611 2.9E-255 T 23-04-2016 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 SUPERFAMILY SSF49303 215 309 2.22E-13 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Gene3D G3DSA:3.20.20.80 321 589 2.5E-50 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Gene3D G3DSA:2.60.120.260 42 201 2.5E-57 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 SUPERFAMILY SSF49785 41 213 7.79E-51 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 481 1.5E-8 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 102 178 8.3E-16 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 Pfam PF00703 Glycosyl hydrolases family 2 215 308 5.3E-10 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS24505 7b3aef4641374dcda354b5b13fc82aa5 614 PANTHER PTHR10066 28 611 2.9E-255 T 23-04-2016 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 325 32.222 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Gene3D G3DSA:3.40.50.20 2 104 2.2E-21 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Gene3D G3DSA:3.30.470.20 196 325 8.4E-40 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Gene3D G3DSA:3.30.470.20 106 123 8.4E-40 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 PANTHER PTHR23132 1 327 1.6E-69 T 23-04-2016 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 324 2.9E-80 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Gene3D G3DSA:3.30.1490.20 127 195 9.8E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 SUPERFAMILY SSF52440 1 115 2.78E-26 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Pfam PF01820 D-ala D-ala ligase N-terminus 4 106 2.3E-20 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 Pfam PF07478 D-ala D-ala ligase C-terminus 128 322 2.3E-50 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 SUPERFAMILY SSF56059 116 329 4.95E-46 T 23-04-2016 NIAKO_RS01575 35073b355221c38c7a77446dbf8f0762 331 PIRSF PIRSF039102 1 331 1.9E-86 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 Gene3D G3DSA:3.40.50.280 176 239 1.9E-7 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.6E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 SUPERFAMILY SSF46955 4 71 1.37E-14 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 PANTHER PTHR30204 1 112 3.3E-12 T 23-04-2016 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 SMART SM00422 4 73 3.4E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 PANTHER PTHR30204:SF19 1 112 3.3E-12 T 23-04-2016 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 Pfam PF02607 B12 binding domain 97 164 7.2E-7 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 Gene3D G3DSA:1.10.1660.10 4 69 6.1E-14 T 23-04-2016 NIAKO_RS06135 3510790f3b448c865b1b77ce44a1edd3 293 SUPERFAMILY SSF52242 175 241 7.69E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 Pfam PF08281 Sigma-70, region 4 123 174 7.3E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 SUPERFAMILY SSF88946 3 95 9.02E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 5.3E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 PANTHER PTHR30173 1 178 2.4E-25 T 23-04-2016 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 SUPERFAMILY SSF88659 118 178 2.06E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 Gene3D G3DSA:1.10.1740.10 4 94 1.0E-15 T 23-04-2016 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 Pfam PF04542 Sigma-70 region 2 25 89 4.1E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35765 a29b1f2da5317c3d3ee6cae63bc3498b 186 Gene3D G3DSA:1.10.10.10 117 178 8.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24630 17cf7a522abfc57e695b4d1395e1642e 468 Pfam PF12771 Starch-binding associating with outer membrane 333 458 2.7E-9 T 23-04-2016 NIAKO_RS24630 17cf7a522abfc57e695b4d1395e1642e 468 Pfam PF12771 Starch-binding associating with outer membrane 6 298 1.7E-26 T 23-04-2016 NIAKO_RS24630 17cf7a522abfc57e695b4d1395e1642e 468 SUPERFAMILY SSF48452 18 467 6.83E-108 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24630 17cf7a522abfc57e695b4d1395e1642e 468 PANTHER PTHR35148 1 467 4.5E-46 T 23-04-2016 NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 SUPERFAMILY SSF48452 192 335 4.55E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 Pfam PF06580 Histidine kinase 417 494 1.6E-16 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 Gene3D G3DSA:3.30.565.10 470 566 2.2E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 Gene3D G3DSA:1.25.40.10 73 326 1.1E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 SUPERFAMILY SSF55874 471 564 8.7E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11885 a318daa45747c8888113f4a8079b5595 635 PANTHER PTHR34220 382 618 2.0E-29 T 23-04-2016 NIAKO_RS37225 ddcb9164a49c6a4a000c435f2fc157e9 325 Pfam PF04773 FecR protein 126 207 2.5E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS37225 ddcb9164a49c6a4a000c435f2fc157e9 325 Pfam PF16344 Domain of unknown function (DUF4974) 223 320 4.6E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS37225 ddcb9164a49c6a4a000c435f2fc157e9 325 PANTHER PTHR30273:SF2 1 325 9.1E-60 T 23-04-2016 NIAKO_RS37225 ddcb9164a49c6a4a000c435f2fc157e9 325 PIRSF PIRSF018266 2 325 2.4E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS37225 ddcb9164a49c6a4a000c435f2fc157e9 325 PANTHER PTHR30273 1 325 9.1E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PRINTS PR00762 Chloride channel signature 389 405 1.0E-18 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PRINTS PR00762 Chloride channel signature 140 159 1.0E-18 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PRINTS PR00762 Chloride channel signature 407 426 1.0E-18 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PRINTS PR00762 Chloride channel signature 191 210 1.0E-18 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PRINTS PR00762 Chloride channel signature 354 374 1.0E-18 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 SUPERFAMILY SSF81340 36 459 1.7E-93 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PANTHER PTHR11689:SF14 90 596 8.6E-67 T 23-04-2016 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 Pfam PF00571 CBS domain 541 588 4.0E-6 T 23-04-2016 IPR000644 CBS domain NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 Pfam PF00654 Voltage gated chloride channel 97 438 4.4E-73 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 Gene3D G3DSA:3.10.580.10 467 596 1.2E-14 T 23-04-2016 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 PANTHER PTHR11689 90 596 8.6E-67 T 23-04-2016 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 SMART SM00116 542 591 0.0036 T 23-04-2016 IPR000644 CBS domain NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 SUPERFAMILY SSF54631 465 588 3.9E-17 T 23-04-2016 NIAKO_RS29340 d6574b7e758f1ab172a98693b11c93f3 633 Gene3D G3DSA:1.10.3080.10 35 458 1.8E-71 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS05120 b606f4623c19825935885399095868f9 340 PANTHER PTHR30137 1 340 1.4E-212 T 23-04-2016 NIAKO_RS05120 b606f4623c19825935885399095868f9 340 Pfam PF00296 Luciferase-like monooxygenase 13 251 7.0E-24 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS05120 b606f4623c19825935885399095868f9 340 SUPERFAMILY SSF51679 8 333 2.62E-50 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS05120 b606f4623c19825935885399095868f9 340 Gene3D G3DSA:3.20.20.30 5 340 3.5E-53 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NIAKO_RS05120 b606f4623c19825935885399095868f9 340 PANTHER PTHR30137:SF3 1 340 1.4E-212 T 23-04-2016 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Gene3D G3DSA:2.130.10.10 239 347 5.4E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Pfam PF07676 WD40-like Beta Propeller Repeat 318 344 7.2E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Pfam PF13620 Carboxypeptidase regulatory-like domain 464 533 4.7E-9 T 23-04-2016 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 PRINTS PR01021 OMPA domain signature 613 629 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 PRINTS PR01021 OMPA domain signature 568 590 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 PRINTS PR01021 OMPA domain signature 598 613 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Gene3D G3DSA:1.25.40.10 40 157 6.4E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 SUPERFAMILY SSF103088 560 672 4.58E-25 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 SUPERFAMILY SSF49478 464 536 1.65E-9 T 23-04-2016 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Gene3D G3DSA:3.30.1330.60 566 674 3.6E-27 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Pfam PF00691 OmpA family 567 667 7.3E-18 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 Gene3D G3DSA:2.60.40.10 465 536 1.3E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 SUPERFAMILY SSF48452 40 167 3.59E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15905 2ce194e6c71c07af78780ed5fe32d0ae 676 PANTHER PTHR30128 532 673 1.1E-28 T 23-04-2016 NIAKO_RS09100 26a5e15d904fd089e19a091800288fd7 690 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 611 685 7.4E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 PANTHER PTHR37937 53 525 1.3E-15 T 23-04-2016 NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 154 581 8.1E-64 T 23-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 PANTHER PTHR37937:SF1 53 525 1.3E-15 T 23-04-2016 NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 Gene3D G3DSA:3.40.50.300 396 575 1.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 Gene3D G3DSA:3.40.50.300 150 258 1.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30130 7ae6412f923774071f7eee3d8ace2750 589 SUPERFAMILY SSF52540 149 582 2.23E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33245 b9a174cb4dcfea18f9c8dbb429f02b7d 138 Gene3D G3DSA:2.60.120.10 43 121 3.4E-4 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS33245 b9a174cb4dcfea18f9c8dbb429f02b7d 138 Pfam PF05523 WxcM-like, C-terminal 11 135 1.1E-48 T 23-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 NIAKO_RS33245 b9a174cb4dcfea18f9c8dbb429f02b7d 138 SUPERFAMILY SSF51182 10 136 1.31E-38 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 PANTHER PTHR10342:SF199 11 499 1.0E-148 T 23-04-2016 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 PANTHER PTHR10342 11 499 1.0E-148 T 23-04-2016 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 Gene3D G3DSA:3.40.720.10 44 377 6.3E-112 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 Pfam PF14707 C-terminal region of aryl-sulfatase 391 482 4.5E-9 T 23-04-2016 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 Pfam PF00884 Sulfatase 45 362 1.5E-74 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 SUPERFAMILY SSF53649 45 482 5.5E-127 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18485 913e377f2619450bc036ecd6c55b4e44 499 Gene3D G3DSA:3.30.1120.10 378 479 1.2E-21 T 23-04-2016 NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 SUPERFAMILY SSF54556 261 324 3.92E-10 T 23-04-2016 IPR029070 Chitinase insertion domain NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 Pfam PF00704 Glycosyl hydrolases family 18 36 353 1.4E-68 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 SUPERFAMILY SSF51445 35 261 6.32E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 SUPERFAMILY SSF51445 325 359 6.32E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 Gene3D G3DSA:3.10.50.10 263 327 5.2E-13 T 23-04-2016 IPR029070 Chitinase insertion domain NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 PANTHER PTHR11177 1 366 7.0E-89 T 23-04-2016 NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 Gene3D G3DSA:3.20.20.80 330 366 1.6E-72 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 Gene3D G3DSA:3.20.20.80 12 262 1.6E-72 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS21955 5706dbadfbd68e76db75291e7869026f 373 SMART SM00636 34 353 7.1E-72 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 NIAKO_RS11950 fe405d358f3d89689bb1f698383c8f9d 191 Pfam PF09357 RteC protein 67 181 5.4E-7 T 23-04-2016 IPR018534 Tetracycline regulation of excision, RteC NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 Pfam PF16864 Dimerisation domain 17 101 2.3E-17 T 23-04-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 PANTHER PTHR11746 1 348 1.3E-67 T 23-04-2016 NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 PANTHER PTHR11746:SF63 1 348 1.3E-67 T 23-04-2016 NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 Gene3D G3DSA:1.10.10.10 11 94 2.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 PIRSF PIRSF005739 2 348 1.3E-35 T 23-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 Gene3D G3DSA:3.40.50.150 101 348 1.1E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 SUPERFAMILY SSF46785 15 97 2.88E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 SUPERFAMILY SSF53335 101 345 8.88E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25455 644a7eccaca1c7e145ad4473462c9c8f 348 Pfam PF00891 O-methyltransferase 110 334 4.3E-40 T 23-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 NIAKO_RS26760 e3befec4b2ef193773930ca179e2b775 160 Pfam PF08922 Domain of unknown function (DUF1905) 4 83 2.0E-5 T 23-04-2016 IPR015018 Protein of unknown function DUF1905 NIAKO_RS26760 e3befec4b2ef193773930ca179e2b775 160 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 97 146 7.1E-11 T 23-04-2016 NIAKO_RS26760 e3befec4b2ef193773930ca179e2b775 160 SUPERFAMILY SSF141694 1 85 1.41E-7 T 23-04-2016 NIAKO_RS19415 b9ff0d4716317a623b4d9792e39960c7 343 SUPERFAMILY SSF56235 39 336 2.54E-87 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS19415 b9ff0d4716317a623b4d9792e39960c7 343 PANTHER PTHR10188:SF23 23 328 2.1E-154 T 23-04-2016 NIAKO_RS19415 b9ff0d4716317a623b4d9792e39960c7 343 Pfam PF01112 Asparaginase 51 335 2.2E-82 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 NIAKO_RS19415 b9ff0d4716317a623b4d9792e39960c7 343 PANTHER PTHR10188 23 328 2.1E-154 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.60.40.1120 58 150 1.5E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.170.130.10 151 284 2.9E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.40.170.20 873 926 6.4E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.40.170.20 495 836 6.4E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.40.170.20 976 1075 6.4E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.40.170.20 285 305 6.4E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Gene3D G3DSA:2.40.170.20 382 457 6.4E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 284 2.6E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532 12 231 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532 251 448 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532 569 1074 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532 500 541 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF56935 373 461 5.13E-82 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF56935 500 836 5.13E-82 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF56935 144 307 5.13E-82 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF56935 893 936 5.13E-82 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF56935 984 1074 5.13E-82 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532:SF51 500 541 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 SUPERFAMILY SSF49464 59 157 1.44E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 59 1076 1.1E-172 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Pfam PF13715 CarboxypepD_reg-like domain 59 148 1.5E-9 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 Pfam PF00593 TonB dependent receptor 671 1074 2.6E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 260 290 2.1E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532:SF51 12 231 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532:SF51 251 448 2.3E-182 T 23-04-2016 NIAKO_RS35715 0751f00f4e57822f3dcca0c47c8a996c 1076 PANTHER PTHR11532:SF51 569 1074 2.3E-182 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00387 1565 1690 3.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:3.40.50.2300 1878 1984 1.3E-18 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:3.40.50.2300 1756 1874 7.2E-17 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF55781 1197 1372 3.26E-28 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF13185 GAF domain 1232 1372 2.4E-18 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 421 473 1.9E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 789 841 6.0E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 973 1025 6.3E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 1065 1117 1.4E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 697 749 8.6E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 1157 1209 1.8E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 513 565 3.8E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 140 197 2.3 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 881 933 4.5E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 329 381 1.5E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 237 289 3.6E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00304 605 657 1.6E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF47384 1436 1518 3.92E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF58104 349 623 7.32E-20 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF52172 2024 2144 4.7E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PANTHER PTHR24423 2012 2144 1.2E-131 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PANTHER PTHR24423 1448 1693 1.2E-131 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PANTHER PTHR24423 35 79 1.2E-131 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PANTHER PTHR24423 1394 1412 1.2E-131 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF00072 Response regulator receiver domain 2027 2139 7.6E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF00072 Response regulator receiver domain 1760 1866 6.5E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF00072 Response regulator receiver domain 1882 1982 4.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00448 2025 2140 8.9E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00448 1880 1994 1.4E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00448 1758 1868 2.8E-4 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:1.10.287.130 1442 1514 5.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1451 1518 3.3E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00065 1233 1382 0.0016 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF58104 993 1172 6.54E-11 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF52172 1881 1964 1.57E-16 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1566 1688 2.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SMART SM00388 1450 1518 2.3E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:3.40.50.2300 2024 2144 1.6E-40 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF55874 1507 1688 1.96E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF58104 174 346 2.54E-9 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF58104 625 804 3.66E-15 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF58104 809 989 4.32E-14 T 23-04-2016 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1674 1687 5.3E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1615 1629 5.3E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1633 1643 5.3E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1650 1668 5.3E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:3.30.450.40 1219 1384 1.5E-16 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 Gene3D G3DSA:3.30.565.10 1526 1688 3.9E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19450 cd48076f75096f074cc359fe071b0b16 2146 SUPERFAMILY SSF52172 1757 1872 8.82E-17 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS01935 3c4dc6195c9730c4e56821b0fa969a20 256 PANTHER PTHR39330 11 246 3.5E-85 T 23-04-2016 NIAKO_RS01935 3c4dc6195c9730c4e56821b0fa969a20 256 PIRSF PIRSF018982 2 254 6.3E-84 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 NIAKO_RS01935 3c4dc6195c9730c4e56821b0fa969a20 256 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 11 245 1.6E-89 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 Gene3D G3DSA:1.10.10.10 120 178 8.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 178 3.8E-40 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 Pfam PF04542 Sigma-70 region 2 28 93 2.9E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 178 4.4E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 PANTHER PTHR30173 2 195 1.5E-37 T 23-04-2016 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 PANTHER PTHR30173:SF20 2 195 1.5E-37 T 23-04-2016 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 Pfam PF08281 Sigma-70, region 4 124 174 4.0E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 SUPERFAMILY SSF88946 5 104 1.45E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 49 80 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 SUPERFAMILY SSF88659 113 178 4.36E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35135 796afc075dd8ec70c977216d195abf25 197 Gene3D G3DSA:1.10.1740.10 8 119 1.4E-24 T 23-04-2016 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 SUPERFAMILY SSF46689 239 284 2.15E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 Gene3D G3DSA:1.10.10.60 239 285 2.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 Pfam PF12833 Helix-turn-helix domain 205 283 3.3E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 Gene3D G3DSA:2.60.120.280 37 166 6.5E-11 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 SUPERFAMILY SSF51215 37 166 2.88E-11 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 PANTHER PTHR11019 40 286 2.4E-35 T 23-04-2016 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 PANTHER PTHR11019:SF45 40 286 2.4E-35 T 23-04-2016 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 Pfam PF02311 AraC-like ligand binding domain 36 98 6.3E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS16045 56e59e570f102d58aa113e2fd7ed7024 286 SMART SM00342 201 282 4.5E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Pfam PF00593 TonB dependent receptor 576 818 2.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 PANTHER PTHR32552 111 820 6.9E-78 T 23-04-2016 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 153 820 1.8E-67 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 SUPERFAMILY SSF49464 29 119 1.96E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Gene3D G3DSA:2.60.40.1120 29 114 6.1E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Pfam PF13715 CarboxypepD_reg-like domain 30 116 6.3E-17 T 23-04-2016 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 232 8.7E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 PANTHER PTHR32552:SF10 111 820 6.9E-78 T 23-04-2016 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Gene3D G3DSA:2.40.170.20 254 820 4.4E-100 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 Gene3D G3DSA:2.170.130.10 115 250 1.3E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12605 45c9756b20ef2e7c8f8ca2477834c80a 820 SUPERFAMILY SSF56935 108 820 6.96E-97 T 23-04-2016 NIAKO_RS25670 bf72fc6af3c915bea0e1616dc1c58a7b 293 PANTHER PTHR23024 37 288 6.7E-45 T 23-04-2016 NIAKO_RS25670 bf72fc6af3c915bea0e1616dc1c58a7b 293 Pfam PF07859 alpha/beta hydrolase fold 65 268 2.2E-25 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS25670 bf72fc6af3c915bea0e1616dc1c58a7b 293 Gene3D G3DSA:3.40.50.1820 37 289 2.1E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25670 bf72fc6af3c915bea0e1616dc1c58a7b 293 SUPERFAMILY SSF53474 38 288 6.99E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 SUPERFAMILY SSF82861 106 190 3.01E-6 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 Pfam PF00924 Mechanosensitive ion channel 150 350 8.8E-40 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 PANTHER PTHR30566 25 353 2.1E-38 T 23-04-2016 NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 222 256 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 Gene3D G3DSA:2.30.30.60 208 256 1.6E-15 T 23-04-2016 NIAKO_RS28370 1f9dc3d28d8538f3083b5a946b4e2c6f 361 SUPERFAMILY SSF50182 193 258 1.73E-16 T 23-04-2016 IPR010920 LSM domain NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 SUPERFAMILY SSF55545 30 157 5.98E-20 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PANTHER PTHR22600 237 659 1.1E-228 T 23-04-2016 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PANTHER PTHR22600 1 218 1.1E-228 T 23-04-2016 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 31 154 6.0E-17 T 23-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 324 337 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 117 137 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 181 202 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 302 320 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 468 484 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 486 503 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PRINTS PR00738 Glycosyl hydrolase family 20 signature 152 169 3.7E-46 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Pfam PF13287 Fn3 associated 552 601 1.6E-10 T 23-04-2016 IPR026876 Fn3 associated repeat NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Gene3D G3DSA:3.20.20.80 156 557 7.3E-142 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Gene3D G3DSA:2.60.40.320 558 600 4.5E-4 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 SUPERFAMILY SSF51445 158 517 4.51E-126 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PANTHER PTHR22600:SF21 237 659 1.1E-228 T 23-04-2016 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 PANTHER PTHR22600:SF21 1 218 1.1E-228 T 23-04-2016 NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Gene3D G3DSA:3.30.379.10 12 155 3.2E-22 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Gene3D G3DSA:2.60.120.260 659 740 3.0E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35730 8600d24be147cc93f0b9da8bb8ddf302 765 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 158 504 1.4E-120 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 PIRSF PIRSF020736 1 202 2.2E-48 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 Gene3D G3DSA:1.20.1260.10 8 196 2.5E-61 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 PANTHER PTHR42637:SF1 10 191 1.9E-24 T 23-04-2016 NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 SUPERFAMILY SSF47240 10 197 1.2E-62 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 58 195 8.7E-31 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 13 55 1.7E-8 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 NIAKO_RS07545 3d59a39f6615e9c36670a042a426f27a 202 PANTHER PTHR42637 10 191 1.9E-24 T 23-04-2016 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 7 319 7.8E-133 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 9 320 46.569 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 201 210 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 173 186 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 138 154 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 157 170 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 92 103 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 117 135 2.0E-42 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PANTHER PTHR22855 5 322 7.5E-115 T 23-04-2016 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 Gene3D G3DSA:3.90.226.10 60 273 8.6E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 PANTHER PTHR22855:SF42 5 322 7.5E-115 T 23-04-2016 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 9 152 5.5E-61 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS24125 5257d7da707445bde2f4662fbc2c15ad 325 SUPERFAMILY SSF52096 10 320 3.13E-96 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 222 239 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 14 433 1.5E-192 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 SUPERFAMILY SSF51735 200 361 4.31E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 9 433 47.362 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 SUPERFAMILY SSF52283 362 441 3.17E-118 T 23-04-2016 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 SUPERFAMILY SSF52283 12 199 3.17E-118 T 23-04-2016 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 PANTHER PTHR23420 1 441 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 14 149 1.8E-69 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 150 440 3.0E-63 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Gene3D G3DSA:3.40.50.720 202 360 2.8E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 SMART SM00996 13 440 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Gene3D G3DSA:3.40.50.1480 14 201 3.4E-139 T 23-04-2016 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Gene3D G3DSA:3.40.50.1480 362 441 3.4E-139 T 23-04-2016 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 200 361 1.3E-77 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 SMART SM00997 200 361 5.1E-105 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05600 3fbc379ed612d4e567291c17b0419fe3 441 PIRSF PIRSF001109 1 441 8.5E-194 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 SMART SM00091 37 104 2.2E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 371 2.3E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 PANTHER PTHR24421:SF1 162 372 3.7E-36 T 23-04-2016 NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 PANTHER PTHR24421 162 372 3.7E-36 T 23-04-2016 NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 Pfam PF13426 PAS domain 48 150 1.2E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 Gene3D G3DSA:3.30.450.20 40 149 3.4E-20 T 23-04-2016 NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 Gene3D G3DSA:3.30.565.10 248 371 4.7E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 Pfam PF07730 Histidine kinase 180 238 3.0E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 152 2.8E-14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 SUPERFAMILY SSF55874 248 370 6.68E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05560 e9fb570009511d426052f7e5017a9a5a 372 SUPERFAMILY SSF55785 42 149 7.5E-19 T 23-04-2016 IPR000014 PAS domain NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 631 6.5E-170 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 1.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 1.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 1.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 1.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Gene3D G3DSA:1.10.290.10 269 392 1.1E-35 T 23-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 SMART SM00436 124 217 4.2E-40 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PANTHER PTHR11390:SF21 499 660 5.2E-179 T 23-04-2016 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PANTHER PTHR11390:SF21 1 482 5.2E-179 T 23-04-2016 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Pfam PF01751 Toprim domain 3 132 2.0E-13 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 SUPERFAMILY SSF56712 1 585 2.49E-172 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 SMART SM00437 258 536 2.7E-78 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Pfam PF01131 DNA topoisomerase 150 570 7.8E-118 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Gene3D G3DSA:3.40.50.140 1 151 1.8E-47 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Gene3D G3DSA:1.10.460.10 469 586 5.2E-57 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 Gene3D G3DSA:1.10.460.10 153 211 5.2E-57 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PANTHER PTHR11390 499 660 5.2E-179 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 PANTHER PTHR11390 1 482 5.2E-179 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NIAKO_RS18270 d43a7b888a9deb86174fcb5dabb96b40 709 SMART SM00493 1 124 6.8E-17 T 23-04-2016 IPR006171 Toprim domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 Gene3D G3DSA:3.30.565.10 291 431 2.6E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 SMART SM00304 52 104 2.4E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 SMART SM00091 111 177 1.9E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 430 3.8E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 Pfam PF13188 PAS domain 112 151 3.0E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 Gene3D G3DSA:3.30.450.20 107 169 6.3E-12 T 23-04-2016 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 112 162 2.4E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 SMART SM00387 331 431 1.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 SUPERFAMILY SSF55785 101 164 9.77E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 SUPERFAMILY SSF55874 285 431 6.16E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 4.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 4.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 4.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 Pfam PF00672 HAMP domain 34 100 2.6E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 PANTHER PTHR24423 6 15 3.2E-41 T 23-04-2016 NIAKO_RS19845 3312d4992254d689b7616793d0d37b28 431 PANTHER PTHR24423 99 431 3.2E-41 T 23-04-2016 NIAKO_RS12380 6a98d356e39401d8766b7dce144a721f 411 SUPERFAMILY SSF88946 8 79 5.1E-10 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12380 6a98d356e39401d8766b7dce144a721f 411 Pfam PF04542 Sigma-70 region 2 10 78 8.1E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12380 6a98d356e39401d8766b7dce144a721f 411 PANTHER PTHR30173 7 381 1.5E-87 T 23-04-2016 NIAKO_RS12380 6a98d356e39401d8766b7dce144a721f 411 PANTHER PTHR30173:SF15 7 381 1.5E-87 T 23-04-2016 NIAKO_RS12380 6a98d356e39401d8766b7dce144a721f 411 Gene3D G3DSA:1.10.1740.10 9 79 7.0E-8 T 23-04-2016 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Gene3D G3DSA:3.40.50.920 663 795 1.1E-28 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 PANTHER PTHR11624 172 341 9.9E-74 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 PANTHER PTHR11624 451 733 9.9E-74 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Gene3D G3DSA:3.40.50.970 8 379 5.7E-86 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 SUPERFAMILY SSF52922 661 795 9.82E-25 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Gene3D G3DSA:3.40.50.970 472 662 2.2E-43 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Pfam PF02780 Transketolase, C-terminal domain 666 768 7.3E-19 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 PANTHER PTHR11624:SF21 172 341 9.9E-74 T 23-04-2016 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 PANTHER PTHR11624:SF21 451 733 9.9E-74 T 23-04-2016 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Pfam PF00676 Dehydrogenase E1 component 48 358 3.6E-26 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 SMART SM00861 473 647 1.1E-25 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 Pfam PF02779 Transketolase, pyrimidine binding domain 477 641 3.4E-19 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 SUPERFAMILY SSF52518 21 376 4.1E-50 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS01435 e63390a95d2542c369966fdaebce995a 797 SUPERFAMILY SSF52518 461 652 1.77E-42 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 Gene3D G3DSA:1.10.1900.20 55 114 1.3E-26 T 23-04-2016 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-43 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 PANTHER PTHR10986 2 114 4.8E-50 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 114 23.715 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 Pfam PF00453 Ribosomal protein L20 3 109 9.5E-43 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-31 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-31 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-31 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 PANTHER PTHR10986:SF12 2 114 4.8E-50 T 23-04-2016 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 SUPERFAMILY SSF74731 3 113 1.99E-41 T 23-04-2016 NIAKO_RS10755 e792c4567084bd583c70977078d44e52 114 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 1.0E-12 T 23-04-2016 NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 Gene3D G3DSA:3.40.50.880 36 278 3.0E-15 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 Pfam PF06283 Trehalose utilisation 37 242 1.8E-30 T 23-04-2016 IPR029010 ThuA-like domain NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 SUPERFAMILY SSF52317 35 271 8.7E-23 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 Pfam PF03422 Carbohydrate binding module (family 6) 284 400 2.5E-31 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 Gene3D G3DSA:2.60.120.260 279 400 8.8E-40 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 SMART SM00606 276 402 2.2E-35 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 Gene3D G3DSA:2.80.10.50 418 537 4.1E-17 T 23-04-2016 NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 SUPERFAMILY SSF49785 277 401 4.25E-36 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 559 629 1.8E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37130 cb0ed24834c611c4a3f7776b5d3c223d 633 SUPERFAMILY SSF50405 418 537 5.56E-17 T 23-04-2016 IPR008999 Actin cross-linking NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 917 1001 4.5E-22 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SUPERFAMILY SSF49299 687 745 3.14E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SUPERFAMILY SSF49299 583 660 6.41E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SUPERFAMILY SSF49299 750 836 6.28E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Pfam PF00801 PKD domain 763 821 8.0E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Pfam PF00801 PKD domain 698 735 3.3E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Pfam PF13585 C-terminal domain of CHU protein family 917 1000 9.3E-29 T 23-04-2016 NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SMART SM00089 752 836 1.4E-12 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SMART SM00089 680 749 3.3E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 SMART SM00089 584 663 1.7E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Gene3D G3DSA:2.60.40.670 582 664 6.1E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Gene3D G3DSA:2.60.40.670 750 837 7.6E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07350 51436f77583e25dafcdcc3901a6f56d6 1002 Gene3D G3DSA:2.60.40.670 674 745 2.3E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 PANTHER PTHR17630:SF49 1 309 7.5E-72 T 23-04-2016 NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 Gene3D G3DSA:3.40.50.1820 9 308 1.1E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 Pfam PF12697 Alpha/beta hydrolase family 43 290 1.0E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 SUPERFAMILY SSF53474 202 300 2.03E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 SUPERFAMILY SSF53474 8 145 2.03E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15515 e1e66d676a61e932e1e1b6f692f328ea 309 PANTHER PTHR17630 1 309 7.5E-72 T 23-04-2016 NIAKO_RS10380 90ce3125712608dd67aee87938db9167 189 Pfam PF04138 GtrA-like protein 26 153 7.6E-16 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 Pfam PF07980 SusD family 319 568 3.0E-26 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 SUPERFAMILY SSF48452 19 568 2.35E-93 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 Pfam PF14322 Starch-binding associating with outer membrane 24 204 9.7E-26 T 23-04-2016 NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 Gene3D G3DSA:1.25.40.10 206 295 1.6E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 Gene3D G3DSA:1.25.40.10 335 349 1.6E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12245 450d4f7d77a4fffe91483dfcf1d69ea2 569 Gene3D G3DSA:1.25.40.10 403 510 1.6E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Gene3D G3DSA:2.170.130.10 114 219 9.5E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Gene3D G3DSA:2.60.40.1120 25 113 1.1E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Pfam PF14905 Outer membrane protein beta-barrel family 589 931 9.5E-24 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 PANTHER PTHR30069:SF11 6 265 2.3E-33 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 PANTHER PTHR30069 6 265 2.3E-33 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 SUPERFAMILY SSF49464 23 103 3.14E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Pfam PF13715 CarboxypepD_reg-like domain 26 112 6.6E-16 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Gene3D G3DSA:2.40.170.20 379 932 1.1E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Gene3D G3DSA:2.40.170.20 230 241 1.1E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Gene3D G3DSA:2.40.170.20 319 342 1.1E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 SUPERFAMILY SSF56935 320 932 1.17E-61 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 SUPERFAMILY SSF56935 109 255 1.17E-61 T 23-04-2016 NIAKO_RS33925 c8f4108f029fc69e47b2d3bf8246f03f 934 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 218 1.0E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 PANTHER PTHR31084:SF0 310 943 5.3E-259 T 23-04-2016 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 PANTHER PTHR31084:SF0 25 140 5.3E-259 T 23-04-2016 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 SUPERFAMILY SSF48208 440 922 4.56E-90 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Gene3D G3DSA:2.60.120.260 143 244 5.0E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 291 437 1.1E-32 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 31 116 1.5E-30 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 156 244 6.3E-7 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 SUPERFAMILY SSF49785 137 248 9.57E-19 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 PANTHER PTHR31084 310 943 5.3E-259 T 23-04-2016 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 PANTHER PTHR31084 25 140 5.3E-259 T 23-04-2016 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Gene3D G3DSA:2.70.98.50 294 571 5.6E-126 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS17800 e8bf42f42b4e3777adbd79b6021e0262 943 Gene3D G3DSA:2.70.98.50 30 116 5.6E-126 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 Pfam PF03150 Di-haem cytochrome c peroxidase 48 193 3.0E-41 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 PANTHER PTHR30600 39 328 1.2E-61 T 23-04-2016 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 SUPERFAMILY SSF46626 182 320 2.19E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 PIRSF PIRSF000294 25 335 4.9E-63 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 Gene3D G3DSA:1.10.760.10 184 324 1.1E-36 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 SUPERFAMILY SSF46626 24 180 1.04E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 PANTHER PTHR30600:SF7 39 328 1.2E-61 T 23-04-2016 NIAKO_RS14520 b0c485dca69de7a9d969d6af8a0743d4 344 Gene3D G3DSA:1.10.760.10 39 183 4.0E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS32160 b9a1697c91bb2f4aa999603bc7bec394 74 Pfam PF11146 Protein of unknown function (DUF2905) 6 70 3.0E-24 T 23-04-2016 IPR021320 Protein of unknown function DUF2905 NIAKO_RS32160 b9a1697c91bb2f4aa999603bc7bec394 74 PANTHER PTHR36443:SF1 1 74 3.2E-17 T 23-04-2016 NIAKO_RS32160 b9a1697c91bb2f4aa999603bc7bec394 74 PANTHER PTHR36443 1 74 3.2E-17 T 23-04-2016 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 Gene3D G3DSA:3.30.280.10 1 100 1.2E-49 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 PANTHER PTHR33569 2 100 2.4E-47 T 23-04-2016 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 PANTHER PTHR33569:SF1 2 100 2.4E-47 T 23-04-2016 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 PIRSF PIRSF001223 1 100 5.1E-50 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 SUPERFAMILY SSF54111 1 100 9.55E-47 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 7.6E-54 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 Pfam PF00547 Urease, gamma subunit 1 99 1.0E-47 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-37 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02210 30490aaaec7090064dee271da5b03d06 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.827 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS04675 37b8d4479811b6dbcbdacd0c3cf12aa0 144 PANTHER PTHR23091 1 130 5.4E-16 T 23-04-2016 NIAKO_RS04675 37b8d4479811b6dbcbdacd0c3cf12aa0 144 Pfam PF00583 Acetyltransferase (GNAT) family 51 123 1.7E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS04675 37b8d4479811b6dbcbdacd0c3cf12aa0 144 SUPERFAMILY SSF55729 1 130 3.71E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS04675 37b8d4479811b6dbcbdacd0c3cf12aa0 144 Gene3D G3DSA:3.40.630.30 1 130 1.9E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS36975 9cd5f2a7385a2c03b3975cac8eda1521 368 Gene3D G3DSA:3.40.50.1820 111 364 1.8E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36975 9cd5f2a7385a2c03b3975cac8eda1521 368 PANTHER PTHR10655:SF24 147 364 1.0E-44 T 23-04-2016 NIAKO_RS36975 9cd5f2a7385a2c03b3975cac8eda1521 368 Pfam PF01738 Dienelactone hydrolase family 239 345 1.6E-4 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NIAKO_RS36975 9cd5f2a7385a2c03b3975cac8eda1521 368 SUPERFAMILY SSF53474 151 362 8.81E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36975 9cd5f2a7385a2c03b3975cac8eda1521 368 PANTHER PTHR10655 147 364 1.0E-44 T 23-04-2016 NIAKO_RS29275 0e292b90f8e490a889711782be24b82f 123 PANTHER PTHR31157 1 121 3.6E-24 T 23-04-2016 NIAKO_RS29275 0e292b90f8e490a889711782be24b82f 123 Gene3D G3DSA:3.40.33.10 3 87 5.8E-11 T 23-04-2016 IPR014044 CAP domain NIAKO_RS29275 0e292b90f8e490a889711782be24b82f 123 SUPERFAMILY SSF55797 2 120 1.73E-18 T 23-04-2016 IPR014044 CAP domain NIAKO_RS29275 0e292b90f8e490a889711782be24b82f 123 Pfam PF00188 Cysteine-rich secretory protein family 6 120 3.5E-15 T 23-04-2016 IPR014044 CAP domain NIAKO_RS25805 6c4174c71574aa3cf458f7ef9c5cb1cf 345 Pfam PF01344 Kelch motif 147 193 2.4E-8 T 23-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 NIAKO_RS25805 6c4174c71574aa3cf458f7ef9c5cb1cf 345 PANTHER PTHR24412 73 339 3.0E-21 T 23-04-2016 NIAKO_RS25805 6c4174c71574aa3cf458f7ef9c5cb1cf 345 Gene3D G3DSA:2.120.10.80 57 341 1.1E-47 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS25805 6c4174c71574aa3cf458f7ef9c5cb1cf 345 SUPERFAMILY SSF117281 34 240 1.7E-37 T 23-04-2016 NIAKO_RS11400 7a1ccbe26240f85e67f2cbde07d42443 337 PANTHER PTHR12083:SF8 8 303 1.2E-72 T 23-04-2016 NIAKO_RS11400 7a1ccbe26240f85e67f2cbde07d42443 337 Gene3D G3DSA:3.90.1200.10 125 317 4.7E-5 T 23-04-2016 NIAKO_RS11400 7a1ccbe26240f85e67f2cbde07d42443 337 SUPERFAMILY SSF56112 3 313 3.06E-13 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS11400 7a1ccbe26240f85e67f2cbde07d42443 337 PANTHER PTHR12083 8 303 1.2E-72 T 23-04-2016 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 Pfam PF08281 Sigma-70, region 4 122 174 5.2E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 Gene3D G3DSA:1.10.1740.10 5 97 6.4E-16 T 23-04-2016 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 PANTHER PTHR30173:SF20 1 186 1.8E-46 T 23-04-2016 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 178 1.3E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 PANTHER PTHR30173 1 186 1.8E-46 T 23-04-2016 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 Gene3D G3DSA:1.10.10.10 118 181 2.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 SUPERFAMILY SSF88659 118 180 3.92E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 177 8.8E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 Pfam PF04542 Sigma-70 region 2 27 88 6.2E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12910 f77e4e7e2c3ffd223ab400efaa571d2d 186 SUPERFAMILY SSF88946 7 103 4.19E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 SUPERFAMILY SSF52016 3 183 7.65E-51 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 Gene3D G3DSA:3.20.19.10 4 180 2.9E-39 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 Pfam PF00694 Aconitase C-terminal domain 5 124 5.3E-31 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 181 1.9E-56 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 PANTHER PTHR11670:SF27 5 195 1.8E-72 T 23-04-2016 NIAKO_RS13200 5a1b597a86f31b55f307f6058f5fd5eb 198 PANTHER PTHR11670 5 195 1.8E-72 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PANTHER PTHR30620:SF5 74 744 0.0 T 23-04-2016 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PANTHER PTHR30620:SF5 1 55 0.0 T 23-04-2016 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PRINTS PR00133 Glycosyl hydrolase family 3 signature 201 217 1.4E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PRINTS PR00133 Glycosyl hydrolase family 3 signature 118 137 1.4E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PRINTS PR00133 Glycosyl hydrolase family 3 signature 164 180 1.4E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PRINTS PR00133 Glycosyl hydrolase family 3 signature 271 289 1.4E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 115 1.4E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 SUPERFAMILY SSF52279 390 629 2.75E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 SMART SM01217 663 732 5.0E-32 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 Pfam PF14310 Fibronectin type III-like domain 663 731 1.8E-22 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 Gene3D G3DSA:3.20.20.300 24 363 1.2E-109 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PANTHER PTHR30620 74 744 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 PANTHER PTHR30620 1 55 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 40 349 1.5E-72 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 Gene3D G3DSA:3.40.50.1700 376 629 1.3E-81 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 390 626 5.7E-60 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 SUPERFAMILY SSF51445 25 389 1.16E-106 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS13990 48eb7dfc6abc4a1da54f027d7390e186 744 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 271 288 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.170.130.10 203 332 8.5E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 110 1095 2.0E-204 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Pfam PF07715 TonB-dependent Receptor Plug Domain 201 330 6.6E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Pfam PF13715 CarboxypepD_reg-like domain 111 182 1.3E-14 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.60.40.1120 111 181 9.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF49464 109 190 1.31E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF56935 408 500 4.4E-74 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF56935 931 974 4.4E-74 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF56935 188 354 4.4E-74 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF56935 532 876 4.4E-74 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 SUPERFAMILY SSF56935 1016 1091 4.4E-74 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 306 336 1.3E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532:SF57 297 492 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532:SF57 100 274 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532:SF57 570 632 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532:SF57 662 1096 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.40.170.20 333 355 4.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.40.170.20 417 874 4.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.40.170.20 919 986 4.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 Gene3D G3DSA:2.40.170.20 1026 1081 4.9E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532 297 492 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532 100 274 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532 570 632 1.2E-170 T 23-04-2016 NIAKO_RS23390 78b840d487b2cc7403f3038a957dcd60 1098 PANTHER PTHR11532 662 1096 1.2E-170 T 23-04-2016 NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 PANTHER PTHR24567 9 188 1.8E-23 T 23-04-2016 NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 SMART SM00100 10 132 2.2E-4 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 PANTHER PTHR24567:SF33 9 188 1.8E-23 T 23-04-2016 NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 Gene3D G3DSA:2.60.120.10 1 153 7.0E-30 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 Pfam PF00027 Cyclic nucleotide-binding domain 29 110 3.6E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS12405 11165341365602b1f5d172f4ece059eb 190 SUPERFAMILY SSF51206 14 143 2.88E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS09295 c0650f68b88aafd91da75ba29b7faccc 280 SUPERFAMILY SSF52402 1 149 1.09E-11 T 23-04-2016 NIAKO_RS09295 c0650f68b88aafd91da75ba29b7faccc 280 Gene3D G3DSA:3.40.50.620 147 278 3.0E-6 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS09295 c0650f68b88aafd91da75ba29b7faccc 280 SUPERFAMILY SSF52402 154 278 4.77E-6 T 23-04-2016 NIAKO_RS09295 c0650f68b88aafd91da75ba29b7faccc 280 Pfam PF00582 Universal stress protein family 1 149 9.9E-5 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS09295 c0650f68b88aafd91da75ba29b7faccc 280 Gene3D G3DSA:3.40.50.620 1 146 1.6E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 SUPERFAMILY SSF52242 420 570 5.63E-43 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 615 885 7.6E-118 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 SMART SM01018 325 408 5.3E-45 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Gene3D G3DSA:3.10.196.10 635 902 2.1E-106 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Gene3D G3DSA:1.10.1240.10 318 405 1.0E-38 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Pfam PF02310 B12 binding domain 425 519 2.1E-19 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 SUPERFAMILY SSF47644 320 407 1.96E-29 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 SUPERFAMILY SSF51717 27 301 7.46E-90 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Pfam PF00809 Pterin binding enzyme 31 269 1.0E-57 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Gene3D G3DSA:3.40.50.280 423 570 9.0E-60 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Pfam PF02607 B12 binding domain 327 400 1.1E-25 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 TIGRFAM TIGR02082 metH: methionine synthase 7 868 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 Gene3D G3DSA:3.20.20.20 27 307 1.1E-112 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 SUPERFAMILY SSF56507 579 902 9.16E-120 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NIAKO_RS29640 e0434f7d3e291304571c0c48f7e2fc3a 903 PIRSF PIRSF000381 2 872 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NIAKO_RS31850 dd86019b10be4fd8ccd251cba648be71 408 PANTHER PTHR34856:SF4 2 407 1.0E-57 T 23-04-2016 NIAKO_RS31850 dd86019b10be4fd8ccd251cba648be71 408 PANTHER PTHR34856 2 407 1.0E-57 T 23-04-2016 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 178 1.3E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 SUPERFAMILY SSF88659 116 185 6.17E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 Pfam PF04542 Sigma-70 region 2 24 90 2.7E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 PANTHER PTHR30173 8 194 6.3E-42 T 23-04-2016 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 Pfam PF08281 Sigma-70, region 4 123 174 5.3E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 Gene3D G3DSA:1.10.10.10 120 181 2.1E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 19 178 9.9E-40 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 PANTHER PTHR30173:SF20 8 194 6.3E-42 T 23-04-2016 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 Gene3D G3DSA:1.10.1740.10 8 101 6.1E-25 T 23-04-2016 NIAKO_RS13315 bf2b8ec78a1fb3e5f8cd27c7e8023bc4 194 SUPERFAMILY SSF88946 7 92 9.73E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 SUPERFAMILY SSF46894 129 228 1.53E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 PANTHER PTHR26402 3 228 5.2E-65 T 23-04-2016 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 Pfam PF00072 Response regulator receiver domain 5 116 8.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 Gene3D G3DSA:3.40.50.2300 3 126 2.9E-36 T 23-04-2016 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 SMART SM00862 154 227 1.9E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 SMART SM00448 3 116 8.5E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 PANTHER PTHR26402:SF292 3 228 5.2E-65 T 23-04-2016 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 Gene3D G3DSA:1.10.10.10 129 229 4.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 5.2E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS08580 f00b6f8284b8a1eeeb52f0ae28ad2524 231 SUPERFAMILY SSF52172 2 130 2.99E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 SUPERFAMILY SSF53187 25 73 1.48E-54 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 SUPERFAMILY SSF53187 186 405 1.48E-54 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 Gene3D G3DSA:3.40.630.10 17 79 1.6E-54 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 Gene3D G3DSA:3.40.630.10 187 404 1.6E-54 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 PANTHER PTHR12147:SF16 12 404 7.3E-41 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 PANTHER PTHR12147 12 404 7.3E-41 T 23-04-2016 NIAKO_RS28050 fe577bc5bfe8ada70b5346d34712da3e 427 Pfam PF04389 Peptidase family M28 202 403 1.5E-40 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS02150 602689cb0b1946074b61fe3ec80ffcb5 170 Pfam PF09349 OHCU decarboxylase 9 163 1.7E-34 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 NIAKO_RS02150 602689cb0b1946074b61fe3ec80ffcb5 170 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 165 8.7E-49 T 23-04-2016 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 NIAKO_RS02150 602689cb0b1946074b61fe3ec80ffcb5 170 SUPERFAMILY SSF158694 2 166 3.66E-40 T 23-04-2016 NIAKO_RS02150 602689cb0b1946074b61fe3ec80ffcb5 170 Gene3D G3DSA:1.10.3330.10 15 166 6.4E-41 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 NIAKO_RS14735 90345f946620d02152ef04cdd6785d27 179 Pfam PF01569 PAP2 superfamily 54 165 2.0E-25 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14735 90345f946620d02152ef04cdd6785d27 179 Gene3D G3DSA:1.20.144.10 21 173 7.8E-41 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14735 90345f946620d02152ef04cdd6785d27 179 PANTHER PTHR14969 31 168 2.1E-28 T 23-04-2016 NIAKO_RS14735 90345f946620d02152ef04cdd6785d27 179 SMART SM00014 51 162 2.8E-24 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14735 90345f946620d02152ef04cdd6785d27 179 SUPERFAMILY SSF48317 11 176 4.45E-40 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS02955 b3a21e57952dc0c7296d66879a8c4657 301 PANTHER PTHR23024 55 300 2.8E-82 T 23-04-2016 NIAKO_RS02955 b3a21e57952dc0c7296d66879a8c4657 301 PANTHER PTHR23024:SF24 55 300 2.8E-82 T 23-04-2016 NIAKO_RS02955 b3a21e57952dc0c7296d66879a8c4657 301 Gene3D G3DSA:3.40.50.1820 28 300 6.8E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS02955 b3a21e57952dc0c7296d66879a8c4657 301 SUPERFAMILY SSF53474 23 299 6.12E-65 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS02955 b3a21e57952dc0c7296d66879a8c4657 301 Pfam PF07859 alpha/beta hydrolase fold 77 278 6.1E-66 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS07465 bee26076df20224c777e9aa751b81bfe 140 SUPERFAMILY SSF82093 64 129 1.06E-6 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 NIAKO_RS07465 bee26076df20224c777e9aa751b81bfe 140 Pfam PF03100 CcmE 4 126 4.8E-10 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PANTHER PTHR11019:SF11 25 104 1.9E-30 T 23-04-2016 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PANTHER PTHR11019:SF11 121 293 1.9E-30 T 23-04-2016 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 Pfam PF12833 Helix-turn-helix domain 208 286 3.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PANTHER PTHR11019 25 104 1.9E-30 T 23-04-2016 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PANTHER PTHR11019 121 293 1.9E-30 T 23-04-2016 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 SUPERFAMILY SSF46689 190 235 2.33E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 Gene3D G3DSA:1.10.10.60 187 239 6.9E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 SUPERFAMILY SSF51215 31 89 2.75E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 SUPERFAMILY SSF46689 239 289 1.88E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 1.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 1.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 Gene3D G3DSA:2.60.120.280 24 91 2.8E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 Gene3D G3DSA:1.10.10.60 240 289 7.8E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11790 4b1ec9e87f0bc2ec9e72763889f9ee6a 294 SMART SM00342 202 285 3.3E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 Gene3D G3DSA:3.40.50.980 126 301 1.0E-22 T 23-04-2016 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 Pfam PF00501 AMP-binding enzyme 127 369 4.3E-39 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 Gene3D G3DSA:2.30.38.10 312 363 2.0E-9 T 23-04-2016 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 PANTHER PTHR24095 129 452 3.6E-35 T 23-04-2016 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 Gene3D G3DSA:3.30.300.30 364 449 6.0E-8 T 23-04-2016 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 SUPERFAMILY SSF56801 63 451 4.58E-59 T 23-04-2016 NIAKO_RS13625 43f79b6ff6647597d60699f8ed5620d9 456 PANTHER PTHR24095:SF181 129 452 3.6E-35 T 23-04-2016 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 SUPERFAMILY SSF49313 42 122 2.04E-7 T 23-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Pfam PF16499 Alpha galactosidase A 253 503 7.8E-37 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Pfam PF16499 Alpha galactosidase A 127 212 8.3E-12 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 SUPERFAMILY SSF51011 425 510 1.17E-16 T 23-04-2016 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PRINTS PR00740 Glycosyl hydrolase family 27 signature 122 141 4.7E-21 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PRINTS PR00740 Glycosyl hydrolase family 27 signature 379 400 4.7E-21 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PRINTS PR00740 Glycosyl hydrolase family 27 signature 158 173 4.7E-21 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PRINTS PR00740 Glycosyl hydrolase family 27 signature 198 219 4.7E-21 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PRINTS PR00740 Glycosyl hydrolase family 27 signature 284 302 4.7E-21 T 23-04-2016 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Pfam PF05345 Putative Ig domain 71 107 1.5E-5 T 23-04-2016 IPR008009 Putative Ig NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PANTHER PTHR11452 253 508 5.9E-114 T 23-04-2016 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 PANTHER PTHR11452 125 224 5.9E-114 T 23-04-2016 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Gene3D G3DSA:2.60.40.1180 418 513 2.4E-28 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Gene3D G3DSA:2.60.40.10 51 120 4.5E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Gene3D G3DSA:3.20.20.70 121 417 3.0E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 SUPERFAMILY SSF51445 120 217 1.74E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 SUPERFAMILY SSF51445 244 424 1.74E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03310 67984494d35072d5dd5cc9fc65265105 514 Pfam PF10632 He_PIG associated, NEW1 domain of bacterial glycohydrolase 41 69 1.6E-14 T 23-04-2016 IPR019599 Alpha-galactosidase, NEW1 domain NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Gene3D G3DSA:3.40.1190.20 233 500 1.5E-80 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 SUPERFAMILY SSF64153 2 247 5.36E-51 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 SUPERFAMILY SSF53613 222 499 3.76E-71 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 210 21.021 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Pfam PF03853 YjeF-related protein N-terminus 26 188 4.1E-40 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 PIRSF PIRSF017184 1 501 1.2E-134 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 499 21.623 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 PANTHER PTHR12592:SF0 1 501 8.2E-124 T 23-04-2016 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Pfam PF01256 Carbohydrate kinase 249 489 4.0E-58 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 Gene3D G3DSA:3.40.50.10260 1 232 1.4E-54 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 PANTHER PTHR12592 1 501 8.2E-124 T 23-04-2016 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 228 497 3.8E-67 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site NIAKO_RS08900 4494ba5110da7ceb570f79029e9a8f2d 501 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 209 8.2E-36 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NIAKO_RS32030 6c6c3472abd35a7b5b608958cb4091f2 123 PIRSF PIRSF028777 1 123 4.9E-42 T 23-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 NIAKO_RS32030 6c6c3472abd35a7b5b608958cb4091f2 123 PANTHER PTHR31503:SF17 1 122 3.5E-32 T 23-04-2016 NIAKO_RS32030 6c6c3472abd35a7b5b608958cb4091f2 123 Pfam PF03733 Inner membrane component domain 4 54 3.7E-19 T 23-04-2016 IPR005185 Inner membrane component domain NIAKO_RS32030 6c6c3472abd35a7b5b608958cb4091f2 123 Pfam PF03733 Inner membrane component domain 69 117 2.5E-17 T 23-04-2016 IPR005185 Inner membrane component domain NIAKO_RS32030 6c6c3472abd35a7b5b608958cb4091f2 123 PANTHER PTHR31503 1 122 3.5E-32 T 23-04-2016 NIAKO_RS32165 6f7885cb336cb3e2216c83d369b57093 368 PANTHER PTHR31061 4 368 3.7E-63 T 23-04-2016 NIAKO_RS09835 77b66893c6a77b2a2600fa22785d867e 514 Gene3D G3DSA:2.40.160.60 208 513 4.2E-40 T 23-04-2016 NIAKO_RS09835 77b66893c6a77b2a2600fa22785d867e 514 Gene3D G3DSA:2.40.160.60 30 142 4.2E-40 T 23-04-2016 NIAKO_RS09835 77b66893c6a77b2a2600fa22785d867e 514 SUPERFAMILY SSF56935 208 512 4.76E-12 T 23-04-2016 NIAKO_RS09835 77b66893c6a77b2a2600fa22785d867e 514 SUPERFAMILY SSF56935 31 142 4.76E-12 T 23-04-2016 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 Gene3D G3DSA:3.40.50.720 37 181 1.6E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 39 52 1.1E-15 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 93 109 1.1E-15 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 335 351 1.1E-15 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 245 261 1.1E-15 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 155 169 1.1E-15 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PANTHER PTHR22604 1 369 1.3E-92 T 23-04-2016 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 PANTHER PTHR22604:SF125 1 369 1.3E-92 T 23-04-2016 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 SUPERFAMILY SSF51735 34 192 3.35E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 SUPERFAMILY SSF55347 171 334 3.92E-18 T 23-04-2016 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 Gene3D G3DSA:3.30.360.10 182 369 3.5E-30 T 23-04-2016 NIAKO_RS35565 d389b0ff0e4d7293eef6c13dfa66aec5 370 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 42 165 4.5E-31 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 SUPERFAMILY SSF46689 216 267 1.61E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 SUPERFAMILY SSF46689 270 319 9.41E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 SMART SM00342 233 316 1.3E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 Pfam PF12833 Helix-turn-helix domain 240 317 3.7E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 Gene3D G3DSA:1.10.10.60 222 269 5.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 PANTHER PTHR11019 57 319 8.2E-51 T 23-04-2016 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 Gene3D G3DSA:1.10.10.60 270 319 1.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 Gene3D G3DSA:3.40.50.880 3 221 4.0E-35 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 Pfam PF01965 DJ-1/PfpI family 90 178 4.9E-8 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 PANTHER PTHR11019:SF68 57 319 8.2E-51 T 23-04-2016 NIAKO_RS29395 97f809280cb3713ffebb2037c8ad6d6a 323 SUPERFAMILY SSF52317 1 197 1.24E-30 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 SMART SM00422 4 73 4.3E-27 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 SUPERFAMILY SSF46955 4 111 6.59E-27 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 Gene3D G3DSA:1.10.490.50 161 253 2.4E-12 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 Gene3D G3DSA:1.10.1660.10 4 114 3.3E-27 T 23-04-2016 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 PANTHER PTHR30204:SF27 1 251 1.5E-40 T 23-04-2016 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 Pfam PF07739 TipAS antibiotic-recognition domain 132 249 7.0E-20 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.7E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 3.7E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.7E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 PANTHER PTHR30204 1 251 1.5E-40 T 23-04-2016 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 Pfam PF13411 MerR HTH family regulatory protein 4 71 1.5E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS07090 b7c515898c898af36803bdc609ec38e2 255 SUPERFAMILY SSF89082 160 252 1.03E-10 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 PANTHER PTHR35803 1 643 6.1E-172 T 23-04-2016 NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 Pfam PF10566 Glycoside hydrolase 97 288 544 8.7E-65 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 SUPERFAMILY SSF51445 288 496 9.13E-23 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 Gene3D G3DSA:3.20.20.70 298 437 2.2E-8 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 PANTHER PTHR35803:SF2 1 643 6.1E-172 T 23-04-2016 NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 546 639 8.9E-26 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS11965 fcb1ba912d6d119cce68cae217c8a678 643 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 25 283 1.4E-49 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS05425 0b92bdcc8a0e7975f2f24c0a6d35e384 303 SUPERFAMILY SSF63825 90 236 1.57E-6 T 23-04-2016 NIAKO_RS12475 2e6299920f3c79982e86a97c4b049dfd 119 SUPERFAMILY SSF46785 15 116 6.99E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12475 2e6299920f3c79982e86a97c4b049dfd 119 Gene3D G3DSA:1.10.10.10 15 117 1.2E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12475 2e6299920f3c79982e86a97c4b049dfd 119 Pfam PF01638 HxlR-like helix-turn-helix 26 114 8.4E-31 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS12475 2e6299920f3c79982e86a97c4b049dfd 119 PANTHER PTHR33204 5 116 5.5E-32 T 23-04-2016 NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 245 370 1.1E-27 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 PANTHER PTHR23073 239 441 4.5E-41 T 23-04-2016 NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 SUPERFAMILY SSF52540 200 437 3.45E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 SMART SM00382 241 375 1.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 PANTHER PTHR23073:SF24 239 441 4.5E-41 T 23-04-2016 NIAKO_RS02345 6b04ed71e07e575efe1196adaa7f905c 450 Gene3D G3DSA:3.40.50.300 203 404 3.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 SUPERFAMILY SSF54862 334 402 4.71E-14 T 23-04-2016 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 PANTHER PTHR11938 10 328 2.1E-89 T 23-04-2016 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 PANTHER PTHR11938:SF87 10 328 2.1E-89 T 23-04-2016 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 Pfam PF14697 4Fe-4S dicluster domain 336 397 3.0E-22 T 23-04-2016 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 Gene3D G3DSA:3.20.20.70 7 308 3.4E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 Pfam PF01180 Dihydroorotate dehydrogenase 5 303 1.8E-31 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 7 318 7.5E-58 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 Gene3D G3DSA:3.30.70.20 322 407 3.4E-17 T 23-04-2016 NIAKO_RS02265 796e871fb1f83cfe9378005f3643dc00 422 SUPERFAMILY SSF51395 2 319 1.23E-65 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 364 5.3E-80 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 SUPERFAMILY SSF55979 246 369 2.22E-30 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 362 2.5E-23 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Gene3D G3DSA:3.10.150.10 1 117 1.2E-23 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Gene3D G3DSA:3.10.150.10 123 247 2.5E-29 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 PANTHER PTHR30478 2 371 5.3E-106 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 242 2.2E-21 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 PIRSF PIRSF000804 1 370 7.0E-102 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 SMART SM00480 17 362 1.1E-78 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 SUPERFAMILY SSF55979 1 116 6.28E-23 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Gene3D G3DSA:3.10.150.10 248 368 1.8E-31 T 23-04-2016 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 1.9E-20 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31305 2ee0d84f73e86b22028d8cf4bf01ac0f 371 SUPERFAMILY SSF55979 125 243 5.5E-23 T 23-04-2016 NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 Pfam PF00248 Aldo/keto reductase family 15 315 1.3E-73 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 SUPERFAMILY SSF51430 1 318 3.01E-96 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.5E-8 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 PRINTS PR00069 Aldo-keto reductase signature 47 71 1.5E-8 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.5E-8 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 PANTHER PTHR11732 1 315 4.5E-118 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS05420 b2b691d2e2eff6a25a98f43d13fae08f 345 Gene3D G3DSA:3.20.20.100 1 317 1.4E-96 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 Gene3D G3DSA:1.10.10.60 243 288 1.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 Gene3D G3DSA:1.10.10.60 184 236 2.1E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 PANTHER PTHR11019 34 288 7.1E-41 T 23-04-2016 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 PANTHER PTHR11019:SF80 34 288 7.1E-41 T 23-04-2016 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 SMART SM00342 203 286 7.2E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 SUPERFAMILY SSF46689 242 289 1.88E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20825 917d86d881e38c02bb271a4facd5e8d6 290 Pfam PF12833 Helix-turn-helix domain 209 287 1.1E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Gene3D G3DSA:1.10.10.60 572 633 5.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 SUPERFAMILY SSF52540 325 564 6.05E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 PANTHER PTHR32071 1 149 5.9E-157 T 23-04-2016 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 PANTHER PTHR32071 296 632 5.9E-157 T 23-04-2016 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 SUPERFAMILY SSF46689 539 632 5.73E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 SMART SM00448 3 114 9.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Gene3D G3DSA:3.40.50.2300 4 117 1.5E-23 T 23-04-2016 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 350 363 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 412 427 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 SMART SM00382 346 490 1.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 SUPERFAMILY SSF52172 4 134 2.13E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 539 548 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Pfam PF00158 Sigma-54 interaction domain 326 492 6.7E-72 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Gene3D G3DSA:3.40.50.300 322 498 6.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Pfam PF02954 Bacterial regulatory protein, Fis family 591 630 4.1E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS15530 1ce17f5c14001b935bbc13e006703482 638 Gene3D G3DSA:1.10.8.60 499 571 6.2E-22 T 23-04-2016 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 PANTHER PTHR22901:SF1 372 642 2.1E-162 T 23-04-2016 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 PANTHER PTHR22901:SF1 1 221 2.1E-162 T 23-04-2016 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 101 531 2.1E-96 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 PANTHER PTHR22901 372 642 2.1E-162 T 23-04-2016 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 PANTHER PTHR22901 1 221 2.1E-162 T 23-04-2016 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 SUPERFAMILY SSF49785 242 370 4.78E-25 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 Gene3D G3DSA:2.60.120.260 239 360 4.0E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 237 370 2.0E-8 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 SUPERFAMILY SSF52266 408 593 6.59E-79 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03675 bd2cb48294fc1ffab91f840c3fdf8646 642 SUPERFAMILY SSF52266 100 205 6.59E-79 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SUPERFAMILY SSF55874 310 458 3.41E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 300 4.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SMART SM00387 350 459 1.0E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SUPERFAMILY SSF47384 219 300 2.55E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SMART SM00304 182 235 2.0E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SUPERFAMILY SSF158472 184 233 1.44E-7 T 23-04-2016 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 456 6.9E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 PANTHER PTHR24423 176 456 1.2E-46 T 23-04-2016 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 3.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 3.6E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 SMART SM00388 236 302 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 Gene3D G3DSA:3.30.565.10 305 457 3.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 Pfam PF00672 HAMP domain 163 232 1.3E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS28660 c4da063f39bb316ef6f65d41470bf76c 465 Gene3D G3DSA:1.10.287.130 228 298 9.5E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 PANTHER PTHR26402:SF151 6 216 2.0E-38 T 23-04-2016 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 SUPERFAMILY SSF52172 6 135 1.42E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 PANTHER PTHR26402 6 216 2.0E-38 T 23-04-2016 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 SUPERFAMILY SSF46894 149 216 5.44E-8 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 Gene3D G3DSA:3.40.50.2300 6 146 5.8E-32 T 23-04-2016 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 Pfam PF00072 Response regulator receiver domain 9 120 2.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 Gene3D G3DSA:1.10.10.10 152 216 4.2E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04205 d8fbc4ae5e06fa2c9195a8e07f62f7fd 217 SMART SM00448 6 119 7.1E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS22815 64cdf9e4f7c164e8329baa03adf55768 645 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 568 645 2.0E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS22815 64cdf9e4f7c164e8329baa03adf55768 645 Gene3D G3DSA:2.60.40.10 472 536 4.9E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS05390 08403715bb7856af24647bf19146aefa 159 Pfam PF13673 Acetyltransferase (GNAT) domain 31 135 2.7E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS05390 08403715bb7856af24647bf19146aefa 159 SUPERFAMILY SSF55729 1 134 1.4E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS05390 08403715bb7856af24647bf19146aefa 159 Gene3D G3DSA:3.40.630.30 2 136 8.5E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24025 a04e816b9dafa24bf905c55592928809 260 Gene3D G3DSA:2.60.120.200 29 259 2.9E-72 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS24025 a04e816b9dafa24bf905c55592928809 260 SUPERFAMILY SSF49899 29 259 4.39E-68 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS24025 a04e816b9dafa24bf905c55592928809 260 Pfam PF00722 Glycosyl hydrolases family 16 66 254 2.1E-33 T 23-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 NIAKO_RS24025 a04e816b9dafa24bf905c55592928809 260 PANTHER PTHR10963 13 257 1.5E-53 T 23-04-2016 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 Gene3D G3DSA:3.40.50.720 2 250 5.1E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 7.8E-4 T 23-04-2016 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.53E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 249 1.8E-94 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PANTHER PTHR24322 11 142 1.6E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PANTHER PTHR24322 158 190 1.6E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.63E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.63E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.63E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 1.5E-72 T 23-04-2016 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PANTHER PTHR24322:SF328 11 142 1.6E-59 T 23-04-2016 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 PANTHER PTHR24322:SF328 158 190 1.6E-59 T 23-04-2016 NIAKO_RS29940 13d313683ac12a39ccb11eaa7d17a528 251 SUPERFAMILY SSF51735 5 250 3.06E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 SMART SM00342 234 317 1.6E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 Gene3D G3DSA:3.40.50.880 5 223 1.1E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 Pfam PF12833 Helix-turn-helix domain 240 318 3.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 PANTHER PTHR11019:SF68 83 325 4.1E-50 T 23-04-2016 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 SUPERFAMILY SSF52317 1 198 3.27E-31 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 Gene3D G3DSA:1.10.10.60 271 320 2.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 SUPERFAMILY SSF46689 271 320 5.38E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 PANTHER PTHR11019 83 325 4.1E-50 T 23-04-2016 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 Pfam PF01965 DJ-1/PfpI family 50 140 2.5E-11 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 Gene3D G3DSA:1.10.10.60 224 270 2.9E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS13885 1785dabe059beba37ad8cecfc03bddc7 327 SUPERFAMILY SSF46689 217 268 3.29E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08285 ea1ef000426f4dfdf55a088c2fdd523f 235 Pfam PF05336 Domain of unknown function (DUF718) 138 231 2.3E-11 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 NIAKO_RS08285 ea1ef000426f4dfdf55a088c2fdd523f 235 SUPERFAMILY SSF54909 134 232 9.12E-9 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 SUPERFAMILY SSF49785 12 179 5.95E-41 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 28 176 1.6E-19 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Gene3D G3DSA:2.60.40.320 168 288 4.9E-19 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 SUPERFAMILY SSF51445 289 580 1.97E-42 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 SUPERFAMILY SSF49303 182 287 1.73E-10 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 PANTHER PTHR10066 21 441 5.2E-74 T 23-04-2016 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 PANTHER PTHR10066 469 573 5.2E-74 T 23-04-2016 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Gene3D G3DSA:2.60.120.260 18 167 9.8E-40 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 290 442 5.4E-10 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Gene3D G3DSA:3.20.20.80 290 578 3.2E-40 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 PANTHER PTHR10066:SF46 21 441 5.2E-74 T 23-04-2016 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 PANTHER PTHR10066:SF46 469 573 5.2E-74 T 23-04-2016 NIAKO_RS17490 18406800dfe9881918782e991a2484a0 664 Pfam PF00703 Glycosyl hydrolases family 2 183 287 4.2E-10 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 Pfam PF00005 ABC transporter 21 169 4.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 PANTHER PTHR24220 3 221 2.2E-115 T 23-04-2016 NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 SMART SM00382 30 218 2.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 Gene3D G3DSA:3.40.50.300 1 218 3.2E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 SUPERFAMILY SSF52540 1 219 7.84E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19825 a9c34ceacffa8c0835f4bb5e16703e70 221 PANTHER PTHR24220:SF342 3 221 2.2E-115 T 23-04-2016 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 SUPERFAMILY SSF53633 6 245 7.99E-47 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PRINTS PR00474 Glutamate 5-kinase family signature 40 54 2.1E-37 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PRINTS PR00474 Glutamate 5-kinase family signature 144 171 2.1E-37 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PRINTS PR00474 Glutamate 5-kinase family signature 199 219 2.1E-37 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PRINTS PR00474 Glutamate 5-kinase family signature 112 133 2.1E-37 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PRINTS PR00474 Glutamate 5-kinase family signature 72 100 2.1E-37 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PIRSF PIRSF000729 1 341 3.4E-85 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PANTHER PTHR11063 6 309 1.6E-59 T 23-04-2016 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 Pfam PF01472 PUA domain 266 326 1.3E-13 T 23-04-2016 IPR002478 PUA domain GO:0003723 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 Gene3D G3DSA:3.40.1160.10 3 249 1.1E-32 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 SUPERFAMILY SSF88697 265 331 1.49E-12 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 Pfam PF00696 Amino acid kinase family 5 224 3.1E-30 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 SMART SM00359 266 337 1.4E-6 T 23-04-2016 IPR002478 PUA domain GO:0003723 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 PANTHER PTHR11063:SF12 6 309 1.6E-59 T 23-04-2016 NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 Gene3D G3DSA:2.30.130.10 265 340 4.4E-16 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS35890 8933d220c6c1cb6e74b694178da80f80 344 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 326 6.4E-80 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS34935 0c319743e6f33b71906d1f40a2b2ee6c 458 PANTHER PTHR30576 12 456 8.8E-109 T 23-04-2016 NIAKO_RS34935 0c319743e6f33b71906d1f40a2b2ee6c 458 PANTHER PTHR30576:SF0 12 456 8.8E-109 T 23-04-2016 NIAKO_RS34935 0c319743e6f33b71906d1f40a2b2ee6c 458 Pfam PF13727 CoA-binding domain 96 227 2.6E-7 T 23-04-2016 NIAKO_RS34935 0c319743e6f33b71906d1f40a2b2ee6c 458 Pfam PF02397 Bacterial sugar transferase 267 449 6.0E-55 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS34935 0c319743e6f33b71906d1f40a2b2ee6c 458 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 15 450 1.1E-113 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 45 163 3.0E-15 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 Gene3D G3DSA:3.40.50.720 234 282 5.8E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 Gene3D G3DSA:3.40.50.720 42 201 5.8E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 SUPERFAMILY SSF51735 34 195 9.46E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 PANTHER PTHR22604 3 198 5.2E-116 T 23-04-2016 NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 PANTHER PTHR22604 216 445 5.2E-116 T 23-04-2016 NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 SUPERFAMILY SSF55347 169 371 4.25E-16 T 23-04-2016 NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 PANTHER PTHR22604:SF101 3 198 5.2E-116 T 23-04-2016 NIAKO_RS18545 8c2bc762bb5c0783490597a4b6f8ed7f 481 PANTHER PTHR22604:SF101 216 445 5.2E-116 T 23-04-2016 NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Gene3D G3DSA:2.130.10.10 41 367 5.6E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 287 323 6.1E-10 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 166 201 1.2E-8 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 55 85 1.3E-4 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 110 142 1.2E-6 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 223 256 8.8E-12 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 353 389 1.4E-7 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 345 399 9.5E-14 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 215 270 2.6E-17 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 158 211 4.1E-17 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 46 90 1.1E-8 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 103 152 2.4E-11 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 279 328 3.9E-15 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 SUPERFAMILY SSF75011 245 422 5.62E-5 T 23-04-2016 NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 Gene3D G3DSA:2.60.40.10 448 531 5.7E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 547 624 5.2E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS21820 d0109b2c22c16672337b01429d1c872a 624 SUPERFAMILY SSF101898 34 300 2.41E-8 T 23-04-2016 NIAKO_RS28815 f24e11afcd6eba2a9cb8b469e7b8fbbe 401 SUPERFAMILY SSF51445 58 384 3.5E-48 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS28815 f24e11afcd6eba2a9cb8b469e7b8fbbe 401 Gene3D G3DSA:3.20.20.80 58 392 5.8E-60 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS28815 f24e11afcd6eba2a9cb8b469e7b8fbbe 401 PANTHER PTHR31297 80 391 2.1E-25 T 23-04-2016 NIAKO_RS28815 f24e11afcd6eba2a9cb8b469e7b8fbbe 401 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 57 367 9.2E-28 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 Gene3D G3DSA:1.10.10.10 120 179 1.9E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 SUPERFAMILY SSF88946 9 93 3.14E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 PANTHER PTHR30173:SF20 7 197 1.5E-19 T 23-04-2016 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 Pfam PF04542 Sigma-70 region 2 25 90 1.2E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 SUPERFAMILY SSF88659 96 179 1.05E-9 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 PANTHER PTHR30173 7 197 1.5E-19 T 23-04-2016 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 Gene3D G3DSA:1.10.1740.10 11 92 3.5E-15 T 23-04-2016 NIAKO_RS19315 bba1440d23c7c6fcecc655227d057fc7 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 179 1.4E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.40.170.20 965 1010 4.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.40.170.20 313 331 4.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.40.170.20 1046 1127 4.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.40.170.20 395 471 4.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.40.170.20 514 893 4.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 287 317 8.6E-20 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Pfam PF13715 CarboxypepD_reg-like domain 114 195 1.8E-15 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 PANTHER PTHR11532 552 1126 1.0E-260 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 PANTHER PTHR11532 115 458 1.0E-260 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Pfam PF07660 Secretin and TonB N terminus short domain 46 96 3.6E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Pfam PF07715 TonB-dependent Receptor Plug Domain 202 311 1.4E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 PANTHER PTHR11532:SF57 552 1126 1.0E-260 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 PANTHER PTHR11532:SF57 115 458 1.0E-260 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SMART SM00965 46 97 0.0023 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF56935 395 463 1.05E-92 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF56935 1037 1127 1.05E-92 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF56935 939 1000 1.05E-92 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF56935 508 864 1.05E-92 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF56935 193 339 1.05E-92 T 23-04-2016 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 SUPERFAMILY SSF49464 113 193 4.97E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.170.130.10 199 312 5.3E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 Gene3D G3DSA:2.60.40.1120 113 198 3.8E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17455 0bfffe61f0ea1650ce0312ac885267e5 1128 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 113 1128 2.4E-272 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS27100 1b2407c56e0308c5ff32fa36bd1202d4 515 PANTHER PTHR11819:SF94 2 445 6.2E-73 T 23-04-2016 IPR031155 Urea active transporter GO:0015204|GO:0016021|GO:0071918 NIAKO_RS27100 1b2407c56e0308c5ff32fa36bd1202d4 515 Pfam PF00474 Sodium:solute symporter family 33 450 3.9E-26 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS27100 1b2407c56e0308c5ff32fa36bd1202d4 515 PANTHER PTHR11819 2 445 6.2E-73 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 Gene3D G3DSA:1.20.950.20 43 245 8.8E-9 T 23-04-2016 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 PANTHER PTHR11921 110 438 2.2E-39 T 23-04-2016 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 Gene3D G3DSA:1.10.1060.10 273 402 1.1E-27 T 23-04-2016 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 Pfam PF13183 4Fe-4S dicluster domain 303 385 2.3E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 PANTHER PTHR11921:SF22 110 438 2.2E-39 T 23-04-2016 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 SUPERFAMILY SSF46548 272 400 5.41E-21 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS10880 284e20164bc8fbdc6b79e83ca7df544b 438 SUPERFAMILY SSF103501 1 257 5.36E-16 T 23-04-2016 IPR023234 NarG-like domain NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 PANTHER PTHR34406:SF1 7 181 2.6E-47 T 23-04-2016 NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 Gene3D G3DSA:2.40.128.110 9 178 2.2E-48 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 PANTHER PTHR34406 7 181 2.6E-47 T 23-04-2016 NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 SUPERFAMILY SSF101874 8 179 3.4E-48 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 SMART SM00867 9 178 3.6E-47 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS03835 dcc1aaa4d2326a6b7c782bbf720e4c41 181 Pfam PF04264 YceI-like domain 10 176 2.8E-36 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 246 363 4.6E-14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SUPERFAMILY SSF52172 627 749 3.56E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SUPERFAMILY SSF47226 724 847 7.23E-16 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SMART SM00086 314 356 0.0041 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Gene3D G3DSA:3.40.50.2300 629 735 8.8E-38 T 23-04-2016 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 2.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 2.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 2.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 2.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Gene3D G3DSA:3.30.565.10 447 600 2.9E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SMART SM00388 376 441 4.9E-24 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SUPERFAMILY SSF55874 430 600 4.32E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Pfam PF13426 PAS domain 252 355 2.4E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Pfam PF05227 CHASE3 domain 44 176 1.8E-12 T 23-04-2016 IPR007891 CHASE3 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Pfam PF00072 Response regulator receiver domain 631 740 5.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Gene3D G3DSA:1.10.287.130 381 437 3.7E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Gene3D G3DSA:1.20.120.160 736 872 2.7E-12 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SMART SM00448 629 741 4.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PANTHER PTHR24423 239 783 3.8E-165 T 23-04-2016 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 PANTHER PTHR24423 1 9 3.8E-165 T 23-04-2016 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SMART SM00091 241 308 3.6E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SUPERFAMILY SSF55785 242 344 2.27E-18 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 441 7.0E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Gene3D G3DSA:3.30.450.20 246 380 4.1E-18 T 23-04-2016 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SUPERFAMILY SSF47384 362 441 4.9E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 599 4.2E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36415 ebedd23681ffa215ccbc055f64a4574b 876 SMART SM00387 488 604 6.5E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF56935 920 964 3.11E-72 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF56935 341 429 3.11E-72 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF56935 479 823 3.11E-72 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF56935 1001 1094 3.11E-72 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF56935 112 281 3.11E-72 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 35 1094 3.0E-218 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.40.170.20 995 1094 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.40.170.20 260 295 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.40.170.20 472 830 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.40.170.20 928 954 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.40.170.20 350 440 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532 420 538 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532 224 395 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532 614 881 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532 900 1092 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532 10 207 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532:SF57 420 538 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532:SF57 224 395 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532:SF57 614 881 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532:SF57 900 1092 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 PANTHER PTHR11532:SF57 10 207 4.9E-211 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 257 2.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 SUPERFAMILY SSF49464 33 126 7.32E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 233 263 4.3E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.170.130.10 135 259 1.3E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Pfam PF13715 CarboxypepD_reg-like domain 34 116 7.6E-9 T 23-04-2016 NIAKO_RS03585 7b807dbbb13a7cfeb7224344ffd06f17 1094 Gene3D G3DSA:2.60.40.1120 33 125 1.4E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS34185 1ad3c37574d02f875452869536cf6db8 164 PIRSF PIRSF034110 1 159 2.9E-22 T 23-04-2016 IPR009593 Protein of unknown function DUF1203 NIAKO_RS34185 1ad3c37574d02f875452869536cf6db8 164 Pfam PF06718 Protein of unknown function (DUF1203) 39 158 3.2E-31 T 23-04-2016 IPR009593 Protein of unknown function DUF1203 NIAKO_RS16840 c1a1ddc77a6c29dbecf2844e4aeee24b 110 Pfam PF05154 TM2 domain 44 92 9.1E-16 T 23-04-2016 IPR007829 TM2 domain NIAKO_RS16840 c1a1ddc77a6c29dbecf2844e4aeee24b 110 PANTHER PTHR21016 43 94 1.8E-14 T 23-04-2016 NIAKO_RS16840 c1a1ddc77a6c29dbecf2844e4aeee24b 110 Pfam PF13240 zinc-ribbon domain 2 23 1.9E-8 T 23-04-2016 IPR026870 Zinc-ribbon domain NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 5.5E-5 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 9.7E-7 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 PANTHER PTHR23416:SF23 1 203 2.8E-32 T 23-04-2016 NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 PANTHER PTHR23416 1 203 2.8E-32 T 23-04-2016 NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 Gene3D G3DSA:3.40.50.20 1 70 1.6E-18 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 155 183 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 SUPERFAMILY SSF51161 3 201 2.63E-45 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 2 195 2.5E-67 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like NIAKO_RS26225 ce5b8cdbc5ff996e878d19e407ec7cc0 203 Gene3D G3DSA:2.160.10.10 71 202 6.2E-34 T 23-04-2016 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 SUPERFAMILY SSF51215 63 175 9.42E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 Gene3D G3DSA:1.10.10.60 252 299 1.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 PANTHER PTHR11019 47 300 5.6E-29 T 23-04-2016 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 Pfam PF12833 Helix-turn-helix domain 221 298 2.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 8.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 8.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 SMART SM00342 214 297 4.7E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 PANTHER PTHR11019:SF50 47 300 5.6E-29 T 23-04-2016 NIAKO_RS21055 a7d4aa7318b666f76f55ee6d708c32f3 301 SUPERFAMILY SSF46689 252 300 1.22E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 PANTHER PTHR10000 139 219 1.6E-18 T 23-04-2016 NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 Gene3D G3DSA:3.40.50.300 250 368 6.8E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 110 186 8.8E-14 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 SUPERFAMILY SSF52540 231 442 3.19E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 SUPERFAMILY SSF56784 1 217 1.12E-41 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 72 5.8E-7 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 Pfam PF08282 haloacid dehalogenase-like hydrolase 102 213 3.8E-21 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 Gene3D G3DSA:3.40.50.1000 2 72 4.8E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 Gene3D G3DSA:3.40.50.1000 123 219 4.8E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS07740 707e18730c7f844ef783199937e436a2 565 SMART SM00382 249 433 0.0013 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 PANTHER PTHR34218:SF2 58 814 3.0E-150 T 23-04-2016 NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 PIRSF PIRSF001227 24 810 2.7E-159 T 23-04-2016 IPR014395 Penicillin acylase GO:0016811 NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 PANTHER PTHR34218 58 814 3.0E-150 T 23-04-2016 NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 SUPERFAMILY SSF56235 60 799 2.83E-181 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 Gene3D G3DSA:3.60.20.10 287 362 5.9E-89 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 Gene3D G3DSA:3.60.20.10 444 654 5.9E-89 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 Gene3D G3DSA:2.30.120.10 363 433 2.6E-10 T 23-04-2016 NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 Pfam PF01804 Penicillin amidase 63 798 1.2E-193 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NIAKO_RS07560 a93f198e1e27cc86f9ed7072d749c025 814 Gene3D G3DSA:1.10.439.10 55 208 2.7E-41 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 Hamap MF_01151 Protein GrpE [grpE]. 2 183 17.562 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 SUPERFAMILY SSF58014 35 126 4.45E-23 T 23-04-2016 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 PANTHER PTHR21237 35 183 3.0E-38 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 ProSitePatterns PS01071 grpE protein signature. 137 181 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 Gene3D G3DSA:3.90.20.20 34 124 2.0E-24 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 PRINTS PR00773 GrpE protein signature 134 149 4.1E-22 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 PRINTS PR00773 GrpE protein signature 162 181 4.1E-22 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 PRINTS PR00773 GrpE protein signature 53 69 4.1E-22 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 PRINTS PR00773 GrpE protein signature 81 96 4.1E-22 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 Pfam PF01025 GrpE 30 183 3.2E-45 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 SUPERFAMILY SSF51064 127 183 1.96E-12 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 NIAKO_RS27070 cd243cdb620e08c7786bb6120087e531 183 Gene3D G3DSA:2.30.22.10 126 183 3.1E-17 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 PANTHER PTHR21071 3 339 2.8E-136 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 SUPERFAMILY SSF56194 212 339 4.58E-46 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 216 339 3.5E-34 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Pfam PF01565 FAD binding domain 24 144 2.6E-18 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Gene3D G3DSA:3.90.78.10 238 339 5.0E-40 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Gene3D G3DSA:3.30.465.10 78 237 3.6E-50 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 10 338 3.7E-72 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 SUPERFAMILY SSF56176 10 198 2.89E-41 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 78.793 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 Gene3D G3DSA:3.30.43.10 8 72 2.5E-18 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS14365 cf92d6930eb0486f49016935a35eb7a4 339 PANTHER PTHR21071:SF6 3 339 2.8E-136 T 23-04-2016 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 SUPERFAMILY SSF52172 7 138 1.42E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 Gene3D G3DSA:1.10.10.10 159 213 9.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 PANTHER PTHR26402 8 213 1.1E-52 T 23-04-2016 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 206 8.4E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 Pfam PF00072 Response regulator receiver domain 10 121 1.2E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 SUPERFAMILY SSF46894 141 213 1.36E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 PANTHER PTHR26402:SF151 8 213 1.1E-52 T 23-04-2016 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 SMART SM00448 8 121 2.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 SMART SM00421 150 207 1.9E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06875 b42af85c88ce1bcc2887022d5968ddd1 213 Gene3D G3DSA:3.40.50.2300 6 158 1.4E-33 T 23-04-2016 NIAKO_RS25820 1d2ac58dce64fda4042ec7e2e6749232 628 Pfam PF07980 SusD family 327 627 2.9E-55 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS25820 1d2ac58dce64fda4042ec7e2e6749232 628 Pfam PF14322 Starch-binding associating with outer membrane 60 246 1.4E-21 T 23-04-2016 NIAKO_RS25820 1d2ac58dce64fda4042ec7e2e6749232 628 SUPERFAMILY SSF48452 26 627 3.92E-98 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25820 1d2ac58dce64fda4042ec7e2e6749232 628 Gene3D G3DSA:1.25.40.10 228 367 7.0E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25820 1d2ac58dce64fda4042ec7e2e6749232 628 Gene3D G3DSA:1.25.40.10 461 552 7.0E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 SUPERFAMILY SSF53474 9 263 8.79E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 PANTHER PTHR10992 3 265 5.6E-41 T 23-04-2016 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 Gene3D G3DSA:3.40.50.1820 6 263 1.4E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 Pfam PF00561 alpha/beta hydrolase fold 24 116 1.3E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 9.3E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 9.3E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 9.3E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS25015 0ad4c2c675572d56c38be9710ab99e1a 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 9.3E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS27380 74bb9965a487918432353821dc9a6814 251 PANTHER PTHR10108 50 154 2.2E-12 T 23-04-2016 NIAKO_RS27380 74bb9965a487918432353821dc9a6814 251 Pfam PF13489 Methyltransferase domain 51 200 1.8E-15 T 23-04-2016 NIAKO_RS27380 74bb9965a487918432353821dc9a6814 251 SUPERFAMILY SSF53335 37 217 1.08E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27380 74bb9965a487918432353821dc9a6814 251 Gene3D G3DSA:3.40.50.150 28 183 2.7E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35735 1a971b53e13b8be9fc7be60f1505600d 438 PANTHER PTHR30354:SF1 1 438 7.3E-168 T 23-04-2016 NIAKO_RS35735 1a971b53e13b8be9fc7be60f1505600d 438 Pfam PF02447 GntP family permease 1 434 9.0E-145 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS35735 1a971b53e13b8be9fc7be60f1505600d 438 PIRSF PIRSF002746 1 438 3.5E-139 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS35735 1a971b53e13b8be9fc7be60f1505600d 438 PANTHER PTHR30354 1 438 7.3E-168 T 23-04-2016 NIAKO_RS35735 1a971b53e13b8be9fc7be60f1505600d 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 435 3.1E-148 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1111 4.6E-205 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Pfam PF07715 TonB-dependent Receptor Plug Domain 116 240 3.4E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 1 176 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 530 587 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 194 330 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 361 425 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 623 838 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532:SF57 857 1109 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 1 176 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 530 587 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 194 330 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 361 425 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 623 838 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 PANTHER PTHR11532 857 1109 4.4E-188 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.170.130.10 113 240 5.7E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF56935 106 263 3.22E-76 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF56935 487 830 3.22E-76 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF56935 920 966 3.22E-76 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF56935 371 459 3.22E-76 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF56935 1026 1111 3.22E-76 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.60.40.1120 27 112 2.7E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 216 246 1.6E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Pfam PF13715 CarboxypepD_reg-like domain 27 108 2.2E-13 T 23-04-2016 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.40.170.20 241 263 1.3E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.40.170.20 1017 1111 1.3E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.40.170.20 931 956 1.3E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 Gene3D G3DSA:2.40.170.20 380 843 1.3E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS02755 25f135e41c65fb572c5aa7240f85393d 1111 SUPERFAMILY SSF49464 26 106 5.23E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 121 149 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 SUPERFAMILY SSF51161 16 245 2.5E-58 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 Gene3D G3DSA:2.160.10.10 82 246 7.8E-52 T 23-04-2016 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 Gene3D G3DSA:1.10.166.10 1 63 1.5E-21 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 1 62 3.0E-20 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 PANTHER PTHR19136:SF52 4 262 2.5E-75 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 PANTHER PTHR19136 4 262 2.5E-75 T 23-04-2016 NIAKO_RS09765 6608597d198614e01514fcfdf686538b 268 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 162 197 6.3E-11 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 3.9E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 5 1032 9.4E-291 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82693 562 661 1.46E-10 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82693 270 326 1.31E-15 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82693 140 183 1.31E-15 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82866 804 1030 1.83E-52 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:1.10.3850.10 810 1027 1.7E-57 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:1.10.3850.10 278 504 7.5E-54 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82866 292 502 2.75E-33 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82693 45 130 3.66E-18 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82714 185 265 1.29E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Pfam PF00873 AcrB/AcrD/AcrF family 8 1024 1.2E-258 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PANTHER PTHR32063 5 1026 0.0 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 PANTHER PTHR32063:SF12 5 1026 0.0 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 SUPERFAMILY SSF82714 719 802 2.49E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:3.30.70.1430 45 142 8.6E-22 T 23-04-2016 NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:3.30.2090.10 718 802 7.0E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:3.30.2090.10 185 267 2.2E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS12075 fa61d40dbe7ccbe67d2bdb62e9f01050 1035 Gene3D G3DSA:3.30.70.1430 564 655 8.5E-8 T 23-04-2016 NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 PANTHER PTHR23515:SF2 8 413 1.6E-135 T 23-04-2016 NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 PANTHER PTHR23515 8 413 1.6E-135 T 23-04-2016 NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 SUPERFAMILY SSF103473 13 420 5.89E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 Gene3D G3DSA:1.20.1250.20 18 207 9.2E-24 T 23-04-2016 NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 Gene3D G3DSA:1.20.1250.20 230 418 4.6E-18 T 23-04-2016 NIAKO_RS26145 b4f2a65c8690c91987aa639f8dbc6f09 428 Pfam PF07690 Major Facilitator Superfamily 25 377 1.5E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 Pfam PF16586 Domain of unknown function (DUF5060) 23 90 1.0E-22 T 23-04-2016 IPR032260 Domain of unknown function DUF5060 NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 SUPERFAMILY SSF51445 114 373 3.16E-8 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 PANTHER PTHR37836 20 509 1.8E-66 T 23-04-2016 NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 Gene3D G3DSA:3.20.20.80 124 285 2.2E-6 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 PANTHER PTHR37836:SF2 20 509 1.8E-66 T 23-04-2016 NIAKO_RS20585 8a1d36155a0f172ef64992f1f4fab7f3 535 Pfam PF13204 Protein of unknown function (DUF4038) 120 385 2.2E-18 T 23-04-2016 IPR025277 Putative glycohydrolase domain DUF4038 NIAKO_RS35660 bb61c16e439afdc7ec30332bb0d44518 409 Pfam PF01966 HD domain 32 129 9.5E-9 T 23-04-2016 IPR006674 HD domain NIAKO_RS35660 bb61c16e439afdc7ec30332bb0d44518 409 SUPERFAMILY SSF109604 8 194 2.32E-35 T 23-04-2016 NIAKO_RS35660 bb61c16e439afdc7ec30332bb0d44518 409 Gene3D G3DSA:1.10.3210.10 2 148 1.1E-24 T 23-04-2016 IPR006674 HD domain NIAKO_RS35660 bb61c16e439afdc7ec30332bb0d44518 409 SMART SM00471 26 140 3.3E-7 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Pfam PF13438 Domain of unknown function (DUF4113) 369 418 6.7E-20 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 PANTHER PTHR11076:SF40 1 393 3.3E-137 T 23-04-2016 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 SUPERFAMILY SSF56672 1 234 3.47E-66 T 23-04-2016 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Gene3D G3DSA:3.30.1490.100 249 350 9.9E-6 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Pfam PF00817 impB/mucB/samB family 5 149 3.2E-35 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Gene3D G3DSA:1.10.150.20 168 234 1.7E-12 T 23-04-2016 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 PANTHER PTHR11076 1 393 3.3E-137 T 23-04-2016 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Gene3D G3DSA:3.30.70.270 67 156 7.5E-24 T 23-04-2016 NIAKO_RS26545 80e8e0cc342b53c5ead7001f7ddc3c46 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 354 7.1E-9 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Pfam PF03144 Elongation factor Tu domain 2 324 391 6.9E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SUPERFAMILY SSF54211 479 600 3.29E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Pfam PF00009 Elongation factor Tu GTP binding domain 6 282 5.7E-67 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SUPERFAMILY SSF50447 265 404 1.35E-35 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 181 3.3E-34 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Gene3D G3DSA:3.30.70.240 601 684 4.7E-26 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Hamap MF_00054_B Elongation factor G [fusA]. 3 687 90.906 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SMART SM00838 601 686 1.3E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PANTHER PTHR23115 1 178 1.1E-279 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PANTHER PTHR23115 255 684 1.1E-279 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SUPERFAMILY SSF54980 601 684 3.98E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PANTHER PTHR23115:SF66 1 178 1.1E-279 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PANTHER PTHR23115:SF66 255 684 1.1E-279 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SMART SM00889 480 599 2.3E-42 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Gene3D G3DSA:3.40.50.300 1 287 8.3E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Pfam PF14492 Elongation Factor G, domain II 404 477 4.8E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Gene3D G3DSA:3.30.70.870 406 480 7.0E-30 T 23-04-2016 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SUPERFAMILY SSF54980 402 480 1.15E-21 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Pfam PF00679 Elongation factor G C-terminus 601 684 5.6E-25 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Gene3D G3DSA:3.30.230.10 484 600 6.6E-36 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 SUPERFAMILY SSF52540 4 282 9.06E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 684 5.4E-270 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Pfam PF03764 Elongation factor G, domain IV 479 598 1.8E-33 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NIAKO_RS31435 0412c97bab35fb36643f03b27b6f09bd 687 Gene3D G3DSA:2.40.30.10 305 405 5.1E-34 T 23-04-2016 NIAKO_RS09815 6e8bd2cb2b4bd58f837c1e60a9388262 493 Pfam PF14322 Starch-binding associating with outer membrane 22 229 3.7E-38 T 23-04-2016 NIAKO_RS09815 6e8bd2cb2b4bd58f837c1e60a9388262 493 Pfam PF07980 SusD family 301 458 1.5E-7 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS09815 6e8bd2cb2b4bd58f837c1e60a9388262 493 SUPERFAMILY SSF48452 19 485 6.45E-48 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09815 6e8bd2cb2b4bd58f837c1e60a9388262 493 Gene3D G3DSA:1.25.40.10 210 408 3.9E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Pfam PF12833 Helix-turn-helix domain 32 111 8.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 197 273 1.4E-28 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Gene3D G3DSA:1.10.10.60 66 110 2.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Gene3D G3DSA:1.10.10.10 196 279 2.3E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 SUPERFAMILY SSF46767 196 276 1.2E-27 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 198 276 3.1E-26 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 247 253 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 SUPERFAMILY SSF46689 64 113 7.62E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 PANTHER PTHR10815:SF5 86 280 6.6E-61 T 23-04-2016 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 PANTHER PTHR10815 86 280 6.6E-61 T 23-04-2016 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Gene3D G3DSA:1.10.10.60 8 65 6.0E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 SUPERFAMILY SSF46689 9 60 6.72E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 SUPERFAMILY SSF53155 116 195 1.57E-17 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 Gene3D G3DSA:3.30.160.70 111 195 4.1E-29 T 23-04-2016 NIAKO_RS35450 571be19fda4ac0f8d83052d16a4072d9 284 SMART SM00342 26 110 3.3E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 Pfam PF01966 HD domain 29 128 8.6E-8 T 23-04-2016 IPR006674 HD domain NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 PANTHER PTHR33594 5 217 2.2E-74 T 23-04-2016 NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 Gene3D G3DSA:1.10.3210.10 185 215 9.4E-50 T 23-04-2016 IPR006674 HD domain NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 Gene3D G3DSA:1.10.3210.10 1 142 9.4E-50 T 23-04-2016 IPR006674 HD domain NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 SUPERFAMILY SSF109604 1 215 1.83E-72 T 23-04-2016 NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 PANTHER PTHR33594:SF1 5 217 2.2E-74 T 23-04-2016 NIAKO_RS16980 f8e748b1a257471a0a1ad2a8877b2b0b 217 SMART SM00471 22 138 8.1E-7 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS24890 ee271cc8002688634e75980d4c4fa92c 339 SUPERFAMILY SSF56281 11 316 3.73E-53 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24890 ee271cc8002688634e75980d4c4fa92c 339 PANTHER PTHR11203 10 196 1.3E-59 T 23-04-2016 NIAKO_RS24890 ee271cc8002688634e75980d4c4fa92c 339 Gene3D G3DSA:3.60.15.10 22 192 8.2E-16 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24890 ee271cc8002688634e75980d4c4fa92c 339 PANTHER PTHR11203:SF35 10 196 1.3E-59 T 23-04-2016 NIAKO_RS24890 ee271cc8002688634e75980d4c4fa92c 339 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 3 326 7.5E-143 T 23-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated NIAKO_RS14035 178296b00d5c187166d76a1660e2340c 123 Pfam PF07766 LETM1-like protein 20 92 2.6E-6 T 23-04-2016 IPR011685 LETM1-like NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 Pfam PF03652 Holliday junction resolvase 3 134 6.9E-36 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 Gene3D G3DSA:3.30.420.140 2 135 7.4E-39 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 SUPERFAMILY SSF53098 2 136 7.59E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 PANTHER PTHR33317 3 137 4.1E-29 T 23-04-2016 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 20.725 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 SMART SM00732 2 100 7.8E-17 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NIAKO_RS21740 c053f44742fdda5a3b7f22890e9aeb64 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 133 4.1E-19 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 Pfam PF00293 NUDIX domain 31 160 4.2E-21 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 Gene3D G3DSA:3.90.79.10 6 175 1.5E-52 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 5 175 32.348 T 23-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 SUPERFAMILY SSF55811 7 169 1.76E-43 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 PANTHER PTHR10885 7 162 4.7E-51 T 23-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 7 162 9.9E-39 T 23-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 NIAKO_RS33420 1e1b797fb1f3c81b0eb55593b9ac3ede 180 PIRSF PIRSF018427 1 178 1.4E-52 T 23-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 1.4E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 SUPERFAMILY SSF52172 1 123 1.42E-35 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 SUPERFAMILY SSF46894 131 229 6.8E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 PANTHER PTHR26402 4 231 6.4E-64 T 23-04-2016 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 SMART SM00448 4 115 9.6E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 Gene3D G3DSA:3.40.50.2300 2 122 3.3E-35 T 23-04-2016 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 Gene3D G3DSA:1.10.10.10 133 229 3.6E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 SMART SM00862 153 228 2.8E-9 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS20650 2c0c2760e81d4bcfce5d2f13294b339d 232 PANTHER PTHR26402:SF606 4 231 6.4E-64 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Pfam PF13418 Galactose oxidase, central domain 325 368 7.9E-5 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Gene3D G3DSA:2.120.10.80 34 299 7.0E-25 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Gene3D G3DSA:2.120.10.80 318 431 2.3E-7 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 PANTHER PTHR23244 583 588 1.0E-23 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 PANTHER PTHR23244 31 84 1.0E-23 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 PANTHER PTHR23244 102 228 1.0E-23 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 PANTHER PTHR23244 246 298 1.0E-23 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 PANTHER PTHR23244 314 430 1.0E-23 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 SUPERFAMILY SSF117281 34 370 9.68E-29 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Pfam PF13415 Galactose oxidase, central domain 51 80 1.5E-5 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Pfam PF13415 Galactose oxidase, central domain 266 295 6.2E-5 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 Pfam PF13964 Kelch motif 119 157 3.3E-6 T 23-04-2016 NIAKO_RS02490 9213f03c2a98a765cdb64825f3fb1e31 607 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 537 603 6.9E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS19995 4990b27acf6298bc4acb1a042d633313 435 Gene3D G3DSA:1.20.1600.10 3 426 6.6E-44 T 23-04-2016 NIAKO_RS19995 4990b27acf6298bc4acb1a042d633313 435 SUPERFAMILY SSF56954 7 428 8.24E-51 T 23-04-2016 NIAKO_RS19995 4990b27acf6298bc4acb1a042d633313 435 PANTHER PTHR30203 5 426 1.2E-28 T 23-04-2016 NIAKO_RS19995 4990b27acf6298bc4acb1a042d633313 435 Pfam PF02321 Outer membrane efflux protein 11 213 4.3E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19995 4990b27acf6298bc4acb1a042d633313 435 Pfam PF02321 Outer membrane efflux protein 238 419 5.1E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 PANTHER PTHR21499 3 388 1.5E-76 T 23-04-2016 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 Gene3D G3DSA:3.40.1160.10 96 296 1.8E-54 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 Gene3D G3DSA:3.40.1160.10 2 48 1.8E-54 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 Pfam PF00696 Amino acid kinase family 3 281 4.6E-46 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 PIRSF PIRSF000726 1 418 1.2E-66 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 SUPERFAMILY SSF53633 1 296 4.32E-70 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 PANTHER PTHR21499:SF3 3 388 1.5E-76 T 23-04-2016 NIAKO_RS10320 eac829b49922ffd59afb7b111b1117c5 422 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 409 7.2E-79 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 PANTHER PTHR30173 1 185 4.9E-32 T 23-04-2016 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 PANTHER PTHR30173:SF20 1 185 4.9E-32 T 23-04-2016 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 10 167 2.1E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 Gene3D G3DSA:1.10.10.10 107 168 2.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 Pfam PF04542 Sigma-70 region 2 16 80 3.5E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 Gene3D G3DSA:1.10.1740.10 2 105 2.1E-19 T 23-04-2016 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 SUPERFAMILY SSF88659 103 167 1.01E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 166 1.2E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 Pfam PF08281 Sigma-70, region 4 112 164 3.1E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20220 86978d1d0bab290f644593bdecf8f433 187 SUPERFAMILY SSF88946 2 93 8.37E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21410 e61192ed87821371582563001649551a 221 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 135 1.5E-30 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS21410 e61192ed87821371582563001649551a 221 Gene3D G3DSA:1.10.10.10 6 75 9.0E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21410 e61192ed87821371582563001649551a 221 SUPERFAMILY SSF47979 68 138 2.88E-26 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS21410 e61192ed87821371582563001649551a 221 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 62 2.3E-15 T 23-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 NIAKO_RS21410 e61192ed87821371582563001649551a 221 SMART SM00529 27 126 1.4E-32 T 23-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 NIAKO_RS21410 e61192ed87821371582563001649551a 221 SUPERFAMILY SSF46785 7 64 1.04E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21410 e61192ed87821371582563001649551a 221 Pfam PF04023 FeoA domain 148 218 1.7E-6 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NIAKO_RS21410 e61192ed87821371582563001649551a 221 SMART SM00899 146 219 0.0019 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NIAKO_RS21410 e61192ed87821371582563001649551a 221 PANTHER PTHR33238 4 221 4.4E-55 T 23-04-2016 NIAKO_RS21410 e61192ed87821371582563001649551a 221 PANTHER PTHR33238:SF1 4 221 4.4E-55 T 23-04-2016 NIAKO_RS21410 e61192ed87821371582563001649551a 221 Gene3D G3DSA:1.10.60.10 76 138 1.4E-30 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS05985 9434a77bc5dea52c599f73edbfbec44b 546 Gene3D G3DSA:1.25.40.10 354 458 1.5E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05985 9434a77bc5dea52c599f73edbfbec44b 546 Gene3D G3DSA:1.25.40.10 189 300 1.5E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05985 9434a77bc5dea52c599f73edbfbec44b 546 Pfam PF07980 SusD family 294 546 2.9E-34 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS05985 9434a77bc5dea52c599f73edbfbec44b 546 Pfam PF14322 Starch-binding associating with outer membrane 82 208 1.8E-15 T 23-04-2016 NIAKO_RS05985 9434a77bc5dea52c599f73edbfbec44b 546 SUPERFAMILY SSF48452 17 546 4.43E-98 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13685 52e39de656817786da7dc08ffd11bf45 671 Gene3D G3DSA:2.60.40.670 409 494 2.8E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13685 52e39de656817786da7dc08ffd11bf45 671 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 586 665 1.3E-13 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS13685 52e39de656817786da7dc08ffd11bf45 671 Pfam PF13585 C-terminal domain of CHU protein family 585 668 2.3E-21 T 23-04-2016 NIAKO_RS13685 52e39de656817786da7dc08ffd11bf45 671 SUPERFAMILY SSF49265 491 562 1.46E-5 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS22655 1b07a1051fe313a1648a747ba3a3f464 266 PANTHER PTHR12277 6 266 6.4E-50 T 23-04-2016 NIAKO_RS22655 1b07a1051fe313a1648a747ba3a3f464 266 Pfam PF12146 Serine aminopeptidase, S33 71 182 2.2E-16 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS22655 1b07a1051fe313a1648a747ba3a3f464 266 SUPERFAMILY SSF53474 23 256 1.07E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22655 1b07a1051fe313a1648a747ba3a3f464 266 Gene3D G3DSA:3.40.50.1820 49 258 1.5E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS32855 9251ccce357e3c65ac5a6f766fb20503 294 PIRSF PIRSF026649 1 289 2.0E-61 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NIAKO_RS32855 9251ccce357e3c65ac5a6f766fb20503 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 281 3.5E-35 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NIAKO_RS32855 9251ccce357e3c65ac5a6f766fb20503 294 PANTHER PTHR30606 1 285 3.1E-49 T 23-04-2016 NIAKO_RS32855 9251ccce357e3c65ac5a6f766fb20503 294 PANTHER PTHR30606:SF2 1 285 3.1E-49 T 23-04-2016 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 SUPERFAMILY SSF46689 269 317 2.42E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 Gene3D G3DSA:1.10.10.60 268 318 1.3E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 PANTHER PTHR11019:SF65 126 368 3.7E-36 T 23-04-2016 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 PANTHER PTHR11019 126 368 3.7E-36 T 23-04-2016 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 SUPERFAMILY SSF46689 320 368 3.9E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 SUPERFAMILY SSF51215 108 249 1.83E-24 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 320 362 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 Pfam PF02311 AraC-like ligand binding domain 124 202 3.6E-14 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 Gene3D G3DSA:1.10.10.60 319 368 7.0E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 SMART SM00342 283 366 4.1E-29 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 Gene3D G3DSA:2.60.120.280 101 251 2.3E-25 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 350 366 8.9E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 335 350 8.9E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS18525 27bbd48d42d571cced9dd4ea02c586b3 369 Pfam PF12833 Helix-turn-helix domain 289 368 1.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SUPERFAMILY SSF46785 276 350 1.59E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SUPERFAMILY SSF52172 1 125 5.69E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 PANTHER PTHR26402 2 120 2.5E-38 T 23-04-2016 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Pfam PF00072 Response regulator receiver domain 4 116 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Gene3D G3DSA:3.40.50.2300 2 124 3.2E-37 T 23-04-2016 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SMART SM00100 139 258 3.3E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SUPERFAMILY SSF51206 159 273 3.27E-27 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 PANTHER PTHR26402:SF50 2 120 2.5E-38 T 23-04-2016 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Pfam PF13545 Crp-like helix-turn-helix domain 279 350 5.2E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Gene3D G3DSA:2.60.120.10 158 272 1.5E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SMART SM00448 2 115 6.5E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 SMART SM00419 295 343 2.9E-9 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Pfam PF00027 Cyclic nucleotide-binding domain 160 243 1.9E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09535 9498308f9845ea69316cedb9fa6b7709 352 Gene3D G3DSA:1.10.10.10 276 350 1.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Pfam PF00708 Acylphosphatase 4 89 1.6E-15 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 PANTHER PTHR10029 5 769 7.5E-243 T 23-04-2016 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Pfam PF01300 Telomere recombination 212 389 4.0E-47 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Pfam PF07503 HypF finger 108 141 4.4E-15 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Pfam PF07503 HypF finger 159 187 4.5E-6 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 PANTHER PTHR10029:SF4 5 769 7.5E-243 T 23-04-2016 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Gene3D G3DSA:3.30.70.100 2 89 3.5E-19 T 23-04-2016 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 SUPERFAMILY SSF55821 176 395 1.28E-41 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 SUPERFAMILY SSF54975 1 90 3.92E-18 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 752 3.0E-208 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 Gene3D G3DSA:3.90.870.10 206 382 8.5E-42 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS06230 9e29ddf782c0fecef665e3aa06e45863 773 PIRSF PIRSF006256 1 764 8.9E-234 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 SUPERFAMILY SSF52788 1 149 3.27E-43 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 Gene3D G3DSA:3.40.50.270 1 149 1.1E-47 T 23-04-2016 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PANTHER PTHR11717 1 161 1.3E-37 T 23-04-2016 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.5E-15 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 1.5E-15 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 1.5E-15 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 44 60 1.5E-15 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 PANTHER PTHR11717:SF7 1 161 1.3E-37 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 SMART SM00226 1 149 1.4E-44 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS34740 23181e8aab1f17badff7a8800d3d8af2 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 145 6.8E-35 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 6 714 3.0E-269 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 PANTHER PTHR31998:SF0 4 715 0.0 T 23-04-2016 NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 PANTHER PTHR31998 4 715 0.0 T 23-04-2016 NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 PIRSF PIRSF001265 1 716 2.1E-264 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 713 24.445 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NIAKO_RS05810 c6633b6a50cd803e8383269d117b5d9e 716 Pfam PF03030 Inorganic H+ pyrophosphatase 13 708 1.2E-269 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 SUPERFAMILY SSF48576 18 339 1.98E-65 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 Gene3D G3DSA:1.10.600.10 16 339 6.2E-67 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 Pfam PF00348 Polyprenyl synthetase 47 276 3.4E-54 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 107 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 PANTHER PTHR12001 18 340 4.3E-62 T 23-04-2016 IPR017446 Polyprenyl synthetase-related NIAKO_RS05155 93d51f3f57fc9129227daa3a64b8db18 340 PANTHER PTHR12001:SF47 18 340 4.3E-62 T 23-04-2016 NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 Pfam PF01230 HIT domain 11 97 2.8E-14 T 23-04-2016 IPR001310 Histidine triad (HIT) protein NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 PANTHER PTHR23089 1 97 3.6E-28 T 23-04-2016 IPR001310 Histidine triad (HIT) protein NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 SUPERFAMILY SSF54197 1 129 5.26E-30 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 PRINTS PR00332 Histidine triad family signature 86 96 4.4E-14 T 23-04-2016 IPR001310 Histidine triad (HIT) protein NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 PRINTS PR00332 Histidine triad family signature 24 42 4.4E-14 T 23-04-2016 IPR001310 Histidine triad (HIT) protein NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 PRINTS PR00332 Histidine triad family signature 3 19 4.4E-14 T 23-04-2016 IPR001310 Histidine triad (HIT) protein NIAKO_RS34120 3c33c521fd4b42c99a83bb93c3a69be8 129 Gene3D G3DSA:3.30.428.10 2 117 2.7E-26 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 NIAKO_RS08155 c33bb3460ec8d27d5244c0d812bef9ea 225 Pfam PF16266 Domain of unknown function (DUF4919) 31 210 1.3E-45 T 23-04-2016 IPR032578 Protein of unknown function DUF4919 NIAKO_RS08155 c33bb3460ec8d27d5244c0d812bef9ea 225 Gene3D G3DSA:1.25.40.10 89 143 1.6E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08155 c33bb3460ec8d27d5244c0d812bef9ea 225 SUPERFAMILY SSF48452 90 144 1.29E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 SUPERFAMILY SSF52518 233 497 3.14E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154:SF14 254 420 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154:SF14 451 615 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154:SF14 8 230 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 517 586 2.1E-8 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Gene3D G3DSA:3.40.920.10 12 212 2.0E-29 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Gene3D G3DSA:3.40.50.970 223 424 8.5E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Gene3D G3DSA:3.40.50.920 511 614 1.4E-13 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 SUPERFAMILY SSF52922 511 615 9.26E-15 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 SUPERFAMILY SSF53323 13 214 7.85E-20 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154 254 420 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154 451 615 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 PANTHER PTHR32154 8 230 2.6E-206 T 23-04-2016 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 19 210 3.2E-32 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 10 609 7.1E-202 T 23-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 NIAKO_RS32690 464af71f802918a1ddaec0d97b3b59d9 618 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 260 476 4.0E-51 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 NIAKO_RS25960 e6e581946b182dc78a6ac5c4260b7c9e 234 SMART SM00382 26 205 5.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS25960 e6e581946b182dc78a6ac5c4260b7c9e 234 Gene3D G3DSA:3.40.50.300 2 218 1.2E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25960 e6e581946b182dc78a6ac5c4260b7c9e 234 Pfam PF00005 ABC transporter 17 157 9.6E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS25960 e6e581946b182dc78a6ac5c4260b7c9e 234 SUPERFAMILY SSF52540 2 216 4.02E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS25960 e6e581946b182dc78a6ac5c4260b7c9e 234 PANTHER PTHR24220 3 206 7.4E-58 T 23-04-2016 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 Pfam PF16313 Met-zincin 441 745 1.3E-117 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 Gene3D G3DSA:3.40.390.10 270 534 4.8E-15 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 Pfam PF17162 Domain of unknown function (DUF5118) 49 98 2.3E-22 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 PANTHER PTHR38478 53 765 1.3E-139 T 23-04-2016 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 SUPERFAMILY SSF55486 313 535 2.25E-23 T 23-04-2016 NIAKO_RS34835 944fa3917e9b872fadf3a454cd6a2239 844 Pfam PF17148 Domain of unknown function (DUF5117) 111 306 4.8E-70 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031 1292 1317 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031 478 571 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031 991 1092 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031 191 278 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031 99 175 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Gene3D G3DSA:3.40.50.300 76 280 3.2E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Pfam PF00271 Helicase conserved C-terminal domain 991 1059 2.4E-9 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 SUPERFAMILY SSF52540 97 153 8.55E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 SUPERFAMILY SSF52540 976 1110 8.55E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 SUPERFAMILY SSF52540 76 281 6.3E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 SMART SM00487 73 316 3.3E-15 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Pfam PF00270 DEAD/DEAH box helicase 95 279 1.4E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031:SF307 1292 1317 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031:SF307 478 571 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031:SF307 991 1092 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031:SF307 191 278 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 PANTHER PTHR24031:SF307 99 175 7.1E-27 T 23-04-2016 NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 SMART SM00490 973 1060 6.7E-13 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Pfam PF09369 Domain of unknown function (DUF1998) 1549 1630 3.2E-9 T 23-04-2016 IPR018973 DEAD/DEAH-box helicase, putative NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Gene3D G3DSA:3.40.50.300 618 643 2.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23655 253f43cb188b2ec2138148b6a9e1134c 2091 Gene3D G3DSA:3.40.50.300 982 1078 2.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 16 416 2.9E-174 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 SUPERFAMILY SSF142984 241 324 3.79E-24 T 23-04-2016 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 PANTHER PTHR11780 15 422 1.0E-194 T 23-04-2016 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 SUPERFAMILY SSF142019 14 239 9.81E-78 T 23-04-2016 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 1.0E-24 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 219 9.8E-45 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 SUPERFAMILY SSF140490 326 423 1.31E-29 T 23-04-2016 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 PANTHER PTHR11780:SF10 15 422 1.0E-194 T 23-04-2016 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 SMART SM00928 329 374 6.1E-15 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NIAKO_RS14575 8ea785687286382d9240438a6d0c72d6 424 Pfam PF10531 SLBB domain 244 291 9.3E-14 T 23-04-2016 IPR019554 Soluble ligand binding domain NIAKO_RS19040 97809bbbe62c3b43ed39e55747187cd8 214 Gene3D G3DSA:3.40.470.10 21 110 3.3E-9 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS19040 97809bbbe62c3b43ed39e55747187cd8 214 SUPERFAMILY SSF52141 20 196 6.41E-10 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 2 146 32.865 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 Pfam PF00692 dUTPase 14 145 8.5E-31 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 PANTHER PTHR11241 15 147 5.0E-47 T 23-04-2016 NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 146 7.1E-53 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 SUPERFAMILY SSF51283 8 146 3.14E-50 T 23-04-2016 IPR029054 dUTPase-like NIAKO_RS34445 dc93751dc75f4ba33d7cfc0644e237e2 147 Gene3D G3DSA:2.70.40.10 3 146 1.7E-54 T 23-04-2016 IPR029054 dUTPase-like NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 Gene3D G3DSA:3.40.50.720 318 360 2.9E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 Gene3D G3DSA:3.40.50.720 1 80 2.9E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 Gene3D G3DSA:3.40.50.720 182 255 2.9E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 Pfam PF03275 UDP-galactopyranose mutase 147 343 1.2E-76 T 23-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 SUPERFAMILY SSF54373 246 310 5.3E-18 T 23-04-2016 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 PANTHER PTHR21197 1 379 9.5E-103 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 SUPERFAMILY SSF51971 1 264 3.65E-53 T 23-04-2016 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 SUPERFAMILY SSF51971 328 361 3.65E-53 T 23-04-2016 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 73 5.8E-16 T 23-04-2016 NIAKO_RS00080 92855bb4aa3e476e459394d67a84d4fc 380 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 1 359 7.6E-118 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 NIAKO_RS27485 bd070ec7173631bd8d945b2ab776ff7c 530 Pfam PF07394 Protein of unknown function (DUF1501) 48 388 1.7E-22 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 NIAKO_RS27485 bd070ec7173631bd8d945b2ab776ff7c 530 PANTHER PTHR15535:SF21 257 374 3.1E-12 T 23-04-2016 NIAKO_RS27485 bd070ec7173631bd8d945b2ab776ff7c 530 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 453 518 2.5E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS27485 bd070ec7173631bd8d945b2ab776ff7c 530 PANTHER PTHR15535 257 374 3.1E-12 T 23-04-2016 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 Pfam PF00534 Glycosyl transferases group 1 191 349 2.7E-40 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 PANTHER PTHR12526 1 374 3.6E-149 T 23-04-2016 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 PANTHER PTHR12526:SF336 1 374 3.6E-149 T 23-04-2016 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 Pfam PF13439 Glycosyltransferase Family 4 11 180 7.7E-26 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 SUPERFAMILY SSF53756 6 372 9.16E-83 T 23-04-2016 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 1 372 9.5E-168 T 23-04-2016 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 NIAKO_RS34465 e9c5b721c967085ee4cde4d34588b435 379 Gene3D G3DSA:3.40.50.2000 167 348 1.3E-28 T 23-04-2016 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 PANTHER PTHR30572:SF4 124 363 1.3E-83 T 23-04-2016 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 PANTHER PTHR30572:SF4 409 803 1.3E-83 T 23-04-2016 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 Pfam PF02687 FtsX-like permease family 297 402 4.3E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 Pfam PF02687 FtsX-like permease family 683 791 1.4E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 PANTHER PTHR30572 124 363 1.3E-83 T 23-04-2016 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 PANTHER PTHR30572 409 803 1.3E-83 T 23-04-2016 NIAKO_RS06555 3da2db0f8ade1605326d73d795f6c97f 803 Pfam PF12704 MacB-like periplasmic core domain 24 245 2.9E-21 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 Pfam PF01433 Peptidase family M1 38 397 1.7E-57 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 325 337 1.6E-16 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 194 209 1.6E-16 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 272 282 1.6E-16 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 306 321 1.6E-16 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 147 162 1.6E-16 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PANTHER PTHR11533 18 521 5.6E-82 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 SUPERFAMILY SSF63737 44 210 9.94E-24 T 23-04-2016 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 PANTHER PTHR11533:SF163 18 521 5.6E-82 T 23-04-2016 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 Gene3D G3DSA:1.10.390.10 319 466 9.6E-35 T 23-04-2016 NIAKO_RS01320 c371dbb7dff6a7ae8da77e1ae9859573 844 SUPERFAMILY SSF55486 236 463 1.59E-56 T 23-04-2016 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 174 3.5E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 Pfam PF08281 Sigma-70, region 4 123 173 1.9E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 PANTHER PTHR30173:SF20 12 174 3.9E-37 T 23-04-2016 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 178 1.7E-40 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 Gene3D G3DSA:1.10.1740.10 12 87 2.4E-15 T 23-04-2016 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 Gene3D G3DSA:1.10.10.10 117 178 2.4E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 Pfam PF04542 Sigma-70 region 2 23 89 2.5E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 SUPERFAMILY SSF88946 10 100 1.69E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 PANTHER PTHR30173 12 174 3.9E-37 T 23-04-2016 NIAKO_RS26060 4748508da840c7ce35b67d322fb66498 193 SUPERFAMILY SSF88659 100 177 2.62E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33265 75d86a47bd537d178fcd65dc85a1b1c9 206 Gene3D G3DSA:3.40.50.1000 84 202 2.0E-18 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS33265 75d86a47bd537d178fcd65dc85a1b1c9 206 Gene3D G3DSA:3.40.50.1000 4 17 2.0E-18 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS33265 75d86a47bd537d178fcd65dc85a1b1c9 206 SUPERFAMILY SSF56784 1 202 2.76E-26 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS33265 75d86a47bd537d178fcd65dc85a1b1c9 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 177 2.5E-18 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 SUPERFAMILY SSF49464 23 114 7.06E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 PANTHER PTHR32552 537 826 2.2E-116 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 PANTHER PTHR32552 103 490 2.2E-116 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Gene3D G3DSA:2.60.40.1120 23 107 9.3E-19 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Gene3D G3DSA:2.170.130.10 108 242 2.9E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 135 826 6.5E-83 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 PANTHER PTHR32552:SF10 537 826 2.2E-116 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 PANTHER PTHR32552:SF10 103 490 2.2E-116 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 SUPERFAMILY SSF56935 507 826 1.87E-119 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 SUPERFAMILY SSF56935 103 458 1.87E-119 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Gene3D G3DSA:2.40.170.20 246 461 2.6E-124 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Gene3D G3DSA:2.40.170.20 496 826 2.6E-124 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Pfam PF00593 TonB dependent receptor 585 825 6.2E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Pfam PF13715 CarboxypepD_reg-like domain 24 109 1.0E-17 T 23-04-2016 NIAKO_RS27625 beac148b420e0648d49ebcdde40c8d54 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 231 2.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27205 786fc14a275bad3518a4dc83937a88cd 231 Pfam PF13649 Methyltransferase domain 59 148 1.0E-9 T 23-04-2016 NIAKO_RS27205 786fc14a275bad3518a4dc83937a88cd 231 Gene3D G3DSA:3.40.50.150 46 216 8.7E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27205 786fc14a275bad3518a4dc83937a88cd 231 SUPERFAMILY SSF53335 32 223 1.16E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 SUPERFAMILY SSF53697 13 322 3.56E-65 T 23-04-2016 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 Gene3D G3DSA:3.40.50.10490 14 196 1.1E-43 T 23-04-2016 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 Pfam PF01380 SIS domain 43 173 1.2E-26 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 PIRSF PIRSF004692 1 325 7.5E-122 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 Pfam PF00571 CBS domain 214 258 2.6E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 Pfam PF00571 CBS domain 269 321 1.1E-7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 315 5.9E-99 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 Gene3D G3DSA:3.10.580.10 197 321 6.5E-32 T 23-04-2016 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 PANTHER PTHR38418:SF1 30 321 2.0E-35 T 23-04-2016 NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 SMART SM00116 211 259 1.7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 SMART SM00116 276 324 0.11 T 23-04-2016 IPR000644 CBS domain NIAKO_RS31530 9a1f60eb9096aa737962860a5a4cdfbd 325 PANTHER PTHR38418 30 321 2.0E-35 T 23-04-2016 NIAKO_RS16280 c8a92b8bffc7ab093f3fdc5dc54de5d9 249 Pfam PF12412 Protein of unknown function (DUF3667) 26 70 5.6E-13 T 23-04-2016 IPR022134 Protein of unknown function DUF3667 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 SMART SM00228 406 484 0.82 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 SMART SM00228 297 381 1.3E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Gene3D G3DSA:2.40.10.10 61 179 2.0E-33 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Gene3D G3DSA:2.30.42.10 299 396 1.4E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Gene3D G3DSA:2.40.10.10 182 298 1.3E-41 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Gene3D G3DSA:2.30.42.10 407 477 2.1E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 SUPERFAMILY SSF50494 59 289 1.15E-61 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PANTHER PTHR22939 60 83 2.9E-110 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PANTHER PTHR22939 101 391 2.9E-110 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Pfam PF13180 PDZ domain 315 390 1.5E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 SUPERFAMILY SSF50156 408 484 9.2E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 Pfam PF13365 Trypsin-like peptidase domain 119 258 4.9E-34 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 2.9E-48 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PANTHER PTHR22939:SF79 60 83 2.9E-110 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 PANTHER PTHR22939:SF79 101 391 2.9E-110 T 23-04-2016 NIAKO_RS01555 b746ae2e5cd9b68bcfd5ec5ba20bc033 500 SUPERFAMILY SSF50156 278 390 3.81E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 Gene3D G3DSA:1.50.10.10 77 297 1.9E-25 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 Pfam PF03663 Glycosyl hydrolase family 76 45 345 9.8E-40 T 23-04-2016 IPR005198 Glycoside hydrolase, family 76 KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 PIRSF PIRSF021505 1 382 6.3E-76 T 23-04-2016 IPR014512 Predicted O-glycosyl hydrolase NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 PANTHER PTHR12145 45 343 2.4E-34 T 23-04-2016 NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 PANTHER PTHR12145:SF14 45 343 2.4E-34 T 23-04-2016 NIAKO_RS15930 802462b0736f1e5fa3c5903f5abcebfb 383 SUPERFAMILY SSF48208 53 342 4.82E-37 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26085 ce3ea1090fd30f48bf25ed4624fc7811 244 PANTHER PTHR31321 137 228 3.1E-23 T 23-04-2016 NIAKO_RS26085 ce3ea1090fd30f48bf25ed4624fc7811 244 PANTHER PTHR31321:SF29 137 228 3.1E-23 T 23-04-2016 NIAKO_RS26085 ce3ea1090fd30f48bf25ed4624fc7811 244 SUPERFAMILY SSF52266 20 235 9.16E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS26085 ce3ea1090fd30f48bf25ed4624fc7811 244 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 221 6.9E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS26085 ce3ea1090fd30f48bf25ed4624fc7811 244 Gene3D G3DSA:3.40.50.1110 24 243 3.2E-73 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS27930 6ad2472244b334e8389361fbc1e06c2f 112 Pfam PF12305 Protein of unknown function (DUF3630) 21 71 9.7E-7 T 23-04-2016 IPR022080 Protein of unknown function DUF3630 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Gene3D G3DSA:2.40.170.20 343 369 1.9E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Gene3D G3DSA:2.40.170.20 424 941 1.9E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Gene3D G3DSA:2.40.170.20 995 1082 1.9E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Gene3D G3DSA:2.60.40.1120 111 176 3.2E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF56935 415 503 1.65E-61 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF56935 907 951 1.65E-61 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF56935 531 865 1.65E-61 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF56935 1001 1081 1.65E-61 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF56935 217 363 1.65E-61 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 315 345 1.4E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Gene3D G3DSA:2.170.130.10 228 342 7.3E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 SUPERFAMILY SSF49464 112 196 5.23E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532 544 1081 4.2E-104 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532 306 525 4.2E-104 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532 109 280 4.2E-104 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 111 1083 7.2E-153 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 Pfam PF07715 TonB-dependent Receptor Plug Domain 218 339 1.3E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532:SF57 544 1081 4.2E-104 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532:SF57 306 525 4.2E-104 T 23-04-2016 NIAKO_RS13410 0bfef38912e3f1656d9831646b3ea692 1083 PANTHER PTHR11532:SF57 109 280 4.2E-104 T 23-04-2016 NIAKO_RS07975 d283dfb3b7582fcf4221a84da8fc082f 886 Gene3D G3DSA:2.60.40.1120 43 117 4.5E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07975 d283dfb3b7582fcf4221a84da8fc082f 886 Gene3D G3DSA:2.40.170.20 260 857 5.3E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07975 d283dfb3b7582fcf4221a84da8fc082f 886 SUPERFAMILY SSF56935 155 857 1.72E-66 T 23-04-2016 NIAKO_RS07975 d283dfb3b7582fcf4221a84da8fc082f 886 Gene3D G3DSA:2.170.130.10 146 259 3.7E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07975 d283dfb3b7582fcf4221a84da8fc082f 886 Pfam PF14905 Outer membrane protein beta-barrel family 410 855 1.8E-94 T 23-04-2016 NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 Gene3D G3DSA:3.40.50.1100 123 303 4.0E-41 T 23-04-2016 NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 SUPERFAMILY SSF53686 3 307 2.62E-66 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 Gene3D G3DSA:3.40.50.1100 31 119 9.8E-24 T 23-04-2016 NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 274 1.3E-47 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 PANTHER PTHR10314 23 304 2.3E-66 T 23-04-2016 NIAKO_RS11545 0a49da5b6c18d359e7d2ca39f3e0d85a 310 PANTHER PTHR10314:SF109 23 304 2.3E-66 T 23-04-2016 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Pfam PF02954 Bacterial regulatory protein, Fis family 534 577 3.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 PANTHER PTHR32071 201 585 2.9E-154 T 23-04-2016 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 354 369 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 SMART SM00382 288 432 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 SUPERFAMILY SSF46689 481 579 6.81E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 292 305 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Gene3D G3DSA:3.30.450.40 58 239 2.1E-13 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 SUPERFAMILY SSF55781 58 233 4.8E-13 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Gene3D G3DSA:1.10.10.60 523 579 3.9E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Pfam PF00158 Sigma-54 interaction domain 268 434 1.3E-71 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Gene3D G3DSA:1.10.8.60 441 512 4.3E-24 T 23-04-2016 NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 481 490 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 Gene3D G3DSA:3.40.50.300 265 440 8.2E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08560 08be06dba2b6ed5268a3b2e39faee1e1 585 SUPERFAMILY SSF52540 267 509 9.0E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 PANTHER PTHR16301 4 187 5.6E-50 T 23-04-2016 IPR023582 Impact family NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 23-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 Pfam PF01205 Uncharacterized protein family UPF0029 21 126 1.1E-29 T 23-04-2016 IPR001498 Impact, N-terminal NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 8 199 2.3E-51 T 23-04-2016 IPR015796 Impact family, bacterial/archaeal NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 Gene3D G3DSA:3.30.70.240 139 191 3.1E-5 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 Gene3D G3DSA:3.30.230.30 8 133 2.1E-44 T 23-04-2016 IPR001498 Impact, N-terminal NIAKO_RS22395 8335ce5f2472e9f0bd21d2a95d2709af 203 SUPERFAMILY SSF54211 6 132 6.45E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS00300 d5334d5878b2d5f38dc314bef004066d 276 SUPERFAMILY SSF52518 4 268 1.74E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00300 d5334d5878b2d5f38dc314bef004066d 276 PANTHER PTHR11624 2 271 2.5E-87 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS00300 d5334d5878b2d5f38dc314bef004066d 276 PANTHER PTHR11624:SF86 2 271 2.5E-87 T 23-04-2016 NIAKO_RS00300 d5334d5878b2d5f38dc314bef004066d 276 Gene3D G3DSA:3.40.50.970 2 271 8.9E-89 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00300 d5334d5878b2d5f38dc314bef004066d 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 20 259 1.5E-42 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Pfam PF12708 Pectate lyase superfamily protein 49 111 4.3E-14 T 23-04-2016 IPR024535 Pectate lyase superfamily protein NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Pfam PF12708 Pectate lyase superfamily protein 477 543 1.2E-8 T 23-04-2016 IPR024535 Pectate lyase superfamily protein NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SUPERFAMILY SSF49785 881 1006 2.91E-26 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.160.20.10 22 199 3.2E-22 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.160.20.10 477 661 2.5E-16 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.160.20.10 252 438 3.2E-22 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.160.20.10 754 864 2.5E-16 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.60.120.260 881 1007 1.5E-27 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Pfam PF00754 F5/8 type C domain 887 1002 7.7E-18 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SUPERFAMILY SSF49785 1015 1161 4.42E-30 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SUPERFAMILY SSF51126 472 829 3.54E-15 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SUPERFAMILY SSF51126 18 213 5.89E-18 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SUPERFAMILY SSF51126 252 407 5.89E-18 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Gene3D G3DSA:2.60.120.260 1018 1161 1.9E-39 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 SMART SM00606 1015 1161 1.5E-21 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1179 1258 1.9E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS08230 380d90a4c1114fb01cb5ebf629575703 1259 Pfam PF03422 Carbohydrate binding module (family 6) 1048 1160 1.1E-21 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 Gene3D G3DSA:3.40.50.720 39 193 3.3E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 PANTHER PTHR22604:SF107 39 330 7.8E-101 T 23-04-2016 NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 39 166 4.5E-9 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 SUPERFAMILY SSF51735 38 212 6.41E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 Gene3D G3DSA:3.30.360.10 213 331 3.7E-4 T 23-04-2016 NIAKO_RS18610 9325e3a4c1782bb98ef44319568e4ecd 333 PANTHER PTHR22604 39 330 7.8E-101 T 23-04-2016 NIAKO_RS00155 4eb4dfd5849817849ade751836ceb3fe 128 Gene3D G3DSA:3.40.50.2300 1 124 3.1E-26 T 23-04-2016 NIAKO_RS00155 4eb4dfd5849817849ade751836ceb3fe 128 SUPERFAMILY SSF52172 1 124 1.85E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS00155 4eb4dfd5849817849ade751836ceb3fe 128 SMART SM00448 1 119 1.2E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00155 4eb4dfd5849817849ade751836ceb3fe 128 Pfam PF00072 Response regulator receiver domain 3 116 6.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00155 4eb4dfd5849817849ade751836ceb3fe 128 PANTHER PTHR26402 1 115 4.9E-21 T 23-04-2016 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 Gene3D G3DSA:3.40.810.20 8 213 6.6E-88 T 23-04-2016 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 PANTHER PTHR13707 8 217 3.8E-121 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 Pfam PF01144 Coenzyme A transferase 8 201 3.8E-41 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 SMART SM00882 6 203 8.9E-73 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 SUPERFAMILY SSF100950 8 218 2.15E-73 T 23-04-2016 NIAKO_RS25085 d3a8fa8d7e1b0f81d00aec7a660325c7 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 6 209 7.0E-96 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SUPERFAMILY SSF55874 496 622 4.06E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Gene3D G3DSA:3.30.450.20 139 255 1.3E-9 T 23-04-2016 NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Gene3D G3DSA:3.30.450.20 267 396 4.2E-15 T 23-04-2016 NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SUPERFAMILY SSF55785 138 254 7.8E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Gene3D G3DSA:3.30.565.10 529 623 7.7E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Gene3D G3DSA:3.30.565.10 470 490 7.7E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SMART SM00091 151 222 4.2 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SMART SM00091 282 351 0.0097 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 PANTHER PTHR24421 402 623 3.3E-48 T 23-04-2016 NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SMART SM00387 531 625 7.8E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Pfam PF07730 Histidine kinase 426 492 2.3E-15 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 622 9.2E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 Pfam PF13188 PAS domain 283 325 0.021 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 279 405 1.7E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 SUPERFAMILY SSF55785 267 396 6.85E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS08875 7a823ab01173175f035d68b845d92d85 633 PANTHER PTHR24421:SF1 402 623 3.3E-48 T 23-04-2016 NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 Gene3D G3DSA:3.40.50.1000 12 182 9.1E-39 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 11 153 6.4E-29 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 Pfam PF13242 HAD-hyrolase-like 109 158 9.3E-8 T 23-04-2016 NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 11 156 2.6E-25 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 PIRSF PIRSF004682 6 185 1.4E-43 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 SUPERFAMILY SSF56784 12 182 1.03E-30 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 PANTHER PTHR23133:SF3 11 184 4.5E-35 T 23-04-2016 NIAKO_RS12575 69547c9e97cfe61c401c370a542a98f9 185 PANTHER PTHR23133 11 184 4.5E-35 T 23-04-2016 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PANTHER PTHR12128 8 313 1.1E-106 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PIRSF PIRSF001365 3 309 4.5E-70 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 SUPERFAMILY SSF51569 2 299 7.85E-75 T 23-04-2016 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 136 153 3.1E-13 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 3.1E-13 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 3.1E-13 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 Gene3D G3DSA:3.20.20.70 2 300 2.0E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 SMART SM01130 7 299 1.3E-70 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 PANTHER PTHR12128:SF30 8 313 1.1E-106 T 23-04-2016 NIAKO_RS02775 11573dd0d15ac28a796830199e887598 313 Pfam PF00701 Dihydrodipicolinate synthetase family 8 296 4.8E-55 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 PANTHER PTHR33375 1 302 7.6E-91 T 23-04-2016 NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 SUPERFAMILY SSF110849 37 139 3.66E-26 T 23-04-2016 IPR003115 ParB/Sulfiredoxin NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 Pfam PF02195 ParB-like nuclease domain 47 134 2.4E-23 T 23-04-2016 IPR003115 ParB/Sulfiredoxin NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 SMART SM00470 45 135 6.0E-28 T 23-04-2016 IPR003115 ParB/Sulfiredoxin NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 Gene3D G3DSA:1.10.260.40 139 180 2.1E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 214 8.7E-51 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 SUPERFAMILY SSF109709 127 236 9.29E-36 T 23-04-2016 NIAKO_RS05625 648d879fa1d733df335f0d0cdda22385 306 Gene3D G3DSA:3.90.1530.10 43 138 5.5E-36 T 23-04-2016 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Gene3D G3DSA:3.30.565.10 587 675 2.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Gene3D G3DSA:1.25.40.10 70 186 6.8E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Gene3D G3DSA:1.25.40.10 279 379 1.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 9.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 632 9.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 9.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 673 2.7E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Pfam PF13181 Tetratricopeptide repeat 266 291 0.0016 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Pfam PF13181 Tetratricopeptide repeat 93 126 0.017 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SUPERFAMILY SSF48452 70 167 2.28E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SUPERFAMILY SSF55874 557 671 1.44E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Gene3D G3DSA:1.25.40.10 218 278 1.2E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 Pfam PF07730 Histidine kinase 479 542 8.3E-12 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00028 223 256 87.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00028 306 339 97.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00028 134 167 170.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00028 93 126 66.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00028 264 297 0.0089 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SUPERFAMILY SSF48452 222 367 5.26E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 SMART SM00387 582 675 1.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 PANTHER PTHR24421 172 214 3.6E-36 T 23-04-2016 NIAKO_RS07345 03302233e7c2fa216e05921c718ccde7 683 PANTHER PTHR24421 474 671 3.6E-36 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.170.130.10 116 251 1.3E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF56935 874 918 9.89E-86 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF56935 337 425 9.89E-86 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF56935 963 1053 9.89E-86 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF56935 110 275 9.89E-86 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF56935 465 817 9.89E-86 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.40.170.20 460 829 1.9E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.40.170.20 252 271 1.9E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.40.170.20 346 422 1.9E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.40.170.20 883 1055 1.9E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1056 7.4E-184 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532 217 462 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532 24 196 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532 542 1054 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532:SF51 217 462 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532:SF51 24 196 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 PANTHER PTHR11532:SF51 542 1054 3.3E-196 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Pfam PF13715 CarboxypepD_reg-like domain 33 113 5.9E-14 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 226 256 4.7E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 SUPERFAMILY SSF49464 31 111 1.57E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Gene3D G3DSA:2.60.40.1120 32 115 2.7E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Pfam PF14905 Outer membrane protein beta-barrel family 719 812 3.0E-9 T 23-04-2016 NIAKO_RS13950 5874c391dda5c864c5f271ff0733fe05 1056 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 250 2.9E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Gene3D G3DSA:3.40.140.20 358 497 5.4E-44 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 SMART SM00798 136 439 1.6E-130 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 5 507 36.448 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 SMART SM00851 17 131 1.9E-39 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 PIRSF PIRSF000414 1 507 1.2E-177 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 SUPERFAMILY SSF52335 5 195 1.68E-55 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 438 1.2E-96 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 SUPERFAMILY SSF53927 209 507 2.91E-104 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 PANTHER PTHR11692:SF2 3 507 8.4E-228 T 23-04-2016 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Gene3D G3DSA:3.40.50.1380 3 189 3.4E-66 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Pfam PF02142 MGS-like domain 18 130 6.5E-20 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 PANTHER PTHR11692 3 507 8.4E-228 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS28480 c44d26963d6290ea96c92784e2a59a75 507 Gene3D G3DSA:3.40.140.20 232 352 7.0E-40 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 125 13.311 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 Pfam PF00825 Ribonuclease P 7 121 6.0E-17 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 Gene3D G3DSA:3.30.230.10 4 122 5.2E-22 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 SUPERFAMILY SSF54211 6 124 1.26E-13 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS32470 aa64259654d713804c6107ec0106eff6 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 42 82 5.0E-5 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 504 42.624 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PANTHER PTHR22594 2 505 3.1E-249 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 SUPERFAMILY SSF55681 164 502 5.55E-117 T 23-04-2016 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 Pfam PF01336 OB-fold nucleic acid binding domain 58 140 2.3E-14 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PANTHER PTHR22594:SF4 2 505 3.1E-249 T 23-04-2016 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 Gene3D G3DSA:3.30.930.10 163 501 2.1E-118 T 23-04-2016 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 Gene3D G3DSA:2.40.50.140 7 149 3.9E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 1.1E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 1.1E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 1.1E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 1.1E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 505 3.2E-188 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 SUPERFAMILY SSF50249 5 149 4.07E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS32270 1995aa877314d9c018945cbd99465770 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 501 3.6E-80 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS08495 0e5dd940c491f0b93754dc7cdb051dd5 300 Pfam PF12833 Helix-turn-helix domain 223 300 1.9E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08495 0e5dd940c491f0b93754dc7cdb051dd5 300 SUPERFAMILY SSF46689 255 300 1.7E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08495 0e5dd940c491f0b93754dc7cdb051dd5 300 PANTHER PTHR11019 217 300 1.7E-15 T 23-04-2016 NIAKO_RS08495 0e5dd940c491f0b93754dc7cdb051dd5 300 Gene3D G3DSA:1.10.10.60 255 300 1.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08495 0e5dd940c491f0b93754dc7cdb051dd5 300 SMART SM00342 215 299 2.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Pfam PF04545 Sigma-70, region 4 225 275 2.1E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Gene3D G3DSA:1.10.10.10 127 176 4.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PIRSF PIRSF000770 7 282 9.6E-41 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Pfam PF04542 Sigma-70 region 2 56 123 5.4E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 SUPERFAMILY SSF88946 14 123 2.2E-40 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 276 1.2E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PANTHER PTHR30603 13 287 5.1E-94 T 23-04-2016 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 SUPERFAMILY SSF88659 127 198 8.72E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Pfam PF00140 Sigma-70 factor, region 1.2 17 49 4.0E-10 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Gene3D G3DSA:1.10.10.10 218 287 1.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Pfam PF04539 Sigma-70 region 3 135 205 1.7E-18 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PANTHER PTHR30603:SF0 13 287 5.1E-94 T 23-04-2016 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 Gene3D G3DSA:1.10.601.10 13 123 5.2E-48 T 23-04-2016 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PRINTS PR00046 Major sigma-70 factor signature 263 274 1.2E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PRINTS PR00046 Major sigma-70 factor signature 102 110 1.2E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PRINTS PR00046 Major sigma-70 factor signature 227 239 1.2E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.2E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 PRINTS PR00046 Major sigma-70 factor signature 248 263 1.2E-22 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34625 e8f57b297e70ff228ae26f53b32911cf 289 SUPERFAMILY SSF88659 185 286 9.59E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 Gene3D G3DSA:1.10.260.40 7 58 6.0E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 Pfam PF13377 Periplasmic binding protein-like domain 176 338 7.5E-31 T 23-04-2016 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 SUPERFAMILY SSF47413 6 64 3.13E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.5E-13 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 PANTHER PTHR30146 6 339 6.7E-109 T 23-04-2016 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 SMART SM00354 6 76 3.5E-24 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 Gene3D G3DSA:3.40.50.2300 59 178 4.3E-43 T 23-04-2016 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 Gene3D G3DSA:3.40.50.2300 179 316 4.6E-50 T 23-04-2016 NIAKO_RS03670 2d08fdcfdcad505f1de5fd2db50f0d74 346 SUPERFAMILY SSF53822 66 338 8.14E-73 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 PANTHER PTHR23501 2 449 2.2E-88 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 Gene3D G3DSA:1.20.1250.20 8 185 8.5E-28 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 Gene3D G3DSA:1.20.1250.20 268 449 3.3E-14 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 1.2E-5 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 1.2E-5 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.2E-5 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 1.2E-5 T 23-04-2016 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 Pfam PF07690 Major Facilitator Superfamily 13 407 1.3E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 SUPERFAMILY SSF103473 2 194 3.27E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS33490 b98bfcfde15fd6e5da469553c1b7e5ef 454 SUPERFAMILY SSF103473 243 449 3.27E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS29445 b24198e247b54024acf2f065607378a4 149 Gene3D G3DSA:3.30.530.20 6 147 1.8E-7 T 23-04-2016 IPR023393 START-like domain NIAKO_RS29445 b24198e247b54024acf2f065607378a4 149 SUPERFAMILY SSF55961 9 144 2.03E-15 T 23-04-2016 NIAKO_RS29445 b24198e247b54024acf2f065607378a4 149 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 146 2.8E-12 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 PANTHER PTHR30572:SF4 290 356 1.1E-68 T 23-04-2016 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 PANTHER PTHR30572:SF4 401 795 1.1E-68 T 23-04-2016 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 PANTHER PTHR30572 290 356 1.1E-68 T 23-04-2016 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 PANTHER PTHR30572 401 795 1.1E-68 T 23-04-2016 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 Pfam PF02687 FtsX-like permease family 290 403 3.1E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 Pfam PF02687 FtsX-like permease family 675 784 6.6E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 Pfam PF12704 MacB-like periplasmic core domain 435 637 8.9E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS02870 763d98e9d5ca7547a6490f1b2894cda3 795 Pfam PF12704 MacB-like periplasmic core domain 20 239 2.5E-17 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 PANTHER PTHR30203 12 471 1.5E-97 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 469 2.3E-91 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Gene3D G3DSA:2.20.200.10 318 345 8.1E-9 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Gene3D G3DSA:2.20.200.10 100 145 8.1E-9 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 SUPERFAMILY SSF56954 4 470 9.42E-95 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 PANTHER PTHR30203:SF14 12 471 1.5E-97 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Pfam PF02321 Outer membrane efflux protein 285 467 5.8E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Pfam PF02321 Outer membrane efflux protein 63 258 6.0E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Gene3D G3DSA:1.20.1600.10 51 89 1.4E-95 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Gene3D G3DSA:1.20.1600.10 146 317 1.4E-95 T 23-04-2016 NIAKO_RS25150 70bc7d394df0a08ccc36c72749946212 471 Gene3D G3DSA:1.20.1600.10 356 470 1.4E-95 T 23-04-2016 NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Gene3D G3DSA:3.30.70.980 134 205 2.5E-20 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 PANTHER PTHR12532 1 240 3.4E-81 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Pfam PF01709 Transcriptional regulator 5 239 5.1E-76 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 SUPERFAMILY SSF75625 1 239 4.45E-75 T 23-04-2016 IPR029072 YebC-like NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Gene3D G3DSA:3.30.1270.10 214 240 3.1E-32 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Gene3D G3DSA:3.30.1270.10 80 133 3.1E-32 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Gene3D G3DSA:1.10.10.200 1 77 1.5E-24 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 240 27.53 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like NIAKO_RS01455 8c549db6c5f094ea09e0bf1082a6e360 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 4 239 8.3E-76 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 PANTHER PTHR12553:SF7 10 238 2.8E-56 T 23-04-2016 NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 Pfam PF12706 Beta-lactamase superfamily domain 31 208 2.4E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 SUPERFAMILY SSF56281 17 238 1.03E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 Gene3D G3DSA:3.60.15.10 2 238 4.7E-63 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 SMART SM00849 19 186 0.0076 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34290 7d2b12d6a006775420077490685340f3 238 PANTHER PTHR12553 10 238 2.8E-56 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Gene3D G3DSA:2.130.10.140 637 648 1.8E-13 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Gene3D G3DSA:2.130.10.140 214 427 1.1E-18 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Gene3D G3DSA:2.130.10.140 428 595 1.8E-13 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 SUPERFAMILY SSF110296 436 651 1.62E-17 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Gene3D G3DSA:2.130.10.140 29 205 3.6E-13 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 SUPERFAMILY SSF110296 33 280 1.31E-26 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 705 774 5.6E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 SUPERFAMILY SSF110296 208 448 6.8E-25 T 23-04-2016 NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Pfam PF14870 Photosynthesis system II assembly factor YCF48 439 525 3.0E-11 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Pfam PF14870 Photosynthesis system II assembly factor YCF48 27 113 6.7E-8 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Pfam PF14870 Photosynthesis system II assembly factor YCF48 152 236 1.1E-9 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS37155 a9268140c207eadee7351fc344ba49a4 774 Pfam PF14870 Photosynthesis system II assembly factor YCF48 325 391 1.7E-6 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 11 130 33.992 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 PIRSF PIRSF006614 7 150 1.6E-60 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 SUPERFAMILY SSF52335 3 146 1.57E-51 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 PANTHER PTHR30492 1 150 3.6E-75 T 23-04-2016 NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 Gene3D G3DSA:3.40.50.1380 5 149 4.7E-60 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 Pfam PF02142 MGS-like domain 25 115 4.5E-16 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 10 148 1.8E-53 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 ProSitePatterns PS01335 Methylglyoxal synthase active site. 64 72 - T 23-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NIAKO_RS30940 346116cdea0df34f5cd461379fe4ac98 150 SMART SM00851 24 117 1.1E-17 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain NIAKO_RS17300 c6b0581c935f997a1263767d18be0bf7 332 SUPERFAMILY SSF50969 48 254 6.02E-10 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS17300 c6b0581c935f997a1263767d18be0bf7 332 Gene3D G3DSA:2.130.10.10 47 255 3.3E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 Gene3D G3DSA:2.60.40.380 42 119 5.0E-7 T 23-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 38 103 7.5E-9 T 23-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 Gene3D G3DSA:3.60.21.10 123 457 1.5E-63 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 Pfam PF00149 Calcineurin-like phosphoesterase 128 344 2.9E-20 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 SUPERFAMILY SSF56300 392 454 1.76E-48 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 SUPERFAMILY SSF56300 124 352 1.76E-48 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 SUPERFAMILY SSF49363 36 119 2.22E-12 T 23-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 PANTHER PTHR22953 42 353 8.9E-51 T 23-04-2016 NIAKO_RS15220 4e5d65111f6fff6734e05f831670ea61 522 PANTHER PTHR22953 373 455 8.9E-51 T 23-04-2016 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Pfam PF01522 Polysaccharide deacetylase 606 737 3.2E-7 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 SUPERFAMILY SSF81296 16 115 4.69E-13 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Gene3D G3DSA:2.60.40.10 16 117 1.9E-19 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 SUPERFAMILY SSF48208 115 583 7.37E-69 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Pfam PF02927 Cellulase N-terminal ig-like domain 26 109 1.1E-18 T 23-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Pfam PF00759 Glycosyl hydrolase family 9 120 580 1.4E-66 T 23-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Gene3D G3DSA:1.50.10.10 118 582 2.8E-85 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 Gene3D G3DSA:3.20.20.370 596 826 5.0E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS32290 ae5489da8b8e1d2936cfdce52048e4c6 826 SUPERFAMILY SSF88713 598 825 8.58E-23 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 Pfam PF16344 Domain of unknown function (DUF4974) 314 410 5.6E-19 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 PANTHER PTHR30273:SF2 1 128 2.7E-69 T 23-04-2016 NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 PANTHER PTHR30273:SF2 193 414 2.7E-69 T 23-04-2016 NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 Pfam PF04773 FecR protein 192 292 3.3E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 PANTHER PTHR30273 1 128 2.7E-69 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS17220 fe4dce54c72078870db38da866f6b6e3 415 PANTHER PTHR30273 193 414 2.7E-69 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 SUPERFAMILY SSF74650 2101 2364 6.59E-79 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469 30 1238 0.0 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469 1258 1908 0.0 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469 1924 2895 0.0 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 SUPERFAMILY SSF74650 1602 1871 1.6E-80 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Pfam PF10091 Putative glucoamylase 1365 1557 4.5E-16 T 23-04-2016 IPR019282 Domain of unknown function DUF2329 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Gene3D G3DSA:2.70.98.40 1610 1902 4.2E-100 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Gene3D G3DSA:2.70.98.40 2101 2424 1.9E-82 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 SUPERFAMILY SSF48208 2371 2861 2.86E-87 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Gene3D G3DSA:2.60.420.10 2812 2864 4.2E-7 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2395 2821 3.7E-120 T 23-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Pfam PF06165 Glycosyltransferase family 36 1622 1868 4.5E-82 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 Pfam PF06165 Glycosyltransferase family 36 2124 2364 5.2E-74 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 SMART SM01068 1602 1659 1.4E-21 T 23-04-2016 IPR009342 Putative carbohydrate binding domain NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 SMART SM01068 2101 2166 5.9E-30 T 23-04-2016 IPR009342 Putative carbohydrate binding domain NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469:SF2 30 1238 0.0 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469:SF2 1258 1908 0.0 T 23-04-2016 NIAKO_RS34875 3827caa085c94c16a391cbd3ded93fd6 2895 PANTHER PTHR37469:SF2 1924 2895 0.0 T 23-04-2016 NIAKO_RS14465 354ad2ae5ce776bb30ffb02a9440f955 2678 SUPERFAMILY SSF56988 650 807 1.07E-29 T 23-04-2016 NIAKO_RS14465 354ad2ae5ce776bb30ffb02a9440f955 2678 Gene3D G3DSA:3.90.182.10 641 836 1.7E-30 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS14465 354ad2ae5ce776bb30ffb02a9440f955 2678 SMART SM00758 647 803 8.4E-20 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS14465 354ad2ae5ce776bb30ffb02a9440f955 2678 Pfam PF07691 PA14 domain 698 793 1.0E-22 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 PANTHER PTHR12220 1 137 5.1E-69 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 7.5E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 7.5E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 7.5E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 7.5E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.1E-48 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 SUPERFAMILY SSF54686 1 137 4.32E-55 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 9.3E-57 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 Gene3D G3DSA:3.90.1170.10 23 136 2.5E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22965 52127a147f9d5706182e073b08b47d82 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.346 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 SUPERFAMILY SSF53756 1 327 1.48E-69 T 23-04-2016 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 68 295 2.5E-28 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 Gene3D G3DSA:3.40.50.2000 166 327 1.1E-32 T 23-04-2016 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 PANTHER PTHR30160 1 329 1.2E-53 T 23-04-2016 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 Gene3D G3DSA:3.40.50.2000 1 143 7.4E-33 T 23-04-2016 NIAKO_RS09785 f05b669ee4201eb8a39f890ccdcd62af 329 PANTHER PTHR30160:SF1 1 329 1.2E-53 T 23-04-2016 NIAKO_RS08595 58384f2d685a347a77a8c379b84a39c2 322 Pfam PF16398 Domain of unknown function (DUF5007) 54 157 5.9E-6 T 23-04-2016 IPR032173 Protein of unknown function DUF5007 NIAKO_RS37465 daba6a8b4b4dc2f53400f8f55f3d0436 184 SUPERFAMILY SSF54427 47 181 1.28E-27 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS37465 daba6a8b4b4dc2f53400f8f55f3d0436 184 Gene3D G3DSA:3.10.450.50 47 182 6.5E-29 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS37465 daba6a8b4b4dc2f53400f8f55f3d0436 184 PANTHER PTHR38436 47 179 5.7E-14 T 23-04-2016 NIAKO_RS37465 daba6a8b4b4dc2f53400f8f55f3d0436 184 Pfam PF07366 SnoaL-like polyketide cyclase 54 176 6.3E-22 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 76 87 - T 23-04-2016 IPR018215 ClpP, Ser active site NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 Pfam PF00574 Clp protease 8 178 2.9E-63 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 SUPERFAMILY SSF52096 6 176 1.12E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 181 32.807 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 98 111 - T 23-04-2016 IPR033135 ClpP, histidine active site NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 PRINTS PR00127 Clp protease catalytic subunit P signature 76 93 8.1E-37 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 PRINTS PR00127 Clp protease catalytic subunit P signature 156 175 8.1E-37 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 PRINTS PR00127 Clp protease catalytic subunit P signature 97 116 8.1E-37 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 PRINTS PR00127 Clp protease catalytic subunit P signature 45 65 8.1E-37 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 Gene3D G3DSA:3.90.226.10 8 179 1.0E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS34325 587231dedc80d34033989650a11ce597 181 PANTHER PTHR10381 11 176 1.6E-77 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 PANTHER PTHR10788 3 736 2.8E-266 T 23-04-2016 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 PANTHER PTHR10788:SF6 3 736 2.8E-266 T 23-04-2016 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 SUPERFAMILY SSF53756 2 471 1.73E-146 T 23-04-2016 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Gene3D G3DSA:3.40.50.2000 256 452 2.1E-78 T 23-04-2016 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Gene3D G3DSA:3.40.50.1000 656 734 7.6E-41 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Gene3D G3DSA:3.40.50.1000 501 576 7.6E-41 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Pfam PF02358 Trehalose-phosphatase 504 711 1.6E-49 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 503 701 3.2E-20 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 SUPERFAMILY SSF56784 501 732 4.48E-40 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 500 732 6.8E-43 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Pfam PF00982 Glycosyltransferase family 20 3 469 1.9E-151 T 23-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 NIAKO_RS10830 5fcca12108f7640de44bbfad3e69dd12 753 Gene3D G3DSA:3.40.50.2000 2 255 2.4E-81 T 23-04-2016 NIAKO_RS09085 b8f2bdeafa46b3cec309960fc0422ecb 391 PANTHER PTHR12145:SF14 63 391 1.6E-28 T 23-04-2016 NIAKO_RS09085 b8f2bdeafa46b3cec309960fc0422ecb 391 SUPERFAMILY SSF48208 76 368 4.68E-26 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS09085 b8f2bdeafa46b3cec309960fc0422ecb 391 Gene3D G3DSA:1.50.10.10 84 243 2.8E-13 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS09085 b8f2bdeafa46b3cec309960fc0422ecb 391 PANTHER PTHR12145 63 391 1.6E-28 T 23-04-2016 NIAKO_RS09085 b8f2bdeafa46b3cec309960fc0422ecb 391 Pfam PF03663 Glycosyl hydrolase family 76 91 385 1.2E-31 T 23-04-2016 IPR005198 Glycoside hydrolase, family 76 KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 PANTHER PTHR33307:SF5 1 912 4.8E-292 T 23-04-2016 NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 Gene3D G3DSA:2.60.120.260 336 432 4.5E-17 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 PANTHER PTHR33307 1 912 4.8E-292 T 23-04-2016 NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 Pfam PF05592 Bacterial alpha-L-rhamnosidase 344 862 2.5E-179 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 SUPERFAMILY SSF50939 915 1233 1.65E-58 T 23-04-2016 IPR011040 Sialidases NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 Pfam PF13088 BNR repeat-like domain 941 1214 4.6E-98 T 23-04-2016 IPR011040 Sialidases NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 167 336 4.9E-62 T 23-04-2016 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 SUPERFAMILY SSF48208 447 863 4.35E-45 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17725 b7e16b923daa4fd4be74fdc402feadc5 1252 Gene3D G3DSA:2.120.10.10 917 1234 5.7E-77 T 23-04-2016 IPR011040 Sialidases NIAKO_RS23245 ce65ee85d7f2ee986fe807152eb0ae66 470 PANTHER PTHR30576 7 470 2.0E-96 T 23-04-2016 NIAKO_RS23245 ce65ee85d7f2ee986fe807152eb0ae66 470 Pfam PF13727 CoA-binding domain 69 247 5.8E-9 T 23-04-2016 NIAKO_RS23245 ce65ee85d7f2ee986fe807152eb0ae66 470 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 18 469 3.8E-111 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NIAKO_RS23245 ce65ee85d7f2ee986fe807152eb0ae66 470 Pfam PF02397 Bacterial sugar transferase 283 465 8.7E-55 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604 1 208 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604 226 309 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604 338 455 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 SUPERFAMILY SSF51735 47 206 4.84E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604:SF122 1 208 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604:SF122 226 309 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 PANTHER PTHR22604:SF122 338 455 9.1E-70 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 SUPERFAMILY SSF55347 183 208 2.09E-17 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 SUPERFAMILY SSF55347 248 354 2.09E-17 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 54 173 1.8E-22 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 Gene3D G3DSA:3.30.360.10 195 214 2.3E-23 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 Gene3D G3DSA:3.30.360.10 393 447 2.3E-23 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 Gene3D G3DSA:3.30.360.10 247 347 2.3E-23 T 23-04-2016 NIAKO_RS18605 20f41f3d6bd29be20b1fd3aa6aeed7b0 455 Gene3D G3DSA:3.40.50.720 49 194 5.2E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 PANTHER PTHR22916 1 146 3.3E-31 T 23-04-2016 NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 PANTHER PTHR22916 173 195 3.3E-31 T 23-04-2016 NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 Gene3D G3DSA:3.90.550.10 1 195 9.0E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 SUPERFAMILY SSF53448 2 151 8.44E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 SUPERFAMILY SSF53448 179 195 8.44E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37375 f2e3279db590c0a6a5e299efd0a70144 230 Pfam PF00535 Glycosyl transferase family 2 4 195 2.4E-26 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS09450 80ccda906a15bc445860d32b6572ebe1 291 SUPERFAMILY SSF49299 45 124 8.11E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09450 80ccda906a15bc445860d32b6572ebe1 291 Gene3D G3DSA:2.60.40.670 44 124 3.0E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 Gene3D G3DSA:3.30.565.10 483 576 1.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 Pfam PF06580 Histidine kinase 417 494 4.7E-12 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 SUPERFAMILY SSF55874 471 564 8.28E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 SUPERFAMILY SSF48452 196 339 2.98E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 PANTHER PTHR34220 382 620 6.3E-22 T 23-04-2016 NIAKO_RS23425 0993cc2d0045ac64473a46c3d576d9fd 622 Gene3D G3DSA:1.25.40.10 72 337 1.4E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 Gene3D G3DSA:1.10.1040.10 167 284 3.6E-21 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 SUPERFAMILY SSF51735 1 155 5.65E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 270 3.9E-12 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 SUPERFAMILY SSF48179 167 284 1.36E-19 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 PANTHER PTHR22981:SF62 1 285 2.2E-87 T 23-04-2016 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 2.5E-33 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 Gene3D G3DSA:3.40.50.720 1 163 2.9E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 PANTHER PTHR22981 1 285 2.2E-87 T 23-04-2016 NIAKO_RS36080 3799d0d60e309645c0a97fd0217c74b9 289 PIRSF PIRSF000103 1 287 4.0E-58 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SUPERFAMILY SSF49452 1 83 4.66E-16 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SMART SM01065 132 227 1.2E-7 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SMART SM01065 1 94 3.7E-8 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Gene3D G3DSA:2.60.40.10 1 98 2.9E-17 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Gene3D G3DSA:2.60.40.10 134 221 2.9E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Pfam PF00686 Starch binding domain 136 216 3.1E-9 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Pfam PF00686 Starch binding domain 2 79 2.0E-10 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SUPERFAMILY SSF51445 707 883 6.32E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SUPERFAMILY SSF51445 239 561 6.32E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Gene3D G3DSA:3.20.20.80 709 895 1.9E-164 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Gene3D G3DSA:3.20.20.80 238 563 1.9E-164 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 PANTHER PTHR32518 1 895 0.0 T 23-04-2016 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 PANTHER PTHR32518:SF3 1 895 0.0 T 23-04-2016 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 Pfam PF02446 4-alpha-glucanotransferase 246 872 2.9E-154 T 23-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS12630 eb1d7c4a7118b394450881d2f978e275 895 SUPERFAMILY SSF49452 133 228 5.4E-14 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 219 249 3.8E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532:SF51 19 193 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532:SF51 210 459 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532:SF51 570 1119 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Pfam PF13715 CarboxypepD_reg-like domain 29 110 1.5E-15 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Gene3D G3DSA:2.40.170.20 359 455 5.0E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Gene3D G3DSA:2.40.170.20 499 842 5.0E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1120 3.2E-177 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF56935 492 842 2.27E-73 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF56935 106 266 2.27E-73 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF56935 899 942 2.27E-73 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF56935 1027 1119 2.27E-73 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF56935 350 438 2.27E-73 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532 19 193 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532 210 459 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 PANTHER PTHR11532 570 1119 7.1E-148 T 23-04-2016 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Gene3D G3DSA:2.170.130.10 112 247 6.6E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 243 3.8E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 SUPERFAMILY SSF49464 27 107 4.97E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35695 139699596a0668154d8ae3f7fbfdb9dd 1121 Gene3D G3DSA:2.60.40.1120 28 111 8.4E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 179 2.0E-43 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 PANTHER PTHR30173 1 186 9.0E-41 T 23-04-2016 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 Gene3D G3DSA:1.10.1740.10 8 115 5.8E-24 T 23-04-2016 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 PANTHER PTHR30173:SF20 1 186 9.0E-41 T 23-04-2016 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 Pfam PF08281 Sigma-70, region 4 124 175 1.5E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 Gene3D G3DSA:1.10.10.10 117 180 3.0E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 SUPERFAMILY SSF88659 109 181 2.06E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 179 2.5E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 SUPERFAMILY SSF88946 4 99 1.67E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06830 069fb3716d923dcfe760fec9f923dbc6 197 Pfam PF04542 Sigma-70 region 2 27 94 1.2E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 Gene3D G3DSA:3.40.50.150 6 212 2.5E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 PANTHER PTHR18895:SF73 9 208 1.4E-49 T 23-04-2016 NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 91 97 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 PANTHER PTHR18895 9 208 1.4E-49 T 23-04-2016 NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 Pfam PF05175 Methyltransferase small domain 20 117 1.7E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NIAKO_RS14900 0973107659679159ffb64e6d37505f72 218 SUPERFAMILY SSF53335 17 165 1.57E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 4.6E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 118 4.6E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 37 54 4.6E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 4.6E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 Pfam PF00106 short chain dehydrogenase 36 232 1.5E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 Gene3D G3DSA:3.40.50.720 31 274 2.1E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 PANTHER PTHR24320 16 325 1.6E-92 T 23-04-2016 NIAKO_RS20940 8381cb9df2ac7f99248d199f9f09f410 331 SUPERFAMILY SSF51735 33 289 2.47E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 SMART SM00490 288 373 1.2E-8 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 Pfam PF08494 DEAD/H associated 655 841 5.2E-51 T 23-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 SMART SM00487 19 230 1.4E-21 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 Gene3D G3DSA:3.40.50.300 266 402 4.1E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031 807 822 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031 246 414 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031 844 868 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031 22 213 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031 468 567 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 Pfam PF00270 DEAD/DEAH box helicase 26 201 9.6E-22 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PIRSF PIRSF037307 5 869 2.2E-151 T 23-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 Pfam PF00271 Helicase conserved C-terminal domain 270 369 1.3E-12 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 Gene3D G3DSA:3.40.50.300 17 202 4.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 SUPERFAMILY SSF52540 241 385 9.37E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 SUPERFAMILY SSF52540 32 203 9.37E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031:SF122 807 822 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031:SF122 246 414 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031:SF122 844 868 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031:SF122 22 213 4.6E-49 T 23-04-2016 NIAKO_RS24910 e822da6043565a7860da8d7acfde0cd0 871 PANTHER PTHR24031:SF122 468 567 4.6E-49 T 23-04-2016 NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 SUPERFAMILY SSF51735 7 254 1.67E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 2.7E-52 T 23-04-2016 NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PANTHER PTHR24322 161 193 3.7E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PANTHER PTHR24322 16 145 3.7E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PANTHER PTHR24322:SF418 161 193 3.7E-44 T 23-04-2016 NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PANTHER PTHR24322:SF418 16 145 3.7E-44 T 23-04-2016 NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS03535 c54eceb2c638376c06e6e58d03eaa2ff 256 Gene3D G3DSA:3.40.50.720 5 254 2.1E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29310 a5a12b1006de56f69a431884c68917c8 381 Pfam PF13308 YARHG domain 328 380 3.5E-13 T 23-04-2016 IPR025582 YARHG domain NIAKO_RS29310 a5a12b1006de56f69a431884c68917c8 381 SMART SM01324 304 380 2.0E-6 T 23-04-2016 IPR025582 YARHG domain NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 Gene3D G3DSA:2.60.40.1180 606 718 5.4E-22 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 SUPERFAMILY SSF51445 154 491 4.82E-134 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 SUPERFAMILY SSF51445 520 593 4.82E-134 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 23 717 0.0 T 23-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 Pfam PF00128 Alpha amylase, catalytic domain 209 319 9.0E-10 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 27 116 3.1E-20 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 SUPERFAMILY SSF81296 22 167 2.69E-49 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 Gene3D G3DSA:2.60.40.10 22 172 1.1E-56 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 PANTHER PTHR10357:SF74 616 718 0.0 T 23-04-2016 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 PANTHER PTHR10357:SF74 20 597 0.0 T 23-04-2016 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 PANTHER PTHR10357 616 718 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 PANTHER PTHR10357 20 597 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 SMART SM00642 179 586 7.3E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 Gene3D G3DSA:3.20.20.80 173 594 5.3E-123 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15340 226518d964a93934b5fa12f445f16edd 725 SUPERFAMILY SSF51011 607 717 3.45E-18 T 23-04-2016 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 Pfam PF04055 Radical SAM superfamily 150 329 3.4E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 Gene3D G3DSA:3.80.30.20 142 382 4.5E-64 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 SMART SM00729 144 371 1.5E-43 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 Pfam PF00919 Uncharacterized protein family UPF0004 7 101 1.3E-25 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 SUPERFAMILY SSF102114 140 372 3.92E-47 T 23-04-2016 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 426 3.9E-119 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 148 168 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 9 426 7.0E-127 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 PANTHER PTHR11918 2 426 7.2E-108 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS14395 67b10289f05409b585b21d1b41819e7a 429 PANTHER PTHR11918:SF45 2 426 7.2E-108 T 23-04-2016 NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 SUPERFAMILY SSF51735 1 245 1.78E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.6E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PANTHER PTHR24322:SF513 153 189 1.1E-40 T 23-04-2016 NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PANTHER PTHR24322:SF513 10 137 1.1E-40 T 23-04-2016 NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 Gene3D G3DSA:3.40.50.720 2 229 5.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 Pfam PF00106 short chain dehydrogenase 7 193 7.9E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PANTHER PTHR24322 153 189 1.1E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11155 ac37b5b06f7b41f4ffb0462b0d4b802d 261 PANTHER PTHR24322 10 137 1.1E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24510 0d8ae08c6983454dc2ce775a54b4f0e0 232 Pfam PF12866 Protein of unknown function (DUF3823) 10 230 5.6E-60 T 23-04-2016 IPR024278 Protein of unknown function DUF3823 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Pfam PF13087 AAA domain 803 908 5.6E-13 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Pfam PF13245 Part of AAA domain 322 406 2.9E-6 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887:SF350 300 355 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887:SF350 45 64 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887:SF350 382 424 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887:SF350 716 911 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887:SF350 603 693 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887 300 355 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887 45 64 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887 382 424 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887 716 911 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 PANTHER PTHR10887 603 693 6.9E-77 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Pfam PF13086 AAA domain 621 694 2.6E-8 T 23-04-2016 NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 850 912 1.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 SUPERFAMILY SSF52540 633 706 1.48E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 SUPERFAMILY SSF52540 298 348 1.48E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 SUPERFAMILY SSF52540 384 459 1.48E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 SUPERFAMILY SSF52540 744 914 1.48E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 284 349 7.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 654 709 7.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 385 421 7.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 744 772 7.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36325 40718075bfa525e46f61feb5e0bd9480 936 Gene3D G3DSA:3.40.50.300 487 488 7.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09795 809f1748121a7da3effd0e645d733175 191 Gene3D G3DSA:3.10.290.30 1 143 7.9E-29 T 23-04-2016 IPR024047 Protein MM3350-like domain NIAKO_RS09795 809f1748121a7da3effd0e645d733175 191 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 12 134 1.2E-16 T 23-04-2016 IPR012912 Plasmid pRiA4b, Orf3 NIAKO_RS09795 809f1748121a7da3effd0e645d733175 191 SUPERFAMILY SSF159941 1 140 2.48E-30 T 23-04-2016 IPR024047 Protein MM3350-like domain NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 SUPERFAMILY SSF160467 11 111 2.09E-13 T 23-04-2016 NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 15 227 3.4E-56 T 23-04-2016 IPR010016 KipI family NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 PANTHER PTHR34698 5 238 3.0E-80 T 23-04-2016 NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 Gene3D G3DSA:2.40.100.10 106 238 1.1E-44 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 SMART SM00796 10 219 1.2E-70 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 SUPERFAMILY SSF50891 106 235 4.55E-39 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 PANTHER PTHR34698:SF2 5 238 3.0E-80 T 23-04-2016 NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 Pfam PF02682 Allophanate hydrolase subunit 1 11 216 9.5E-63 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D NIAKO_RS07940 891de5437b4f4e60fe3220bc80d9fd08 240 Gene3D G3DSA:3.30.1360.40 11 93 1.7E-14 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 Pfam PF00970 Oxidoreductase FAD-binding domain 9 105 1.6E-15 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PANTHER PTHR19370 5 251 2.2E-50 T 23-04-2016 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 151 1.7E-9 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 1.7E-9 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 1.7E-9 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 1.7E-9 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 Pfam PF00175 Oxidoreductase NAD-binding domain 117 235 7.8E-17 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 SUPERFAMILY SSF52343 105 253 1.44E-31 T 23-04-2016 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 Gene3D G3DSA:3.40.50.80 105 252 3.8E-32 T 23-04-2016 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 Gene3D G3DSA:2.40.30.10 5 104 6.7E-25 T 23-04-2016 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 100 109 1.9E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 35 47 1.9E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 1.9E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 NIAKO_RS27800 e5b827696afb776463f1920e72a61131 254 SUPERFAMILY SSF63380 3 108 7.58E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS16570 ef1ad5d93eff50edf3d11235db9c994f 136 PANTHER PTHR31757 1 136 3.9E-75 T 23-04-2016 NIAKO_RS16570 ef1ad5d93eff50edf3d11235db9c994f 136 Pfam PF07080 Protein of unknown function (DUF1348) 6 135 4.5E-67 T 23-04-2016 IPR009783 Protein of unknown function DUF1348 NIAKO_RS16570 ef1ad5d93eff50edf3d11235db9c994f 136 PANTHER PTHR31757:SF0 1 136 3.9E-75 T 23-04-2016 NIAKO_RS16570 ef1ad5d93eff50edf3d11235db9c994f 136 SUPERFAMILY SSF54427 2 135 1.76E-69 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS16570 ef1ad5d93eff50edf3d11235db9c994f 136 Gene3D G3DSA:3.10.450.50 12 135 2.0E-64 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS30850 f704cee42a246d4f5c74a7d2e34a3c6f 175 Gene3D G3DSA:3.30.70.1290 10 111 6.5E-8 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS30850 f704cee42a246d4f5c74a7d2e34a3c6f 175 SUPERFAMILY SSF143422 10 132 1.83E-9 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 SUPERFAMILY SSF51735 3 142 2.63E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 Gene3D G3DSA:3.40.50.720 2 175 5.6E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 PANTHER PTHR21708 1 287 1.7E-45 T 23-04-2016 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 SUPERFAMILY SSF48179 167 287 2.45E-21 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 287 3.2E-23 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 289 2.5E-58 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 146 4.8E-29 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NIAKO_RS20920 4801301e0d406933a5f3c6c343f6cfb5 291 Gene3D G3DSA:1.10.1040.10 176 288 2.7E-23 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.9E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SMART SM01096 421 545 1.6E-53 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.30.470.20 199 398 3.9E-69 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.30.470.20 746 921 4.2E-57 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.30.1490.20 686 745 3.3E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.30.1490.20 142 198 9.3E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.40.50.20 4 107 1.9E-41 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SUPERFAMILY SSF52440 557 674 2.01E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 871 2.4E-30 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.3E-65 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PANTHER PTHR11405:SF5 1 926 0.0 T 23-04-2016 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:3.40.50.20 536 662 8.0E-57 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 PANTHER PTHR11405 1 926 0.0 T 23-04-2016 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 545 7.5E-39 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SUPERFAMILY SSF48108 395 548 5.75E-43 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SMART SM01209 679 841 0.0049 T 23-04-2016 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SUPERFAMILY SSF56059 128 400 1.24E-100 T 23-04-2016 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 931 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SUPERFAMILY SSF56059 673 922 1.15E-87 T 23-04-2016 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 SUPERFAMILY SSF52440 1 127 7.91E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS28450 21c6a90add63321019e7370e0c2050b2 940 Gene3D G3DSA:1.10.1030.10 399 535 1.6E-44 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 PANTHER PTHR30469 42 330 5.7E-49 T 23-04-2016 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 PANTHER PTHR30469:SF4 42 330 5.7E-49 T 23-04-2016 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 SUPERFAMILY SSF111369 47 280 3.66E-23 T 23-04-2016 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 351 1.5E-54 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 276 1.4E-28 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 Gene3D G3DSA:2.40.50.100 59 92 3.2E-15 T 23-04-2016 NIAKO_RS19985 69f333311b3247fb38cf841cc3dc625d 361 Gene3D G3DSA:2.40.50.100 170 201 3.2E-15 T 23-04-2016 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 SUPERFAMILY SSF88659 126 180 3.05E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 179 7.9E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 Pfam PF04542 Sigma-70 region 2 29 95 2.0E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 Pfam PF08281 Sigma-70, region 4 125 172 3.4E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 Gene3D G3DSA:1.10.1740.10 8 110 1.5E-28 T 23-04-2016 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 PANTHER PTHR30173 1 182 2.5E-56 T 23-04-2016 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 SUPERFAMILY SSF88946 9 101 5.81E-25 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 PANTHER PTHR30173:SF21 1 182 2.5E-56 T 23-04-2016 NIAKO_RS23085 49573ce1f0588b5fa1896eff8ca0835e 192 Gene3D G3DSA:1.10.10.10 120 182 4.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 Gene3D G3DSA:2.30.33.40 8 93 5.8E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 PANTHER PTHR10772 9 93 3.0E-38 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 Pfam PF00166 Chaperonin 10 Kd subunit 6 92 2.0E-30 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 PRINTS PR00297 10kDa chaperonin signature 59 71 3.5E-29 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 PRINTS PR00297 10kDa chaperonin signature 29 50 3.5E-29 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 PRINTS PR00297 10kDa chaperonin signature 7 22 3.5E-29 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 PRINTS PR00297 10kDa chaperonin signature 80 93 3.5E-29 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 SMART SM00883 6 93 5.0E-48 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 SUPERFAMILY SSF50129 7 93 5.18E-30 T 23-04-2016 IPR011032 GroES-like NIAKO_RS14025 c839d117d8f630d1b4e91b9c535e35a9 93 Hamap MF_00580 10 kDa chaperonin [groS]. 6 93 21.316 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 SUPERFAMILY SSF50447 996 1096 5.61E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Gene3D G3DSA:3.40.50.300 581 752 2.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 510 1098 1.6E-236 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 6 1096 16.997 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 597 752 6.7E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Pfam PF11987 Translation-initiation factor 2 889 983 7.9E-36 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Gene3D G3DSA:2.40.30.10 764 857 5.8E-22 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Pfam PF00009 Elongation factor Tu GTP binding domain 595 753 1.1E-30 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 515 566 1.4E-13 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 SUPERFAMILY SSF52156 873 999 8.11E-35 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 PANTHER PTHR23115:SF184 577 921 1.9E-190 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 PANTHER PTHR23115:SF184 946 1094 1.9E-190 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Gene3D G3DSA:2.40.30.10 995 1097 1.5E-31 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 Gene3D G3DSA:3.40.50.10050 893 972 2.1E-23 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 PANTHER PTHR23115 577 921 1.9E-190 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 PANTHER PTHR23115 946 1094 1.9E-190 T 23-04-2016 NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 SUPERFAMILY SSF52540 582 764 2.76E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30020 c8391457113d13d75f380ccec16207fe 1098 SUPERFAMILY SSF50447 766 848 3.53E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS13025 d49a81e82a0cc1175251b7d8d53b3eff 323 PANTHER PTHR30106 19 323 1.8E-108 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 NIAKO_RS13025 d49a81e82a0cc1175251b7d8d53b3eff 323 PANTHER PTHR30106:SF1 19 323 1.8E-108 T 23-04-2016 NIAKO_RS13025 d49a81e82a0cc1175251b7d8d53b3eff 323 Pfam PF03601 Conserved hypothetical protein 698 39 303 1.8E-55 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 PIRSF PIRSF001227 29 805 3.5E-150 T 23-04-2016 IPR014395 Penicillin acylase GO:0016811 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 Gene3D G3DSA:1.10.439.10 61 218 9.6E-41 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 Gene3D G3DSA:2.30.120.10 358 410 1.7E-12 T 23-04-2016 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 PANTHER PTHR34218 61 806 3.9E-142 T 23-04-2016 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 Gene3D G3DSA:3.60.20.10 267 357 1.6E-83 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 Gene3D G3DSA:3.60.20.10 436 620 1.6E-83 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 SUPERFAMILY SSF56235 61 802 5.4E-176 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 PANTHER PTHR34218:SF2 61 806 3.9E-142 T 23-04-2016 NIAKO_RS11470 358ca65f3078d14c02c85810d6f4d060 806 Pfam PF01804 Penicillin amidase 66 790 1.7E-184 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 12 117 3.5E-29 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 Pfam PF05635 23S rRNA-intervening sequence protein 9 112 7.6E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 PANTHER PTHR38471 4 117 4.8E-24 T 23-04-2016 NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 SUPERFAMILY SSF158446 6 117 2.88E-30 T 23-04-2016 NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 Gene3D G3DSA:1.20.1440.60 6 117 1.8E-29 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS02815 3ff5bf48efea69c6a47d1537611836a7 119 PANTHER PTHR38471:SF2 4 117 4.8E-24 T 23-04-2016 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SUPERFAMILY SSF46894 490 548 1.53E-8 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SMART SM00028 149 182 1.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SMART SM00028 107 140 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SMART SM00028 307 340 110.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SMART SM00028 187 220 0.015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 PANTHER PTHR10098:SF126 11 258 2.8E-16 T 23-04-2016 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Pfam PF13424 Tetratricopeptide repeat 78 133 1.5E-7 T 23-04-2016 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Pfam PF13424 Tetratricopeptide repeat 187 251 2.4E-10 T 23-04-2016 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Gene3D G3DSA:1.25.40.10 292 336 2.6E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Gene3D G3DSA:1.25.40.10 205 260 2.6E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Gene3D G3DSA:1.10.10.10 492 548 1.6E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SMART SM00421 495 552 0.0061 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Pfam PF13181 Tetratricopeptide repeat 150 179 0.0045 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 PANTHER PTHR10098 11 258 2.8E-16 T 23-04-2016 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 Gene3D G3DSA:1.25.40.10 83 204 7.4E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13745 69561ffed49c9eed1d0239c37402a66b 555 SUPERFAMILY SSF48452 76 256 1.39E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01430 be6e40ed3b3669fe8d8b2b0ba435c8af 151 Pfam PF07610 Protein of unknown function (DUF1573) 58 101 6.4E-20 T 23-04-2016 IPR011467 Protein of unknown function DUF1573 NIAKO_RS01430 be6e40ed3b3669fe8d8b2b0ba435c8af 151 PANTHER PTHR37833:SF1 36 131 5.7E-20 T 23-04-2016 NIAKO_RS01430 be6e40ed3b3669fe8d8b2b0ba435c8af 151 Gene3D G3DSA:2.60.40.360 34 131 9.9E-29 T 23-04-2016 IPR008962 PapD-like NIAKO_RS01430 be6e40ed3b3669fe8d8b2b0ba435c8af 151 PANTHER PTHR37833 36 131 5.7E-20 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.170.130.10 118 229 2.9E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.60.40.1120 33 117 2.3E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.40.170.20 916 975 6.1E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.40.170.20 230 256 6.1E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.40.170.20 428 782 6.1E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.40.170.20 317 384 6.1E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Gene3D G3DSA:2.40.170.20 851 883 6.1E-43 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Pfam PF13715 CarboxypepD_reg-like domain 34 115 3.5E-16 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 9.1E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 229 3.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 32 1012 2.0E-254 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532:SF57 13 364 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532:SF57 381 443 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532:SF57 553 1010 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532:SF57 499 528 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF56935 932 1012 5.49E-81 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF56935 426 765 5.49E-81 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF56935 113 253 5.49E-81 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF56935 841 885 5.49E-81 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF56935 310 398 5.49E-81 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 SUPERFAMILY SSF49464 33 113 1.57E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532 13 364 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532 381 443 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532 553 1010 4.5E-238 T 23-04-2016 NIAKO_RS15305 4f509a7fb55b97d6989eabda55ad9358 1012 PANTHER PTHR11532 499 528 4.5E-238 T 23-04-2016 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 3.4E-29 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 SUPERFAMILY SSF46767 78 159 9.55E-30 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 SUPERFAMILY SSF53155 8 84 3.73E-17 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 8.0E-34 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 PANTHER PTHR10815 8 158 7.4E-53 T 23-04-2016 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 Gene3D G3DSA:1.10.10.10 77 159 1.8E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 PANTHER PTHR10815:SF5 8 158 7.4E-53 T 23-04-2016 NIAKO_RS07900 e6929fcb4eb365b184ce9e1bc7162af7 169 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 76 1.8E-4 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 NIAKO_RS00440 878e5497e95986a7b5d21f3e965e2eec 347 Pfam PF00534 Glycosyl transferases group 1 157 319 4.6E-27 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS00440 878e5497e95986a7b5d21f3e965e2eec 347 SUPERFAMILY SSF53756 39 341 9.03E-55 T 23-04-2016 NIAKO_RS00440 878e5497e95986a7b5d21f3e965e2eec 347 Gene3D G3DSA:3.40.50.2000 155 318 6.1E-25 T 23-04-2016 NIAKO_RS00440 878e5497e95986a7b5d21f3e965e2eec 347 PANTHER PTHR12526 52 91 5.3E-42 T 23-04-2016 NIAKO_RS00440 878e5497e95986a7b5d21f3e965e2eec 347 PANTHER PTHR12526 110 346 5.3E-42 T 23-04-2016 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 TIGRFAM TIGR01814 kynureninase: kynureninase 12 423 1.7E-133 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 Hamap MF_01970 Kynureninase [kynU]. 4 423 43.903 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 Gene3D G3DSA:3.90.1150.10 274 424 2.0E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 PIRSF PIRSF038800 2 428 2.1E-153 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 PANTHER PTHR14084 6 424 1.7E-203 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 Pfam PF00266 Aminotransferase class-V 54 349 1.4E-13 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 PANTHER PTHR14084:SF0 6 424 1.7E-203 T 23-04-2016 NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 SUPERFAMILY SSF53383 8 424 2.04E-77 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS22360 86ca43fa2b1ff07499875c515e3e46b3 428 Gene3D G3DSA:3.40.640.10 79 255 2.3E-13 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF49464 156 238 1.96E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 354 384 3.2E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.60.40.1120 157 241 3.2E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532:SF57 711 1229 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532:SF57 142 287 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532:SF57 306 615 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532 711 1229 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532 142 287 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 PANTHER PTHR11532 306 615 1.4E-128 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.170.130.10 254 380 2.5E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 157 1231 8.8E-160 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF56935 1052 1096 1.32E-60 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF56935 1142 1190 1.32E-60 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF56935 620 991 1.32E-60 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF56935 236 403 1.32E-60 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 SUPERFAMILY SSF56935 486 574 1.32E-60 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Pfam PF13715 CarboxypepD_reg-like domain 158 240 3.2E-12 T 23-04-2016 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Pfam PF07715 TonB-dependent Receptor Plug Domain 253 378 3.5E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.40.170.20 381 401 3.6E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.40.170.20 696 998 3.6E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.40.170.20 495 635 3.6E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13640 3f5a274d039782bd53d24015bbc8780d 1231 Gene3D G3DSA:2.40.170.20 1061 1190 3.6E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 PANTHER PTHR22925:SF40 195 458 9.1E-49 T 23-04-2016 NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 PANTHER PTHR22925:SF40 56 172 9.1E-49 T 23-04-2016 NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 Pfam PF17132 alpha-L-rhamnosidase 46 804 1.0E-200 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 SUPERFAMILY SSF49785 851 1004 3.06E-17 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 Gene3D G3DSA:2.60.120.260 852 967 4.6E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 PANTHER PTHR22925 195 458 9.1E-49 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17265 7aecb84c702f53b2087121bb10552564 1008 PANTHER PTHR22925 56 172 9.1E-49 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 Gene3D G3DSA:1.10.10.60 127 174 1.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 Pfam PF12833 Helix-turn-helix domain 96 173 2.0E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 PANTHER PTHR11019 99 181 3.9E-16 T 23-04-2016 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 SMART SM00342 87 173 1.4E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 PANTHER PTHR11019:SF50 99 181 3.9E-16 T 23-04-2016 NIAKO_RS00130 cc76e84e8e319be0ac28055f1c95af79 186 SUPERFAMILY SSF46689 127 174 4.17E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 58 190 9.1E-8 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 191 3.3E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 PANTHER PTHR12725 1 196 3.5E-24 T 23-04-2016 NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 Gene3D G3DSA:1.10.150.240 19 87 1.4E-12 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 Gene3D G3DSA:3.40.50.1000 3 18 1.3E-25 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 Gene3D G3DSA:3.40.50.1000 88 197 1.3E-25 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 PANTHER PTHR12725:SF63 1 196 3.5E-24 T 23-04-2016 NIAKO_RS30040 78b570fd6151b5ea63db1a8f5451ca32 203 SUPERFAMILY SSF56784 5 199 8.93E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Gene3D G3DSA:3.30.365.10 502 702 2.6E-42 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 SUPERFAMILY SSF56003 21 240 1.43E-37 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 SUPERFAMILY SSF56003 309 702 9.55E-100 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 47 174 4.2E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 571 656 9.8E-17 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 310 560 3.5E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 PANTHER PTHR11908 118 698 4.3E-141 T 23-04-2016 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 SMART SM01008 206 284 2.4E-17 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 PIRSF PIRSF036389 1 710 1.2E-223 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Gene3D G3DSA:3.90.1170.50 175 282 1.2E-19 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Gene3D G3DSA:3.30.365.10 46 173 2.0E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 PANTHER PTHR11908:SF2 118 698 4.3E-141 T 23-04-2016 NIAKO_RS17515 6addf648fa4b9eada711ccf1b1270941 710 Gene3D G3DSA:3.30.365.10 311 427 8.3E-27 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 Gene3D G3DSA:1.10.10.10 6 104 1.6E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 SMART SM00418 6 87 2.9E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 SUPERFAMILY SSF46785 6 96 9.66E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 PANTHER PTHR33154 6 96 7.6E-20 T 23-04-2016 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.6E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.6E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.6E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS16925 fa84207cab7a6343a80f81921f41b0ff 106 Pfam PF12840 Helix-turn-helix domain 6 63 6.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 13 194 37.937 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 PANTHER PTHR11109 10 193 1.7E-107 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 SUPERFAMILY SSF55620 18 194 1.26E-76 T 23-04-2016 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 Pfam PF01227 GTP cyclohydrolase I 20 193 4.1E-76 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 Gene3D G3DSA:1.10.286.10 19 64 2.0E-19 T 23-04-2016 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 Gene3D G3DSA:3.30.1130.10 67 195 5.5E-61 T 23-04-2016 NIAKO_RS24960 ff36566156cb4b83c3a3e8b0e9fe354e 198 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 20 194 3.7E-78 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 Gene3D G3DSA:3.40.50.720 36 288 1.3E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 SUPERFAMILY SSF51735 39 294 3.72E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 122 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 58 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PANTHER PTHR24320 20 299 1.7E-80 T 23-04-2016 NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 PANTHER PTHR24320 315 331 1.7E-80 T 23-04-2016 NIAKO_RS29295 11aa859a12b30aa189b2c757c91c9dd1 332 Pfam PF00106 short chain dehydrogenase 41 170 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 Pfam PF02625 XdhC and CoxI family 14 81 1.8E-21 T 23-04-2016 IPR003777 XdhC- CoxI NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 Pfam PF13478 XdhC Rossmann domain 208 352 2.1E-36 T 23-04-2016 IPR027051 XdhC Rossmann domain NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 PANTHER PTHR30388 173 379 7.9E-87 T 23-04-2016 NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 PANTHER PTHR30388 5 129 7.9E-87 T 23-04-2016 NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 PANTHER PTHR30388:SF4 173 379 7.9E-87 T 23-04-2016 NIAKO_RS25325 cf6707c9cd066f0786bdfab7b1843662 379 PANTHER PTHR30388:SF4 5 129 7.9E-87 T 23-04-2016 NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 PANTHER PTHR10954 13 196 1.1E-62 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 PANTHER PTHR10954:SF10 13 196 1.1E-62 T 23-04-2016 NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 191 32.769 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 Pfam PF01351 Ribonuclease HII 13 189 5.2E-35 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 SUPERFAMILY SSF53098 5 196 1.43E-63 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS32070 728be6ee14e95554bff61298bd51a49f 199 Gene3D G3DSA:3.30.420.10 13 152 2.2E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 PANTHER PTHR32479:SF10 50 457 9.7E-141 T 23-04-2016 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 SUPERFAMILY SSF46548 281 390 1.6E-14 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 SUPERFAMILY SSF100950 62 87 1.38E-35 T 23-04-2016 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 SUPERFAMILY SSF100950 133 293 1.38E-35 T 23-04-2016 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Gene3D G3DSA:3.40.50.10420 62 126 3.7E-42 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Gene3D G3DSA:3.40.50.10420 187 293 3.7E-42 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Pfam PF13183 4Fe-4S dicluster domain 309 375 4.1E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Gene3D G3DSA:1.10.1060.10 296 389 3.5E-10 T 23-04-2016 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Pfam PF11870 Domain of unknown function (DUF3390) 392 456 5.4E-7 T 23-04-2016 IPR024569 4Fe-4S binding protein, C-terminal NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 46 427 1.7E-141 T 23-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 311 322 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 PANTHER PTHR32479 50 457 9.7E-141 T 23-04-2016 NIAKO_RS28490 d8e4eb7328e7521cf989e6fb12e0889e 458 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 292 1.0E-44 T 23-04-2016 IPR003741 LUD domain NIAKO_RS04080 b7f0ba10596da46da2a21bdc7ffb9a8d 128 SUPERFAMILY SSF103247 2 127 3.66E-36 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS04080 b7f0ba10596da46da2a21bdc7ffb9a8d 128 PANTHER PTHR38342 1 128 2.4E-35 T 23-04-2016 NIAKO_RS04080 b7f0ba10596da46da2a21bdc7ffb9a8d 128 Pfam PF03625 Domain of unknown function DUF302 35 98 7.9E-24 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS04080 b7f0ba10596da46da2a21bdc7ffb9a8d 128 Gene3D G3DSA:3.30.310.70 3 127 6.3E-42 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS04080 b7f0ba10596da46da2a21bdc7ffb9a8d 128 PIRSF PIRSF021774 1 128 2.7E-39 T 23-04-2016 IPR016796 Uncharacterised conserved protein UCP021774 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PANTHER PTHR19375 493 723 6.1E-74 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PANTHER PTHR19375 3 367 6.1E-74 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 178 188 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 319 335 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 116 136 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 350 370 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 34 46 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PRINTS PR00301 70kDa heat shock protein signature 5 18 1.0E-22 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Gene3D G3DSA:3.90.640.10 206 295 2.3E-7 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 9 16 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Gene3D G3DSA:2.60.34.10 495 610 5.0E-5 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 SUPERFAMILY SSF100920 495 602 1.03E-6 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 SUPERFAMILY SSF53067 7 157 2.17E-33 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PANTHER PTHR19375:SF144 493 723 6.1E-74 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 PANTHER PTHR19375:SF144 3 367 6.1E-74 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 SUPERFAMILY SSF53067 169 365 1.71E-40 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Gene3D G3DSA:3.30.420.40 173 205 3.8E-22 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Gene3D G3DSA:3.30.420.40 304 341 3.8E-22 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Gene3D G3DSA:3.30.420.40 7 172 2.8E-38 T 23-04-2016 NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Pfam PF00012 Hsp70 protein 8 77 1.6E-14 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS25500 8a4782cfdc778c78b1f4e57a79dae3f2 842 Pfam PF00012 Hsp70 protein 91 365 3.0E-49 T 23-04-2016 IPR013126 Heat shock protein 70 family NIAKO_RS00445 0c4fa65aa13e14212595782fa10477f6 281 Gene3D G3DSA:3.90.850.10 68 278 2.2E-28 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00445 0c4fa65aa13e14212595782fa10477f6 281 PANTHER PTHR11820 59 277 6.3E-65 T 23-04-2016 NIAKO_RS00445 0c4fa65aa13e14212595782fa10477f6 281 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 104 277 9.2E-19 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00445 0c4fa65aa13e14212595782fa10477f6 281 SUPERFAMILY SSF56529 60 277 1.44E-30 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00445 0c4fa65aa13e14212595782fa10477f6 281 PANTHER PTHR11820:SF82 59 277 6.3E-65 T 23-04-2016 NIAKO_RS04125 12e2e0630b6f3a20859049e616eea89e 102 SUPERFAMILY SSF52821 14 91 1.26E-21 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04125 12e2e0630b6f3a20859049e616eea89e 102 Pfam PF00581 Rhodanese-like domain 16 93 1.0E-12 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04125 12e2e0630b6f3a20859049e616eea89e 102 SMART SM00450 10 101 2.1E-11 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS04125 12e2e0630b6f3a20859049e616eea89e 102 Gene3D G3DSA:3.40.250.10 16 93 6.4E-21 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 Pfam PF02560 Cyanate lyase C-terminal domain 80 145 2.7E-27 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 Gene3D G3DSA:3.30.1160.10 82 147 3.1E-25 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 55.857 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 Gene3D G3DSA:1.10.260.40 1 78 1.1E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 TIGRFAM TIGR00673 cynS: cyanase 6 147 7.7E-41 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PRINTS PR01693 Cyanase signature 34 51 4.3E-25 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PRINTS PR01693 Cyanase signature 101 117 4.3E-25 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PRINTS PR01693 Cyanase signature 14 29 4.3E-25 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PRINTS PR01693 Cyanase signature 83 97 4.3E-25 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PRINTS PR01693 Cyanase signature 132 142 4.3E-25 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 SUPERFAMILY SSF47413 3 77 1.58E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PANTHER PTHR34186 5 147 1.6E-43 T 23-04-2016 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PANTHER PTHR34186:SF2 5 147 1.6E-43 T 23-04-2016 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 SUPERFAMILY SSF55234 80 147 1.31E-21 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 SMART SM01116 75 147 4.2E-27 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS16575 db6c1af0ded248d6ebfe792f17c03311 147 PIRSF PIRSF001263 1 147 4.8E-44 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 Gene3D G3DSA:3.40.50.2300 2 132 2.6E-40 T 23-04-2016 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 Gene3D G3DSA:1.10.8.60 312 380 7.4E-22 T 23-04-2016 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 PANTHER PTHR32071 1 378 1.5E-174 T 23-04-2016 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 SMART SM00448 2 113 1.7E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 SUPERFAMILY SSF52172 2 183 3.42E-46 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 Pfam PF00158 Sigma-54 interaction domain 139 305 3.7E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 SMART SM00382 159 310 1.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 SUPERFAMILY SSF52540 138 375 6.19E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 Gene3D G3DSA:3.40.50.300 136 310 1.6E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS07860 dee53b4939e5b41c79d4384dd03d091c 387 Pfam PF00072 Response regulator receiver domain 4 113 9.2E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 2 387 47.726 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 PANTHER PTHR11601:SF45 5 387 6.7E-189 T 23-04-2016 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 SUPERFAMILY SSF53383 6 380 1.46E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 Gene3D G3DSA:3.40.640.10 18 253 6.0E-95 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 PIRSF PIRSF005572 3 384 1.4E-130 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 Gene3D G3DSA:3.90.1150.10 254 376 9.9E-48 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 PANTHER PTHR11601 5 387 6.7E-189 T 23-04-2016 NIAKO_RS27755 3a8e1d92be1b65a796a40b5c835032f8 388 Pfam PF00266 Aminotransferase class-V 6 370 2.8E-90 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PANTHER PTHR24322:SF417 151 182 2.1E-50 T 23-04-2016 NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PANTHER PTHR24322:SF417 9 135 2.1E-50 T 23-04-2016 NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PANTHER PTHR24322 151 182 2.1E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PANTHER PTHR24322 9 135 2.1E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 SUPERFAMILY SSF51735 4 248 1.62E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 Gene3D G3DSA:3.40.50.720 4 249 1.9E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 Pfam PF00106 short chain dehydrogenase 5 190 1.8E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.4E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.4E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.4E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.4E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.2E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 9.2E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33585 d52a1b060c12e918ccdb107ce5356b93 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 9.2E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10630 5a295e47300a0d068c36426f84c846de 146 Pfam PF02566 OsmC-like protein 36 130 1.6E-15 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS10630 5a295e47300a0d068c36426f84c846de 146 SUPERFAMILY SSF82784 1 132 2.75E-31 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS10630 5a295e47300a0d068c36426f84c846de 146 PANTHER PTHR39624 1 146 1.5E-16 T 23-04-2016 NIAKO_RS10630 5a295e47300a0d068c36426f84c846de 146 Gene3D G3DSA:3.30.300.20 1 135 1.4E-51 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS10630 5a295e47300a0d068c36426f84c846de 146 PANTHER PTHR39624:SF2 1 146 1.5E-16 T 23-04-2016 NIAKO_RS07575 1eceed7e6da94e7845dfbcfcbe7fdf69 805 SUPERFAMILY SSF49464 5 92 1.44E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS07575 1eceed7e6da94e7845dfbcfcbe7fdf69 805 PANTHER PTHR11532:SF57 2 90 6.6E-14 T 23-04-2016 NIAKO_RS07575 1eceed7e6da94e7845dfbcfcbe7fdf69 805 Gene3D G3DSA:2.60.40.1120 5 99 6.3E-20 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07575 1eceed7e6da94e7845dfbcfcbe7fdf69 805 PANTHER PTHR11532 2 90 6.6E-14 T 23-04-2016 NIAKO_RS07575 1eceed7e6da94e7845dfbcfcbe7fdf69 805 Pfam PF13715 CarboxypepD_reg-like domain 6 90 5.2E-21 T 23-04-2016 NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 Gene3D G3DSA:2.10.109.10 130 212 2.3E-7 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 Gene3D G3DSA:1.10.260.40 1 71 4.2E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 SUPERFAMILY SSF47413 1 55 1.15E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 SMART SM00530 6 61 2.3E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 SUPERFAMILY SSF51306 129 211 1.59E-8 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 Pfam PF00717 Peptidase S24-like 134 201 2.3E-6 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS01200 1e2e380850f1fb7c4bfec96a8bf02273 220 Pfam PF12844 Helix-turn-helix domain 4 65 3.4E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 SUPERFAMILY SSF51556 55 390 4.92E-86 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 Pfam PF01979 Amidohydrolase family 52 443 6.2E-18 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 Gene3D G3DSA:2.30.40.10 4 70 1.0E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 PANTHER PTHR11647 1 458 1.3E-124 T 23-04-2016 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 ProSitePatterns PS00483 Dihydroorotase signature 2. 309 320 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 PANTHER PTHR11647:SF1 1 458 1.3E-124 T 23-04-2016 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 Gene3D G3DSA:3.20.20.140 71 428 7.6E-94 T 23-04-2016 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 SUPERFAMILY SSF51338 1 54 2.8E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS27305 2e7e8831575a86c58d4ea8dc2b7dcb83 462 SUPERFAMILY SSF51338 389 452 2.8E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS05645 6eaa67b866c6e80cf9d0252138cf4ea6 413 PANTHER PTHR31302 130 412 4.9E-69 T 23-04-2016 NIAKO_RS05645 6eaa67b866c6e80cf9d0252138cf4ea6 413 PANTHER PTHR31302:SF6 130 412 4.9E-69 T 23-04-2016 NIAKO_RS05645 6eaa67b866c6e80cf9d0252138cf4ea6 413 SUPERFAMILY SSF56300 166 412 4.98E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS05645 6eaa67b866c6e80cf9d0252138cf4ea6 413 Pfam PF00149 Calcineurin-like phosphoesterase 171 353 5.7E-19 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS05645 6eaa67b866c6e80cf9d0252138cf4ea6 413 Gene3D G3DSA:3.60.21.10 170 359 1.5E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 PANTHER PTHR24221 9 60 1.4E-175 T 23-04-2016 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 PANTHER PTHR24221 80 606 1.4E-175 T 23-04-2016 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 Gene3D G3DSA:3.40.50.300 362 592 1.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 SMART SM00382 388 575 4.1E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 SUPERFAMILY SSF90123 5 48 3.01E-62 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 SUPERFAMILY SSF90123 75 343 3.01E-62 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 Pfam PF00005 ABC transporter 380 528 4.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 SUPERFAMILY SSF52540 355 599 2.01E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 Pfam PF00664 ABC transporter transmembrane region 18 316 7.7E-36 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS18130 c34a54ace71e818ee345613f6da3b7f7 607 Gene3D G3DSA:1.20.1560.10 7 343 8.4E-57 T 23-04-2016 NIAKO_RS17090 805bdf4cf7c686783b835c24c959f303 206 Gene3D G3DSA:3.40.430.10 3 205 1.0E-30 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS17090 805bdf4cf7c686783b835c24c959f303 206 PANTHER PTHR38011 2 206 2.3E-51 T 23-04-2016 NIAKO_RS17090 805bdf4cf7c686783b835c24c959f303 206 Pfam PF01872 RibD C-terminal domain 3 190 3.0E-19 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS17090 805bdf4cf7c686783b835c24c959f303 206 SUPERFAMILY SSF53597 3 200 2.75E-23 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS17090 805bdf4cf7c686783b835c24c959f303 206 PANTHER PTHR38011:SF1 2 206 2.3E-51 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 Gene3D G3DSA:3.40.190.10 23 129 2.7E-35 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 Gene3D G3DSA:3.40.190.10 130 248 3.0E-9 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 Pfam PF13531 Bacterial extracellular solute-binding protein 24 249 5.6E-44 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 PANTHER PTHR30632 5 250 3.3E-34 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 248 1.3E-54 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 SUPERFAMILY SSF53850 23 250 5.18E-52 T 23-04-2016 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 PIRSF PIRSF004846 3 252 4.9E-51 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NIAKO_RS09670 285a486928190f5c6aac84808218b4ae 252 PANTHER PTHR30632:SF0 5 250 3.3E-34 T 23-04-2016 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 Pfam PF00912 Transglycosylase 71 246 3.3E-48 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 PANTHER PTHR32282:SF0 5 706 1.8E-154 T 23-04-2016 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 Gene3D G3DSA:1.10.3810.10 80 251 2.8E-48 T 23-04-2016 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 Pfam PF00905 Penicillin binding protein transpeptidase domain 324 557 1.3E-17 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 SUPERFAMILY SSF53955 60 280 1.29E-56 T 23-04-2016 IPR023346 Lysozyme-like domain NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 SUPERFAMILY SSF56601 232 657 3.05E-85 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 PANTHER PTHR32282 5 706 1.8E-154 T 23-04-2016 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 60 789 1.9E-210 T 23-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 Gene3D G3DSA:3.40.710.10 252 649 2.9E-71 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS24865 bb369c5a74efc88b5f2b55ceac1cb961 794 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 706 787 4.6E-13 T 23-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 PANTHER PTHR10909:SF320 27 332 5.0E-183 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 PANTHER PTHR10909:SF320 351 437 5.0E-183 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 SUPERFAMILY SSF56645 27 264 1.57E-74 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 150 162 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Gene3D G3DSA:2.40.110.10 147 240 3.4E-37 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Gene3D G3DSA:1.10.540.10 27 145 7.0E-31 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Gene3D G3DSA:1.20.140.10 241 424 6.3E-57 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 254 415 1.3E-34 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 PANTHER PTHR10909 27 332 5.0E-183 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 PANTHER PTHR10909 351 437 5.0E-183 T 23-04-2016 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 241 2.5E-23 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 379 398 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 144 1.5E-25 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS31960 ca206e97cdba7d9cccd3ddf2b6c18a8c 596 SUPERFAMILY SSF47203 251 425 5.15E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 PANTHER PTHR30026 6 438 1.4E-52 T 23-04-2016 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 PANTHER PTHR30026:SF6 6 438 1.4E-52 T 23-04-2016 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 Pfam PF02321 Outer membrane efflux protein 31 225 1.6E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 Pfam PF02321 Outer membrane efflux protein 250 436 2.7E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 SUPERFAMILY SSF56954 6 438 3.92E-65 T 23-04-2016 NIAKO_RS15240 577b3c929d1559a685d018f4cdd66aee 438 Gene3D G3DSA:1.20.1600.10 24 436 1.4E-51 T 23-04-2016 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 108 219 2.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Gene3D G3DSA:2.40.170.20 224 713 1.1E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Pfam PF13715 CarboxypepD_reg-like domain 23 105 1.3E-18 T 23-04-2016 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Pfam PF00593 TonB dependent receptor 505 712 1.3E-13 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Gene3D G3DSA:2.60.40.1120 22 108 1.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 Gene3D G3DSA:2.170.130.10 109 223 1.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 PANTHER PTHR32552:SF36 109 745 1.8E-77 T 23-04-2016 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 PANTHER PTHR32552 109 745 1.8E-77 T 23-04-2016 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 SUPERFAMILY SSF56935 97 738 7.69E-77 T 23-04-2016 NIAKO_RS10080 f0ee78296a6b790ef6fc3d65aacc98ae 745 SUPERFAMILY SSF49464 22 103 1.44E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS34840 c6f02c802aa2f75a4557994e5625797f 288 Pfam PF01618 MotA/TolQ/ExbB proton channel family 142 270 2.6E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NIAKO_RS34840 c6f02c802aa2f75a4557994e5625797f 288 PANTHER PTHR30625 16 285 5.1E-119 T 23-04-2016 NIAKO_RS34840 c6f02c802aa2f75a4557994e5625797f 288 PANTHER PTHR30625:SF7 16 285 5.1E-119 T 23-04-2016 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 SMART SM01134 71 232 3.4E-44 T 23-04-2016 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 SUPERFAMILY SSF46785 4 60 1.49E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 Gene3D G3DSA:3.40.50.1360 75 210 2.2E-8 T 23-04-2016 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.0E-14 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 PANTHER PTHR30363:SF1 1 249 1.1E-54 T 23-04-2016 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 Pfam PF00455 DeoR C terminal sensor domain 74 230 2.6E-37 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 Gene3D G3DSA:1.10.10.10 1 55 2.4E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 SUPERFAMILY SSF100950 74 232 1.77E-24 T 23-04-2016 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.3E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.3E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 SMART SM00420 6 58 2.0E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS04415 a666eece6cac284e22da0a58affb64db 249 PANTHER PTHR30363 1 249 1.1E-54 T 23-04-2016 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 SUPERFAMILY SSF51445 143 430 4.08E-59 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 Pfam PF00703 Glycosyl hydrolases family 2 88 146 2.0E-12 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 Gene3D G3DSA:2.60.40.320 44 146 6.1E-23 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 186 300 4.9E-8 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 Gene3D G3DSA:3.20.20.80 160 430 2.7E-50 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 PANTHER PTHR10066 1 449 3.3E-159 T 23-04-2016 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 SUPERFAMILY SSF49785 2 53 2.55E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 SUPERFAMILY SSF49303 58 146 4.6E-15 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 Gene3D G3DSA:2.60.120.260 2 43 1.5E-9 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS06150 0c09a1bb78da7d6c9de3fdc286e6ee29 450 PANTHER PTHR10066:SF44 1 449 3.3E-159 T 23-04-2016 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 122 1.0E-34 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 SUPERFAMILY SSF81330 12 118 4.97E-31 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 PANTHER PTHR30266:SF2 1 123 1.0E-40 T 23-04-2016 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 PANTHER PTHR30266 1 123 1.0E-40 T 23-04-2016 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 123 22.296 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.4E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 78 86 2.4E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 87 96 2.4E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS28085 6cb9e3f92a2d1c97ae8e57b55565cb13 123 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 122 1.9E-38 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 Pfam PF17162 Domain of unknown function (DUF5118) 36 84 7.4E-20 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 Gene3D G3DSA:3.40.390.10 264 397 1.7E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 Pfam PF16313 Met-zincin 431 745 5.2E-95 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 SUPERFAMILY SSF55486 477 522 1.42E-10 T 23-04-2016 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 SUPERFAMILY SSF55486 247 424 1.42E-10 T 23-04-2016 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 Pfam PF17148 Domain of unknown function (DUF5117) 93 297 3.4E-53 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS15155 02e2614e238b3ca93029f418b460f807 836 PANTHER PTHR38478 39 767 5.8E-125 T 23-04-2016 NIAKO_RS02380 edc7f73fe45fbbb39fd13f6993317eb3 127 PANTHER PTHR26402 7 126 8.8E-35 T 23-04-2016 NIAKO_RS02380 edc7f73fe45fbbb39fd13f6993317eb3 127 Gene3D G3DSA:3.40.50.2300 4 126 2.7E-32 T 23-04-2016 NIAKO_RS02380 edc7f73fe45fbbb39fd13f6993317eb3 127 Pfam PF00072 Response regulator receiver domain 9 121 1.1E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS02380 edc7f73fe45fbbb39fd13f6993317eb3 127 SUPERFAMILY SSF52172 3 125 1.27E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS02380 edc7f73fe45fbbb39fd13f6993317eb3 127 SMART SM00448 7 121 2.2E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03355 8ac828242ae4308da98242a9d3a75591 372 Gene3D G3DSA:3.30.1330.60 240 340 1.3E-4 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS24305 be154fed59911dd7992b1ceba5f3fab3 1693 SUPERFAMILY SSF52129 395 779 2.51E-22 T 23-04-2016 IPR029030 Caspase-like domain NIAKO_RS24305 be154fed59911dd7992b1ceba5f3fab3 1693 Pfam PF01364 Peptidase family C25 399 778 4.6E-46 T 23-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 NIAKO_RS24305 be154fed59911dd7992b1ceba5f3fab3 1693 Pfam PF07705 CARDB 802 892 1.6E-6 T 23-04-2016 IPR011635 CARDB domain NIAKO_RS24305 be154fed59911dd7992b1ceba5f3fab3 1693 Gene3D G3DSA:3.40.50.10390 395 480 9.2E-4 T 23-04-2016 IPR029031 Gingipain, N-terminal NIAKO_RS24305 be154fed59911dd7992b1ceba5f3fab3 1693 Gene3D G3DSA:3.40.50.1460 541 779 2.2E-26 T 23-04-2016 IPR029030 Caspase-like domain NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 139 161 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 29 45 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 280 306 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 46 67 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 176 205 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PRINTS PR00073 Coprogen oxidase signature 252 279 4.9E-61 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PIRSF PIRSF000166 1 320 2.0E-123 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 SUPERFAMILY SSF102886 3 320 5.62E-120 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 PANTHER PTHR10755 1 320 1.4E-167 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 Gene3D G3DSA:3.40.1500.10 3 320 4.1E-126 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28185 8fef93f4318e7048c5401e392a5c4083 320 Pfam PF01218 Coproporphyrinogen III oxidase 9 320 5.9E-129 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 Pfam PF02566 OsmC-like protein 39 133 3.8E-15 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 SUPERFAMILY SSF82784 17 134 8.24E-28 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 PANTHER PTHR39624:SF2 9 150 6.8E-33 T 23-04-2016 NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 SUPERFAMILY SSF54862 154 209 4.98E-5 T 23-04-2016 NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 Pfam PF06902 Divergent 4Fe-4S mono-cluster 148 210 1.0E-22 T 23-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 PANTHER PTHR39624 9 150 6.8E-33 T 23-04-2016 NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 Gene3D G3DSA:3.30.300.20 15 136 6.9E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS36265 6310bdf3d53d823a831ba8a0fdde9d33 220 Gene3D G3DSA:3.30.70.20 154 216 6.3E-5 T 23-04-2016 NIAKO_RS19660 3c4933719e2ff723b9ce0492eed08691 182 SUPERFAMILY SSF88946 13 101 5.49E-8 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19660 3c4933719e2ff723b9ce0492eed08691 182 Gene3D G3DSA:1.10.1740.10 12 108 1.2E-7 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 PANTHER PTHR16026 227 481 4.8E-22 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 PANTHER PTHR16026 502 746 4.8E-22 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 SUPERFAMILY SSF69318 211 469 1.31E-37 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Gene3D G3DSA:2.130.10.130 456 541 4.0E-9 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Gene3D G3DSA:2.130.10.130 231 429 1.0E-25 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 286 355 4.2E-15 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 457 539 4.5E-12 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 SUPERFAMILY SSF48452 57 125 6.9E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 SUPERFAMILY SSF48452 154 188 6.9E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Gene3D G3DSA:1.25.40.10 66 188 1.6E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 Pfam PF07593 ASPIC and UnbV 637 705 1.3E-12 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 SUPERFAMILY SSF69318 397 631 6.02E-25 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 PANTHER PTHR16026:SF0 227 481 4.8E-22 T 23-04-2016 NIAKO_RS17255 b57902eb6bd83f2f3ac8848286ae668b 747 PANTHER PTHR16026:SF0 502 746 4.8E-22 T 23-04-2016 NIAKO_RS08605 70004bd135c8d4a9ca1a857efed8a517 489 Pfam PF14322 Starch-binding associating with outer membrane 28 231 3.7E-19 T 23-04-2016 NIAKO_RS08605 70004bd135c8d4a9ca1a857efed8a517 489 Gene3D G3DSA:1.25.40.10 215 302 2.4E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08605 70004bd135c8d4a9ca1a857efed8a517 489 Gene3D G3DSA:1.25.40.10 341 432 2.4E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08605 70004bd135c8d4a9ca1a857efed8a517 489 SUPERFAMILY SSF48452 22 485 2.66E-88 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08605 70004bd135c8d4a9ca1a857efed8a517 489 Pfam PF07980 SusD family 316 462 4.2E-21 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 ProSitePatterns PS01008 DnaA protein signature. 432 451 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Pfam PF11638 DnaA N-terminal domain 7 67 1.3E-15 T 23-04-2016 IPR024633 DnaA N-terminal domain NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Pfam PF00308 Bacterial dnaA protein 138 356 1.5E-81 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PANTHER PTHR30050:SF2 4 108 3.0E-179 T 23-04-2016 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PANTHER PTHR30050:SF2 136 475 3.0E-179 T 23-04-2016 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 SMART SM00760 382 451 4.7E-36 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 432 451 3.0E-43 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 3.0E-43 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 270 297 3.0E-43 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 236 250 3.0E-43 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 192 3.0E-43 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 SMART SM00382 171 301 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 SUPERFAMILY SSF52540 137 347 1.02E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Gene3D G3DSA:1.10.8.60 305 373 2.6E-28 T 23-04-2016 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Gene3D G3DSA:1.10.1750.10 374 473 2.3E-38 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Gene3D G3DSA:3.40.50.300 130 302 6.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 471 3.8E-156 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 451 4.0E-30 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 473 30.099 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 SUPERFAMILY SSF48295 369 472 3.92E-34 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PANTHER PTHR30050 4 108 3.0E-179 T 23-04-2016 NIAKO_RS00010 687ffa295ab4522197bf6f1918d985c9 477 PANTHER PTHR30050 136 475 3.0E-179 T 23-04-2016 NIAKO_RS00850 f00fd9c98599ca2ea5da0cdd88b1d5f3 498 PANTHER PTHR35148 5 480 1.4E-36 T 23-04-2016 NIAKO_RS00850 f00fd9c98599ca2ea5da0cdd88b1d5f3 498 Pfam PF12771 Starch-binding associating with outer membrane 126 483 6.1E-34 T 23-04-2016 NIAKO_RS00850 f00fd9c98599ca2ea5da0cdd88b1d5f3 498 SUPERFAMILY SSF48452 24 497 6.2E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Pfam PF13620 Carboxypeptidase regulatory-like domain 30 108 2.7E-14 T 23-04-2016 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 SUPERFAMILY SSF49464 27 109 2.12E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Gene3D G3DSA:2.170.130.10 152 228 8.4E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 228 1.1E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Gene3D G3DSA:2.60.40.1120 30 107 1.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 SUPERFAMILY SSF56935 122 805 7.63E-53 T 23-04-2016 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Pfam PF14905 Outer membrane protein beta-barrel family 388 803 1.2E-87 T 23-04-2016 NIAKO_RS20780 32cd5f0a28ea0f759241d022f05229b8 824 Gene3D G3DSA:2.40.170.20 229 805 5.5E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 SUPERFAMILY SSF111369 182 263 4.18E-10 T 23-04-2016 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 293 4.1E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 PANTHER PTHR30386:SF0 6 343 4.1E-79 T 23-04-2016 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 Gene3D G3DSA:2.40.50.100 216 248 2.2E-17 T 23-04-2016 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 Gene3D G3DSA:2.40.50.100 55 85 2.2E-17 T 23-04-2016 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 SUPERFAMILY SSF111369 54 106 3.79E-9 T 23-04-2016 NIAKO_RS20815 0473ed86dc078273f64902536b1805e4 347 PANTHER PTHR30386 6 343 4.1E-79 T 23-04-2016 NIAKO_RS20770 27103ee688de0d1ba4a414bb0a2882db 303 Gene3D G3DSA:2.40.50.100 61 146 2.7E-8 T 23-04-2016 NIAKO_RS20770 27103ee688de0d1ba4a414bb0a2882db 303 Pfam PF13437 HlyD family secretion protein 116 208 1.8E-13 T 23-04-2016 NIAKO_RS20770 27103ee688de0d1ba4a414bb0a2882db 303 PANTHER PTHR30469 117 302 1.4E-14 T 23-04-2016 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 PANTHER PTHR30572:SF4 285 367 1.7E-76 T 23-04-2016 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 PANTHER PTHR30572:SF4 409 803 1.7E-76 T 23-04-2016 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 Pfam PF12704 MacB-like periplasmic core domain 438 607 1.8E-6 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 Pfam PF12704 MacB-like periplasmic core domain 20 248 3.4E-20 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 PANTHER PTHR30572 285 367 1.7E-76 T 23-04-2016 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 PANTHER PTHR30572 409 803 1.7E-76 T 23-04-2016 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 Pfam PF02687 FtsX-like permease family 295 406 5.7E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS07275 164b46fef7cf7090e3e92b691651f10b 803 Pfam PF02687 FtsX-like permease family 683 796 2.9E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 Gene3D G3DSA:2.60.40.1120 29 97 1.1E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 Pfam PF13715 CarboxypepD_reg-like domain 29 114 1.7E-16 T 23-04-2016 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 SUPERFAMILY SSF56935 110 464 3.37E-63 T 23-04-2016 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 SUPERFAMILY SSF56935 493 750 3.37E-63 T 23-04-2016 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 SUPERFAMILY SSF49464 27 112 4.32E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 Gene3D G3DSA:2.40.170.20 230 734 4.1E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 Gene3D G3DSA:2.170.130.10 111 222 1.6E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 PANTHER PTHR30069 27 371 9.8E-47 T 23-04-2016 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 PANTHER PTHR30069:SF1 27 371 9.8E-47 T 23-04-2016 NIAKO_RS20755 ea8e380f6ec7fb2d46a8e51f5e984639 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 223 7.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 SUPERFAMILY SSF51905 2 254 1.41E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 SUPERFAMILY SSF51905 357 419 1.41E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 524 1.4E-165 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 PIRSF PIRSF000171 1 534 3.5E-41 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 PANTHER PTHR11632:SF27 2 527 3.2E-243 T 23-04-2016 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Gene3D G3DSA:3.50.50.60 350 414 1.9E-95 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Gene3D G3DSA:3.50.50.60 2 242 1.9E-95 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 445 525 4.6E-13 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 SUPERFAMILY SSF46977 432 526 7.85E-26 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Pfam PF00890 FAD binding domain 4 393 2.4E-97 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 2.7E-9 T 23-04-2016 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.7E-9 T 23-04-2016 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Gene3D G3DSA:3.90.700.10 243 349 1.2E-41 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 Gene3D G3DSA:1.20.58.100 418 526 7.7E-27 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 SUPERFAMILY SSF56425 237 353 1.26E-41 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NIAKO_RS32875 13d43148273488e986d7994c2a56c1ee 535 PANTHER PTHR11632 2 527 3.2E-243 T 23-04-2016 NIAKO_RS15405 edd4f207daab1e33dba65f114c4666ce 142 Gene3D G3DSA:3.40.50.2300 5 132 5.0E-13 T 23-04-2016 NIAKO_RS15405 edd4f207daab1e33dba65f114c4666ce 142 Pfam PF00072 Response regulator receiver domain 13 121 2.2E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15405 edd4f207daab1e33dba65f114c4666ce 142 SUPERFAMILY SSF52172 5 130 2.99E-12 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 SMART SM00382 396 582 3.6E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 SUPERFAMILY SSF52540 362 606 5.43E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 Gene3D G3DSA:3.40.50.300 371 600 9.0E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 Pfam PF00005 ABC transporter 387 536 3.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 Pfam PF00664 ABC transporter transmembrane region 21 325 7.2E-36 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 PANTHER PTHR24221 86 606 1.1E-194 T 23-04-2016 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 PANTHER PTHR24221 4 54 1.1E-194 T 23-04-2016 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 SUPERFAMILY SSF90123 6 51 3.01E-56 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 SUPERFAMILY SSF90123 84 358 3.01E-56 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS28130 49a0ca53c6aedd341da82a123676d13c 609 Gene3D G3DSA:1.20.1560.10 6 353 4.6E-60 T 23-04-2016 NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 PANTHER PTHR23150 249 264 5.4E-29 T 23-04-2016 NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 PANTHER PTHR23150 284 390 5.4E-29 T 23-04-2016 NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 PANTHER PTHR23150 53 174 5.4E-29 T 23-04-2016 NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 PANTHER PTHR23150 463 507 5.4E-29 T 23-04-2016 NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 SUPERFAMILY SSF56436 248 373 1.43E-54 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 SUPERFAMILY SSF56436 52 171 1.43E-54 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 SUPERFAMILY SSF56436 453 501 1.43E-54 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 Pfam PF03781 Sulfatase-modifying factor enzyme 1 54 384 6.2E-37 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 Gene3D G3DSA:3.90.1580.10 40 171 7.9E-83 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 Gene3D G3DSA:3.90.1580.10 459 506 7.9E-83 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS34425 4ba63a13f9b79147ba5e597c5363f30e 527 Gene3D G3DSA:3.90.1580.10 248 379 7.9E-83 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Gene3D G3DSA:2.170.130.10 116 231 1.3E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 PANTHER PTHR11532 8 385 2.6E-225 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 PANTHER PTHR11532 471 1034 2.6E-225 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF49464 32 124 4.58E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 PANTHER PTHR11532:SF57 8 385 2.6E-225 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 PANTHER PTHR11532:SF57 471 1034 2.6E-225 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Pfam PF13715 CarboxypepD_reg-like domain 32 113 3.8E-16 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 228 7.8E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF56935 956 1033 2.93E-81 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF56935 880 924 2.93E-81 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF56935 458 810 2.93E-81 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF56935 331 419 2.93E-81 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 SUPERFAMILY SSF56935 109 252 2.93E-81 T 23-04-2016 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Gene3D G3DSA:2.40.170.20 871 925 3.7E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Gene3D G3DSA:2.40.170.20 338 810 3.7E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 Gene3D G3DSA:2.60.40.1120 32 115 1.5E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 1.1E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06575 c5e321a5ee88d2524c3a66c7a0d22dc0 1036 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1036 3.9E-239 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS00125 0266ec171be2f8c12316ad9be1b016ee 546 PANTHER PTHR10110 6 539 9.7E-95 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 NIAKO_RS00125 0266ec171be2f8c12316ad9be1b016ee 546 PANTHER PTHR10110:SF86 6 539 9.7E-95 T 23-04-2016 NIAKO_RS00125 0266ec171be2f8c12316ad9be1b016ee 546 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 537 4.7E-99 T 23-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 NIAKO_RS00125 0266ec171be2f8c12316ad9be1b016ee 546 Pfam PF00999 Sodium/hydrogen exchanger family 7 412 5.5E-63 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 91 425 1.6E-42 T 23-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 Gene3D G3DSA:2.60.40.1180 423 489 1.8E-15 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 PANTHER PTHR11069 47 496 1.3E-115 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 PRINTS PR00843 Glycosyl hydrolase family 30 signature 81 101 7.0E-9 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 PRINTS PR00843 Glycosyl hydrolase family 30 signature 217 234 7.0E-9 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 PRINTS PR00843 Glycosyl hydrolase family 30 signature 115 141 7.0E-9 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 SUPERFAMILY SSF51011 428 489 2.66E-5 T 23-04-2016 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 Gene3D G3DSA:3.20.20.80 67 422 8.4E-118 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 SUPERFAMILY SSF51445 91 429 1.05E-71 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 Gene3D G3DSA:2.80.10.50 509 626 4.5E-17 T 23-04-2016 NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 428 487 9.2E-16 T 23-04-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain NIAKO_RS03260 352c482c80595c31700d1e3a01bb0834 628 SUPERFAMILY SSF50405 508 626 1.26E-17 T 23-04-2016 IPR008999 Actin cross-linking NIAKO_RS09130 51ae951219fd64e5b2d4672c1c49f19b 113 Pfam PF03860 Domain of Unknown Function (DUF326) 33 52 5.9E-6 T 23-04-2016 IPR005560 Protein of unknown function DUF326 NIAKO_RS09130 51ae951219fd64e5b2d4672c1c49f19b 113 Pfam PF03860 Domain of Unknown Function (DUF326) 91 107 1.0E-4 T 23-04-2016 IPR005560 Protein of unknown function DUF326 NIAKO_RS09130 51ae951219fd64e5b2d4672c1c49f19b 113 PANTHER PTHR37310 4 111 2.7E-15 T 23-04-2016 NIAKO_RS09130 51ae951219fd64e5b2d4672c1c49f19b 113 Gene3D G3DSA:3.40.50.720 12 88 0.001 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 PIRSF PIRSF001563 2 429 8.0E-126 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 Pfam PF08245 Mur ligase middle domain 51 270 2.9E-16 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 Gene3D G3DSA:3.90.190.20 303 427 6.0E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 SUPERFAMILY SSF53244 303 427 3.66E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 SUPERFAMILY SSF53623 1 296 9.27E-91 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 PANTHER PTHR11136 28 427 3.3E-124 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 PANTHER PTHR11136:SF0 28 427 3.3E-124 T 23-04-2016 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 427 1.6E-116 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NIAKO_RS10290 9ae72be10a4d1185c645a35b70ae8464 429 Gene3D G3DSA:3.40.1190.10 14 296 2.0E-94 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS19535 368db3576b1c150286ebf6026f7026e1 96 SMART SM00530 16 71 4.0E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS19535 368db3576b1c150286ebf6026f7026e1 96 Pfam PF01381 Helix-turn-helix 17 71 6.8E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS19535 368db3576b1c150286ebf6026f7026e1 96 Gene3D G3DSA:1.10.260.40 10 78 5.4E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS19535 368db3576b1c150286ebf6026f7026e1 96 SUPERFAMILY SSF47413 8 75 8.7E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS28405 2207f75be54804341348d5d4954ed0d6 225 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 10 210 3.3E-35 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 NIAKO_RS28405 2207f75be54804341348d5d4954ed0d6 225 PANTHER PTHR12835 17 224 3.0E-34 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 NIAKO_RS28405 2207f75be54804341348d5d4954ed0d6 225 Gene3D G3DSA:3.30.930.10 2 175 1.3E-46 T 23-04-2016 NIAKO_RS28405 2207f75be54804341348d5d4954ed0d6 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 13 116 2.5E-7 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NIAKO_RS28405 2207f75be54804341348d5d4954ed0d6 225 SUPERFAMILY SSF55681 6 175 2.82E-43 T 23-04-2016 NIAKO_RS00645 8fea174137b2206bbeb98a1657d5a53e 266 Pfam PF06167 Glucose-regulated metallo-peptidase M90 43 250 2.3E-24 T 23-04-2016 IPR010384 MtfA family NIAKO_RS00645 8fea174137b2206bbeb98a1657d5a53e 266 Gene3D G3DSA:3.40.390.10 49 252 1.7E-17 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS00645 8fea174137b2206bbeb98a1657d5a53e 266 PANTHER PTHR30164 2 262 3.3E-14 T 23-04-2016 NIAKO_RS00645 8fea174137b2206bbeb98a1657d5a53e 266 SUPERFAMILY SSF55486 81 254 9.16E-22 T 23-04-2016 NIAKO_RS03020 11e5a2de3c62cd3125a294d4fd59a135 277 Pfam PF07582 AP endonuclease family 2 C terminus 231 271 2.5E-5 T 23-04-2016 IPR011418 AP endonuclease, family 2, C-terminal NIAKO_RS03020 11e5a2de3c62cd3125a294d4fd59a135 277 Pfam PF01261 Xylose isomerase-like TIM barrel 79 228 1.3E-11 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS03020 11e5a2de3c62cd3125a294d4fd59a135 277 SUPERFAMILY SSF51658 41 274 3.45E-37 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS03020 11e5a2de3c62cd3125a294d4fd59a135 277 Gene3D G3DSA:3.20.20.150 34 273 1.1E-36 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 Pfam PF00297 Ribosomal protein L3 90 178 2.2E-13 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 PANTHER PTHR11229 1 204 3.8E-93 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 Gene3D G3DSA:4.10.960.10 79 157 1.2E-28 T 23-04-2016 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 8.0E-78 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 Gene3D G3DSA:2.40.30.10 3 32 6.4E-8 T 23-04-2016 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 Gene3D G3DSA:2.40.30.10 158 204 6.4E-8 T 23-04-2016 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 205 33.815 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23000 d6c0d53732a99fa30cdfda48e1c13acf 205 SUPERFAMILY SSF50447 1 204 3.36E-68 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS01335 2c43ca5823285262739ca9c4ca0f2f22 458 SUPERFAMILY SSF51126 61 438 2.46E-47 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS01335 2c43ca5823285262739ca9c4ca0f2f22 458 Gene3D G3DSA:2.160.20.10 61 441 3.3E-58 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS01335 2c43ca5823285262739ca9c4ca0f2f22 458 Pfam PF14592 Chondroitinase B 61 386 3.2E-26 T 23-04-2016 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 170 9.2E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 Gene3D G3DSA:2.170.130.10 43 171 9.0E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 Gene3D G3DSA:2.40.170.20 172 733 6.5E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 PANTHER PTHR32552 433 458 3.4E-28 T 23-04-2016 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 PANTHER PTHR32552 44 238 3.4E-28 T 23-04-2016 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 SUPERFAMILY SSF56935 622 733 2.38E-74 T 23-04-2016 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 SUPERFAMILY SSF56935 265 593 2.38E-74 T 23-04-2016 NIAKO_RS20460 f85c90116d327ad84e519c793513250e 733 SUPERFAMILY SSF56935 50 233 2.38E-74 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 Pfam PF07244 Surface antigen variable number repeat 130 206 5.9E-7 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 Pfam PF07244 Surface antigen variable number repeat 209 340 6.3E-9 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 Pfam PF07244 Surface antigen variable number repeat 432 506 6.6E-11 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 Pfam PF07244 Surface antigen variable number repeat 343 428 1.8E-9 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815 289 534 1.3E-95 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815 39 241 1.3E-95 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815 550 907 1.3E-95 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815:SF11 289 534 1.3E-95 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815:SF11 39 241 1.3E-95 T 23-04-2016 NIAKO_RS32445 99ac02fb23cc6bf6b20b5f3514050fcc 909 PANTHER PTHR12815:SF11 550 907 1.3E-95 T 23-04-2016 NIAKO_RS37440 b3c0d23a7c8f0214515f7a9c8dc7e48e 348 Pfam PF06580 Histidine kinase 164 241 1.5E-24 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS37440 b3c0d23a7c8f0214515f7a9c8dc7e48e 348 PANTHER PTHR34220 17 346 3.4E-46 T 23-04-2016 NIAKO_RS37440 b3c0d23a7c8f0214515f7a9c8dc7e48e 348 PANTHER PTHR34220:SF1 17 346 3.4E-46 T 23-04-2016 NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 PANTHER PTHR23200:SF41 1 279 1.5E-58 T 23-04-2016 NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 PANTHER PTHR23200 1 279 1.5E-58 T 23-04-2016 NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 Gene3D G3DSA:3.60.15.10 1 268 1.2E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 Pfam PF00753 Metallo-beta-lactamase superfamily 45 238 1.1E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 SMART SM00849 42 252 1.1E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS34140 4c5ca74c62fc1e8c1f98a5cc1bbc52a1 279 SUPERFAMILY SSF56281 1 270 2.75E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32110 bc5709e69dab3949924d0161803fa563 138 Gene3D G3DSA:3.40.1260.10 24 136 1.4E-26 T 23-04-2016 IPR027396 DsrEFH-like NIAKO_RS32110 bc5709e69dab3949924d0161803fa563 138 SUPERFAMILY SSF75169 24 135 3.73E-20 T 23-04-2016 IPR027396 DsrEFH-like NIAKO_RS32110 bc5709e69dab3949924d0161803fa563 138 Pfam PF02635 DsrE/DsrF-like family 26 135 8.3E-9 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 Gene3D G3DSA:3.40.50.620 1 139 6.0E-27 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 Gene3D G3DSA:3.40.50.620 149 277 7.1E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 Pfam PF00582 Universal stress protein family 1 139 3.9E-23 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 PRINTS PR01438 Universal stress protein signature 1 17 1.6E-9 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 PRINTS PR01438 Universal stress protein signature 117 139 1.6E-9 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 PRINTS PR01438 Universal stress protein signature 100 112 1.6E-9 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 SUPERFAMILY SSF52402 162 276 2.51E-9 T 23-04-2016 NIAKO_RS11390 d2f28b544c4df3179c382853c10ac449 288 SUPERFAMILY SSF52402 1 147 4.44E-26 T 23-04-2016 NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.1E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.1E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.1E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.1E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 SUPERFAMILY SSF51735 1 246 6.51E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 Gene3D G3DSA:3.40.50.720 2 246 2.1E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PANTHER PTHR24321:SF6 2 248 1.0E-48 T 23-04-2016 NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PANTHER PTHR24321 2 248 1.0E-48 T 23-04-2016 NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 2.1E-57 T 23-04-2016 NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.7E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23825 56c6dcfad6b14f868f7b4c3ca49dca36 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 4.7E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31985 450dab462c4d88af6fee0648dd603627 275 Gene3D G3DSA:3.20.20.370 29 247 9.6E-24 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS31985 450dab462c4d88af6fee0648dd603627 275 SUPERFAMILY SSF88713 37 203 8.06E-20 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS31985 450dab462c4d88af6fee0648dd603627 275 Pfam PF11959 Domain of unknown function (DUF3473) 125 245 5.5E-8 T 23-04-2016 IPR022560 Domain of unknown function DUF3473 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PANTHER PTHR23429 14 506 7.5E-209 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 497 80.275 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 197 495 6.8E-119 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 Gene3D G3DSA:3.40.50.720 10 194 9.5E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 185 191 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 496 1.8E-184 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PANTHER PTHR23429:SF0 14 506 7.5E-209 T 23-04-2016 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 Gene3D G3DSA:3.30.360.10 195 495 1.1E-121 T 23-04-2016 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 195 3.5E-59 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 SUPERFAMILY SSF51735 6 198 9.65E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 SUPERFAMILY SSF55347 185 496 5.89E-113 T 23-04-2016 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PIRSF PIRSF000110 1 499 2.1E-181 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 336 362 2.0E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 151 164 2.0E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 227 244 2.0E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 245 261 2.0E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS32000 2c7d8d47aecf6ce81d3ea600b0410e23 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 175 203 2.0E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NIAKO_RS30820 96f65409e218c69b8b71258ee43c2877 289 PANTHER PTHR12110:SF23 28 288 5.0E-62 T 23-04-2016 NIAKO_RS30820 96f65409e218c69b8b71258ee43c2877 289 SUPERFAMILY SSF51658 31 285 2.8E-47 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30820 96f65409e218c69b8b71258ee43c2877 289 Pfam PF01261 Xylose isomerase-like TIM barrel 51 244 4.7E-21 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30820 96f65409e218c69b8b71258ee43c2877 289 Gene3D G3DSA:3.20.20.150 29 287 2.0E-63 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30820 96f65409e218c69b8b71258ee43c2877 289 PANTHER PTHR12110 28 288 5.0E-62 T 23-04-2016 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 SUPERFAMILY SSF46689 8 58 8.51E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 SUPERFAMILY SSF46689 61 111 3.14E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 Pfam PF12833 Helix-turn-helix domain 31 109 8.0E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 1.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 1.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 Gene3D G3DSA:1.10.10.60 64 110 1.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 SMART SM00342 25 108 2.2E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 PANTHER PTHR11019 4 108 1.2E-26 T 23-04-2016 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 Gene3D G3DSA:1.10.10.60 7 63 9.2E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12915 339257c583adbbc98317ddd763c7f909 113 PANTHER PTHR11019:SF61 4 108 1.2E-26 T 23-04-2016 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 SUPERFAMILY SSF88946 15 97 4.32E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 Gene3D G3DSA:1.10.10.10 125 184 3.1E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 Gene3D G3DSA:1.10.1740.10 13 86 3.6E-16 T 23-04-2016 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 Pfam PF08281 Sigma-70, region 4 127 168 2.2E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 PANTHER PTHR30173 21 183 4.8E-33 T 23-04-2016 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 Pfam PF04542 Sigma-70 region 2 23 85 7.4E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 183 1.0E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33065 0c593c970d090a8a46c498557bac3b03 193 SUPERFAMILY SSF88659 98 183 1.16E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 23.592 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 Gene3D G3DSA:4.10.830.10 35 89 2.3E-28 T 23-04-2016 NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 SUPERFAMILY SSF57716 2 89 1.43E-30 T 23-04-2016 NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 PANTHER PTHR19836 1 89 8.6E-45 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22935 7f3870da4b355c75ef1240e56f8d8626 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 6.6E-27 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27770 a1fc68c8d149fb3d300698b3ca308500 320 Pfam PF10162 G8 domain 36 103 2.4E-6 T 23-04-2016 IPR019316 G8 domain NIAKO_RS27770 a1fc68c8d149fb3d300698b3ca308500 320 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 252 318 4.1E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 2.8E-62 T 23-04-2016 NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PANTHER PTHR24322:SF343 11 138 2.4E-51 T 23-04-2016 NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PANTHER PTHR24322:SF343 155 187 2.4E-51 T 23-04-2016 NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 SUPERFAMILY SSF51735 6 246 4.45E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PANTHER PTHR24322 11 138 2.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PANTHER PTHR24322 155 187 2.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.3E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0049 T 23-04-2016 NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS08060 e9cc684d24559c45909248c6e63e084e 246 Gene3D G3DSA:3.40.50.720 1 246 3.8E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 PANTHER PTHR24220 341 451 1.1E-162 T 23-04-2016 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 PANTHER PTHR24220 7 295 1.1E-162 T 23-04-2016 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 PANTHER PTHR24220:SF586 341 451 1.1E-162 T 23-04-2016 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 PANTHER PTHR24220:SF586 7 295 1.1E-162 T 23-04-2016 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Gene3D G3DSA:3.40.50.300 4 262 1.8E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Gene3D G3DSA:3.40.50.300 313 567 6.3E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Pfam PF00005 ABC transporter 26 189 2.2E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Pfam PF00005 ABC transporter 342 492 4.5E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 273 6.7E-7 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 546 571 0.24 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 SUPERFAMILY SSF52540 5 260 1.45E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 SUPERFAMILY SSF52540 318 565 1.55E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 SMART SM00382 34 239 6.3E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS24855 6159452b12c8d3aaf6ad24e2b63ea792 575 SMART SM00382 350 543 2.6E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27330 f3b266f3f5e89358f651ded017eaf559 281 PANTHER PTHR22916 21 218 6.4E-23 T 23-04-2016 NIAKO_RS27330 f3b266f3f5e89358f651ded017eaf559 281 PANTHER PTHR22916:SF28 21 218 6.4E-23 T 23-04-2016 NIAKO_RS27330 f3b266f3f5e89358f651ded017eaf559 281 Gene3D G3DSA:3.90.550.10 20 250 2.9E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27330 f3b266f3f5e89358f651ded017eaf559 281 Pfam PF00535 Glycosyl transferase family 2 21 152 3.5E-15 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS27330 f3b266f3f5e89358f651ded017eaf559 281 SUPERFAMILY SSF53448 18 262 4.69E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS00135 abd5fb5b886fb9d33b5314e9939576e6 357 PANTHER PTHR19353:SF14 13 357 4.1E-67 T 23-04-2016 NIAKO_RS00135 abd5fb5b886fb9d33b5314e9939576e6 357 PIRSF PIRSF015921 3 357 1.3E-65 T 23-04-2016 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 NIAKO_RS00135 abd5fb5b886fb9d33b5314e9939576e6 357 Pfam PF00487 Fatty acid desaturase 62 336 2.7E-39 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS00135 abd5fb5b886fb9d33b5314e9939576e6 357 PANTHER PTHR19353 13 357 4.1E-67 T 23-04-2016 NIAKO_RS17850 e44e809e66113e8356b90b3f3f2ddec1 281 PANTHER PTHR21240 1 281 8.4E-52 T 23-04-2016 NIAKO_RS17850 e44e809e66113e8356b90b3f3f2ddec1 281 Pfam PF04909 Amidohydrolase 4 281 6.3E-35 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS17850 e44e809e66113e8356b90b3f3f2ddec1 281 Gene3D G3DSA:3.20.20.140 1 281 7.3E-58 T 23-04-2016 NIAKO_RS17850 e44e809e66113e8356b90b3f3f2ddec1 281 PANTHER PTHR21240:SF1 1 281 8.4E-52 T 23-04-2016 NIAKO_RS17850 e44e809e66113e8356b90b3f3f2ddec1 281 SUPERFAMILY SSF51556 2 281 4.97E-54 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 PANTHER PTHR23024 24 159 2.4E-44 T 23-04-2016 NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 SUPERFAMILY SSF53474 19 157 3.94E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 Gene3D G3DSA:3.40.50.1820 17 159 7.4E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 Pfam PF07859 alpha/beta hydrolase fold 43 155 7.1E-35 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 PANTHER PTHR23024:SF128 24 159 2.4E-44 T 23-04-2016 NIAKO_RS24040 2f7c5d47c1816f6cec5df3a4f656db6f 159 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 42 58 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 SMART SM00448 2 115 1.3E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 SUPERFAMILY SSF52172 1 131 5.69E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 Gene3D G3DSA:3.40.50.2300 1 125 3.3E-31 T 23-04-2016 NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 PANTHER PTHR26402 2 133 5.6E-35 T 23-04-2016 NIAKO_RS18110 a564bb3bb0279c882e554fce8bf8b157 135 PANTHER PTHR26402:SF506 2 133 5.6E-35 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 675 1142 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 22 210 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 465 502 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 611 653 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 371 429 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532:SF57 230 346 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 675 1142 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 22 210 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 465 502 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 611 653 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 371 429 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 PANTHER PTHR11532 230 346 5.5E-175 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 Gene3D G3DSA:2.170.130.10 131 266 1.3E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF49464 44 126 1.2E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 Gene3D G3DSA:2.60.40.1120 46 130 5.0E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 Pfam PF13715 CarboxypepD_reg-like domain 46 128 1.0E-17 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 263 9.9E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 239 269 2.7E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 45 1144 5.4E-183 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF56935 508 569 3.34E-62 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF56935 601 893 3.34E-62 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF56935 954 1000 3.34E-62 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF56935 375 463 3.34E-62 T 23-04-2016 NIAKO_RS20090 4cb8cbcb246f30d8d675d6d66d9631ae 1144 SUPERFAMILY SSF56935 124 289 3.34E-62 T 23-04-2016 NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 PIRSF PIRSF016838 1 309 1.5E-25 T 23-04-2016 IPR028349 Protein PafC NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 Pfam PF13280 WYL domain 139 308 6.0E-34 T 23-04-2016 IPR026881 WYL domain NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 PANTHER PTHR34580 1 315 3.5E-59 T 23-04-2016 NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 PANTHER PTHR34580:SF3 1 315 3.5E-59 T 23-04-2016 NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 Gene3D G3DSA:1.10.10.10 4 63 1.7E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 SUPERFAMILY SSF46785 3 61 7.39E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32905 907c24092e3445f8715cbba817f4406e 317 Pfam PF08279 HTH domain 6 58 3.5E-16 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 Gene3D G3DSA:3.40.30.10 16 105 3.6E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 PANTHER PTHR41709 20 106 1.1E-42 T 23-04-2016 NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 Pfam PF07689 KaiB domain 23 103 2.4E-23 T 23-04-2016 IPR011649 KaiB domain GO:0048511 NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 SMART SM01248 23 104 1.8E-44 T 23-04-2016 IPR011649 KaiB domain GO:0048511 NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 SUPERFAMILY SSF52833 15 104 2.61E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15635 f743b5cff72974c70626c3ebc519310d 109 PANTHER PTHR41709:SF1 20 106 1.1E-42 T 23-04-2016 NIAKO_RS01660 2686613d66f90fff6710dec7d8d5530f 127 PIRSF PIRSF022536 1 127 2.6E-34 T 23-04-2016 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 NIAKO_RS01660 2686613d66f90fff6710dec7d8d5530f 127 SMART SM00317 4 119 9.1E-11 T 23-04-2016 IPR001214 SET domain GO:0005515 NIAKO_RS01660 2686613d66f90fff6710dec7d8d5530f 127 SUPERFAMILY SSF82199 2 124 8.63E-23 T 23-04-2016 NIAKO_RS01660 2686613d66f90fff6710dec7d8d5530f 127 Pfam PF00856 SET domain 15 113 6.7E-14 T 23-04-2016 IPR001214 SET domain GO:0005515 NIAKO_RS01660 2686613d66f90fff6710dec7d8d5530f 127 Gene3D G3DSA:2.170.270.10 8 122 6.7E-21 T 23-04-2016 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 SUPERFAMILY SSF51351 1 251 1.03E-85 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 Pfam PF00121 Triosephosphate isomerase 5 249 7.1E-86 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 242 3.3E-56 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 252 37.165 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 Gene3D G3DSA:3.20.20.70 1 251 2.5E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS10690 6d82a20bbab3611a6e77f358f6e77a7d 253 PANTHER PTHR21139 1 252 2.6E-111 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NIAKO_RS20555 4fe49d841da977db7b1d082bbe18fa70 586 Pfam PF07980 SusD family 289 585 2.5E-44 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20555 4fe49d841da977db7b1d082bbe18fa70 586 Pfam PF14322 Starch-binding associating with outer membrane 21 209 2.4E-7 T 23-04-2016 NIAKO_RS20555 4fe49d841da977db7b1d082bbe18fa70 586 SUPERFAMILY SSF48452 16 503 9.74E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20555 4fe49d841da977db7b1d082bbe18fa70 586 SUPERFAMILY SSF48452 553 585 9.74E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20555 4fe49d841da977db7b1d082bbe18fa70 586 Gene3D G3DSA:1.25.40.10 190 472 1.9E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 983 2.3E-162 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Pfam PF13715 CarboxypepD_reg-like domain 25 107 8.7E-17 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 251 5.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Pfam PF00593 TonB dependent receptor 617 980 2.1E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 227 257 8.5E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Gene3D G3DSA:2.40.170.20 326 779 1.4E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Gene3D G3DSA:2.40.170.20 826 983 1.4E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Gene3D G3DSA:2.40.170.20 253 277 1.4E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Gene3D G3DSA:2.170.130.10 109 252 1.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 Gene3D G3DSA:2.60.40.1120 25 108 2.1E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF56935 438 772 2.11E-80 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF56935 317 405 2.11E-80 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF56935 892 959 2.11E-80 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF56935 103 275 2.11E-80 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF56935 818 861 2.11E-80 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 SUPERFAMILY SSF49464 23 105 2.22E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532 218 371 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532 500 527 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532 7 191 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532 419 461 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532 569 981 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532:SF57 218 371 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532:SF57 500 527 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532:SF57 7 191 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532:SF57 419 461 8.9E-124 T 23-04-2016 NIAKO_RS13655 d6988fa3c11a80d5b0f48fe1835aab30 983 PANTHER PTHR11532:SF57 569 981 8.9E-124 T 23-04-2016 NIAKO_RS09230 c4c7b08699468f483a29b29c6d388aa4 260 Pfam PF02405 Permease MlaE 44 254 1.6E-65 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS09230 c4c7b08699468f483a29b29c6d388aa4 260 PANTHER PTHR30188 12 255 9.8E-72 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Gene3D G3DSA:1.25.40.10 226 353 2.6E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Gene3D G3DSA:1.25.40.10 74 225 2.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SUPERFAMILY SSF48452 74 206 7.4E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SUPERFAMILY SSF55874 477 643 6.42E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00387 534 645 8.8E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 PANTHER PTHR24423 1 8 1.7E-42 T 23-04-2016 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 PANTHER PTHR24423 420 642 1.7E-42 T 23-04-2016 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SUPERFAMILY SSF47384 414 483 1.55E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SUPERFAMILY SSF48452 178 321 1.99E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Pfam PF13424 Tetratricopeptide repeat 91 157 8.8E-10 T 23-04-2016 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 642 5.1E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00388 422 488 5.1E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Gene3D G3DSA:3.30.565.10 497 644 3.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 Gene3D G3DSA:1.10.287.130 418 481 3.4E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00028 90 123 4.4E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00028 251 284 120.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00028 171 204 5.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 SMART SM00028 291 324 140.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 4.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 4.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS16090 f405477055d57249c6f29bc8f2d24c6b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 585 4.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF81653 114 223 7.72E-29 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 325 331 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 81 343 6.3E-43 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 570 690 5.2E-37 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 507 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 528 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 618 8.8E-40 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Gene3D G3DSA:2.70.150.10 19 54 5.2E-42 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Gene3D G3DSA:2.70.150.10 108 223 5.2E-42 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Gene3D G3DSA:3.40.1110.10 314 503 1.3E-46 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PANTHER PTHR24093 1 861 0.0 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF56784 321 341 1.13E-63 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF56784 451 703 1.13E-63 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Gene3D G3DSA:1.20.1110.10 55 107 4.2E-122 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Gene3D G3DSA:1.20.1110.10 568 856 4.2E-122 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 70 2.3E-23 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF81660 330 500 1.37E-35 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 613 6.0E-26 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Pfam PF00122 E1-E2 ATPase 80 314 2.6E-66 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SMART SM00831 2 75 2.6E-31 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PANTHER PTHR24093:SF268 1 861 0.0 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 631 656 2.8E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 454 472 2.8E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 571 587 2.8E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 2.8E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 10 845 1.1E-152 T 23-04-2016 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 Pfam PF00689 Cation transporting ATPase, C-terminus 683 853 1.4E-49 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF81665 649 856 4.84E-139 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF81665 223 317 4.84E-139 T 23-04-2016 NIAKO_RS17540 59d31a41512c6dfd92f09401cd3e395b 861 SUPERFAMILY SSF81665 1 113 4.84E-139 T 23-04-2016 NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 31.983 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 Pfam PF00436 Single-strand binding protein family 4 106 5.2E-35 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 Gene3D G3DSA:2.40.50.140 1 149 2.7E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 PANTHER PTHR10302 1 148 1.1E-42 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 SUPERFAMILY SSF50249 2 149 1.13E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS28510 cad78eb4e10c272303e3ecfba6bc37f9 149 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 124 2.9E-41 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF49464 11 83 1.07E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 213 6.9E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.40.170.20 218 291 3.8E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.40.170.20 705 962 3.8E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.40.170.20 447 671 3.8E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.40.170.20 357 396 3.8E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.60.40.1120 12 93 3.0E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF56935 730 775 1.89E-66 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF56935 510 668 1.89E-66 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF56935 83 283 1.89E-66 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF56935 814 958 1.89E-66 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 SUPERFAMILY SSF56935 358 473 1.89E-66 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Gene3D G3DSA:2.170.130.10 94 217 8.8E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 Pfam PF13715 CarboxypepD_reg-like domain 12 96 1.7E-15 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 PANTHER PTHR30069:SF11 1 229 2.5E-23 T 23-04-2016 NIAKO_RS34380 a32f6322ffd0ad552394b07909224c13 968 PANTHER PTHR30069 1 229 2.5E-23 T 23-04-2016 NIAKO_RS10635 278944cb289284424fe78d6d56bbfd49 463 SUPERFAMILY SSF52266 235 415 1.37E-70 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS10635 278944cb289284424fe78d6d56bbfd49 463 SUPERFAMILY SSF52266 105 208 1.37E-70 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS10635 278944cb289284424fe78d6d56bbfd49 463 PANTHER PTHR22901 1 463 2.2E-140 T 23-04-2016 NIAKO_RS10635 278944cb289284424fe78d6d56bbfd49 463 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 106 355 6.0E-84 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS10635 278944cb289284424fe78d6d56bbfd49 463 PANTHER PTHR22901:SF0 1 463 2.2E-140 T 23-04-2016 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 PIRSF PIRSF007663 8 817 2.2E-287 T 23-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 SUPERFAMILY SSF48208 286 783 4.56E-96 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 PANTHER PTHR31084:SF0 19 786 0.0 T 23-04-2016 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 Gene3D G3DSA:2.70.98.50 26 416 1.4E-146 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 27 274 3.6E-73 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS26410 4c53d8cff47336f7ce94acb4ad9c77a3 850 PANTHER PTHR31084 19 786 0.0 T 23-04-2016 NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.227 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 5.2E-55 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 PANTHER PTHR10472 2 149 4.7E-67 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 Gene3D G3DSA:3.50.80.10 1 146 1.2E-55 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 SUPERFAMILY SSF69500 1 146 3.53E-53 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain NIAKO_RS27825 61fbdca82e853dbb95242011bc1c03b9 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 4.0E-52 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 Pfam PF00027 Cyclic nucleotide-binding domain 28 115 4.3E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 PANTHER PTHR24567 9 212 7.5E-27 T 23-04-2016 NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 Gene3D G3DSA:1.10.10.10 148 211 8.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 Pfam PF13545 Crp-like helix-turn-helix domain 149 212 9.6E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 SUPERFAMILY SSF51206 8 144 2.62E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 Gene3D G3DSA:2.60.120.10 8 144 9.2E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS04110 5cdd29e3d19d4b257079ea9978fd3a54 215 SUPERFAMILY SSF46785 143 212 6.07E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11485 bbe1152d00f11aa8e2c7349131d4bd8b 317 Gene3D G3DSA:3.40.50.150 102 262 2.3E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS11485 bbe1152d00f11aa8e2c7349131d4bd8b 317 Pfam PF05050 Methyltransferase FkbM domain 119 259 3.5E-14 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS11485 bbe1152d00f11aa8e2c7349131d4bd8b 317 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 119 255 8.8E-24 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS11485 bbe1152d00f11aa8e2c7349131d4bd8b 317 SUPERFAMILY SSF53335 62 280 1.08E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS11660 4e000d08295b00ca87eb6f8b11770b07 517 SUPERFAMILY SSF48452 19 516 1.77E-75 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11660 4e000d08295b00ca87eb6f8b11770b07 517 Pfam PF14322 Starch-binding associating with outer membrane 117 248 2.8E-27 T 23-04-2016 NIAKO_RS11660 4e000d08295b00ca87eb6f8b11770b07 517 Pfam PF07980 SusD family 363 516 5.8E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11660 4e000d08295b00ca87eb6f8b11770b07 517 Gene3D G3DSA:1.25.40.10 230 456 8.1E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 SUPERFAMILY SSF56954 7 476 1.14E-85 T 23-04-2016 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 Gene3D G3DSA:1.20.1600.10 52 476 1.6E-95 T 23-04-2016 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 PANTHER PTHR30203:SF3 48 477 8.7E-118 T 23-04-2016 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 PANTHER PTHR30203 48 477 8.7E-118 T 23-04-2016 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 475 1.5E-75 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 Pfam PF02321 Outer membrane efflux protein 291 473 2.0E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS35205 bbd6685e374b108b5f036e3d41b836de 477 Pfam PF02321 Outer membrane efflux protein 64 264 1.4E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS10730 5294f20113f2b27338ff4fd417e2316d 137 PANTHER PTHR40052:SF2 1 137 3.1E-52 T 23-04-2016 NIAKO_RS10730 5294f20113f2b27338ff4fd417e2316d 137 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 2 137 2.0E-59 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family NIAKO_RS10730 5294f20113f2b27338ff4fd417e2316d 137 Pfam PF06491 Disulphide isomerase 2 137 3.3E-60 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family NIAKO_RS10730 5294f20113f2b27338ff4fd417e2316d 137 PANTHER PTHR40052 1 137 3.1E-52 T 23-04-2016 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 Gene3D G3DSA:1.10.10.10 5 106 3.3E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 PANTHER PTHR33154 6 96 3.0E-19 T 23-04-2016 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.0E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.0E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.0E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 SMART SM00418 6 84 1.4E-22 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 SUPERFAMILY SSF46785 6 96 7.1E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12155 9c625e805fd07c40fb72404f1bcea89d 108 Pfam PF12840 Helix-turn-helix domain 6 64 7.5E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 Gene3D G3DSA:1.10.10.60 276 319 1.3E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 Gene3D G3DSA:1.10.10.60 217 275 1.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 SMART SM00342 238 321 5.4E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 PANTHER PTHR11019:SF61 220 326 3.1E-26 T 23-04-2016 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 PANTHER PTHR11019 220 326 3.1E-26 T 23-04-2016 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 SUPERFAMILY SSF46689 275 322 2.69E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36985 3b4b354b327a0a68a71782dbb607b23c 326 Pfam PF12833 Helix-turn-helix domain 246 319 2.6E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 SUPERFAMILY SSF51735 104 297 1.35E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 SUPERFAMILY SSF50129 1 137 5.74E-16 T 23-04-2016 IPR011032 GroES-like NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 Pfam PF00107 Zinc-binding dehydrogenase 145 267 8.5E-10 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 Gene3D G3DSA:3.40.50.720 137 259 9.2E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 PANTHER PTHR11695:SF607 13 323 8.4E-65 T 23-04-2016 NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 PANTHER PTHR11695 13 323 8.4E-65 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 Gene3D G3DSA:3.90.180.10 1 136 1.5E-19 T 23-04-2016 IPR011032 GroES-like NIAKO_RS00455 86d37403d9093c3acc8e0c2a818ca68e 323 SMART SM00829 11 293 1.8E-7 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 SUPERFAMILY SSF51182 154 253 1.43E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 SUPERFAMILY SSF51182 32 132 5.28E-10 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 Pfam PF07883 Cupin domain 184 249 3.0E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 Gene3D G3DSA:2.60.120.10 41 128 4.9E-12 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 Gene3D G3DSA:2.60.120.10 161 253 6.3E-20 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS17360 6832986ad29a75a28efc6b2e640d034e 254 Pfam PF02311 AraC-like ligand binding domain 71 142 1.3E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 PANTHER PTHR30363 1 254 2.0E-72 T 23-04-2016 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 PANTHER PTHR30363:SF1 1 254 2.0E-72 T 23-04-2016 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 SMART SM00420 6 58 1.3E-12 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 SUPERFAMILY SSF46785 3 69 2.07E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 Gene3D G3DSA:1.10.10.10 1 56 1.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 Pfam PF00455 DeoR C terminal sensor domain 75 232 8.2E-45 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 SMART SM01134 73 234 5.5E-59 T 23-04-2016 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.6E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 Gene3D G3DSA:3.40.50.1360 77 215 1.3E-14 T 23-04-2016 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 SUPERFAMILY SSF100950 75 236 2.3E-29 T 23-04-2016 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS17305 69aac982fe0c131d81cbb07356bdc90a 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS04590 23a236d5e1f9fa931f6a00a45de706f0 312 PANTHER PTHR21624 10 279 6.1E-69 T 23-04-2016 NIAKO_RS04590 23a236d5e1f9fa931f6a00a45de706f0 312 Pfam PF04116 Fatty acid hydroxylase superfamily 84 217 1.7E-26 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 Gene3D G3DSA:1.25.40.10 209 361 1.3E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 Gene3D G3DSA:1.25.40.10 456 539 1.3E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 Pfam PF14322 Starch-binding associating with outer membrane 50 229 1.1E-20 T 23-04-2016 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 SUPERFAMILY SSF48452 266 566 1.06E-113 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 SUPERFAMILY SSF48452 21 235 1.06E-113 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 SUPERFAMILY SSF48452 607 639 1.06E-113 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11685 ff312432ea31aa963975766568e0352f 639 Pfam PF07980 SusD family 314 639 2.5E-52 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06035 8c650f5fc871153c73a621c0d04adcf8 249 PANTHER PTHR10434 14 244 6.4E-41 T 23-04-2016 NIAKO_RS06035 8c650f5fc871153c73a621c0d04adcf8 249 Pfam PF01553 Acyltransferase 66 189 1.1E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS06035 8c650f5fc871153c73a621c0d04adcf8 249 SUPERFAMILY SSF69593 18 242 4.71E-35 T 23-04-2016 NIAKO_RS06035 8c650f5fc871153c73a621c0d04adcf8 249 SMART SM00563 80 194 7.5E-19 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS06035 8c650f5fc871153c73a621c0d04adcf8 249 Gene3D G3DSA:3.40.1130.10 71 244 2.3E-18 T 23-04-2016 NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.6E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 SMART SM00345 13 72 1.4E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 PANTHER PTHR38445:SF2 3 121 6.9E-26 T 23-04-2016 NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 Gene3D G3DSA:1.10.10.10 4 72 2.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 SUPERFAMILY SSF46785 6 76 8.86E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23910 c3d20f3906f2e6ed9accf9455932b5d0 127 PANTHER PTHR38445 3 121 6.9E-26 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 Gene3D G3DSA:3.40.50.300 10 184 5.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 393 413 1.8E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 376 393 1.8E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 Gene3D G3DSA:1.10.8.60 185 259 5.7E-23 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PANTHER PTHR32071 7 263 3.4E-141 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PANTHER PTHR32071 320 412 3.4E-141 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 SMART SM00382 32 175 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 36 49 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 Pfam PF02954 Bacterial regulatory protein, Fis family 374 410 2.0E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 225 234 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PANTHER PTHR32071:SF23 7 263 3.4E-141 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 PANTHER PTHR32071:SF23 320 412 3.4E-141 T 23-04-2016 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 SUPERFAMILY SSF46689 370 412 5.02E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 SUPERFAMILY SSF52540 11 255 2.48E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 Pfam PF00158 Sigma-54 interaction domain 12 178 4.7E-64 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS05865 42792311b2ad272121eae0e9d35c969a 414 Gene3D G3DSA:1.10.10.60 360 413 5.9E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 SUPERFAMILY SSF51735 166 332 1.44E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 Gene3D G3DSA:3.40.50.720 208 228 6.3E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 Gene3D G3DSA:3.40.50.1770 229 369 1.9E-16 T 23-04-2016 NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 33 166 3.2E-33 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 SMART SM01003 33 166 8.8E-42 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 PANTHER PTHR10160 29 395 5.2E-88 T 23-04-2016 NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 SMART SM01002 178 326 7.6E-50 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 Gene3D G3DSA:3.40.50.1770 31 207 4.3E-48 T 23-04-2016 NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 172 382 2.5E-59 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 SUPERFAMILY SSF52283 31 166 1.02E-38 T 23-04-2016 NIAKO_RS34240 b4828620ca0431a3e738f1465cd0d98d 404 SUPERFAMILY SSF52283 334 387 1.02E-38 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PRINTS PR01166 Cytochrome c oxidase subunit II signature 128 140 6.2E-7 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PRINTS PR01166 Cytochrome c oxidase subunit II signature 255 275 6.2E-7 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PRINTS PR01166 Cytochrome c oxidase subunit II signature 163 182 6.2E-7 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 SUPERFAMILY SSF49503 163 337 6.49E-29 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 Gene3D G3DSA:1.10.287.90 75 156 2.8E-15 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 72 147 7.0E-8 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PANTHER PTHR22888 27 192 3.2E-43 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PANTHER PTHR22888 214 345 3.2E-43 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 171 317 3.1E-6 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 SUPERFAMILY SSF81464 69 157 1.59E-13 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PANTHER PTHR22888:SF2 27 192 3.2E-43 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 PANTHER PTHR22888:SF2 214 345 3.2E-43 T 23-04-2016 NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 Gene3D G3DSA:2.60.40.420 161 186 1.0E-30 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS31855 31b708b93b1dce84ae6ada7c11e63024 368 Gene3D G3DSA:2.60.40.420 233 341 1.0E-30 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PANTHER PTHR22762 326 674 9.8E-65 T 23-04-2016 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 Pfam PF02065 Melibiase 288 627 2.0E-102 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 641 725 2.2E-12 T 23-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 49 283 1.1E-53 T 23-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 SUPERFAMILY SSF51445 324 657 4.21E-82 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 Gene3D G3DSA:3.20.20.70 326 610 3.7E-36 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 ProSitePatterns PS00512 Alpha-galactosidase signature. 355 373 - T 23-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 407 429 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 354 369 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 290 310 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 326 340 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 466 481 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 543 559 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 239 254 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 518 534 2.9E-39 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PIRSF PIRSF005536 23 729 1.9E-199 T 23-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 NIAKO_RS07245 1ba8d4397609d0475e7d8c4eb8e42307 731 PANTHER PTHR22762:SF81 326 674 9.8E-65 T 23-04-2016 NIAKO_RS05545 7d4d4be528147850df853ee143261b39 128 SUPERFAMILY SSF52172 6 123 3.56E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS05545 7d4d4be528147850df853ee143261b39 128 PANTHER PTHR26402 6 124 2.2E-31 T 23-04-2016 NIAKO_RS05545 7d4d4be528147850df853ee143261b39 128 Pfam PF00072 Response regulator receiver domain 8 119 1.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05545 7d4d4be528147850df853ee143261b39 128 SMART SM00448 6 119 1.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05545 7d4d4be528147850df853ee143261b39 128 Gene3D G3DSA:3.40.50.2300 6 122 3.6E-29 T 23-04-2016 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 339 7.7E-26 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 PANTHER PTHR12428 357 608 1.1E-47 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 Pfam PF02096 60Kd inner membrane protein 369 561 1.3E-47 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 Pfam PF14849 YidC periplasmic domain 83 349 9.4E-23 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 569 14.115 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 PRINTS PR00701 60kDa inner membrane protein signature 251 266 2.9E-12 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 PRINTS PR00701 60kDa inner membrane protein signature 87 108 2.9E-12 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 PRINTS PR00701 60kDa inner membrane protein signature 429 452 2.9E-12 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 367 561 1.8E-51 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NIAKO_RS23125 57dfb5639e7816a0ca8be7201d5c9594 609 PANTHER PTHR12428:SF14 357 608 1.1E-47 T 23-04-2016 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 SUPERFAMILY SSF56317 209 299 1.15E-55 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 SUPERFAMILY SSF56317 1 175 1.15E-55 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 PANTHER PTHR23088 214 302 4.1E-50 T 23-04-2016 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 PANTHER PTHR23088 1 182 4.1E-50 T 23-04-2016 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 Gene3D G3DSA:3.60.110.10 2 300 3.8E-62 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS19165 87f51511973ecc9869752baa5a9a1ed1 315 Pfam PF00795 Carbon-nitrogen hydrolase 5 281 3.0E-39 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 Pfam PF08281 Sigma-70, region 4 103 155 3.4E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 SUPERFAMILY SSF88659 97 160 6.73E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 158 5.2E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 Gene3D G3DSA:1.10.1740.10 4 72 1.8E-14 T 23-04-2016 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 Pfam PF04542 Sigma-70 region 2 7 70 1.4E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 PANTHER PTHR30173 2 167 3.8E-24 T 23-04-2016 NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 Gene3D G3DSA:1.10.10.10 98 161 5.8E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02030 f339f4ea839acba04b952bb6980c3f1e 171 SUPERFAMILY SSF88946 3 77 2.0E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Gene3D G3DSA:3.90.190.20 332 475 5.7E-51 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 32.458 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Gene3D G3DSA:3.40.1190.10 100 328 5.2E-66 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 SUPERFAMILY SSF53244 327 482 3.97E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 PANTHER PTHR23135 10 483 4.9E-174 T 23-04-2016 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Pfam PF01225 Mur ligase family, catalytic domain 26 96 1.4E-7 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 482 4.2E-149 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Pfam PF08245 Mur ligase middle domain 109 304 1.8E-44 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 412 1.6E-16 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 PANTHER PTHR23135:SF4 10 483 4.9E-174 T 23-04-2016 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 SUPERFAMILY SSF53623 100 324 6.15E-66 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 SUPERFAMILY SSF63418 2 100 1.83E-20 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36005 68d9ac4da7aa5d498ef65ce9e0480bf3 487 Gene3D G3DSA:3.40.1390.10 5 99 3.0E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS11835 1c6ea78c81456bf61fd558fd5b8c5e50 457 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS11835 1c6ea78c81456bf61fd558fd5b8c5e50 457 Gene3D G3DSA:3.40.30.10 33 149 3.6E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11835 1c6ea78c81456bf61fd558fd5b8c5e50 457 Pfam PF03190 Protein of unknown function, DUF255 29 131 1.0E-11 T 23-04-2016 IPR004879 Domain of unknown function DUF255 NIAKO_RS11835 1c6ea78c81456bf61fd558fd5b8c5e50 457 SUPERFAMILY SSF52833 30 151 4.65E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS21490 98d0c5f32e3cb9898bc6f34c60b5da53 378 PANTHER PTHR22935 86 376 3.4E-47 T 23-04-2016 NIAKO_RS21490 98d0c5f32e3cb9898bc6f34c60b5da53 378 Pfam PF00144 Beta-lactamase 83 358 2.8E-28 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS21490 98d0c5f32e3cb9898bc6f34c60b5da53 378 PANTHER PTHR22935:SF2 86 376 3.4E-47 T 23-04-2016 NIAKO_RS21490 98d0c5f32e3cb9898bc6f34c60b5da53 378 Gene3D G3DSA:3.40.710.10 84 358 7.7E-47 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS21490 98d0c5f32e3cb9898bc6f34c60b5da53 378 SUPERFAMILY SSF56601 9 355 6.12E-77 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 PANTHER PTHR11203:SF11 1 467 3.0E-106 T 23-04-2016 NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 PANTHER PTHR11203 1 467 3.0E-106 T 23-04-2016 NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 Pfam PF10996 Beta-Casp domain 255 380 3.0E-23 T 23-04-2016 IPR022712 Beta-Casp domain NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 Gene3D G3DSA:3.60.15.10 137 263 1.9E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 Gene3D G3DSA:3.60.15.10 1 101 1.9E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 Pfam PF00753 Metallo-beta-lactamase superfamily 22 85 2.6E-8 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 395 458 1.7E-10 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 SMART SM01027 255 380 3.2E-48 T 23-04-2016 IPR022712 Beta-Casp domain NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 SMART SM00849 13 233 3.6E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25895 0cb8a23d672e75286fbf22a2a839713d 467 SUPERFAMILY SSF56281 1 459 9.43E-113 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Hamap MF_01973 Lon protease [lon]. 39 800 65.309 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 TIGRFAM TIGR00763 lon: endopeptidase La 40 799 1.2E-273 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Gene3D G3DSA:3.30.230.10 620 799 6.8E-67 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 599 799 6.9E-81 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PIRSF PIRSF001174 23 800 2.9E-289 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 704 712 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 SUPERFAMILY SSF52540 334 587 1.89E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PANTHER PTHR10046:SF24 6 799 0.0 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PANTHER PTHR10046 6 799 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 SUPERFAMILY SSF88697 38 230 1.76E-49 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 38 231 3.1E-42 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 SMART SM00464 38 231 1.0E-55 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Gene3D G3DSA:3.40.50.300 334 531 2.1E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Gene3D G3DSA:1.10.8.60 532 612 3.6E-26 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 380 517 2.2E-22 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 SUPERFAMILY SSF54211 623 798 9.48E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 SMART SM00382 376 520 1.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 754 772 1.9E-48 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 623 639 1.9E-48 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 1.9E-48 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 750 1.9E-48 T 23-04-2016 NIAKO_RS18120 8e1d2322e9612bf72ab683a39d400922 800 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 384 403 1.9E-48 T 23-04-2016 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 PANTHER PTHR11918:SF64 1 392 2.4E-80 T 23-04-2016 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 Pfam PF04055 Radical SAM superfamily 202 362 2.7E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 SUPERFAMILY SSF102114 168 407 2.35E-43 T 23-04-2016 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 Pfam PF02310 B12 binding domain 24 132 3.3E-13 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 PANTHER PTHR11918 1 392 2.4E-80 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 Gene3D G3DSA:3.80.30.20 199 390 2.3E-41 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 SUPERFAMILY SSF52242 27 124 6.87E-7 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS21280 0fd5e4904d6973457bd433411f6ac5e0 468 SMART SM00729 198 407 1.1E-28 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 PIRSF PIRSF000538 1 492 2.0E-96 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 SUPERFAMILY SSF53067 253 485 1.64E-35 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 PANTHER PTHR10196:SF67 2 486 2.0E-131 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 Gene3D G3DSA:3.30.420.40 252 488 1.2E-26 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 SUPERFAMILY SSF53067 3 251 1.54E-58 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 1.9E-6 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 PANTHER PTHR10196 2 486 2.0E-131 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 Gene3D G3DSA:3.30.420.40 2 245 3.0E-57 T 23-04-2016 NIAKO_RS04720 a2ed2af939a93efb1539baa04a939480 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 245 3.9E-53 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 Pfam PF13538 UvrD-like helicase C-terminal domain 474 522 1.3E-6 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 SUPERFAMILY SSF52540 204 527 2.01E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 Pfam PF08378 Nuclease-related domain 13 121 4.5E-14 T 23-04-2016 IPR011528 Nuclease-related domain, NERD NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 Gene3D G3DSA:3.40.50.300 205 378 2.9E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 Gene3D G3DSA:3.40.50.300 379 527 4.9E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26675 241d7e5a78d1323182a7514e19b1a2ab 563 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 225 359 7.7E-8 T 23-04-2016 IPR018647 Domain of unknown function DUF2075 NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 PANTHER PTHR34218 31 726 8.9E-65 T 23-04-2016 NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 SUPERFAMILY SSF56235 25 159 7.72E-145 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 SUPERFAMILY SSF56235 192 723 7.72E-145 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 Gene3D G3DSA:3.60.20.10 345 543 4.0E-66 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 Gene3D G3DSA:3.60.20.10 177 270 4.0E-66 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 Pfam PF01804 Penicillin amidase 31 714 1.1E-121 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 Gene3D G3DSA:1.10.439.10 21 146 3.9E-32 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 NIAKO_RS31765 b390260da14a51dd16717b14bea38274 726 Gene3D G3DSA:2.30.120.10 271 334 4.1E-12 T 23-04-2016 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 PANTHER PTHR30270:SF0 3 344 6.8E-111 T 23-04-2016 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 PANTHER PTHR30270 3 344 6.8E-111 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 Gene3D G3DSA:3.90.650.10 156 342 1.3E-44 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 Gene3D G3DSA:3.30.1330.10 6 151 9.2E-45 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 12 342 1.1E-94 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 SUPERFAMILY SSF55326 8 149 1.96E-37 T 23-04-2016 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 11 339 28.198 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 149 5.9E-26 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 SUPERFAMILY SSF56042 153 322 3.59E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS31110 ab83619b4f9c169399496a2d5e76fd3b 344 PIRSF PIRSF005303 6 342 5.2E-101 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 SUPERFAMILY SSF48452 548 580 1.52E-91 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 SUPERFAMILY SSF48452 17 493 1.52E-91 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 Pfam PF07980 SusD family 289 580 3.0E-43 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 Gene3D G3DSA:1.25.40.10 358 467 5.7E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 Gene3D G3DSA:1.25.40.10 189 301 5.7E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29255 2752f6979d1f79908a5877e4aeb6544a 580 Pfam PF14322 Starch-binding associating with outer membrane 89 206 1.6E-9 T 23-04-2016 NIAKO_RS31910 f0db759a4a4a356d41f4006f166ad107 68 PANTHER PTHR21037 17 52 6.3E-15 T 23-04-2016 NIAKO_RS31910 f0db759a4a4a356d41f4006f166ad107 68 PANTHER PTHR21037:SF2 17 52 6.3E-15 T 23-04-2016 NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 Gene3D G3DSA:3.30.1320.10 3 82 6.9E-33 T 23-04-2016 IPR023803 Ribosomal protein S16 domain NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 SUPERFAMILY SSF54565 3 95 7.46E-34 T 23-04-2016 IPR023803 Ribosomal protein S16 domain NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.907 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.8E-31 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 Pfam PF00886 Ribosomal protein S16 9 67 1.5E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS34635 7a5707d3457a8d1b5d72c71c0c02b2f1 143 PANTHER PTHR12919 2 111 1.1E-40 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24950 ddce96b572ab07a0a21f92f92a8fd185 136 PANTHER PTHR12589 1 136 1.1E-45 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS24950 ddce96b572ab07a0a21f92f92a8fd185 136 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 135 1.7E-32 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS24950 ddce96b572ab07a0a21f92f92a8fd185 136 Gene3D G3DSA:3.30.479.10 1 135 5.9E-45 T 23-04-2016 NIAKO_RS24950 ddce96b572ab07a0a21f92f92a8fd185 136 PANTHER PTHR12589:SF1 1 136 1.1E-45 T 23-04-2016 NIAKO_RS24950 ddce96b572ab07a0a21f92f92a8fd185 136 SUPERFAMILY SSF55620 1 136 1.67E-43 T 23-04-2016 NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PANTHER PTHR24322 12 138 5.5E-69 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PANTHER PTHR24322 154 186 5.5E-69 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 SUPERFAMILY SSF51735 7 259 1.84E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PANTHER PTHR24322:SF25 12 138 5.5E-69 T 23-04-2016 NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 PANTHER PTHR24322:SF25 154 186 5.5E-69 T 23-04-2016 NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 Pfam PF00106 short chain dehydrogenase 8 190 1.9E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08825 0e3bd4fb26825bf7dfcae797b526b614 264 Gene3D G3DSA:3.40.50.720 2 260 1.7E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 SMART SM01004 2 323 2.0E-216 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 321 5.8E-145 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PANTHER PTHR11458 1 323 5.0E-173 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 1.5E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 SUPERFAMILY SSF51569 2 323 6.74E-138 T 23-04-2016 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 PIRSF PIRSF001415 1 324 4.1E-144 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28190 eb0c507a7c9efb8976428f993dd6fd8f 324 Gene3D G3DSA:3.20.20.70 2 323 2.8E-146 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Pfam PF13438 Domain of unknown function (DUF4113) 378 426 1.4E-18 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 PANTHER PTHR11076:SF40 1 426 3.4E-124 T 23-04-2016 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Pfam PF00817 impB/mucB/samB family 5 152 9.3E-33 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Gene3D G3DSA:3.30.70.270 67 160 2.7E-21 T 23-04-2016 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Pfam PF11799 impB/mucB/samB family C-terminal domain 247 361 2.6E-10 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Gene3D G3DSA:3.30.1490.100 251 361 7.3E-6 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 PANTHER PTHR11076 1 426 3.4E-124 T 23-04-2016 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 SUPERFAMILY SSF56672 3 239 1.42E-59 T 23-04-2016 NIAKO_RS33075 d7271cc9d5e384d2448ce565ced0c802 427 Gene3D G3DSA:1.10.150.20 172 239 2.7E-10 T 23-04-2016 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 128 469 6.2E-67 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 PANTHER PTHR11731 160 767 1.4E-213 T 23-04-2016 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 Gene3D G3DSA:2.140.10.30 49 495 2.8E-89 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 PANTHER PTHR11731:SF118 160 767 1.4E-213 T 23-04-2016 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 SUPERFAMILY SSF82171 50 498 4.19E-47 T 23-04-2016 NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 SUPERFAMILY SSF53474 502 755 1.68E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 Gene3D G3DSA:3.40.50.1820 501 755 3.0E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11420 2d9f4121cd99143d152508ad04ccd0fc 777 Pfam PF00326 Prolyl oligopeptidase family 557 755 6.7E-44 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS10915 622762e7b829849b07ccd53cc304e39b 360 Pfam PF00487 Fatty acid desaturase 66 338 3.5E-39 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS10915 622762e7b829849b07ccd53cc304e39b 360 PANTHER PTHR19353 8 360 4.0E-71 T 23-04-2016 NIAKO_RS10915 622762e7b829849b07ccd53cc304e39b 360 PIRSF PIRSF015921 3 360 1.6E-69 T 23-04-2016 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 NIAKO_RS10915 622762e7b829849b07ccd53cc304e39b 360 PANTHER PTHR19353:SF14 8 360 4.0E-71 T 23-04-2016 NIAKO_RS27170 a579edbc62d24a925a363b8baa693ce9 699 Pfam PF01435 Peptidase family M48 168 379 1.4E-11 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NIAKO_RS27170 a579edbc62d24a925a363b8baa693ce9 699 Gene3D G3DSA:3.30.2010.10 107 198 1.5E-7 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Pfam PF00593 TonB dependent receptor 749 1138 6.0E-15 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Pfam PF07660 Secretin and TonB N terminus short domain 67 118 5.4E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.170.130.10 227 364 2.5E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Pfam PF07715 TonB-dependent Receptor Plug Domain 231 364 2.6E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.40.170.20 460 919 1.7E-47 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.40.170.20 1046 1138 1.7E-47 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.40.170.20 979 1004 1.7E-47 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.40.170.20 365 384 1.7E-47 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532:SF57 331 554 2.3E-194 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532:SF57 648 1138 2.3E-194 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532:SF57 141 313 2.3E-194 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 340 370 9.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 142 1140 9.7E-228 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF49464 142 220 1.44E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Gene3D G3DSA:2.60.40.1120 143 226 9.4E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF56935 970 1014 1.01E-86 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF56935 1053 1139 1.01E-86 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF56935 451 539 1.01E-86 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF56935 217 388 1.01E-86 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SUPERFAMILY SSF56935 570 912 1.01E-86 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 Pfam PF13715 CarboxypepD_reg-like domain 143 223 4.1E-14 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 SMART SM00965 67 118 5.1E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532 331 554 2.3E-194 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532 648 1138 2.3E-194 T 23-04-2016 NIAKO_RS13300 b824a273653c72f951f7ca0fad7f460e 1140 PANTHER PTHR11532 141 313 2.3E-194 T 23-04-2016 NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 PANTHER PTHR23416:SF69 122 210 1.1E-41 T 23-04-2016 NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 PANTHER PTHR23416 122 210 1.1E-41 T 23-04-2016 NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 PANTHER PTHR23416 60 103 1.1E-41 T 23-04-2016 NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 166 1.7E-10 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 61 93 4.2E-6 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 SUPERFAMILY SSF51161 58 215 2.36E-46 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 Gene3D G3DSA:2.160.10.10 33 217 1.3E-51 T 23-04-2016 NIAKO_RS33235 02e90ff4075312a3521486794c44ae5a 227 PANTHER PTHR23416:SF69 60 103 1.1E-41 T 23-04-2016 NIAKO_RS27765 ad62d5aabca2c5dc431c4eebce461694 204 SUPERFAMILY SSF46785 10 120 2.07E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27765 ad62d5aabca2c5dc431c4eebce461694 204 SMART SM00347 34 136 7.1E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS27765 ad62d5aabca2c5dc431c4eebce461694 204 Gene3D G3DSA:1.10.10.10 15 128 2.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27765 ad62d5aabca2c5dc431c4eebce461694 204 Pfam PF13463 Winged helix DNA-binding domain 41 110 4.7E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 Pfam PF05762 VWA domain containing CoxE-like protein 144 356 9.9E-49 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 PANTHER PTHR30634:SF8 1 367 1.1E-147 T 23-04-2016 NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 SUPERFAMILY SSF53300 201 362 1.08E-24 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 SMART SM00327 200 359 4.8E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 PANTHER PTHR30634 1 367 1.1E-147 T 23-04-2016 NIAKO_RS28990 8b3d976efd4a2a564fb8c3118f7adf96 380 Gene3D G3DSA:3.40.50.410 201 320 3.0E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS04240 c03a37fb54d2d32a4885306a88efd565 191 PANTHER PTHR10204 1 167 2.1E-58 T 23-04-2016 NIAKO_RS04240 c03a37fb54d2d32a4885306a88efd565 191 PANTHER PTHR10204:SF40 1 167 2.1E-58 T 23-04-2016 NIAKO_RS04240 c03a37fb54d2d32a4885306a88efd565 191 Pfam PF02525 Flavodoxin-like fold 1 174 7.9E-51 T 23-04-2016 IPR003680 Flavodoxin-like fold NIAKO_RS04240 c03a37fb54d2d32a4885306a88efd565 191 SUPERFAMILY SSF52218 1 190 1.09E-53 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS04240 c03a37fb54d2d32a4885306a88efd565 191 Gene3D G3DSA:3.40.50.360 1 190 1.5E-54 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 Gene3D G3DSA:3.90.650.10 173 378 1.8E-37 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 378 7.1E-11 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 SUPERFAMILY SSF56042 173 377 2.24E-27 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 Gene3D G3DSA:3.30.1330.10 29 170 1.5E-13 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 PANTHER PTHR10520 32 232 3.2E-33 T 23-04-2016 NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 PANTHER PTHR10520 248 336 3.2E-33 T 23-04-2016 NIAKO_RS04410 c7c26fd67d35e4cb697fe202e97a328e 387 SUPERFAMILY SSF55326 29 170 9.77E-11 T 23-04-2016 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 PANTHER PTHR11019:SF50 53 304 1.7E-36 T 23-04-2016 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 SUPERFAMILY SSF51215 64 177 1.07E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 SMART SM00342 218 301 1.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 Pfam PF12833 Helix-turn-helix domain 224 302 2.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 PANTHER PTHR11019 53 304 1.7E-36 T 23-04-2016 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 Gene3D G3DSA:1.10.10.60 256 303 1.2E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15520 2bd5dd0cc3612d96136934da03921736 305 SUPERFAMILY SSF46689 256 304 2.91E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34925 8a7cb0dc7c5877596c1ae2af983aed70 1131 Pfam PF13480 Acetyltransferase (GNAT) domain 189 330 2.4E-16 T 23-04-2016 NIAKO_RS34925 8a7cb0dc7c5877596c1ae2af983aed70 1131 Pfam PF13480 Acetyltransferase (GNAT) domain 776 917 2.7E-11 T 23-04-2016 NIAKO_RS34925 8a7cb0dc7c5877596c1ae2af983aed70 1131 SUPERFAMILY SSF55729 189 335 4.87E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS34925 8a7cb0dc7c5877596c1ae2af983aed70 1131 SUPERFAMILY SSF55729 776 921 1.55E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 20 249 3.1E-70 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 226 5.9E-37 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 PANTHER PTHR21091:SF16 18 244 2.0E-50 T 23-04-2016 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 Gene3D G3DSA:3.40.1010.10 18 132 2.0E-33 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 PANTHER PTHR21091 18 244 2.0E-50 T 23-04-2016 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 Gene3D G3DSA:3.30.950.10 139 248 5.0E-27 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NIAKO_RS26170 00364c4e0204872fea8f4df8da49ded4 256 SUPERFAMILY SSF53790 19 248 2.62E-59 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS04545 a4deb8dc561422521a168746bae4c9e9 641 Gene3D G3DSA:3.40.50.150 66 253 1.2E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04545 a4deb8dc561422521a168746bae4c9e9 641 SUPERFAMILY SSF46966 557 628 1.58E-5 T 23-04-2016 NIAKO_RS04545 a4deb8dc561422521a168746bae4c9e9 641 Pfam PF13489 Methyltransferase domain 69 185 1.2E-8 T 23-04-2016 NIAKO_RS04545 a4deb8dc561422521a168746bae4c9e9 641 SUPERFAMILY SSF53335 71 257 3.11E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04545 a4deb8dc561422521a168746bae4c9e9 641 Gene3D G3DSA:1.20.58.60 560 630 4.5E-4 T 23-04-2016 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 Gene3D G3DSA:3.40.800.10 5 288 1.4E-43 T 23-04-2016 IPR023696 Ureohydrolase domain NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 SUPERFAMILY SSF52768 4 296 1.75E-48 T 23-04-2016 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 PANTHER PTHR11358 67 285 1.6E-25 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 PRINTS PR00116 Arginase signature 173 191 3.0E-8 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 PRINTS PR00116 Arginase signature 97 112 3.0E-8 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 PRINTS PR00116 Arginase signature 223 252 3.0E-8 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS13965 3dd88072e5a2e26db3bb154c73f99070 300 Pfam PF00491 Arginase family 73 293 4.6E-29 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 412 1.8E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 Gene3D G3DSA:3.30.565.10 283 419 5.1E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 SMART SM00387 322 424 2.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 SMART SM00388 213 279 4.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 SUPERFAMILY SSF47384 199 280 2.35E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 PANTHER PTHR24423 211 406 4.3E-29 T 23-04-2016 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 PANTHER PTHR24423 1 8 4.3E-29 T 23-04-2016 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 278 2.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 Gene3D G3DSA:1.10.287.130 206 275 4.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS23770 1ef1471fcf0c3c35dcacccfe429e547c 425 SUPERFAMILY SSF55874 283 412 1.7E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 87 347 3.3E-32 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 Gene3D G3DSA:2.60.120.260 451 578 1.2E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 PANTHER PTHR31297:SF13 30 319 2.5E-40 T 23-04-2016 NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 Gene3D G3DSA:3.20.20.80 26 52 1.9E-68 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 Gene3D G3DSA:3.20.20.80 92 373 1.9E-68 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 PANTHER PTHR31297 30 319 2.5E-40 T 23-04-2016 NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 SUPERFAMILY SSF49785 470 577 2.89E-14 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30385 4c2f7fd9a5f3fb3f6608a112a8b9a6ab 580 SUPERFAMILY SSF51445 33 352 3.14E-61 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 Pfam PF01047 MarR family 43 102 5.0E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 SUPERFAMILY SSF46785 19 147 8.24E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 SMART SM00347 36 136 3.9E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 4.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 4.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 4.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 Gene3D G3DSA:1.10.10.10 14 147 7.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30720 f4d62e58ad5a697f41e7369d208742e9 150 PANTHER PTHR33164 23 147 1.6E-18 T 23-04-2016 NIAKO_RS19950 8c7092593145f48f654f533322608562 502 Pfam PF16407 PKD-like family 37 155 4.0E-12 T 23-04-2016 IPR032183 PKD-like family NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Pfam PF00925 GTP cyclohydrolase II 209 373 8.0E-73 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 PANTHER PTHR21327 1 397 2.1E-228 T 23-04-2016 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 204 399 41.066 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 395 53.429 T 23-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.121 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 198 4.3E-82 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 SUPERFAMILY SSF142695 204 375 1.2E-71 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 212 396 7.5E-76 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 PANTHER PTHR21327:SF6 1 397 2.1E-228 T 23-04-2016 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 PIRSF PIRSF001259 1 400 1.3E-178 T 23-04-2016 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 199 7.5E-75 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 SUPERFAMILY SSF55821 3 205 7.78E-83 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS01975 fefc33bee8be4796723145383bd1ab61 400 Gene3D G3DSA:3.90.870.10 2 209 2.1E-94 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 Gene3D G3DSA:2.60.120.260 237 359 9.0E-14 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 PANTHER PTHR22901:SF1 1 223 1.9E-164 T 23-04-2016 NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 PANTHER PTHR22901:SF1 381 641 1.9E-164 T 23-04-2016 NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 SUPERFAMILY SSF52266 409 593 4.3E-78 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 SUPERFAMILY SSF52266 104 207 4.3E-78 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 PANTHER PTHR22901 1 223 1.9E-164 T 23-04-2016 NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 PANTHER PTHR22901 381 641 1.9E-164 T 23-04-2016 NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 105 532 1.7E-100 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 SUPERFAMILY SSF49785 243 367 6.38E-15 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11770 55866714bd44ba2221712557c71de118 647 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 268 380 1.2E-6 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS20760 38cc5e6dd2e743b3a88dd858061e9ecc 339 PANTHER PTHR13833 44 274 1.2E-12 T 23-04-2016 NIAKO_RS20760 38cc5e6dd2e743b3a88dd858061e9ecc 339 Gene3D G3DSA:2.130.10.10 31 275 3.1E-36 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS20760 38cc5e6dd2e743b3a88dd858061e9ecc 339 SUPERFAMILY SSF51004 44 309 2.62E-41 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NIAKO_RS20760 38cc5e6dd2e743b3a88dd858061e9ecc 339 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 134 169 2.0E-7 T 23-04-2016 IPR011964 YVTN beta-propeller repeat NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SUPERFAMILY SSF48452 473 608 5.22E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 Gene3D G3DSA:1.25.40.10 338 606 6.0E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 PANTHER PTHR23083 341 602 1.8E-28 T 23-04-2016 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 PANTHER PTHR23083 1 10 1.8E-28 T 23-04-2016 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 6 158 5.3E-13 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 Gene3D G3DSA:3.30.70.1230 5 160 7.1E-27 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SMART SM00028 474 507 41.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SMART SM00028 325 361 13.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SMART SM00028 542 575 35.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SMART SM00028 440 473 8.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SMART SM00028 405 439 320.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SUPERFAMILY SSF48452 341 508 6.2E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 Pfam PF13432 Tetratricopeptide repeat 421 474 0.0027 T 23-04-2016 NIAKO_RS14495 2c212eab6879122c69c1b2030b826918 642 SUPERFAMILY SSF55073 2 160 1.55E-38 T 23-04-2016 IPR029787 Nucleotide cyclase NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 99 8.9E-32 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 ProSitePatterns PS01169 Ribosomal protein L21 signature. 70 92 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 SUPERFAMILY SSF141091 1 99 1.27E-28 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 99 1.9E-25 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 PANTHER PTHR21349 1 100 1.5E-28 T 23-04-2016 NIAKO_RS02835 994e3fb20c0f8259f1494d752fbdb7de 100 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 100 19.395 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 272 302 4.4E-13 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 Pfam PF07715 TonB-dependent Receptor Plug Domain 189 296 3.0E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 PANTHER PTHR11532 96 501 7.2E-102 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF49464 96 177 3.14E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 Gene3D G3DSA:2.60.40.1120 97 183 2.9E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 PANTHER PTHR11532:SF57 622 1138 7.2E-102 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 Pfam PF13715 CarboxypepD_reg-like domain 97 179 1.6E-14 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF56935 401 490 1.74E-54 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF56935 1058 1138 1.74E-54 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF56935 534 906 1.74E-54 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF56935 177 319 1.74E-54 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 SUPERFAMILY SSF56935 969 1015 1.74E-54 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 Gene3D G3DSA:2.170.130.10 189 305 3.7E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 PANTHER PTHR11532:SF57 96 501 7.2E-102 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 PANTHER PTHR11532 622 1138 7.2E-102 T 23-04-2016 NIAKO_RS00990 95677644d45bfc79e4859197a9b48a4c 1140 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 96 1139 3.1E-152 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 14.005 T 23-04-2016 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 SUPERFAMILY SSF81333 14 78 5.1E-15 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 22 78 1.2E-17 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 Gene3D G3DSA:1.20.20.10 16 78 1.3E-19 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 PRINTS PR00124 ATP synthase C subunit signature 35 50 2.5E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 PRINTS PR00124 ATP synthase C subunit signature 14 33 2.5E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 PRINTS PR00124 ATP synthase C subunit signature 52 77 2.5E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 42 63 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 PANTHER PTHR10031 17 69 3.9E-12 T 23-04-2016 NIAKO_RS33990 f103f59d29e00d618b617eb7abc11020 79 Pfam PF00137 ATP synthase subunit C 19 75 1.2E-9 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NIAKO_RS03475 dc04c8f306b78243d6d81794b369d5f9 354 Gene3D G3DSA:3.40.50.2000 168 302 1.1E-19 T 23-04-2016 NIAKO_RS03475 dc04c8f306b78243d6d81794b369d5f9 354 Pfam PF00534 Glycosyl transferases group 1 169 304 2.7E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS03475 dc04c8f306b78243d6d81794b369d5f9 354 PANTHER PTHR12526 1 343 1.6E-40 T 23-04-2016 NIAKO_RS03475 dc04c8f306b78243d6d81794b369d5f9 354 SUPERFAMILY SSF53756 10 340 6.67E-58 T 23-04-2016 NIAKO_RS03475 dc04c8f306b78243d6d81794b369d5f9 354 Pfam PF13439 Glycosyltransferase Family 4 18 118 3.9E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS10785 ebb39ae4611c38bcf551167e0a3452f9 309 PANTHER PTHR20883 81 302 1.4E-13 T 23-04-2016 NIAKO_RS10785 ebb39ae4611c38bcf551167e0a3452f9 309 SUPERFAMILY SSF51197 81 297 1.46E-38 T 23-04-2016 NIAKO_RS10785 ebb39ae4611c38bcf551167e0a3452f9 309 Gene3D G3DSA:2.60.120.620 78 304 2.2E-33 T 23-04-2016 NIAKO_RS10785 ebb39ae4611c38bcf551167e0a3452f9 309 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 86 284 9.6E-23 T 23-04-2016 IPR008775 Phytanoyl-CoA dioxygenase NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 Gene3D G3DSA:2.130.10.10 257 493 5.0E-12 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 Gene3D G3DSA:2.130.10.10 196 197 5.0E-12 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 Gene3D G3DSA:2.130.10.10 40 76 5.0E-12 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 Pfam PF00326 Prolyl oligopeptidase family 681 860 6.7E-24 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 Gene3D G3DSA:3.40.50.1820 607 861 8.3E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 PANTHER PTHR11731:SF142 448 871 8.2E-79 T 23-04-2016 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 SUPERFAMILY SSF53474 607 860 1.97E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 SUPERFAMILY SSF82171 127 280 3.14E-12 T 23-04-2016 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 SUPERFAMILY SSF82171 317 489 3.14E-12 T 23-04-2016 NIAKO_RS37140 691090654e883853828eb31f43b06b13 924 PANTHER PTHR11731 448 871 8.2E-79 T 23-04-2016 NIAKO_RS12460 03c76d56eefde73895cbf739c0b343a4 336 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 1 214 3.7E-68 T 23-04-2016 IPR019268 Protein of unknown function DUF2278 NIAKO_RS12460 03c76d56eefde73895cbf739c0b343a4 336 Pfam PF00932 Lamin Tail Domain 227 323 6.0E-13 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS12460 03c76d56eefde73895cbf739c0b343a4 336 Gene3D G3DSA:2.60.40.1260 220 300 3.3E-5 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS12460 03c76d56eefde73895cbf739c0b343a4 336 SUPERFAMILY SSF74853 220 323 6.02E-12 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 SMART SM00387 342 446 3.6E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 445 9.7E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 2.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 2.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 447 2.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 2.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 Gene3D G3DSA:3.30.565.10 303 446 2.1E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 SUPERFAMILY SSF55874 292 447 2.36E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PANTHER PTHR24423 110 447 1.1E-55 T 23-04-2016 NIAKO_RS05955 fbba4b9a58fd1fb2eb144a657fec16bc 447 PANTHER PTHR24423:SF450 110 447 1.1E-55 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 PANTHER PTHR24423:SF487 25 30 2.4E-46 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 SMART SM00448 163 275 7.4E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 SUPERFAMILY SSF46689 361 412 2.2E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 Pfam PF12833 Helix-turn-helix domain 331 408 2.8E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 SMART SM00342 325 408 1.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 Gene3D G3DSA:1.10.10.60 362 411 1.4E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 PANTHER PTHR24423 162 317 2.4E-46 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 PANTHER PTHR24423 25 30 2.4E-46 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 PANTHER PTHR24423:SF487 162 317 2.4E-46 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 Gene3D G3DSA:1.10.10.60 306 361 3.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 Pfam PF00072 Response regulator receiver domain 165 275 2.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 Gene3D G3DSA:3.40.50.2300 160 287 4.8E-39 T 23-04-2016 NIAKO_RS14170 dec724b50b2207027fccba3ed3e0025a 431 SUPERFAMILY SSF52172 163 301 1.42E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 289 8.2E-122 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 Gene3D G3DSA:3.40.50.1100 2 39 1.1E-78 T 23-04-2016 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 Gene3D G3DSA:3.40.50.1100 143 289 1.1E-78 T 23-04-2016 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 Gene3D G3DSA:3.40.50.1100 40 137 3.9E-31 T 23-04-2016 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 278 2.0E-64 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 289 6.0E-106 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 PANTHER PTHR10314:SF100 1 290 1.1E-131 T 23-04-2016 NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 SUPERFAMILY SSF53686 3 285 1.31E-85 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS04620 34671a95595c8d34d7d2733f2b63e4b0 290 PANTHER PTHR10314 1 290 1.1E-131 T 23-04-2016 NIAKO_RS34315 d1e8c7dd7c4bdd9f3b822764c4592006 155 SUPERFAMILY SSF46626 56 149 6.07E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS34315 d1e8c7dd7c4bdd9f3b822764c4592006 155 Pfam PF00034 Cytochrome c 64 150 2.3E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS34315 d1e8c7dd7c4bdd9f3b822764c4592006 155 Gene3D G3DSA:1.10.760.10 64 150 6.4E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 Pfam PF04055 Radical SAM superfamily 164 324 1.2E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 Gene3D G3DSA:3.80.30.20 164 352 4.3E-27 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 PANTHER PTHR11918:SF64 21 353 5.3E-59 T 23-04-2016 NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 Pfam PF02310 B12 binding domain 26 122 3.4E-9 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 PANTHER PTHR11918 21 353 5.3E-59 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 SUPERFAMILY SSF102114 159 366 8.89E-28 T 23-04-2016 NIAKO_RS27885 dbb608ad3d859acdb1733cd32c12aea3 467 SMART SM00729 160 368 3.2E-18 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS09030 cdd81426b06418436b1345cd5eea0e20 334 ProSitePatterns PS00800 Pectinesterase signature 1. 47 66 - T 23-04-2016 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS09030 cdd81426b06418436b1345cd5eea0e20 334 Pfam PF01095 Pectinesterase 23 245 1.2E-18 T 23-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS09030 cdd81426b06418436b1345cd5eea0e20 334 SUPERFAMILY SSF51126 18 278 2.75E-33 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS09030 cdd81426b06418436b1345cd5eea0e20 334 Gene3D G3DSA:2.160.20.10 19 297 3.2E-45 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS09030 cdd81426b06418436b1345cd5eea0e20 334 PANTHER PTHR31321 23 124 1.7E-20 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 PANTHER PTHR10366 3 281 3.3E-208 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 PANTHER PTHR10366 308 354 3.3E-208 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 PANTHER PTHR10366:SF32 3 281 3.3E-208 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 PANTHER PTHR10366:SF32 308 354 3.3E-208 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 344 2.2E-158 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 SUPERFAMILY SSF51735 2 346 6.77E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 349 1.5E-178 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 354 55.798 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 Gene3D G3DSA:3.40.50.720 1 189 5.0E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 Gene3D G3DSA:3.90.25.10 192 246 2.6E-50 T 23-04-2016 NIAKO_RS00390 6e44df8e966d0cf790e7efbdba05a59f 365 Gene3D G3DSA:3.90.25.10 302 354 2.6E-50 T 23-04-2016 NIAKO_RS31925 dcfa5737aa9657783c7b96e4bd607209 195 PANTHER PTHR24567:SF33 15 187 3.9E-21 T 23-04-2016 NIAKO_RS31925 dcfa5737aa9657783c7b96e4bd607209 195 PANTHER PTHR24567 15 187 3.9E-21 T 23-04-2016 NIAKO_RS31925 dcfa5737aa9657783c7b96e4bd607209 195 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 6.3E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS31925 dcfa5737aa9657783c7b96e4bd607209 195 Gene3D G3DSA:2.60.120.10 3 155 1.2E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS31925 dcfa5737aa9657783c7b96e4bd607209 195 SUPERFAMILY SSF51206 11 125 2.09E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS20725 3000c1f84038b9e4a14e9ebfd7bc6999 341 PANTHER PTHR34220 4 338 1.0E-53 T 23-04-2016 NIAKO_RS20725 3000c1f84038b9e4a14e9ebfd7bc6999 341 Pfam PF14501 GHKL domain 247 338 1.1E-5 T 23-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain NIAKO_RS20725 3000c1f84038b9e4a14e9ebfd7bc6999 341 Pfam PF06580 Histidine kinase 149 227 1.9E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 3 227 37.645 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PANTHER PTHR12534 9 271 8.6E-100 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 SUPERFAMILY SSF52313 9 237 2.75E-81 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 9 227 1.6E-90 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 Gene3D G3DSA:3.40.50.10490 25 101 7.3E-64 T 23-04-2016 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 Gene3D G3DSA:3.40.50.10490 160 248 7.3E-64 T 23-04-2016 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 Gene3D G3DSA:1.10.287.610 102 153 2.0E-20 T 23-04-2016 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 Pfam PF00318 Ribosomal protein S2 11 226 3.3E-87 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 177 188 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 160 177 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS29695 5f38df90f37bed4b44d6269c10786d4b 316 PRINTS PR00395 Ribosomal protein S2 signature 198 212 1.8E-31 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 Pfam PF00410 Ribosomal protein S8 4 132 6.0E-50 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 132 30.574 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 Gene3D G3DSA:3.30.1370.30 1 70 1.8E-28 T 23-04-2016 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 SUPERFAMILY SSF56047 1 132 1.44E-45 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 Gene3D G3DSA:3.30.1490.10 76 132 5.1E-27 T 23-04-2016 NIAKO_RS22930 59a2464afdf901ae57b0d18c0de77647 132 PANTHER PTHR11758 1 132 8.6E-58 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS10360 2f9e4a41812930cd83adf94cde0a7e46 357 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 2 272 4.7E-83 T 23-04-2016 IPR018712 Domain of unknown function DUF2235 NIAKO_RS10360 2f9e4a41812930cd83adf94cde0a7e46 357 PANTHER PTHR33840 2 352 6.4E-91 T 23-04-2016 NIAKO_RS10360 2f9e4a41812930cd83adf94cde0a7e46 357 PANTHER PTHR33840:SF1 2 352 6.4E-91 T 23-04-2016 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 PANTHER PTHR10030 26 459 7.3E-78 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 Pfam PF00754 F5/8 type C domain 349 448 1.8E-12 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 84 100 7.4E-5 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 129 148 7.4E-5 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 274 295 7.4E-5 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 Pfam PF01120 Alpha-L-fucosidase 19 318 1.3E-48 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 SMART SM00812 15 337 4.7E-18 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 Gene3D G3DSA:2.60.120.260 334 458 6.0E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 PANTHER PTHR10030:SF25 26 459 7.3E-78 T 23-04-2016 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 SUPERFAMILY SSF49785 333 457 5.88E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 Gene3D G3DSA:3.20.20.80 21 317 9.8E-76 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11125 953faf2cbd2a6ff14407310450b5711b 460 SUPERFAMILY SSF51445 26 318 3.23E-77 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS37265 96712253bfa41155d9934e922896a3b5 1031 Gene3D G3DSA:2.60.40.10 499 539 5.7E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS37265 96712253bfa41155d9934e922896a3b5 1031 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 951 1026 6.2E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 Pfam PF05954 Phage late control gene D protein (GPD) 68 335 1.1E-11 T 23-04-2016 NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 SUPERFAMILY SSF69279 15 183 4.68E-17 T 23-04-2016 NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 SUPERFAMILY SSF69349 431 590 7.85E-7 T 23-04-2016 NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 Gene3D G3DSA:3.55.50.10 106 180 2.5E-6 T 23-04-2016 NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 Gene3D G3DSA:2.40.50.230 365 439 2.3E-21 T 23-04-2016 IPR006531 Gp5 N-terminal NIAKO_RS12800 b060b6229d9fbb4cc071f8a3677e8b1b 605 SUPERFAMILY SSF69255 364 439 1.2E-20 T 23-04-2016 NIAKO_RS16155 40f1c31947be79eae9c314ad68c4279a 337 PIRSF PIRSF018266 11 336 7.2E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16155 40f1c31947be79eae9c314ad68c4279a 337 PANTHER PTHR30273 12 336 4.0E-41 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16155 40f1c31947be79eae9c314ad68c4279a 337 Pfam PF04773 FecR protein 129 222 1.1E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16155 40f1c31947be79eae9c314ad68c4279a 337 PANTHER PTHR30273:SF2 12 336 4.0E-41 T 23-04-2016 NIAKO_RS16155 40f1c31947be79eae9c314ad68c4279a 337 Pfam PF16344 Domain of unknown function (DUF4974) 255 330 2.9E-8 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 281 2.6E-28 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 SUPERFAMILY SSF111369 50 285 3.01E-27 T 23-04-2016 NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 PANTHER PTHR30572 1 304 1.0E-87 T 23-04-2016 NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 306 4.8E-51 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 PANTHER PTHR30572:SF1 1 304 1.0E-87 T 23-04-2016 NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 Gene3D G3DSA:2.40.50.100 61 94 9.1E-17 T 23-04-2016 NIAKO_RS33005 3b2fc378c08e6818ee8f6a6a895f9ef3 435 Gene3D G3DSA:2.40.50.100 169 200 9.1E-17 T 23-04-2016 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 PANTHER PTHR33620 15 137 3.7E-26 T 23-04-2016 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 Pfam PF02814 UreE urease accessory protein, N-terminal domain 14 70 6.1E-13 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 PANTHER PTHR33620:SF2 15 137 3.7E-26 T 23-04-2016 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 148 19.244 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 SUPERFAMILY SSF69737 76 137 5.23E-14 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 SUPERFAMILY SSF69287 1 74 2.22E-13 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 SMART SM00988 6 70 1.3E-5 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 Gene3D G3DSA:3.30.70.790 76 138 7.9E-18 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 Gene3D G3DSA:2.60.260.20 1 74 5.7E-20 T 23-04-2016 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 PIRSF PIRSF036402 1 154 1.0E-36 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 NIAKO_RS02195 22f4dd147e7f5635375ace5af9e4d90e 167 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 135 2.5E-9 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SUPERFAMILY SSF54862 674 846 3.21E-19 T 23-04-2016 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF10371 Domain of unknown function 638 687 1.1E-20 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SMART SM00890 631 688 5.3E-25 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:3.40.50.970 10 262 5.6E-109 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SUPERFAMILY SSF53323 429 677 1.57E-69 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 PIRSF PIRSF000159 5 1190 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 PANTHER PTHR32154 8 1191 0.0 T 23-04-2016 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 754 765 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 698 709 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF13484 4Fe-4S double cluster binding domain 698 766 9.4E-10 T 23-04-2016 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 971 1082 4.4E-10 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SUPERFAMILY SSF52922 264 424 3.71E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SUPERFAMILY SSF52518 803 1186 2.92E-123 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:3.30.70.20 680 777 1.3E-18 T 23-04-2016 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:4.10.780.10 640 677 3.4E-15 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:3.40.50.920 264 423 7.3E-60 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 251 4.8E-81 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 435 616 4.1E-25 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:3.40.50.970 804 1183 2.2E-130 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 SUPERFAMILY SSF52518 11 262 3.24E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Gene3D G3DSA:3.40.920.10 429 627 1.5E-70 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 PANTHER PTHR32154:SF0 8 1191 0.0 T 23-04-2016 NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 355 2.7E-12 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II NIAKO_RS06185 145cad0977eebfd0d71d32411a7aea5b 1193 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 10 1182 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 Pfam PF12704 MacB-like periplasmic core domain 20 242 8.7E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 PANTHER PTHR30572 402 793 5.8E-82 T 23-04-2016 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 PANTHER PTHR30572 291 357 5.8E-82 T 23-04-2016 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 PANTHER PTHR30572:SF4 402 793 5.8E-82 T 23-04-2016 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 PANTHER PTHR30572:SF4 291 357 5.8E-82 T 23-04-2016 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 Pfam PF02687 FtsX-like permease family 673 781 4.7E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS24055 092fe4462e6a717480f869c3408114b3 793 Pfam PF02687 FtsX-like permease family 291 407 1.2E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 PANTHER PTHR32309 197 772 5.1E-126 T 23-04-2016 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 PANTHER PTHR32309 9 126 5.1E-126 T 23-04-2016 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 558 762 1.4E-40 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 SUPERFAMILY SSF52540 577 758 9.15E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 Pfam PF13807 G-rich domain on putative tyrosine kinase 435 511 5.1E-8 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 PANTHER PTHR32309:SF13 197 772 5.1E-126 T 23-04-2016 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 PANTHER PTHR32309:SF13 9 126 5.1E-126 T 23-04-2016 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 579 750 2.8E-6 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 Pfam PF02706 Chain length determinant protein 19 237 2.0E-9 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NIAKO_RS33210 5be8af31600fef022fe97700d84fe525 803 Gene3D G3DSA:3.40.50.300 578 754 2.5E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 SUPERFAMILY SSF143975 3 379 9.55E-137 T 23-04-2016 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 PANTHER PTHR21000 1 561 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 Pfam PF00920 Dehydratase family 36 555 1.1E-214 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 PANTHER PTHR21000:SF5 1 561 0.0 T 23-04-2016 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 20 558 1.7E-220 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 SUPERFAMILY SSF52016 381 558 3.92E-58 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS00490 c1c70a4a21625f440739921130471c14 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 558 41.988 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 Pfam PF00754 F5/8 type C domain 372 490 3.3E-13 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 Gene3D G3DSA:2.115.10.20 42 353 4.1E-92 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 Gene3D G3DSA:2.60.120.260 365 497 2.6E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 Pfam PF04616 Glycosyl hydrolases family 43 45 337 1.5E-59 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 SUPERFAMILY SSF49785 372 499 8.51E-21 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 SUPERFAMILY SSF75005 44 355 3.04E-64 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 PANTHER PTHR22925 44 462 5.1E-101 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS00180 37c150820f63adcf84b6546bed70c42b 503 PANTHER PTHR22925:SF12 44 462 5.1E-101 T 23-04-2016 NIAKO_RS31395 050d1e0aa9d5746eb2e7301d8fdfe8d7 132 SUPERFAMILY SSF49764 20 131 1.01E-18 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS31395 050d1e0aa9d5746eb2e7301d8fdfe8d7 132 Gene3D G3DSA:2.60.40.790 24 131 1.2E-16 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS31395 050d1e0aa9d5746eb2e7301d8fdfe8d7 132 Pfam PF00011 Hsp20/alpha crystallin family 34 131 1.6E-11 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Gene3D G3DSA:2.60.40.10 1139 1214 4.3E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Gene3D G3DSA:2.60.40.10 1240 1304 5.1E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Gene3D G3DSA:2.160.20.10 33 263 1.9E-35 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SUPERFAMILY SSF51126 701 1092 1.32E-15 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 2269 2342 7.3E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SUPERFAMILY SSF49265 433 521 3.65E-10 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 PANTHER PTHR31683:SF9 33 86 3.5E-16 T 23-04-2016 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SMART SM00060 436 513 0.07 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SMART SM00060 1127 1205 8.7 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SMART SM00060 1228 1304 0.2 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 PANTHER PTHR31683 33 86 3.5E-16 T 23-04-2016 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SUPERFAMILY SSF51126 22 338 5.42E-42 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Pfam PF12951 Passenger-associated-transport-repeat 717 746 0.0018 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Pfam PF12951 Passenger-associated-transport-repeat 952 979 1.1E-8 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Pfam PF12951 Passenger-associated-transport-repeat 618 642 6.1E-5 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 SUPERFAMILY SSF49265 1137 1305 4.78E-12 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 616 647 7.6E-8 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 950 981 1.1E-10 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 716 747 8.2E-8 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat NIAKO_RS06610 a6de0b722bbc750d74df2a3e8ccbae18 2345 Gene3D G3DSA:2.60.40.10 429 520 2.2E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS18970 273379400230adebc8cea625fd88c3b0 163 SUPERFAMILY SSF52833 28 157 2.67E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18970 273379400230adebc8cea625fd88c3b0 163 PANTHER PTHR10681 28 159 2.9E-21 T 23-04-2016 NIAKO_RS18970 273379400230adebc8cea625fd88c3b0 163 PANTHER PTHR10681:SF104 28 159 2.9E-21 T 23-04-2016 NIAKO_RS18970 273379400230adebc8cea625fd88c3b0 163 Gene3D G3DSA:3.40.30.10 27 160 3.5E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18970 273379400230adebc8cea625fd88c3b0 163 Pfam PF00578 AhpC/TSA family 29 143 4.6E-21 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 Pfam PF07980 SusD family 324 590 1.6E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 Pfam PF14322 Starch-binding associating with outer membrane 23 222 4.3E-26 T 23-04-2016 NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 Gene3D G3DSA:1.25.40.10 371 467 9.1E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 Gene3D G3DSA:1.25.40.10 206 329 9.1E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 SUPERFAMILY SSF48452 19 495 4.55E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06605 dfa42c6ac6cc6217581501f1301ce500 611 SUPERFAMILY SSF48452 576 603 4.55E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 325 353 4.1E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Pfam PF13715 CarboxypepD_reg-like domain 151 228 7.7E-16 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532:SF57 150 593 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532:SF57 745 1199 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532:SF57 676 709 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SMART SM00965 80 131 3.6E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 150 1201 8.1E-155 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Pfam PF07660 Secretin and TonB N terminus short domain 80 130 4.1E-12 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.40.170.20 646 962 3.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.40.170.20 1033 1058 3.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.40.170.20 1107 1201 3.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.40.170.20 352 369 3.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.40.170.20 462 603 3.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF56935 1024 1068 3.85E-59 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF56935 453 541 3.85E-59 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF56935 1114 1201 3.85E-59 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF56935 587 955 3.85E-59 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF56935 236 375 3.85E-59 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 SUPERFAMILY SSF49464 150 224 4.84E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Pfam PF07715 TonB-dependent Receptor Plug Domain 243 348 3.6E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532 150 593 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532 745 1199 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 PANTHER PTHR11532 676 709 1.9E-128 T 23-04-2016 NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.60.40.1120 151 228 5.6E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20210 1f182c0b80453785220fa26d3a6325ce 1201 Gene3D G3DSA:2.170.130.10 264 351 1.3E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 SUPERFAMILY SSF49785 745 902 5.39E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 PANTHER PTHR36848:SF1 24 903 1.3E-166 T 23-04-2016 NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 Pfam PF17132 alpha-L-rhamnosidase 170 681 2.0E-54 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 Pfam PF17132 alpha-L-rhamnosidase 29 149 2.5E-10 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 Gene3D G3DSA:2.60.120.260 772 852 1.2E-9 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10580 4c366dacb3c1d41f995f6f1c79d286e7 905 PANTHER PTHR36848 24 903 1.3E-166 T 23-04-2016 NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 Gene3D G3DSA:3.40.50.720 1 252 1.2E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PANTHER PTHR24321:SF6 3 253 1.8E-65 T 23-04-2016 NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PANTHER PTHR24321 3 253 1.8E-65 T 23-04-2016 NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 SUPERFAMILY SSF51735 5 252 3.73E-82 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 2.1E-65 T 23-04-2016 NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.7E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.7E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32960 56ba902d343da46878b1b15d670f36ed 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.7E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 9 285 3.2E-118 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 SUPERFAMILY SSF52518 7 355 2.28E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Pfam PF02779 Transketolase, pyrimidine binding domain 325 486 9.0E-34 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Pfam PF02780 Transketolase, C-terminal domain 503 624 5.5E-27 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 8 633 42.746 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Gene3D G3DSA:3.40.50.920 504 632 5.1E-38 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 PANTHER PTHR11624 244 642 5.2E-285 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 PANTHER PTHR11624 22 216 5.2E-285 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 ProSitePatterns PS00802 Transketolase signature 2. 431 447 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 SUPERFAMILY SSF52922 500 633 2.62E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 PANTHER PTHR11624:SF20 244 642 5.2E-285 T 23-04-2016 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 PANTHER PTHR11624:SF20 22 216 5.2E-285 T 23-04-2016 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Gene3D G3DSA:3.40.50.970 303 503 1.3E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Gene3D G3DSA:3.40.50.970 242 302 1.8E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 Gene3D G3DSA:3.40.50.970 7 193 1.8E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 SMART SM00861 325 491 3.2E-55 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 ProSitePatterns PS00801 Transketolase signature 1. 34 53 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 632 6.0E-239 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28065 f12845ead53a04c037f27933ab958bc9 643 SUPERFAMILY SSF52518 314 487 4.21E-55 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06480 c0be1c99e5688432849573ac11f6eb54 180 SUPERFAMILY SSF55729 5 173 3.75E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS06480 c0be1c99e5688432849573ac11f6eb54 180 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 2.5E-20 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS06480 c0be1c99e5688432849573ac11f6eb54 180 PANTHER PTHR13256 5 180 4.2E-36 T 23-04-2016 NIAKO_RS06480 c0be1c99e5688432849573ac11f6eb54 180 Gene3D G3DSA:3.40.630.30 6 174 5.1E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 Gene3D G3DSA:1.10.10.60 224 268 3.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 PANTHER PTHR11019:SF50 29 268 1.3E-17 T 23-04-2016 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 SUPERFAMILY SSF46689 178 221 1.79E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 SMART SM00342 187 268 1.7E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 Pfam PF12833 Helix-turn-helix domain 194 268 3.1E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 SUPERFAMILY SSF46689 223 268 1.3E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 PANTHER PTHR11019 29 268 1.3E-17 T 23-04-2016 NIAKO_RS08490 c1ad6ad93baac9e535aa02b553fb294a 268 Gene3D G3DSA:1.10.10.60 178 223 4.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 SUPERFAMILY SSF55874 847 949 5.76E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 SUPERFAMILY SSF63829 258 433 7.52E-6 T 23-04-2016 NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 Pfam PF07495 Y_Y_Y domain 668 727 1.2E-10 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 PANTHER PTHR34220 738 954 2.9E-37 T 23-04-2016 NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 Gene3D G3DSA:3.30.565.10 837 988 2.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 Pfam PF06580 Histidine kinase 780 857 6.6E-21 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS03030 6fe11625d8146277ea9e4fd7b4a918b3 990 Pfam PF07494 Two component regulator propeller 31 53 0.0079 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS20530 ba89415abf2ec362c882ce72c883f83e 304 Pfam PF03631 Virulence factor BrkB 26 281 1.3E-35 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS20530 ba89415abf2ec362c882ce72c883f83e 304 PANTHER PTHR30213:SF1 15 278 7.2E-30 T 23-04-2016 NIAKO_RS20530 ba89415abf2ec362c882ce72c883f83e 304 PIRSF PIRSF035875 2 304 9.9E-41 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS20530 ba89415abf2ec362c882ce72c883f83e 304 PANTHER PTHR30213 15 278 7.2E-30 T 23-04-2016 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 Pfam PF00162 Phosphoglycerate kinase 6 388 3.4E-155 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 8 24 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 7.4E-89 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 SUPERFAMILY SSF53748 3 398 1.3E-147 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 Gene3D G3DSA:3.40.50.1270 182 386 3.9E-81 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 Gene3D G3DSA:3.40.50.1260 3 180 2.4E-69 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PIRSF PIRSF000724 1 398 5.8E-152 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 PANTHER PTHR11406 8 398 1.1E-206 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS25295 1127e0ee66254125e451802272b7ecd5 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 3 398 40.05 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NIAKO_RS17120 42b1159f5fca56b97393a0c4b5fffc1f 465 PANTHER PTHR11814 3 465 6.5E-144 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NIAKO_RS17120 42b1159f5fca56b97393a0c4b5fffc1f 465 Pfam PF00916 Sulfate permease family 136 333 7.2E-26 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NIAKO_RS17120 42b1159f5fca56b97393a0c4b5fffc1f 465 Pfam PF00916 Sulfate permease family 3 134 1.0E-19 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NIAKO_RS17120 42b1159f5fca56b97393a0c4b5fffc1f 465 PANTHER PTHR11814:SF123 3 465 6.5E-144 T 23-04-2016 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 Gene3D G3DSA:3.40.50.1820 473 727 3.1E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 PANTHER PTHR11731:SF110 29 724 2.4E-188 T 23-04-2016 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 SUPERFAMILY SSF53474 473 726 2.42E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 82 441 7.4E-88 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 PANTHER PTHR11731 29 724 2.4E-188 T 23-04-2016 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 SUPERFAMILY SSF82171 29 445 3.27E-56 T 23-04-2016 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 Pfam PF00326 Prolyl oligopeptidase family 533 709 8.2E-38 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS23030 519ba2177fc4f2cf6617e49f9ed82392 732 Gene3D G3DSA:2.140.10.30 29 453 3.6E-114 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 Gene3D G3DSA:2.60.120.520 20 130 9.8E-53 T 23-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 Pfam PF04962 KduI/IolB family 52 269 1.2E-35 T 23-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 54.521 T 23-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 PANTHER PTHR38461 1 276 4.2E-163 T 23-04-2016 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 Gene3D G3DSA:2.60.120.500 131 276 1.6E-76 T 23-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 PIRSF PIRSF006625 1 276 8.2E-134 T 23-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 NIAKO_RS03540 ddc57029969ac74860759e75303cae4c 276 SUPERFAMILY SSF51182 1 260 1.53E-107 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 SUPERFAMILY SSF46689 3 74 4.0E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 Gene3D G3DSA:1.10.357.10 3 189 3.2E-36 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.5E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.5E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 SUPERFAMILY SSF48498 79 178 2.6E-16 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 PANTHER PTHR30055 4 177 1.6E-22 T 23-04-2016 NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 Pfam PF16925 Bacterial transcriptional repressor C-terminal 99 175 3.3E-11 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS09120 0bf4cfeff8a206488fc123360d8caca7 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.1E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS11460 c1aeb5cdcf4b9b8a801b3df1e9d0cbe4 169 PANTHER PTHR30265 7 164 1.1E-23 T 23-04-2016 NIAKO_RS11460 c1aeb5cdcf4b9b8a801b3df1e9d0cbe4 169 Pfam PF02357 Transcription termination factor nusG 7 100 6.2E-13 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS11460 c1aeb5cdcf4b9b8a801b3df1e9d0cbe4 169 SUPERFAMILY SSF82679 7 105 2.35E-18 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS11460 c1aeb5cdcf4b9b8a801b3df1e9d0cbe4 169 Gene3D G3DSA:3.30.70.940 7 101 9.6E-9 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS11460 c1aeb5cdcf4b9b8a801b3df1e9d0cbe4 169 PANTHER PTHR30265:SF3 7 164 1.1E-23 T 23-04-2016 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 48 286 2.7E-60 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 SUPERFAMILY SSF48208 290 771 4.93E-75 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 PIRSF PIRSF007663 24 779 8.1E-248 T 23-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 PANTHER PTHR31084:SF0 32 771 8.9E-257 T 23-04-2016 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 PANTHER PTHR31084 32 771 8.9E-257 T 23-04-2016 NIAKO_RS08355 0f58c2090c6a09a7f9049ef33813591f 834 Gene3D G3DSA:2.70.98.50 48 420 4.9E-127 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS03240 0216c9f89826f5b16b9aa3b0cf6215ae 695 Pfam PF14905 Outer membrane protein beta-barrel family 277 668 1.6E-82 T 23-04-2016 NIAKO_RS03240 0216c9f89826f5b16b9aa3b0cf6215ae 695 SUPERFAMILY SSF56935 9 670 8.79E-40 T 23-04-2016 NIAKO_RS03240 0216c9f89826f5b16b9aa3b0cf6215ae 695 Gene3D G3DSA:2.40.170.20 107 670 7.3E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14320 c57d6a065ebea5ac4e1f2c5d8b290150 82 Pfam PF01541 GIY-YIG catalytic domain 2 73 3.6E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS14320 c57d6a065ebea5ac4e1f2c5d8b290150 82 SUPERFAMILY SSF82771 1 69 4.84E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 SMART SM01403 6 100 2.8E-53 T 23-04-2016 IPR027486 Ribosomal protein S10 domain NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 SUPERFAMILY SSF54999 4 100 1.28E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 25.948 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 Gene3D G3DSA:3.30.70.600 3 100 4.8E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 100 1.0E-43 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 1.5E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 PANTHER PTHR11700 1 100 6.2E-47 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 3.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 3.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS23010 00506193e0d71a227cb1bb182ff61663 101 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 3.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS34810 e53dc11c7f1bbc2e7653bd6a8d424d23 109 PANTHER PTHR11434:SF0 3 108 1.9E-35 T 23-04-2016 NIAKO_RS34810 e53dc11c7f1bbc2e7653bd6a8d424d23 109 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 104 2.0E-25 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS34810 e53dc11c7f1bbc2e7653bd6a8d424d23 109 PANTHER PTHR11434 3 108 1.9E-35 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS34810 e53dc11c7f1bbc2e7653bd6a8d424d23 109 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 109 19.344 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 Gene3D G3DSA:3.40.718.10 2 357 1.2E-123 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 340 4.6E-137 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 PANTHER PTHR11835 3 357 2.6E-176 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 PANTHER PTHR11835:SF35 3 357 2.6E-176 T 23-04-2016 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 SUPERFAMILY SSF53659 3 357 4.03E-115 T 23-04-2016 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 357 45.737 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 352 6.3E-125 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS13215 3e26ef6ad49028bc196aa179ac3dfae1 357 SMART SM01329 5 353 3.6E-183 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Pfam PF13087 AAA domain 1343 1553 2.5E-18 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Pfam PF05406 WGR domain 1763 1824 2.1E-14 T 23-04-2016 IPR008893 WGR domain NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 SUPERFAMILY SSF56112 124 220 4.74E-6 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887 1491 1556 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887 1180 1302 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887 620 717 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887 181 206 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887 1326 1475 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Gene3D G3DSA:1.10.510.10 126 228 2.6E-6 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Pfam PF13195 Protein of unknown function (DUF4011) 256 412 2.5E-11 T 23-04-2016 IPR025103 Protein of unknown function DUF4011 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Gene3D G3DSA:2.20.140.10 1762 1824 1.5E-20 T 23-04-2016 IPR008893 WGR domain NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 SUPERFAMILY SSF142921 1766 1824 3.79E-7 T 23-04-2016 IPR008893 WGR domain NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Pfam PF13245 Part of AAA domain 637 685 3.1E-8 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 SUPERFAMILY SSF52540 620 689 1.68E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 SUPERFAMILY SSF52540 1249 1551 1.68E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Gene3D G3DSA:3.40.50.300 1263 1375 3.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 Gene3D G3DSA:3.40.50.300 591 729 3.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887:SF340 1491 1556 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887:SF340 1180 1302 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887:SF340 620 717 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887:SF340 181 206 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 PANTHER PTHR10887:SF340 1326 1475 1.3E-52 T 23-04-2016 NIAKO_RS05555 ec1e12f9a72db82400376b84adacce49 1828 SMART SM00773 1757 1826 3.6E-8 T 23-04-2016 IPR008893 WGR domain NIAKO_RS29785 aedcbd33fe5ef09b902e595c564fbbc4 564 Gene3D G3DSA:2.60.40.1260 36 127 5.5E-6 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS29785 aedcbd33fe5ef09b902e595c564fbbc4 564 Pfam PF13585 C-terminal domain of CHU protein family 467 557 7.0E-8 T 23-04-2016 NIAKO_RS29785 aedcbd33fe5ef09b902e595c564fbbc4 564 SUPERFAMILY SSF74853 20 132 4.45E-11 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS29785 aedcbd33fe5ef09b902e595c564fbbc4 564 Pfam PF00932 Lamin Tail Domain 287 402 3.8E-12 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS29785 aedcbd33fe5ef09b902e595c564fbbc4 564 Pfam PF00932 Lamin Tail Domain 19 128 3.7E-15 T 23-04-2016 IPR001322 Lamin Tail Domain NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 Gene3D G3DSA:3.60.15.10 65 251 2.6E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 PANTHER PTHR36839:SF1 10 269 5.3E-79 T 23-04-2016 NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 Pfam PF00753 Metallo-beta-lactamase superfamily 81 207 2.2E-5 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 PANTHER PTHR36839 10 269 5.3E-79 T 23-04-2016 NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 SUPERFAMILY SSF56281 61 245 6.58E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS01005 2c4eadd3037d2b84af6b69e1fa0dcbf9 269 SMART SM00849 77 245 1.5E-4 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 PANTHER PTHR24032 3 192 4.0E-14 T 23-04-2016 NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 Pfam PF00149 Calcineurin-like phosphoesterase 1 148 1.2E-12 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 SUPERFAMILY SSF56300 119 174 3.32E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 SUPERFAMILY SSF56300 1 88 3.32E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 PANTHER PTHR24032:SF31 3 192 4.0E-14 T 23-04-2016 NIAKO_RS23990 15eeb704c9418965425a108b092a2467 194 Gene3D G3DSA:3.60.21.10 1 171 1.4E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 PANTHER PTHR34298 1 363 8.9E-41 T 23-04-2016 NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 SUPERFAMILY SSF46785 95 168 7.21E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 177 3.7E-47 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 184 1.0E-32 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 Gene3D G3DSA:1.10.10.10 5 88 6.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 SUPERFAMILY SSF46785 3 88 1.63E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37190 962f0ad1426f78169030d3bc8d8cd752 369 Gene3D G3DSA:1.10.10.10 95 168 2.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 Gene3D G3DSA:3.10.180.10 2 117 2.2E-40 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 PIRSF PIRSF021700 1 141 3.3E-54 T 23-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 106 4.4E-40 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 PANTHER PTHR33990:SF2 3 141 1.8E-60 T 23-04-2016 NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 SUPERFAMILY SSF54593 4 141 5.84E-43 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS07000 5377b5ca5b4376d0b0fa81b95f335edf 141 PANTHER PTHR33990 3 141 1.8E-60 T 23-04-2016 NIAKO_RS31300 1dee3337b00c7bbef73c5d616906a20b 272 PANTHER PTHR21624:SF2 80 233 1.7E-15 T 23-04-2016 NIAKO_RS31300 1dee3337b00c7bbef73c5d616906a20b 272 Pfam PF04116 Fatty acid hydroxylase superfamily 95 232 3.7E-25 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS31300 1dee3337b00c7bbef73c5d616906a20b 272 PANTHER PTHR21624 80 233 1.7E-15 T 23-04-2016 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 SMART SM00947 45 208 1.2E-49 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 PANTHER PTHR11002 20 223 2.5E-76 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 SUPERFAMILY SSF53056 11 207 4.58E-63 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 Pfam PF00484 Carbonic anhydrase 52 203 4.5E-44 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 Gene3D G3DSA:3.40.1050.10 10 212 1.3E-65 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 57 64 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS16580 c59f91e53b1b82b48d01f50578f66efc 224 PANTHER PTHR11002:SF20 20 223 2.5E-76 T 23-04-2016 NIAKO_RS11730 2fd930cba1e81d7fa42ac1bd1b0b01b4 493 Gene3D G3DSA:2.60.40.10 127 207 3.2E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 329 34.45 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 4.8E-6 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 181 5.0E-8 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 261 295 5.4E-6 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 145 5.0E-6 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Gene3D G3DSA:2.160.10.10 214 344 2.6E-27 T 23-04-2016 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Gene3D G3DSA:2.160.10.10 110 213 3.1E-27 T 23-04-2016 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 333 5.5E-107 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 PANTHER PTHR22572:SF117 101 298 7.9E-60 T 23-04-2016 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 PANTHER PTHR22572 101 298 7.9E-60 T 23-04-2016 NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 SUPERFAMILY SSF51161 31 318 2.58E-76 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS34270 72df79a5cb87980a1104e169e84b3def 349 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 8.1E-21 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 Gene3D G3DSA:2.20.25.10 10 53 3.0E-15 T 23-04-2016 NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 Gene3D G3DSA:3.30.300.20 54 144 6.4E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 PANTHER PTHR33797:SF3 9 145 1.2E-62 T 23-04-2016 NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 PANTHER PTHR33797 9 145 1.2E-62 T 23-04-2016 NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 16 143 2.1E-47 T 23-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 Pfam PF02566 OsmC-like protein 46 142 1.9E-18 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS26775 bfcf2f9470ec94faf8d92aa2241b3029 145 SUPERFAMILY SSF82784 8 143 1.7E-38 T 23-04-2016 IPR003718 OsmC/Ohr family NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PANTHER PTHR24423 5 12 8.8E-143 T 23-04-2016 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 407 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Gene3D G3DSA:3.30.565.10 255 408 7.8E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PANTHER PTHR24423:SF491 5 12 8.8E-143 T 23-04-2016 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SMART SM00387 294 410 6.6E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SUPERFAMILY SSF55874 236 408 8.25E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Pfam PF00512 His Kinase A (phospho-acceptor) domain 183 247 1.2E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SUPERFAMILY SSF52172 433 551 1.85E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PANTHER PTHR24423:SF491 161 547 8.8E-143 T 23-04-2016 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Gene3D G3DSA:3.40.50.2300 433 551 7.3E-38 T 23-04-2016 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Pfam PF00072 Response regulator receiver domain 436 547 1.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 408 4.9E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 PANTHER PTHR24423 161 547 8.8E-143 T 23-04-2016 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SMART SM00388 182 247 5.7E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SUPERFAMILY SSF47384 169 248 7.65E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 Gene3D G3DSA:1.10.287.130 174 243 7.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15080 afef9ea4fbe655233f32199be1c3228e 552 SMART SM00448 434 547 3.5E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20465 e26e8b80505aea58fdf456302039f4b8 134 Pfam PF00072 Response regulator receiver domain 14 125 8.4E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20465 e26e8b80505aea58fdf456302039f4b8 134 Gene3D G3DSA:3.40.50.2300 12 132 9.3E-28 T 23-04-2016 NIAKO_RS20465 e26e8b80505aea58fdf456302039f4b8 134 PANTHER PTHR26402 12 126 7.5E-25 T 23-04-2016 NIAKO_RS20465 e26e8b80505aea58fdf456302039f4b8 134 SMART SM00448 12 129 7.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20465 e26e8b80505aea58fdf456302039f4b8 134 SUPERFAMILY SSF52172 13 133 2.99E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15360 19b158d05dbdbee29c9e013c71ae518f 162 PANTHER PTHR34582 1 162 1.0E-25 T 23-04-2016 NIAKO_RS15360 19b158d05dbdbee29c9e013c71ae518f 162 Pfam PF04239 Protein of unknown function (DUF421) 100 162 6.5E-9 T 23-04-2016 IPR007353 Protein of unknown function DUF421 NIAKO_RS15360 19b158d05dbdbee29c9e013c71ae518f 162 Gene3D G3DSA:3.30.240.20 92 162 1.4E-13 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 Pfam PF12704 MacB-like periplasmic core domain 20 236 5.1E-17 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 Pfam PF02687 FtsX-like permease family 686 796 1.7E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 Pfam PF02687 FtsX-like permease family 298 414 4.1E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 PANTHER PTHR30572 295 364 1.2E-79 T 23-04-2016 NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 PANTHER PTHR30572 410 807 1.2E-79 T 23-04-2016 NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 PANTHER PTHR30572:SF4 295 364 1.2E-79 T 23-04-2016 NIAKO_RS09595 4019952d5521cd144ff71685a5f7bd12 807 PANTHER PTHR30572:SF4 410 807 1.2E-79 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 SUPERFAMILY SSF47781 170 234 5.34E-14 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Pfam PF12836 Helix-hairpin-helix motif 173 231 6.1E-14 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Pfam PF12836 Helix-hairpin-helix motif 90 147 3.6E-7 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Pfam PF12836 Helix-hairpin-helix motif 239 299 8.8E-16 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 PANTHER PTHR21180:SF32 6 287 5.8E-17 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Gene3D G3DSA:1.10.150.310 102 158 2.8E-5 T 23-04-2016 IPR023097 Tex RuvX-like domain NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Gene3D G3DSA:1.10.150.320 169 233 1.9E-12 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 Gene3D G3DSA:1.10.150.320 239 301 2.4E-11 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 SUPERFAMILY SSF47781 239 301 1.89E-16 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 PANTHER PTHR21180 6 287 5.8E-17 T 23-04-2016 NIAKO_RS34305 b442e20b6479abf4fc341dfdf242e724 302 SUPERFAMILY SSF47781 87 149 6.0E-9 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS33650 ad637c13e0989eb59a974e8729e0fba6 202 PANTHER PTHR23029 2 178 9.7E-22 T 23-04-2016 NIAKO_RS33650 ad637c13e0989eb59a974e8729e0fba6 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 180 1.7E-28 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS33650 ad637c13e0989eb59a974e8729e0fba6 202 SUPERFAMILY SSF53254 2 174 7.92E-35 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS33650 ad637c13e0989eb59a974e8729e0fba6 202 SMART SM00855 1 146 1.0E-12 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NIAKO_RS33650 ad637c13e0989eb59a974e8729e0fba6 202 Gene3D G3DSA:3.40.50.1240 2 180 9.7E-32 T 23-04-2016 IPR029033 Histidine phosphatase superfamily NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 425 431 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Pfam PF00702 haloacid dehalogenase-like hydrolase 419 638 4.5E-45 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 134 734 1.9E-180 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Gene3D G3DSA:2.70.150.10 183 322 1.1E-34 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 571 581 5.1E-22 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 271 285 5.1E-22 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 643 5.1E-22 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 423 437 5.1E-22 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 659 5.1E-22 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Gene3D G3DSA:3.30.70.100 5 86 1.2E-19 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 658 672 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 191 210 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 137 156 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 344 358 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 211 229 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 406 421 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 601 618 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PRINTS PR00943 Copper-transporting ATPase signature 697 711 9.1E-20 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Gene3D G3DSA:3.40.50.1000 552 692 1.7E-53 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Gene3D G3DSA:3.40.50.1000 394 437 1.7E-53 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Pfam PF00403 Heavy-metal-associated domain 7 68 2.3E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF81653 223 321 3.01E-28 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Pfam PF00122 E1-E2 ATPase 192 414 1.3E-68 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 ProSitePatterns PS01229 Hypothetical cof family signature 2. 624 646 - T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 193 703 1.4E-90 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 152 733 1.0E-187 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF55008 4 74 6.81E-18 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 PANTHER PTHR24093 7 734 1.0E-249 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF81665 162 225 3.4E-16 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF81665 322 416 3.4E-16 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF81665 673 700 3.4E-16 T 23-04-2016 NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF56784 421 442 5.5E-57 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 SUPERFAMILY SSF56784 481 731 5.5E-57 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11025 33f7a053a8a5d58db97c144a701d6e05 738 Gene3D G3DSA:3.40.1110.10 438 551 4.0E-19 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NIAKO_RS33155 9feadf20516c67e3d1094371e31ae786 357 SUPERFAMILY SSF52540 76 328 9.91E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33155 9feadf20516c67e3d1094371e31ae786 357 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 183 302 2.8E-9 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS33155 9feadf20516c67e3d1094371e31ae786 357 Gene3D G3DSA:3.40.50.300 173 309 8.3E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33155 9feadf20516c67e3d1094371e31ae786 357 SMART SM00382 179 302 0.0012 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 PANTHER PTHR23416:SF53 15 166 6.5E-47 T 23-04-2016 NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 SUPERFAMILY SSF51161 3 185 3.33E-45 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 PANTHER PTHR23416 15 166 6.5E-47 T 23-04-2016 NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 Gene3D G3DSA:2.160.10.10 2 161 3.7E-41 T 23-04-2016 NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 0.0026 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS33215 18d7f18ad97626e2a84952e15404edb7 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 48 2.6E-10 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Pfam PF00873 AcrB/AcrD/AcrF family 5 1033 1.4E-278 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82693 572 670 8.63E-6 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:3.30.70.1430 572 666 8.9E-6 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 7.8E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82714 189 271 2.09E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82693 275 332 1.62E-18 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82693 152 188 1.62E-18 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82866 298 507 3.14E-32 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82693 42 131 4.19E-20 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:1.20.1600.10 1066 1454 2.7E-58 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82866 813 1038 2.49E-52 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:3.30.70.1430 43 143 1.2E-22 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PANTHER PTHR32063:SF24 2 1079 0.0 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF56954 1049 1454 4.71E-42 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Pfam PF02321 Outer membrane efflux protein 1267 1454 2.7E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Pfam PF02321 Outer membrane efflux protein 1071 1244 1.0E-7 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1039 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:1.10.3850.10 819 1037 1.3E-56 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:1.10.3850.10 282 509 1.2E-48 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:3.30.2090.10 728 812 1.5E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 Gene3D G3DSA:3.30.2090.10 189 273 2.2E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 PANTHER PTHR32063 2 1079 0.0 T 23-04-2016 NIAKO_RS01895 a78d706bf6af0cfe32cf9abadda5e4b1 1455 SUPERFAMILY SSF82714 728 812 5.49E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 55 178 1.0E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 Gene3D G3DSA:1.10.150.240 17 85 3.8E-16 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 186 1.5E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 PANTHER PTHR18901 1 207 3.7E-60 T 23-04-2016 NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 SUPERFAMILY SSF56784 3 208 2.07E-46 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 Gene3D G3DSA:3.40.50.1000 90 214 2.3E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 Gene3D G3DSA:3.40.50.1000 1 16 2.3E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 1.6E-28 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS22875 f0b22c9dc3004bc10a98f218f8799558 218 PANTHER PTHR18901:SF34 1 207 3.7E-60 T 23-04-2016 NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 PANTHER PTHR10513:SF17 6 205 6.1E-72 T 23-04-2016 NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 SUPERFAMILY SSF52540 5 207 4.85E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 PANTHER PTHR10513 6 205 6.1E-72 T 23-04-2016 NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 PIRSF PIRSF000705 1 210 4.7E-60 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 Pfam PF01712 Deoxynucleoside kinase 10 205 7.9E-58 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain NIAKO_RS26915 6ff664ba33b44d5485cc8deca48f142b 211 Gene3D G3DSA:3.40.50.300 7 205 5.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 ProSitePatterns PS01155 Endonuclease III family signature. 101 128 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 PANTHER PTHR10359 4 260 5.1E-76 T 23-04-2016 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 PANTHER PTHR10359:SF1 4 260 5.1E-76 T 23-04-2016 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 266 6.0E-92 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Gene3D G3DSA:1.10.1670.10 122 223 3.7E-41 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Pfam PF14815 NUDIX domain 234 346 1.5E-10 T 23-04-2016 IPR029119 MutY, C-terminal NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 SUPERFAMILY SSF48150 2 222 1.73E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Pfam PF00633 Helix-hairpin-helix motif 99 126 6.3E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Gene3D G3DSA:1.10.340.30 21 121 9.4E-40 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Gene3D G3DSA:3.90.79.10 228 342 5.4E-7 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 SUPERFAMILY SSF55811 228 344 4.87E-6 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 SMART SM00478 38 189 5.1E-42 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS28515 91ddaafdd373e7f1086a86b4f9d5aedb 356 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 153 5.8E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS01615 0b10cffc67084fd7eb5a467584198edf 85 Pfam PF01541 GIY-YIG catalytic domain 1 71 2.8E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS01615 0b10cffc67084fd7eb5a467584198edf 85 Gene3D G3DSA:3.40.1440.10 3 34 1.4E-4 T 23-04-2016 IPR027299 GIY-YIG domain NIAKO_RS01615 0b10cffc67084fd7eb5a467584198edf 85 SUPERFAMILY SSF82771 1 69 3.53E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 PANTHER PTHR11019 87 226 1.2E-60 T 23-04-2016 NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 PANTHER PTHR11019 5 66 1.2E-60 T 23-04-2016 NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 Gene3D G3DSA:3.40.50.880 4 228 3.6E-84 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 Pfam PF01965 DJ-1/PfpI family 29 224 1.6E-11 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 SUPERFAMILY SSF52317 5 227 6.87E-71 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 PANTHER PTHR11019:SF97 87 226 1.2E-60 T 23-04-2016 NIAKO_RS06860 2427b888eb9691a9b4aad0d105a1c93c 239 PANTHER PTHR11019:SF97 5 66 1.2E-60 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 SUPERFAMILY SSF53706 62 640 2.49E-128 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 PIRSF PIRSF000144 10 767 0.0 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Gene3D G3DSA:3.40.50.740 126 199 3.6E-50 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Gene3D G3DSA:3.40.50.740 407 638 3.6E-50 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 PANTHER PTHR11615:SF114 287 766 2.1E-235 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 PANTHER PTHR11615:SF114 4 269 2.1E-235 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 28 764 1.7E-268 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Pfam PF01568 Molydopterin dinucleotide binding domain 653 757 8.4E-10 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 PANTHER PTHR11615 287 766 2.1E-235 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 PANTHER PTHR11615 4 269 2.1E-235 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Gene3D G3DSA:2.40.40.20 650 766 1.4E-11 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Gene3D G3DSA:3.40.228.10 200 406 2.4E-49 T 23-04-2016 NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 SUPERFAMILY SSF50692 650 766 5.2E-18 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain NIAKO_RS03445 c18926ccb8dd0c7b001670bacc8a7bb4 767 Pfam PF00384 Molybdopterin oxidoreductase 126 502 9.8E-22 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 SUPERFAMILY SSF51905 15 291 3.3E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 PANTHER PTHR13847:SF44 16 375 7.4E-47 T 23-04-2016 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 Pfam PF01266 FAD dependent oxidoreductase 16 374 1.2E-45 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 Gene3D G3DSA:3.30.9.10 245 310 3.8E-4 T 23-04-2016 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 Gene3D G3DSA:3.50.50.60 165 244 6.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 Gene3D G3DSA:3.50.50.60 337 375 6.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 Gene3D G3DSA:3.50.50.60 14 107 6.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS21505 3d3b749154e194bbf29d025a98eebd4a 377 PANTHER PTHR13847 16 375 7.4E-47 T 23-04-2016 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 SMART SM01092 181 283 3.6E-30 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 Gene3D G3DSA:3.30.43.10 1 54 3.5E-21 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 Gene3D G3DSA:3.30.465.10 58 174 2.6E-38 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 PANTHER PTHR11908:SF68 1 288 1.2E-85 T 23-04-2016 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 Gene3D G3DSA:3.30.390.50 178 288 1.5E-35 T 23-04-2016 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 SUPERFAMILY SSF56176 1 174 4.16E-58 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 174 4.8E-52 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 182 282 8.7E-26 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 SUPERFAMILY SSF55447 179 285 7.06E-30 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS25360 6918f248f476a69526c769f77efb72c4 289 PANTHER PTHR11908 1 288 1.2E-85 T 23-04-2016 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 SUPERFAMILY SSF51445 304 605 6.71E-66 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 SUPERFAMILY SSF49785 23 209 1.17E-41 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PRINTS PR00132 Glycosyl hydrolase family 2 signature 416 431 5.4E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PRINTS PR00132 Glycosyl hydrolase family 2 signature 134 149 5.4E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PRINTS PR00132 Glycosyl hydrolase family 2 signature 350 368 5.4E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PRINTS PR00132 Glycosyl hydrolase family 2 signature 318 332 5.4E-11 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Gene3D G3DSA:2.60.40.320 201 307 1.5E-14 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PANTHER PTHR10066 31 65 1.5E-94 T 23-04-2016 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 PANTHER PTHR10066 87 608 1.5E-94 T 23-04-2016 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Gene3D G3DSA:2.60.120.260 30 200 1.4E-41 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Gene3D G3DSA:3.20.20.80 310 606 1.4E-63 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 309 605 2.0E-29 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 SUPERFAMILY SSF49303 227 308 2.71E-13 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 35 209 2.3E-19 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS21575 810d2ffb2f512a4f06b63ebfd984fac4 611 Pfam PF00703 Glycosyl hydrolases family 2 218 307 1.4E-7 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 116 1115 2.4E-172 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.40.170.20 437 906 1.8E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.40.170.20 1034 1115 1.8E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.40.170.20 354 376 1.8E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.40.170.20 956 981 1.8E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Pfam PF07715 TonB-dependent Receptor Plug Domain 217 352 7.0E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 SUPERFAMILY SSF49464 116 210 5.49E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.170.130.10 208 353 3.7E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 Gene3D G3DSA:2.60.40.1120 117 207 4.5E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532:SF57 116 298 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532:SF57 676 1114 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532:SF57 423 555 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532:SF57 319 403 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532:SF57 616 651 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 329 358 1.9E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532 116 298 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532 676 1114 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532 423 555 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532 319 403 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 PANTHER PTHR11532 616 651 1.7E-136 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 SUPERFAMILY SSF56935 1034 1116 9.61E-73 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 SUPERFAMILY SSF56935 201 376 9.61E-73 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 SUPERFAMILY SSF56935 428 885 9.61E-73 T 23-04-2016 NIAKO_RS20420 5051ddf44d1c274c33237d9eb34900da 1116 SUPERFAMILY SSF56935 948 991 9.61E-73 T 23-04-2016 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 PIRSF PIRSF000077 1 99 2.1E-35 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 Gene3D G3DSA:3.40.30.10 3 98 2.1E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 TIGRFAM TIGR01068 thioredoxin: thioredoxin 3 98 5.0E-34 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 ProSitePatterns PS00194 Thioredoxin family active site. 16 34 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 Pfam PF00085 Thioredoxin 2 98 2.2E-28 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 PANTHER PTHR10438 2 99 5.0E-34 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 SUPERFAMILY SSF52833 3 98 7.43E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 PRINTS PR00421 Thioredoxin family signature 23 32 4.0E-8 T 23-04-2016 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 PRINTS PR00421 Thioredoxin family signature 15 23 4.0E-8 T 23-04-2016 NIAKO_RS06970 2b0e26c88666e8f345309e8083f04604 99 PRINTS PR00421 Thioredoxin family signature 63 74 4.0E-8 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532:SF51 341 596 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532:SF51 122 318 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532:SF51 697 1237 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 350 380 2.7E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF49464 151 233 4.84E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Pfam PF07715 TonB-dependent Receptor Plug Domain 246 374 9.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532 341 596 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532 122 318 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 PANTHER PTHR11532 697 1237 2.2E-135 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF56935 1146 1239 2.75E-66 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF56935 1021 1064 2.75E-66 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF56935 622 961 2.75E-66 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF56935 232 397 2.75E-66 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 SUPERFAMILY SSF56935 482 570 2.75E-66 T 23-04-2016 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Gene3D G3DSA:2.170.130.10 236 378 3.1E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Gene3D G3DSA:2.60.40.1120 152 235 1.6E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Gene3D G3DSA:2.40.170.20 500 560 2.9E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Gene3D G3DSA:2.40.170.20 865 961 2.9E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Gene3D G3DSA:2.40.170.20 595 832 2.9E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 152 1239 1.1E-163 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS35775 933459f03076358d0d3cdd871e79a235 1239 Pfam PF13715 CarboxypepD_reg-like domain 152 235 8.4E-16 T 23-04-2016 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 PANTHER PTHR23321 4 89 4.5E-29 T 23-04-2016 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 Gene3D G3DSA:1.10.287.10 3 90 1.1E-32 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 90 2.2E-30 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 89 2.0E-21 T 23-04-2016 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 4 90 20.375 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 SMART SM01387 8 89 1.6E-39 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 40 70 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 Pfam PF00312 Ribosomal protein S15 12 89 1.8E-29 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12985 8c0da1e007fb0a4296faad0853c5ea14 90 SUPERFAMILY SSF47060 4 90 1.74E-28 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 NIAKO_RS35670 3e9f8bc860ad364575895637f7b5f947 288 SUPERFAMILY SSF101898 44 272 1.26E-7 T 23-04-2016 NIAKO_RS35670 3e9f8bc860ad364575895637f7b5f947 288 Gene3D G3DSA:2.120.10.30 28 283 5.2E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 SUPERFAMILY SSF56059 327 473 1.05E-58 T 23-04-2016 NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 SUPERFAMILY SSF56059 25 220 1.05E-58 T 23-04-2016 NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 Pfam PF14403 Circularly permuted ATP-grasp type 2 82 458 6.0E-159 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 PANTHER PTHR34595 2 481 2.4E-275 T 23-04-2016 NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 PIRSF PIRSF005522 3 482 1.8E-219 T 23-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 NIAKO_RS31285 ca3d5283f780f94b6885fc270f72c7d6 482 PANTHER PTHR34595:SF3 2 481 2.4E-275 T 23-04-2016 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Pfam PF00072 Response regulator receiver domain 5 118 7.8E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SMART SM00388 179 247 3.2E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Gene3D G3DSA:3.40.50.2300 2 130 1.5E-31 T 23-04-2016 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 3.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 405 3.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 3.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SUPERFAMILY SSF47384 163 247 1.43E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PANTHER PTHR24423 151 405 2.0E-58 T 23-04-2016 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PANTHER PTHR24423 4 47 2.0E-58 T 23-04-2016 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SMART SM00448 3 118 3.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SUPERFAMILY SSF52172 3 154 2.85E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Gene3D G3DSA:3.30.565.10 252 405 1.0E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Gene3D G3DSA:1.10.287.130 173 243 3.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SUPERFAMILY SSF55874 237 405 2.62E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 SMART SM00387 288 405 6.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 246 5.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 405 5.2E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PANTHER PTHR24423:SF518 151 405 2.0E-58 T 23-04-2016 NIAKO_RS19445 be0502917bdb94f0dc210559729a3707 405 PANTHER PTHR24423:SF518 4 47 2.0E-58 T 23-04-2016 NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 Gene3D G3DSA:3.40.50.720 6 222 2.2E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 PANTHER PTHR10366:SF246 6 302 1.7E-142 T 23-04-2016 NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 PANTHER PTHR10366 6 302 1.7E-142 T 23-04-2016 NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 238 5.5E-78 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 306 49.08 T 23-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 NIAKO_RS33400 ac842f2b77744e0761eafd36a96eaab9 312 SUPERFAMILY SSF51735 5 307 1.26E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01021 OMPA domain signature 212 234 1.2E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01021 OMPA domain signature 242 257 1.2E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01021 OMPA domain signature 257 273 1.2E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 SUPERFAMILY SSF103088 199 312 8.63E-34 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 Pfam PF00691 OmpA family 211 306 5.7E-22 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 9.6E-9 T 23-04-2016 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 314 9.6E-9 T 23-04-2016 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 257 274 9.6E-9 T 23-04-2016 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 PANTHER PTHR30128 210 312 4.7E-38 T 23-04-2016 NIAKO_RS36725 002abb70af4f257093b53e8595ef6baf 314 Gene3D G3DSA:3.30.1330.60 203 312 3.8E-36 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 Pfam PF03301 Tryptophan 2,3-dioxygenase 7 335 4.2E-84 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 PANTHER PTHR10138 7 355 2.3E-102 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 PANTHER PTHR10138:SF0 7 355 2.3E-102 T 23-04-2016 NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 SUPERFAMILY SSF140959 248 335 2.04E-68 T 23-04-2016 NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 SUPERFAMILY SSF140959 8 194 2.04E-68 T 23-04-2016 NIAKO_RS33835 bd15cab7056fbfbfce9be0da7480c483 356 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 2 335 32.197 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 SUPERFAMILY SSF46626 485 588 2.29E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 Gene3D G3DSA:2.120.10.30 19 449 2.5E-39 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 487 566 1.6E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 SUPERFAMILY SSF50952 44 446 3.92E-12 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 PANTHER PTHR19328:SF33 44 263 5.2E-40 T 23-04-2016 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 PANTHER PTHR19328:SF33 282 445 5.2E-40 T 23-04-2016 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 Gene3D G3DSA:1.10.760.10 485 592 1.9E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 PANTHER PTHR19328 44 263 5.2E-40 T 23-04-2016 NIAKO_RS29070 96981a9cd59e2c86d1c0193fdd8d6c7d 603 PANTHER PTHR19328 282 445 5.2E-40 T 23-04-2016 NIAKO_RS16605 b495f5a87ad385be9aa0f1f68db10a5e 151 Pfam PF13271 Domain of unknown function (DUF4062) 21 112 3.4E-21 T 23-04-2016 IPR025139 Domain of unknown function DUF4062 NIAKO_RS26580 0fe2f23b3ebb2fbd9ac95921a5e56214 219 Gene3D G3DSA:3.40.50.1820 30 204 8.0E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26580 0fe2f23b3ebb2fbd9ac95921a5e56214 219 PANTHER PTHR13136 34 195 3.3E-51 T 23-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein NIAKO_RS26580 0fe2f23b3ebb2fbd9ac95921a5e56214 219 Pfam PF12695 Alpha/beta hydrolase family 94 193 1.5E-7 T 23-04-2016 IPR029059 Alpha/beta hydrolase fold-5 NIAKO_RS26580 0fe2f23b3ebb2fbd9ac95921a5e56214 219 SUPERFAMILY SSF53474 3 218 3.37E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26580 0fe2f23b3ebb2fbd9ac95921a5e56214 219 PANTHER PTHR13136:SF4 34 195 3.3E-51 T 23-04-2016 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 Gene3D G3DSA:3.50.50.60 7 75 8.9E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 Gene3D G3DSA:3.50.50.60 150 330 8.9E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 5 494 52.158 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 492 3.3E-220 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 PANTHER PTHR13847:SF214 1 446 1.3E-186 T 23-04-2016 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 494 7.8E-240 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 PANTHER PTHR13847 1 446 1.3E-186 T 23-04-2016 NIAKO_RS08970 24e6480a6fef7dfa3ee60d65cbcc5285 499 SUPERFAMILY SSF51905 5 329 8.55E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 PANTHER PTHR10196 1 472 6.9E-61 T 23-04-2016 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 SUPERFAMILY SSF53067 7 244 4.37E-43 T 23-04-2016 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 PIRSF PIRSF000538 4 481 1.9E-57 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 SUPERFAMILY SSF53067 253 473 7.18E-18 T 23-04-2016 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 Gene3D G3DSA:3.30.420.40 253 477 8.2E-13 T 23-04-2016 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 5.6E-39 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 Gene3D G3DSA:3.30.420.40 3 243 1.0E-38 T 23-04-2016 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 352 438 8.6E-8 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS17285 7ddea6f6b2eb5ecffc48900a0e9a6f97 481 PANTHER PTHR10196:SF9 1 472 6.9E-61 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 Gene3D G3DSA:2.60.40.1120 17 110 1.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 Gene3D G3DSA:2.170.130.10 111 217 2.6E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 Pfam PF13620 Carboxypeptidase regulatory-like domain 17 92 3.6E-9 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 PANTHER PTHR30069 263 360 1.1E-15 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 PANTHER PTHR30069 8 242 1.1E-15 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 PANTHER PTHR30069 409 579 1.1E-15 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 SUPERFAMILY SSF56935 109 791 2.2E-55 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 SUPERFAMILY SSF49478 17 81 4.32E-10 T 23-04-2016 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 Gene3D G3DSA:2.40.170.20 218 791 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10710 dd2b956be16863f264e806d9929db95b 820 Pfam PF14905 Outer membrane protein beta-barrel family 382 789 1.6E-110 T 23-04-2016 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 SUPERFAMILY SSF48452 31 156 4.27E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Gene3D G3DSA:3.30.1330.60 556 665 5.7E-28 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Gene3D G3DSA:1.25.40.10 31 151 7.2E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 PRINTS PR01021 OMPA domain signature 604 620 1.4E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 PRINTS PR01021 OMPA domain signature 589 604 1.4E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 PRINTS PR01021 OMPA domain signature 559 581 1.4E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Pfam PF00691 OmpA family 558 658 2.3E-16 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 SUPERFAMILY SSF49464 454 524 5.89E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 SUPERFAMILY SSF103088 555 664 2.35E-26 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 PANTHER PTHR30128 557 664 1.1E-28 T 23-04-2016 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Pfam PF07676 WD40-like Beta Propeller Repeat 353 389 3.4E-5 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Pfam PF07676 WD40-like Beta Propeller Repeat 300 335 1.5E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Gene3D G3DSA:2.130.10.10 192 388 6.2E-12 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Pfam PF13620 Carboxypeptidase regulatory-like domain 455 527 5.7E-9 T 23-04-2016 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 SUPERFAMILY SSF82171 225 399 3.14E-11 T 23-04-2016 NIAKO_RS07310 c6e4a761d8eff572a461495338e7f2f0 667 Gene3D G3DSA:2.60.40.1120 455 527 2.1E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 104 1.6E-24 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 225 1.5E-12 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 SUPERFAMILY SSF101386 136 232 1.07E-25 T 23-04-2016 NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 TIGRFAM TIGR00444 mazG: MazG family protein 19 256 2.3E-82 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 SUPERFAMILY SSF101386 14 109 4.22E-22 T 23-04-2016 NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 PANTHER PTHR30522 11 262 2.2E-109 T 23-04-2016 NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 Gene3D G3DSA:1.10.287.1080 132 221 3.3E-17 T 23-04-2016 NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 Gene3D G3DSA:1.10.287.1080 23 77 8.8E-9 T 23-04-2016 NIAKO_RS02800 d75b3729b1545f90a522d7ee48d382dc 262 PANTHER PTHR30522:SF0 11 262 2.2E-109 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 PANTHER PTHR11019 10 116 3.3E-30 T 23-04-2016 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 PANTHER PTHR11019:SF11 10 116 3.3E-30 T 23-04-2016 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 Gene3D G3DSA:1.10.10.60 62 116 4.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 SUPERFAMILY SSF46689 62 110 7.89E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 Pfam PF12833 Helix-turn-helix domain 31 109 1.3E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 SMART SM00342 25 108 9.7E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 Gene3D G3DSA:1.10.10.60 9 61 3.6E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10365 ae092612da001e1a86614a09dae78d9b 138 SUPERFAMILY SSF46689 9 59 3.94E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 Gene3D G3DSA:3.10.350.10 2 46 5.1E-9 T 23-04-2016 IPR018392 LysM domain NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 SUPERFAMILY SSF54001 56 211 4.91E-8 T 23-04-2016 NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 SUPERFAMILY SSF54106 2 45 3.53E-6 T 23-04-2016 IPR018392 LysM domain NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 SMART SM00257 2 45 0.0043 T 23-04-2016 IPR018392 LysM domain NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 Pfam PF05257 CHAP domain 98 177 2.8E-7 T 23-04-2016 IPR007921 CHAP domain NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 Gene3D G3DSA:3.90.1720.10 60 196 3.5E-10 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS12430 be8b46f5244559a0797399331949b734 217 Pfam PF01476 LysM domain 3 45 2.2E-4 T 23-04-2016 IPR018392 LysM domain NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 Pfam PF02610 L-arabinose isomerase 78 352 3.7E-14 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 PANTHER PTHR38464 3 476 7.5E-104 T 23-04-2016 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 PANTHER PTHR38464:SF1 3 476 7.5E-104 T 23-04-2016 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 Pfam PF02952 L-fucose isomerase, C-terminal domain 365 474 1.4E-7 T 23-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 SUPERFAMILY SSF50443 333 477 1.18E-34 T 23-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 Gene3D G3DSA:3.20.14.10 340 474 3.1E-18 T 23-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 269 5.0E-8 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS03465 fe847af42e0dabb17a3d94fb2ecdf1b9 477 SUPERFAMILY SSF53743 1 336 2.75E-74 T 23-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 PANTHER PTHR24221 165 742 1.1E-150 T 23-04-2016 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 SMART SM00382 523 709 2.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Pfam PF00664 ABC transporter transmembrane region 184 448 2.6E-22 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 SUPERFAMILY SSF90123 167 482 7.46E-53 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 ProSitePatterns PS00211 ABC transporters family signature. 635 649 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Gene3D G3DSA:3.90.70.10 18 133 2.1E-12 T 23-04-2016 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Pfam PF03412 Peptidase C39 family 20 136 1.0E-15 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Gene3D G3DSA:3.40.50.300 495 728 7.5E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Gene3D G3DSA:1.20.1560.10 169 478 2.0E-59 T 23-04-2016 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 Pfam PF00005 ABC transporter 514 663 3.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS11445 bd4e593825253a2e8d623cbc2575f692 748 SUPERFAMILY SSF52540 486 734 3.42E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 PANTHER PTHR11699:SF10 1 486 1.5E-117 T 23-04-2016 NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 Gene3D G3DSA:3.40.309.10 233 421 2.4E-50 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 PANTHER PTHR11699 1 486 1.5E-117 T 23-04-2016 NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 SUPERFAMILY SSF53720 4 484 1.57E-91 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 Pfam PF00171 Aldehyde dehydrogenase family 3 422 4.0E-44 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS12695 b2a6338143f9c3b4d6c3f26da681a61c 493 Gene3D G3DSA:3.40.605.10 3 232 1.5E-39 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 PANTHER PTHR34134 1 123 2.0E-31 T 23-04-2016 NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 Gene3D G3DSA:1.10.10.10 1 75 3.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 PANTHER PTHR34134:SF1 1 123 2.0E-31 T 23-04-2016 NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 PIRSF PIRSF019455 1 123 8.3E-32 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 SUPERFAMILY SSF46785 1 119 5.03E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04425 16846b368d1b688e5cc07ff08ce1a24f 123 Pfam PF03965 Penicillinase repressor 4 116 3.3E-30 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 SMART SM00850 169 260 2.6E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 PANTHER PTHR26402 6 132 1.2E-20 T 23-04-2016 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 Pfam PF04397 LytTr DNA-binding domain 171 258 9.2E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 Gene3D G3DSA:2.40.50.40 161 228 2.8E-19 T 23-04-2016 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 Gene3D G3DSA:3.40.50.2300 2 130 2.9E-26 T 23-04-2016 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 SUPERFAMILY SSF52172 5 134 1.22E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 SMART SM00448 6 118 2.9E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS27295 dddabc909cdb4fc39f1b54cee74b0da6 262 Pfam PF00072 Response regulator receiver domain 8 118 1.9E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 PANTHER PTHR30294 4 365 1.9E-38 T 23-04-2016 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 Pfam PF12698 ABC-2 family transporter protein 29 358 7.5E-23 T 23-04-2016 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 252 276 3.5E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 167 189 3.5E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 289 308 3.5E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS04645 17dcd79c52c180562f8093bc61f38438 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 309 328 3.5E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SUPERFAMILY SSF69318 466 529 3.53E-71 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SUPERFAMILY SSF69318 76 430 3.53E-71 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 PANTHER PTHR16026 446 603 6.4E-23 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 PANTHER PTHR16026 82 355 6.4E-23 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 PANTHER PTHR16026 383 428 6.4E-23 T 23-04-2016 IPR027039 Cartilage acidic protein 1 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Gene3D G3DSA:2.130.10.130 670 916 1.7E-22 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Gene3D G3DSA:2.130.10.130 1003 1085 1.2E-4 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Gene3D G3DSA:2.130.10.130 39 209 1.8E-14 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Gene3D G3DSA:2.130.10.130 247 429 8.0E-24 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Gene3D G3DSA:2.130.10.130 471 530 8.0E-24 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF07593 ASPIC and UnbV 552 618 4.3E-16 T 23-04-2016 IPR011519 ASPIC/UnbV NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SMART SM00191 1025 1088 53.0 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SMART SM00191 130 172 220.0 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SMART SM00191 78 126 88.0 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SMART SM00191 668 717 1.6 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SUPERFAMILY SSF69318 1009 1114 2.35E-7 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SUPERFAMILY SSF69318 472 539 1.44E-54 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 SUPERFAMILY SSF69318 651 919 1.44E-54 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 472 516 7.1E-7 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 792 863 5.6E-8 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 90 153 2.3E-13 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 279 341 5.2E-16 T 23-04-2016 NIAKO_RS29745 593d24ec79c94b6b6cd72215e5b2eff2 1127 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 680 744 5.4E-9 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 1.9E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 238 8.7E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Pfam PF13715 CarboxypepD_reg-like domain 25 104 4.9E-15 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1063 2.1E-165 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Gene3D G3DSA:2.40.170.20 865 907 4.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Gene3D G3DSA:2.40.170.20 357 427 4.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Gene3D G3DSA:2.40.170.20 466 818 4.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF56935 970 1063 2.09E-67 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF56935 487 816 2.09E-67 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF56935 349 437 2.09E-67 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF56935 101 261 2.09E-67 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF56935 874 917 2.09E-67 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Gene3D G3DSA:2.60.40.1120 24 102 1.7E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532 205 459 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532 611 1061 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532 554 582 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532 1 186 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 Gene3D G3DSA:2.170.130.10 103 242 5.8E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532:SF51 205 459 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532:SF51 611 1061 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532:SF51 554 582 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 PANTHER PTHR11532:SF51 1 186 1.3E-164 T 23-04-2016 NIAKO_RS00860 c21538a4a12d2df4128dbbcf0f0d8815 1063 SUPERFAMILY SSF49464 24 82 5.89E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24035 e73d121381506f256431754665cbfaab 334 Pfam PF01384 Phosphate transporter family 164 323 1.6E-49 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS24035 e73d121381506f256431754665cbfaab 334 Pfam PF01384 Phosphate transporter family 18 156 1.7E-34 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS24035 e73d121381506f256431754665cbfaab 334 PANTHER PTHR11101 1 330 3.3E-77 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 Pfam PF02381 MraZ protein, putative antitoxin-like 79 144 3.2E-17 T 23-04-2016 IPR020603 MraZ domain NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 Pfam PF02381 MraZ protein, putative antitoxin-like 4 76 1.6E-13 T 23-04-2016 IPR020603 MraZ domain NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 145 1.0E-26 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 4 145 5.3E-40 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 153 40.972 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 SUPERFAMILY SSF89447 1 134 6.8E-38 T 23-04-2016 NIAKO_RS35985 26adaa1b070b8ec325407ff3c4db1ce7 153 PANTHER PTHR34701 4 150 9.5E-41 T 23-04-2016 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 SUPERFAMILY SSF48179 199 296 6.46E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 291 4.3E-39 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Gene3D G3DSA:3.40.50.720 230 433 4.8E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 SUPERFAMILY SSF52413 303 427 1.44E-36 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 PANTHER PTHR11374:SF18 1 437 6.5E-243 T 23-04-2016 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 PIRSF PIRSF500134 1 435 2.0E-184 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 4.6E-65 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Gene3D G3DSA:3.40.50.720 1 201 3.3E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Gene3D G3DSA:1.20.5.100 202 229 2.1E-20 T 23-04-2016 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 PIRSF PIRSF000124 1 432 2.7E-147 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 SMART SM00984 315 417 4.6E-46 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 PANTHER PTHR11374 1 437 6.5E-243 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 SUPERFAMILY SSF51735 1 188 1.53E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 416 2.2E-30 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS24690 e757d909ff7f8c0ebe1f768e47afc529 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 413 2.5E-140 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS15965 19147a5c883023c046d5f01143432b27 755 Gene3D G3DSA:1.10.575.10 378 676 7.3E-19 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS15965 19147a5c883023c046d5f01143432b27 755 SUPERFAMILY SSF48537 376 470 4.19E-11 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS15965 19147a5c883023c046d5f01143432b27 755 SUPERFAMILY SSF48537 504 578 4.19E-11 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS03400 a277367cc5c4487b50487ea47b7f273c 400 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 19 391 2.5E-86 T 23-04-2016 IPR018721 Protein of unknown function DUF2252 NIAKO_RS03400 a277367cc5c4487b50487ea47b7f273c 400 PANTHER PTHR39441 6 396 1.4E-46 T 23-04-2016 NIAKO_RS16760 202e385c4830e25efccbee789611b84b 304 SMART SM00400 32 85 0.003 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS16760 202e385c4830e25efccbee789611b84b 304 Gene3D G3DSA:3.40.1360.10 199 297 4.2E-6 T 23-04-2016 NIAKO_RS16760 202e385c4830e25efccbee789611b84b 304 SUPERFAMILY SSF57783 5 94 9.35E-12 T 23-04-2016 NIAKO_RS16760 202e385c4830e25efccbee789611b84b 304 Gene3D G3DSA:3.90.580.10 3 94 1.9E-13 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS16760 202e385c4830e25efccbee789611b84b 304 Pfam PF01807 CHC2 zinc finger 7 75 8.3E-7 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 SUPERFAMILY SSF52540 320 459 8.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:1.20.1580.10 285 367 1.3E-30 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:1.20.1580.10 593 719 3.2E-49 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:1.20.1580.10 104 164 1.3E-30 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 SUPERFAMILY SSF52540 152 286 8.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 SUPERFAMILY SSF52540 15 98 8.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 PANTHER PTHR32282 573 837 0.0 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 PANTHER PTHR32282 11 549 0.0 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:3.40.50.300 368 487 3.8E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:3.40.50.300 720 837 3.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:3.40.50.300 491 566 3.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:3.40.50.300 12 62 3.8E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Gene3D G3DSA:1.10.8.280 165 284 2.7E-23 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 SUPERFAMILY SSF52540 505 547 2.08E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 Pfam PF00005 ABC transporter 510 759 2.8E-8 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 SUPERFAMILY SSF52540 583 810 2.08E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 PANTHER PTHR32282:SF4 573 837 0.0 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 PANTHER PTHR32282:SF4 11 549 0.0 T 23-04-2016 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 138 824 2.0E-224 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 ProSitePatterns PS00211 ABC transporters family signature. 377 391 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS16085 6ad15b229e7594b81093c47918636fb5 839 ProSitePatterns PS00211 ABC transporters family signature. 729 743 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS23855 65cd20f93d09fa13454bccbcf5a80bb4 68 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 3 66 6.4E-11 T 23-04-2016 NIAKO_RS23855 65cd20f93d09fa13454bccbcf5a80bb4 68 SUPERFAMILY SSF51735 2 67 5.49E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23855 65cd20f93d09fa13454bccbcf5a80bb4 68 Gene3D G3DSA:3.40.50.720 3 66 2.3E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26575 5300b0225b9f9452cf370bffd5787f71 802 SUPERFAMILY SSF101898 79 296 1.39E-12 T 23-04-2016 NIAKO_RS26575 5300b0225b9f9452cf370bffd5787f71 802 Pfam PF13573 SprB repeat 563 589 3.9E-4 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS26575 5300b0225b9f9452cf370bffd5787f71 802 Pfam PF13573 SprB repeat 483 510 1.5E-7 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS26575 5300b0225b9f9452cf370bffd5787f71 802 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 715 802 1.6E-15 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS26575 5300b0225b9f9452cf370bffd5787f71 802 Pfam PF13585 C-terminal domain of CHU protein family 715 797 3.0E-19 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 762 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 SUPERFAMILY SSF51726 2 397 4.06E-108 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 Gene3D G3DSA:3.20.20.210 1 393 6.9E-147 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 PANTHER PTHR30519 1 767 0.0 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 Gene3D G3DSA:3.20.20.210 396 762 4.0E-132 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 436 757 5.6E-154 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 PANTHER PTHR30519:SF0 1 767 0.0 T 23-04-2016 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 321 6.2E-118 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 762 36.62 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 PIRSF PIRSF000382 1 767 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NIAKO_RS26990 6f89dc0b46891ef59f1dc719592752f2 769 SUPERFAMILY SSF51726 400 761 4.32E-119 T 23-04-2016 NIAKO_RS37480 0c45da3ccd0cc8f66308e6cd7992e4f9 247 PANTHER PTHR24567 65 245 7.5E-32 T 23-04-2016 NIAKO_RS37480 0c45da3ccd0cc8f66308e6cd7992e4f9 247 PANTHER PTHR24567:SF33 65 245 7.5E-32 T 23-04-2016 NIAKO_RS37480 0c45da3ccd0cc8f66308e6cd7992e4f9 247 Gene3D G3DSA:2.60.120.10 60 189 7.5E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS37480 0c45da3ccd0cc8f66308e6cd7992e4f9 247 SUPERFAMILY SSF51206 66 190 4.32E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS37480 0c45da3ccd0cc8f66308e6cd7992e4f9 247 Pfam PF00027 Cyclic nucleotide-binding domain 82 166 1.3E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS02475 d05f6204f4b12cbfdf7bfd0aa37d5a3d 146 Gene3D G3DSA:3.40.50.1820 1 146 1.2E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03125 99bd0acaf3c17e1fab8e9f81b7e4b6bb 135 SUPERFAMILY SSF48695 27 133 6.83E-18 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS03125 99bd0acaf3c17e1fab8e9f81b7e4b6bb 135 Pfam PF02276 Photosynthetic reaction centre cytochrome C subunit 33 132 4.8E-11 T 23-04-2016 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 NIAKO_RS03125 99bd0acaf3c17e1fab8e9f81b7e4b6bb 135 Gene3D G3DSA:1.10.468.10 31 132 7.1E-24 T 23-04-2016 IPR023119 Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 Pfam PF06580 Histidine kinase 736 815 5.6E-20 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 Pfam PF07495 Y_Y_Y domain 625 685 1.3E-9 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 PANTHER PTHR34220:SF2 689 884 2.6E-31 T 23-04-2016 NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 SUPERFAMILY SSF55874 792 894 6.74E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 SUPERFAMILY SSF50998 266 571 1.26E-9 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 SUPERFAMILY SSF63829 218 321 8.17E-7 T 23-04-2016 NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 SUPERFAMILY SSF63829 40 147 8.17E-7 T 23-04-2016 NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 Pfam PF07494 Two component regulator propeller 37 59 8.8E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 PANTHER PTHR34220 689 884 2.6E-31 T 23-04-2016 NIAKO_RS32630 f8533805eb251e6e75491b8e3fcf7e94 952 Gene3D G3DSA:3.30.565.10 784 943 7.6E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 PIRSF PIRSF001439 1 321 2.9E-48 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 19 312 4.0E-29 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 PANTHER PTHR13812 1 321 2.5E-32 T 23-04-2016 NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 SUPERFAMILY SSF51735 1 320 5.27E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 Gene3D G3DSA:3.40.50.720 143 295 1.4E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 PANTHER PTHR13812:SF19 1 321 2.5E-32 T 23-04-2016 NIAKO_RS11490 63fb33fd47d1d768945664fd93a41025 321 Gene3D G3DSA:3.30.1780.10 1 142 4.8E-35 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 389 463 9.2E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 SUPERFAMILY SSF81296 101 171 7.77E-11 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 SUPERFAMILY SSF81296 283 349 1.54E-9 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Gene3D G3DSA:2.60.40.10 101 177 1.4E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Gene3D G3DSA:2.60.40.10 15 91 1.5E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Gene3D G3DSA:2.60.40.10 189 264 1.9E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Gene3D G3DSA:2.60.40.10 283 353 8.8E-10 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 SUPERFAMILY SSF81296 189 261 8.12E-12 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Pfam PF01833 IPT/TIG domain 16 81 1.2E-4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Pfam PF01833 IPT/TIG domain 190 260 4.6E-7 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 Pfam PF01833 IPT/TIG domain 102 165 3.5E-5 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS33500 072e0abb6b82818274d9c81f5b9d011d 463 SUPERFAMILY SSF81296 15 87 2.24E-11 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS04220 040eeb1a3716501e347d9af41f84f19d 217 SUPERFAMILY SSF55469 17 216 3.14E-43 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS04220 040eeb1a3716501e347d9af41f84f19d 217 Gene3D G3DSA:3.40.109.10 17 214 5.2E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS04220 040eeb1a3716501e347d9af41f84f19d 217 PANTHER PTHR23026 19 217 1.6E-26 T 23-04-2016 NIAKO_RS04220 040eeb1a3716501e347d9af41f84f19d 217 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 11 211 1.0E-68 T 23-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 NIAKO_RS04220 040eeb1a3716501e347d9af41f84f19d 217 Pfam PF00881 Nitroreductase family 23 187 2.6E-28 T 23-04-2016 IPR029479 Nitroreductase NIAKO_RS28915 d1375861bc3deb3ccee988dca9ef74e7 313 PANTHER PTHR16222 6 311 4.4E-58 T 23-04-2016 NIAKO_RS28915 d1375861bc3deb3ccee988dca9ef74e7 313 SUPERFAMILY SSF101478 6 309 2.48E-68 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS28915 d1375861bc3deb3ccee988dca9ef74e7 313 Pfam PF03747 ADP-ribosylglycohydrolase 8 288 6.3E-65 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS28915 d1375861bc3deb3ccee988dca9ef74e7 313 PANTHER PTHR16222:SF12 6 311 4.4E-58 T 23-04-2016 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Gene3D G3DSA:3.30.1360.40 244 341 6.3E-31 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Gene3D G3DSA:3.90.199.10 38 243 2.6E-120 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Gene3D G3DSA:3.90.199.10 342 407 2.6E-120 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 481 7.8E-152 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 16 823 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 674 720 2.7E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 625 663 9.8E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 566 610 6.7E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 778 820 3.3E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 727 773 5.0E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 513 559 1.8E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 SUPERFAMILY SSF56719 38 496 2.35E-170 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Gene3D G3DSA:2.120.10.90 506 823 4.2E-117 T 23-04-2016 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 PANTHER PTHR10169 8 791 0.0 T 23-04-2016 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 SUPERFAMILY SSF101904 508 835 3.66E-98 T 23-04-2016 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 PANTHER PTHR10169:SF48 8 791 0.0 T 23-04-2016 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 SMART SM00434 19 474 7.3E-250 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS10160 df88067f0c48072eb6a9078665e0f649 881 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 9 827 28.303 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 Pfam PF01642 Methylmalonyl-CoA mutase 360 930 4.8E-135 T 23-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 SUPERFAMILY SSF51703 567 932 9.68E-144 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 SUPERFAMILY SSF51703 312 497 9.68E-144 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 Gene3D G3DSA:3.40.50.300 1 203 4.1E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 Gene3D G3DSA:3.20.20.240 354 497 8.3E-192 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 Gene3D G3DSA:3.20.20.240 567 932 8.3E-192 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 PANTHER PTHR23408 568 936 7.3E-219 T 23-04-2016 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 PANTHER PTHR23408 274 498 7.3E-219 T 23-04-2016 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 SUPERFAMILY SSF52540 1 216 5.31E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 PANTHER PTHR23408:SF1 568 936 7.3E-219 T 23-04-2016 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 PANTHER PTHR23408:SF1 274 498 7.3E-219 T 23-04-2016 NIAKO_RS32995 e513b259271565eea8c9cb12d78b90f5 936 Pfam PF03308 ArgK protein 1 203 8.0E-40 T 23-04-2016 NIAKO_RS10425 f138dc019ab51e748150e77519698d1d 250 Pfam PF00691 OmpA family 134 231 1.4E-16 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10425 f138dc019ab51e748150e77519698d1d 250 PANTHER PTHR30329:SF4 90 237 1.4E-27 T 23-04-2016 NIAKO_RS10425 f138dc019ab51e748150e77519698d1d 250 Gene3D G3DSA:3.30.1330.60 114 237 8.4E-29 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10425 f138dc019ab51e748150e77519698d1d 250 SUPERFAMILY SSF103088 116 237 1.14E-26 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10425 f138dc019ab51e748150e77519698d1d 250 PANTHER PTHR30329 90 237 1.4E-27 T 23-04-2016 NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 SUPERFAMILY SSF52467 3 226 4.67E-62 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Gene3D G3DSA:3.30.1600.10 23 59 1.3E-17 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Gene3D G3DSA:3.30.1600.10 107 149 1.3E-17 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Gene3D G3DSA:3.40.50.1220 154 227 6.6E-35 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Gene3D G3DSA:3.40.50.1220 71 106 6.6E-35 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Gene3D G3DSA:3.40.50.1220 2 22 6.6E-35 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 PANTHER PTHR11085 2 226 8.7E-57 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 4 228 51.388 T 23-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 Pfam PF02146 Sir2 family 11 178 1.3E-40 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 NIAKO_RS10120 fd1f8abc21ec7d5727b8763b47478584 228 PANTHER PTHR11085:SF17 2 226 8.7E-57 T 23-04-2016 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 5.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.1E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Gene3D G3DSA:3.10.20.30 270 365 9.2E-50 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Pfam PF01926 50S ribosome-binding GTPase 5 123 6.2E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PIRSF PIRSF006641 1 365 4.5E-154 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 PANTHER PTHR23305 1 365 9.5E-189 T 23-04-2016 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Gene3D G3DSA:3.40.50.300 201 269 3.5E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Gene3D G3DSA:3.40.50.300 4 131 3.5E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 365 6.5E-147 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 7.1E-41 T 23-04-2016 IPR013029 Domain of unknown function DUF933 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 42.498 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 SUPERFAMILY SSF52540 4 303 1.19E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 SUPERFAMILY SSF81271 281 362 4.8E-37 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NIAKO_RS05970 d6e8381b00a119d702ae519309e44d53 365 Gene3D G3DSA:1.10.150.300 132 200 5.8E-24 T 23-04-2016 IPR023192 TGS-like domain NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 Gene3D G3DSA:1.10.10.10 111 171 3.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 171 2.1E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 Pfam PF08281 Sigma-70, region 4 119 170 1.0E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 PANTHER PTHR30173 5 192 1.2E-35 T 23-04-2016 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 SUPERFAMILY SSF88946 5 98 1.18E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 SUPERFAMILY SSF88659 121 171 7.41E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 Pfam PF04542 Sigma-70 region 2 31 89 1.0E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS17435 43849fff414caa388e6c859a9cbd55cd 194 Gene3D G3DSA:1.10.1740.10 8 89 2.1E-18 T 23-04-2016 NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 SUPERFAMILY SSF51445 12 335 5.93E-74 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 PANTHER PTHR19328 32 168 1.9E-30 T 23-04-2016 NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 Gene3D G3DSA:3.20.20.80 25 329 4.5E-90 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 157 166 - T 23-04-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 Pfam PF00754 F5/8 type C domain 347 463 8.0E-20 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 PANTHER PTHR19328:SF13 32 168 1.9E-30 T 23-04-2016 NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 Gene3D G3DSA:2.60.120.260 346 465 2.4E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 675 752 5.4E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 SUPERFAMILY SSF49785 345 465 2.13E-23 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17365 ecbfcd953984fd44dfb791ae819c8812 752 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 295 1.5E-48 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 18 240 4.4E-66 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 3 247 6.2E-98 T 23-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 SUPERFAMILY SSF52540 49 236 2.13E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 PIRSF PIRSF028756 2 249 5.8E-71 T 23-04-2016 IPR016898 Polyphosphate kinase 2 NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 PANTHER PTHR34383 14 248 1.5E-94 T 23-04-2016 NIAKO_RS28090 d3c7a61ae32e5578c15952b7f363b15b 249 Gene3D G3DSA:3.40.50.300 4 246 3.2E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37245 052a2b72c4803100213a17815bf5f5af 355 Pfam PF02397 Bacterial sugar transferase 184 322 1.8E-33 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS37245 052a2b72c4803100213a17815bf5f5af 355 PANTHER PTHR30576 182 313 1.3E-39 T 23-04-2016 NIAKO_RS31835 953d4e17a4ef8e34ddabda61624b05a5 483 PANTHER PTHR34856 28 455 7.3E-201 T 23-04-2016 NIAKO_RS31835 953d4e17a4ef8e34ddabda61624b05a5 483 PANTHER PTHR34856:SF1 28 455 7.3E-201 T 23-04-2016 NIAKO_RS31835 953d4e17a4ef8e34ddabda61624b05a5 483 Pfam PF03916 Polysulphide reductase, NrfD 71 399 2.6E-22 T 23-04-2016 IPR005614 NrfD family NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 PANTHER PTHR17224 4 186 1.4E-56 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 185 2.4E-48 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 SUPERFAMILY SSF53178 2 185 7.85E-52 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 Pfam PF01195 Peptidyl-tRNA hydrolase 4 183 7.2E-52 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 Gene3D G3DSA:3.40.50.1470 2 186 8.7E-60 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 178 28.147 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 PANTHER PTHR17224:SF1 4 186 1.4E-56 T 23-04-2016 NIAKO_RS00900 17079ef88fe4fc3217fad1ddec7175a7 191 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 SUPERFAMILY SSF82679 7 105 2.09E-24 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 Gene3D G3DSA:2.30.30.30 108 151 2.4E-6 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 PANTHER PTHR30265 7 148 8.6E-27 T 23-04-2016 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 SUPERFAMILY SSF50104 108 164 2.19E-7 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 SMART SM00738 6 103 3.3E-9 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 Pfam PF02357 Transcription termination factor nusG 7 99 5.5E-20 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 Pfam PF00467 KOW motif 119 149 3.4E-5 T 23-04-2016 IPR005824 KOW NIAKO_RS33200 5775401bcc97041c1b187a2716c37e2e 169 Gene3D G3DSA:3.30.70.940 7 103 1.1E-14 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 Pfam PF00085 Thioredoxin 3 104 4.0E-33 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 104 3.7E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 PIRSF PIRSF000077 1 105 1.3E-39 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 PRINTS PR00421 Thioredoxin family signature 29 38 2.4E-6 T 23-04-2016 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 PRINTS PR00421 Thioredoxin family signature 69 80 2.4E-6 T 23-04-2016 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 PRINTS PR00421 Thioredoxin family signature 21 29 2.4E-6 T 23-04-2016 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 PANTHER PTHR10438 1 105 3.9E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 SUPERFAMILY SSF52833 3 105 5.91E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS05050 03f5d190742815b5548592e22d1198be 105 Gene3D G3DSA:3.40.30.10 3 104 3.9E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 Gene3D G3DSA:1.10.10.10 116 177 1.2E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 Gene3D G3DSA:1.10.1740.10 6 102 8.7E-11 T 23-04-2016 NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 PANTHER PTHR30173 1 196 2.3E-24 T 23-04-2016 NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 SUPERFAMILY SSF88946 6 91 5.49E-10 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 PANTHER PTHR30173:SF20 1 196 2.3E-24 T 23-04-2016 NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 SUPERFAMILY SSF88659 95 178 6.73E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13400 09bda7f016a4c0d9ded1bef97b08b3e2 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 174 1.5E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 SUPERFAMILY SSF47203 240 388 2.26E-41 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Gene3D G3DSA:2.40.110.10 136 228 1.8E-32 T 23-04-2016 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 228 1.0E-21 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 SUPERFAMILY SSF56645 9 239 1.44E-76 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 3.6E-33 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Gene3D G3DSA:1.10.540.10 10 134 4.3E-41 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 133 2.5E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 PANTHER PTHR10909 11 394 1.0E-185 T 23-04-2016 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 PANTHER PTHR10909:SF152 11 394 1.0E-185 T 23-04-2016 NIAKO_RS22295 e0d482e15de153b2bdb1c858e65fe763 394 Gene3D G3DSA:1.20.140.10 229 389 5.7E-47 T 23-04-2016 NIAKO_RS18550 d9f788ca2a4212d81b6e4c37e7ee5b0c 521 PANTHER PTHR11819 4 501 2.2E-130 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS18550 d9f788ca2a4212d81b6e4c37e7ee5b0c 521 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 427 5.2E-90 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS18550 d9f788ca2a4212d81b6e4c37e7ee5b0c 521 PANTHER PTHR11819:SF7 4 501 2.2E-130 T 23-04-2016 NIAKO_RS18550 d9f788ca2a4212d81b6e4c37e7ee5b0c 521 Pfam PF00474 Sodium:solute symporter family 36 428 2.7E-68 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS29865 57e7b8b04099fa23726104a5dc8697fb 229 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 147 223 3.4E-22 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 NIAKO_RS29865 57e7b8b04099fa23726104a5dc8697fb 229 SUPERFAMILY SSF53335 24 222 6.01E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS29865 57e7b8b04099fa23726104a5dc8697fb 229 PANTHER PTHR39963 1 224 3.4E-28 T 23-04-2016 NIAKO_RS29865 57e7b8b04099fa23726104a5dc8697fb 229 Gene3D G3DSA:3.40.50.150 7 224 5.5E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 PANTHER PTHR33516 29 144 2.5E-34 T 23-04-2016 NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 95 107 9.3E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 56 66 9.3E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 67 78 9.3E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 SUPERFAMILY SSF51306 27 142 4.36E-30 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 PANTHER PTHR33516:SF1 29 144 2.5E-34 T 23-04-2016 NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 Gene3D G3DSA:2.10.109.10 29 144 6.2E-39 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS33080 f6da646399a55e82de88119ea92e18f0 144 Pfam PF00717 Peptidase S24-like 59 125 3.8E-11 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 SUPERFAMILY SSF82171 232 446 2.09E-37 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 SUPERFAMILY SSF82171 28 180 2.09E-37 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 PANTHER PTHR11731 348 715 3.7E-93 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 PANTHER PTHR11731 1 302 3.7E-93 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Pfam PF00326 Prolyl oligopeptidase family 505 715 1.5E-43 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Gene3D G3DSA:3.40.50.1820 396 714 8.7E-71 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Gene3D G3DSA:2.120.10.30 227 395 1.9E-44 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Gene3D G3DSA:2.120.10.30 38 150 1.9E-44 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Pfam PF07676 WD40-like Beta Propeller Repeat 82 115 3.3E-8 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 Pfam PF07676 WD40-like Beta Propeller Repeat 312 325 0.22 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 PANTHER PTHR11731:SF90 348 715 3.7E-93 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 PANTHER PTHR11731:SF90 1 302 3.7E-93 T 23-04-2016 NIAKO_RS32045 b1a44a3d5310bcb241e2a985dffe6424 715 SUPERFAMILY SSF53474 455 714 9.53E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS16895 e8a889cb577499271caada285cf36471 182 Gene3D G3DSA:3.40.630.30 8 168 1.9E-11 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS16895 e8a889cb577499271caada285cf36471 182 Pfam PF00583 Acetyltransferase (GNAT) family 61 162 5.4E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS16895 e8a889cb577499271caada285cf36471 182 SUPERFAMILY SSF55729 8 175 5.23E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 SUPERFAMILY SSF52540 224 655 1.27E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 Gene3D G3DSA:3.40.50.300 444 656 2.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 Gene3D G3DSA:3.40.50.300 180 297 2.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 PANTHER PTHR37937 219 574 3.3E-19 T 23-04-2016 NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 211 590 2.4E-57 T 23-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 NIAKO_RS16695 2f24e84ce3bd9b7bea2a5643e79e0385 670 PANTHER PTHR37937:SF1 219 574 3.3E-19 T 23-04-2016 NIAKO_RS25345 af6ded8d6eb7365ca582bfe58e40aa6e 176 PANTHER PTHR38588:SF1 4 156 3.2E-25 T 23-04-2016 NIAKO_RS25345 af6ded8d6eb7365ca582bfe58e40aa6e 176 Gene3D G3DSA:3.30.530.20 5 153 2.3E-41 T 23-04-2016 IPR023393 START-like domain NIAKO_RS25345 af6ded8d6eb7365ca582bfe58e40aa6e 176 SUPERFAMILY SSF55961 5 149 1.01E-31 T 23-04-2016 NIAKO_RS25345 af6ded8d6eb7365ca582bfe58e40aa6e 176 PANTHER PTHR38588 4 156 3.2E-25 T 23-04-2016 NIAKO_RS25345 af6ded8d6eb7365ca582bfe58e40aa6e 176 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 8 149 3.1E-23 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G NIAKO_RS20960 b02221b09a878178426c4ef3bd3091e8 130 SUPERFAMILY SSF159238 1 129 3.27E-37 T 23-04-2016 IPR023159 SO1590-like domain NIAKO_RS20960 b02221b09a878178426c4ef3bd3091e8 130 Pfam PF11528 Protein of unknown function (DUF3224) 5 126 1.3E-40 T 23-04-2016 IPR021607 Protein of unknown function DUF3224 NIAKO_RS20960 b02221b09a878178426c4ef3bd3091e8 130 Gene3D G3DSA:2.40.350.10 2 129 1.0E-43 T 23-04-2016 IPR023159 SO1590-like domain NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 493 55.103 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 493 2.4E-232 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Gene3D G3DSA:3.40.50.300 78 377 1.0E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 74 1.2E-21 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 SMART SM00382 143 360 1.4E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Gene3D G3DSA:2.40.10.170 3 75 4.3E-32 T 23-04-2016 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 SUPERFAMILY SSF52540 79 202 2.82E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 SUPERFAMILY SSF52540 230 381 2.82E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 375 1.6E-57 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 SUPERFAMILY SSF47917 379 493 7.06E-49 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 SUPERFAMILY SSF50615 3 75 7.32E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 PANTHER PTHR15184:SF8 3 201 4.0E-302 T 23-04-2016 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 PANTHER PTHR15184:SF8 224 497 4.0E-302 T 23-04-2016 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 PANTHER PTHR15184 3 201 4.0E-302 T 23-04-2016 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 PANTHER PTHR15184 224 497 4.0E-302 T 23-04-2016 NIAKO_RS27130 a512dad02320020bb5d8d8e450774f63 499 Gene3D G3DSA:1.10.1140.10 380 493 1.1E-49 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF49464 43 133 1.55E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 45 1084 1.2E-259 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.40.170.20 249 269 1.3E-61 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.40.170.20 919 1084 1.3E-61 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.40.170.20 342 429 1.3E-61 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.40.170.20 465 839 1.3E-61 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532:SF57 512 587 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532:SF57 613 1082 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532:SF57 13 387 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 245 1.6E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532 512 587 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532 613 1082 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 PANTHER PTHR11532 13 387 6.9E-245 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.60.40.1120 41 112 1.1E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Gene3D G3DSA:2.170.130.10 137 248 1.0E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF56935 128 269 3.3E-92 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF56935 910 954 3.3E-92 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF56935 470 818 3.3E-92 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF56935 992 1084 3.3E-92 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 SUPERFAMILY SSF56935 333 421 3.3E-92 T 23-04-2016 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 Pfam PF00593 TonB dependent receptor 648 1082 2.7E-17 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14675 e7bf4ddbcd42ec0f3068a2c6f5fee39b 1084 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 221 251 8.5E-20 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 Gene3D G3DSA:1.10.760.10 112 184 3.1E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 Gene3D G3DSA:1.10.760.10 42 64 3.1E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 SUPERFAMILY SSF46626 112 188 2.44E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 SUPERFAMILY SSF46626 45 73 2.44E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 PANTHER PTHR35008:SF5 110 191 1.6E-17 T 23-04-2016 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 Pfam PF00034 Cytochrome c 46 184 5.9E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS06920 b5676a2a40bf5533eaa004d0e19d0012 197 PANTHER PTHR35008 110 191 1.6E-17 T 23-04-2016 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 PANTHER PTHR23105 19 230 4.9E-77 T 23-04-2016 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 Gene3D G3DSA:3.30.190.20 17 68 1.3E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 Gene3D G3DSA:3.30.190.20 161 227 1.3E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 2.5E-54 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 PIRSF PIRSF002155 1 227 9.8E-72 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 Gene3D G3DSA:3.40.50.790 69 159 3.6E-39 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.897 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 SUPERFAMILY SSF56808 6 225 5.49E-79 T 23-04-2016 IPR023674 Ribosomal protein L1-like NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 5 228 8.4E-97 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NIAKO_RS24195 ce81423c987c5c07ff74237ebd7c00cd 231 PANTHER PTHR23105:SF5 19 230 4.9E-77 T 23-04-2016 NIAKO_RS02300 1561ad3fc55233fe32e4ed974e981179 583 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 31 498 7.8E-76 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NIAKO_RS02300 1561ad3fc55233fe32e4ed974e981179 583 SUPERFAMILY SSF69255 372 452 2.56E-19 T 23-04-2016 NIAKO_RS02300 1561ad3fc55233fe32e4ed974e981179 583 Gene3D G3DSA:2.40.50.230 378 451 1.4E-15 T 23-04-2016 IPR006531 Gp5 N-terminal NIAKO_RS02300 1561ad3fc55233fe32e4ed974e981179 583 SUPERFAMILY SSF69279 30 188 2.13E-14 T 23-04-2016 NIAKO_RS11710 7ab6e64ec69d7ebf49300371f01f0014 371 PANTHER PTHR31297 54 242 5.6E-12 T 23-04-2016 NIAKO_RS11710 7ab6e64ec69d7ebf49300371f01f0014 371 SUPERFAMILY SSF51445 13 370 6.53E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11710 7ab6e64ec69d7ebf49300371f01f0014 371 Gene3D G3DSA:3.20.20.80 32 371 8.5E-84 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11710 7ab6e64ec69d7ebf49300371f01f0014 371 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 54 346 1.7E-61 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF49464 141 221 7.19E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 Gene3D G3DSA:2.40.170.20 477 968 1.8E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF56935 222 394 1.51E-62 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF56935 1030 1074 1.51E-62 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF56935 1130 1213 1.51E-62 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF56935 468 556 1.51E-62 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 SUPERFAMILY SSF56935 590 969 1.51E-62 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 Gene3D G3DSA:2.60.40.1120 142 223 6.5E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 Gene3D G3DSA:2.170.130.10 224 374 7.3E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532:SF57 142 308 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532:SF57 683 713 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532:SF57 337 596 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532:SF57 751 1211 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 142 1213 4.1E-175 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 Pfam PF07715 TonB-dependent Receptor Plug Domain 233 370 1.1E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 Pfam PF13715 CarboxypepD_reg-like domain 142 222 6.1E-11 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532 142 308 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532 683 713 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532 337 596 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 PANTHER PTHR11532 751 1211 3.4E-144 T 23-04-2016 NIAKO_RS11665 4c3ae32ce586682bb20f896c34ac7e80 1213 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 346 376 3.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Pfam PF14905 Outer membrane protein beta-barrel family 775 919 6.1E-8 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Pfam PF14905 Outer membrane protein beta-barrel family 449 748 1.7E-29 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 PANTHER PTHR30069 306 920 3.9E-17 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 PANTHER PTHR30069 3 250 3.9E-17 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 SUPERFAMILY SSF49464 22 127 1.8E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 SUPERFAMILY SSF56935 530 709 1.99E-22 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 SUPERFAMILY SSF56935 314 477 1.99E-22 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 SUPERFAMILY SSF56935 111 283 1.99E-22 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 SUPERFAMILY SSF56935 766 921 1.99E-22 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Gene3D G3DSA:2.60.40.1120 23 101 1.3E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Gene3D G3DSA:2.170.130.10 133 205 1.4E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Pfam PF13620 Carboxypeptidase regulatory-like domain 23 96 1.7E-9 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 PANTHER PTHR30069:SF12 306 920 3.9E-17 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 PANTHER PTHR30069:SF12 3 250 3.9E-17 T 23-04-2016 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Gene3D G3DSA:2.40.170.20 613 893 7.7E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Gene3D G3DSA:2.40.170.20 223 481 7.7E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03635 50336e50ce67faf02d21658766a27c4f 942 Gene3D G3DSA:2.40.170.20 551 573 7.7E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Gene3D G3DSA:3.20.20.140 14 252 2.3E-16 T 23-04-2016 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Pfam PF14579 Helix-hairpin-helix motif 787 875 1.4E-17 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Pfam PF02811 PHP domain 14 127 1.5E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 SMART SM00481 13 80 5.1E-12 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Gene3D G3DSA:2.40.50.140 943 1017 8.3E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 PANTHER PTHR32294 10 1026 0.0 T 23-04-2016 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 12 990 1.9E-174 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 12 1064 13.18 T 23-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 PANTHER PTHR32294:SF4 10 1026 0.0 T 23-04-2016 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 SUPERFAMILY SSF89550 19 213 3.73E-12 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 288 714 4.7E-151 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS15675 377c2d7c2cd91e4b2b5badfa85684390 1064 Pfam PF01336 OB-fold nucleic acid binding domain 955 1017 1.0E-6 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NIAKO_RS04915 4562559fc6357a3f33aba71c3262a38a 193 Pfam PF06210 Protein of unknown function (DUF1003) 64 161 9.1E-40 T 23-04-2016 IPR010406 Protein of unknown function DUF1003 NIAKO_RS04915 4562559fc6357a3f33aba71c3262a38a 193 PANTHER PTHR41386 48 159 7.0E-39 T 23-04-2016 NIAKO_RS04915 4562559fc6357a3f33aba71c3262a38a 193 PANTHER PTHR41386:SF1 48 159 7.0E-39 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 PANTHER PTHR22931 773 862 1.3E-245 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 PANTHER PTHR22931 1 379 1.3E-245 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 Gene3D G3DSA:3.30.470.20 183 331 3.7E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 Gene3D G3DSA:3.30.1490.20 1 182 2.1E-59 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 PANTHER PTHR22931:SF25 773 862 1.3E-245 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 PANTHER PTHR22931:SF25 1 379 1.3E-245 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 SUPERFAMILY SSF56059 1 338 1.77E-95 T 23-04-2016 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 Pfam PF00391 PEP-utilising enzyme, mobile domain 787 858 1.5E-21 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 SUPERFAMILY SSF52009 756 861 3.14E-27 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 Gene3D G3DSA:3.50.30.10 761 860 9.3E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NIAKO_RS05115 5134d0fc0b43c2e66a4ce8eaacae86d6 863 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 312 1.9E-94 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 195 201 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 PANTHER PTHR18895:SF64 5 287 2.6E-68 T 23-04-2016 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 SUPERFAMILY SSF53335 24 278 2.39E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 287 1.9E-72 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 Gene3D G3DSA:3.40.50.150 89 290 2.6E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 PANTHER PTHR18895 5 287 2.6E-68 T 23-04-2016 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 Gene3D G3DSA:1.10.8.10 7 87 6.2E-13 T 23-04-2016 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 Pfam PF05175 Methyltransferase small domain 123 213 7.4E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NIAKO_RS22410 5ea2773da7fcc4139f0e8dad22161745 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 293 9.6E-58 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 NIAKO_RS22005 410d77ed2bf7469a0d26ad1e43d4dab4 409 SUPERFAMILY SSF52833 246 408 4.7E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22005 410d77ed2bf7469a0d26ad1e43d4dab4 409 Gene3D G3DSA:3.40.30.10 242 393 1.3E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22005 410d77ed2bf7469a0d26ad1e43d4dab4 409 Pfam PF00578 AhpC/TSA family 251 377 1.4E-8 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 PANTHER PTHR24023 26 381 4.5E-45 T 23-04-2016 NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 Pfam PF02515 CoA-transferase family III 6 371 3.2E-101 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 Gene3D G3DSA:3.30.1540.10 235 303 4.7E-8 T 23-04-2016 NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 Gene3D G3DSA:3.40.50.10540 3 219 1.0E-91 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 Gene3D G3DSA:3.40.50.10540 304 378 1.0E-91 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 SUPERFAMILY SSF89796 3 378 1.83E-102 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17860 ec62e6d82b7dc29f5b958dca5946d74f 381 PANTHER PTHR24023:SF593 26 381 4.5E-45 T 23-04-2016 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 SUPERFAMILY SSF53901 219 419 8.04E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 PANTHER PTHR11712 8 420 1.6E-187 T 23-04-2016 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 Gene3D G3DSA:3.40.47.10 269 420 6.2E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 373 4.3E-37 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 252 1.0E-55 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 PIRSF PIRSF000447 5 421 6.4E-170 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 SUPERFAMILY SSF53901 8 257 3.17E-76 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 SMART SM00825 Beta-ketoacyl synthase 10 421 3.7E-17 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 Gene3D G3DSA:3.40.47.10 12 265 1.6E-75 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27780 15de8456a9f6a3e1d4b8ac02c2962111 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 417 8.5E-181 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 3.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 3.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 3.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 SUPERFAMILY SSF51735 1 241 7.44E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PANTHER PTHR24322 6 128 1.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 PANTHER PTHR24322 144 175 1.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 Pfam PF00106 short chain dehydrogenase 2 184 1.7E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS11090 1691caa236caf27aa0a6f59f8da81a5d 268 Gene3D G3DSA:3.40.50.720 2 242 1.3E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 Pfam PF13378 Enolase C-terminal domain-like 178 409 2.8E-53 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 PANTHER PTHR13794:SF4 60 194 2.8E-97 T 23-04-2016 NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 PANTHER PTHR13794:SF4 211 419 2.8E-97 T 23-04-2016 NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 Gene3D G3DSA:3.20.20.120 157 397 3.7E-79 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 SUPERFAMILY SSF51604 139 417 4.06E-74 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 SMART SM00922 174 287 1.4E-22 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 60 151 1.5E-8 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 Gene3D G3DSA:3.30.390.10 47 156 4.7E-32 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 PANTHER PTHR13794 60 194 2.8E-97 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 PANTHER PTHR13794 211 419 2.8E-97 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS13915 c450e8f7f1fb4d4a1dfe62643ee412b5 423 SUPERFAMILY SSF54826 47 156 1.06E-20 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS02355 32fc537c5958fd737a7c4addf5694ab5 454 SUPERFAMILY SSF49695 291 372 4.75E-15 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS02355 32fc537c5958fd737a7c4addf5694ab5 454 Gene3D G3DSA:2.60.20.10 291 373 6.2E-28 T 23-04-2016 NIAKO_RS02355 32fc537c5958fd737a7c4addf5694ab5 454 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 392 454 1.1E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25540 ea7233ba1347a23b1593b2462721f8d3 237 PANTHER PTHR34216 20 164 1.0E-12 T 23-04-2016 NIAKO_RS25540 ea7233ba1347a23b1593b2462721f8d3 237 Gene3D G3DSA:3.20.20.370 17 231 1.6E-30 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS25540 ea7233ba1347a23b1593b2462721f8d3 237 SUPERFAMILY SSF88713 16 231 1.2E-30 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS25540 ea7233ba1347a23b1593b2462721f8d3 237 Pfam PF01522 Polysaccharide deacetylase 18 144 9.4E-21 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 PANTHER PTHR23220 264 436 3.4E-13 T 23-04-2016 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 485 551 6.9E-8 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 410 467 2.6E-7 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 644 708 1.9E-4 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 321 387 4.8E-12 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 562 628 6.9 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SMART SM00191 251 315 7.4E-9 T 23-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 Gene3D G3DSA:2.130.10.130 530 734 4.3E-15 T 23-04-2016 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 Gene3D G3DSA:2.130.10.130 248 458 8.3E-31 T 23-04-2016 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 Pfam PF01839 FG-GAP repeat 414 447 2.2E-5 T 23-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 Pfam PF01839 FG-GAP repeat 325 371 2.1E-5 T 23-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 PRINTS PR01185 Integrin alpha subunit signature 324 345 1.8E-7 T 23-04-2016 IPR000413 Integrin alpha chain GO:0007155|GO:0008305 Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 PRINTS PR01185 Integrin alpha subunit signature 254 278 1.8E-7 T 23-04-2016 IPR000413 Integrin alpha chain GO:0007155|GO:0008305 Reactome: REACT_13552 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 PANTHER PTHR23220:SF83 264 436 3.4E-13 T 23-04-2016 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SUPERFAMILY SSF69318 649 735 9.81E-35 T 23-04-2016 NIAKO_RS28805 527c5bc536d160e82eb5f848cd7d64a1 738 SUPERFAMILY SSF69318 248 562 9.81E-35 T 23-04-2016 NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 Gene3D G3DSA:3.30.360.10 163 355 7.6E-31 T 23-04-2016 NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 Gene3D G3DSA:3.40.50.720 19 162 7.3E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 SUPERFAMILY SSF55347 153 317 4.41E-22 T 23-04-2016 NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 SUPERFAMILY SSF51735 13 171 2.89E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 PANTHER PTHR22604 5 355 3.2E-43 T 23-04-2016 NIAKO_RS06295 d4f28a9c616bea6b1615769e9b522741 355 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 25 143 4.1E-13 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS20300 6f7e9060a167e4adc51ce3b267070108 26 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 5 26 1.3E-7 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 NIAKO_RS20300 6f7e9060a167e4adc51ce3b267070108 26 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 5 26 7.0E-9 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 Gene3D G3DSA:3.40.50.720 118 294 2.3E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 SUPERFAMILY SSF51735 106 291 2.42E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 291 1.0E-51 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 SUPERFAMILY SSF52283 1 137 2.98E-19 T 23-04-2016 NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 PANTHER PTHR10996:SF118 1 312 6.9E-91 T 23-04-2016 NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 201 3.1E-11 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 Gene3D G3DSA:3.40.50.720 1 117 3.3E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17290 98b1c5e0c052333b74f2ae9790ebeff9 333 PANTHER PTHR10996 1 312 6.9E-91 T 23-04-2016 NIAKO_RS26515 b27bc8c39274ff0fb01062628d7112d9 250 Pfam PF16389 Domain of unknown function 38 240 7.8E-67 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 PANTHER PTHR30069:SF12 333 926 3.7E-23 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 PANTHER PTHR30069 6 272 3.7E-23 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Gene3D G3DSA:2.40.170.20 337 438 1.4E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Gene3D G3DSA:2.40.170.20 505 863 1.4E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Gene3D G3DSA:2.40.170.20 245 301 1.4E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Pfam PF14905 Outer membrane protein beta-barrel family 475 934 1.8E-42 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 PANTHER PTHR30069 333 926 3.7E-23 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 SUPERFAMILY SSF56935 130 305 6.87E-27 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 SUPERFAMILY SSF56935 825 935 6.87E-27 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 SUPERFAMILY SSF56935 343 503 6.87E-27 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 SUPERFAMILY SSF56935 568 787 6.87E-27 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Pfam PF13620 Carboxypeptidase regulatory-like domain 44 118 1.6E-10 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 SUPERFAMILY SSF49478 53 115 8.63E-10 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 PANTHER PTHR30069:SF12 6 272 3.7E-23 T 23-04-2016 NIAKO_RS31680 66764b8390e9d671def41ebf0e47bf0c 955 Gene3D G3DSA:2.60.40.10 40 115 3.1E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS26875 1f2e1780fc183b63f367ada5f938d3da 151 SUPERFAMILY SSF160574 22 146 3.53E-16 T 23-04-2016 NIAKO_RS26875 1f2e1780fc183b63f367ada5f938d3da 151 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 55 145 1.4E-12 T 23-04-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 PANTHER PTHR11986 6 450 8.7E-163 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 Pfam PF00202 Aminotransferase class-III 32 442 3.7E-103 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 SUPERFAMILY SSF53383 10 443 5.67E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 Gene3D G3DSA:3.40.640.10 69 322 6.8E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 Gene3D G3DSA:3.90.1150.10 323 443 8.6E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS02240 ebd0ffb9e464a939709477195ef37463 450 PANTHER PTHR11986:SF89 6 450 8.7E-163 T 23-04-2016 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 PANTHER PTHR32060:SF9 1 435 8.8E-124 T 23-04-2016 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 PANTHER PTHR32060 1 435 8.8E-124 T 23-04-2016 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Pfam PF13180 PDZ domain 102 181 3.2E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 SMART SM00245 174 355 4.3E-51 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Pfam PF03572 Peptidase family S41 201 354 2.5E-49 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 354 4.8E-81 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 SUPERFAMILY SSF50156 89 186 2.32E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 SMART SM00228 101 174 8.5E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Gene3D G3DSA:3.90.226.10 184 353 1.2E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Gene3D G3DSA:3.90.226.10 508 528 1.2E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Gene3D G3DSA:3.90.226.10 401 413 1.2E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 SUPERFAMILY SSF52096 194 354 2.65E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 SUPERFAMILY SSF52096 45 119 2.65E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Gene3D G3DSA:2.30.42.10 107 183 2.3E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS22155 4bd97bb0fae580093d861a730424ca50 528 Gene3D G3DSA:3.30.750.44 56 106 6.3E-7 T 23-04-2016 NIAKO_RS25835 cb87d4a33c85bae82f00073bfa913c9a 142 SMART SM00317 6 129 2.0E-13 T 23-04-2016 IPR001214 SET domain GO:0005515 NIAKO_RS25835 cb87d4a33c85bae82f00073bfa913c9a 142 Gene3D G3DSA:2.170.270.10 5 123 4.8E-18 T 23-04-2016 NIAKO_RS25835 cb87d4a33c85bae82f00073bfa913c9a 142 Pfam PF00856 SET domain 19 123 3.7E-6 T 23-04-2016 IPR001214 SET domain GO:0005515 NIAKO_RS25835 cb87d4a33c85bae82f00073bfa913c9a 142 SUPERFAMILY SSF82199 5 130 5.49E-19 T 23-04-2016 NIAKO_RS09970 7aba5ed035cb1ce72876cd4ce7a72b92 93 Pfam PF05258 Protein of unknown function (DUF721) 5 92 2.0E-16 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 Gene3D G3DSA:2.115.10.20 35 312 8.6E-77 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 Pfam PF04616 Glycosyl hydrolases family 43 36 306 5.0E-73 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 PANTHER PTHR22925 1 533 1.3E-178 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 PANTHER PTHR22925:SF34 1 533 1.3E-178 T 23-04-2016 NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 SUPERFAMILY SSF49899 339 534 4.75E-37 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 SUPERFAMILY SSF75005 36 310 7.98E-83 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS26065 0de3b283ff6f3e60f0e846b797c0cc9b 534 Gene3D G3DSA:2.60.120.200 338 534 1.8E-42 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS32175 4bd93447a885dfffeaafbb38a6843123 298 Pfam PF06271 RDD family 159 262 3.9E-9 T 23-04-2016 IPR010432 RDD NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 SUPERFAMILY SSF54637 529 679 2.51E-34 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 Pfam PF01575 MaoC like domain 540 644 4.2E-24 T 23-04-2016 IPR002539 MaoC-like domain NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 Pfam PF00171 Aldehyde dehydrogenase family 12 499 3.1E-54 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 PANTHER PTHR11699:SF12 7 443 7.8E-139 T 23-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 Gene3D G3DSA:3.40.605.10 2 263 1.4E-34 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 6 678 7.6E-281 T 23-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 Gene3D G3DSA:3.10.129.10 525 680 1.9E-41 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 SUPERFAMILY SSF53720 4 502 4.97E-75 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 PANTHER PTHR11699 7 443 7.8E-139 T 23-04-2016 NIAKO_RS29920 7177466ba12cb58dd8312f2830f11101 681 Gene3D G3DSA:3.40.309.10 264 455 5.0E-36 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS19700 6c26c5a6f118ab95a994fb4ad70894e5 142 Gene3D G3DSA:2.40.50.120 26 131 5.1E-8 T 23-04-2016 NIAKO_RS19700 6c26c5a6f118ab95a994fb4ad70894e5 142 SUPERFAMILY SSF50242 26 126 6.47E-12 T 23-04-2016 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold NIAKO_RS19700 6c26c5a6f118ab95a994fb4ad70894e5 142 Pfam PF00965 Tissue inhibitor of metalloproteinase 25 121 4.1E-5 T 23-04-2016 IPR001820 Protease inhibitor I35 (TIMP) GO:0008191 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 320 384 2.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 179 304 3.1E-25 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SUPERFAMILY SSF55874 377 549 2.88E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 2.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 2.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 2.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 2.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Gene3D G3DSA:3.30.565.10 375 550 3.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00387 426 551 6.9E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00388 319 387 5.1E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Gene3D G3DSA:3.30.450.20 21 136 8.5E-11 T 23-04-2016 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Gene3D G3DSA:1.10.287.130 312 374 9.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PANTHER PTHR24423 181 554 6.0E-89 T 23-04-2016 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 PANTHER PTHR24423 86 152 6.0E-89 T 23-04-2016 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00091 16 87 240.0 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00091 183 252 9.7E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SUPERFAMILY SSF55785 28 144 1.36E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SUPERFAMILY SSF47384 306 383 4.71E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 430 550 1.2E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Pfam PF13426 PAS domain 26 135 3.4E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Pfam PF13426 PAS domain 196 298 1.4E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SUPERFAMILY SSF55785 170 294 1.71E-23 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 Gene3D G3DSA:3.30.450.20 171 293 4.9E-25 T 23-04-2016 NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00086 257 299 3.4 T 23-04-2016 IPR001610 PAC motif NIAKO_RS15400 f7c7f99e7e025fac000b4523c19dbd7c 556 SMART SM00086 95 137 5.4 T 23-04-2016 IPR001610 PAC motif NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PANTHER PTHR11956 1 209 4.5E-146 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PANTHER PTHR11956 246 618 4.5E-146 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PANTHER PTHR11956:SF6 1 209 4.5E-146 T 23-04-2016 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PANTHER PTHR11956:SF6 246 618 4.5E-146 T 23-04-2016 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Gene3D G3DSA:3.30.1360.70 8 103 7.9E-14 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 222 618 2.7E-79 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SMART SM00836 505 618 5.9E-34 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Gene3D G3DSA:3.40.50.620 112 496 5.1E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SUPERFAMILY SSF55190 7 100 1.28E-12 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 88 5.1E-9 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SUPERFAMILY SSF52374 248 496 1.42E-67 T 23-04-2016 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SUPERFAMILY SSF52374 112 203 1.42E-67 T 23-04-2016 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Gene3D G3DSA:1.10.730.10 501 618 1.6E-28 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PRINTS PR01038 Arginyl-tRNA synthetase signature 339 360 8.9E-16 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 8.9E-16 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 8.9E-16 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 8.9E-16 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Pfam PF05746 DALR anticodon binding domain 505 618 8.1E-30 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 124 135 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SMART SM01016 5 89 1.5E-9 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 618 22.656 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 SUPERFAMILY SSF47323 501 618 1.05E-27 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Pfam PF00750 tRNA synthetases class I (R) 216 479 3.8E-26 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS10385 dafd588e70224470c13b2cead5c1b275 618 Pfam PF00750 tRNA synthetases class I (R) 107 165 5.1E-12 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 Pfam PF00579 tRNA synthetases class I (W and Y) 8 287 1.6E-67 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 333 5.3E-89 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 Gene3D G3DSA:1.10.240.10 209 325 1.8E-25 T 23-04-2016 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 199 209 1.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 1.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 Gene3D G3DSA:3.40.50.620 8 208 1.6E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PANTHER PTHR10055:SF10 1 333 1.5E-123 T 23-04-2016 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 6 334 35.192 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 PANTHER PTHR10055 1 333 1.5E-123 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NIAKO_RS26920 ed01790a7a629913d1ddf8c0021de9a4 336 SUPERFAMILY SSF52374 8 333 2.01E-77 T 23-04-2016 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 396 414 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 312 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 337 352 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 121 145 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 424 443 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 382 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PRINTS PR01165 Cytochrome c oxidase subunit I signature 474 495 3.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PANTHER PTHR10422 17 602 2.0E-202 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 Gene3D G3DSA:1.20.210.10 19 586 2.5E-179 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 SUPERFAMILY SSF81442 28 572 1.57E-151 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 PANTHER PTHR10422:SF6 17 602 2.0E-202 T 23-04-2016 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 293 347 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS31860 935bfb36175b6fedb108b587cc0fe4ce 602 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 41 512 1.5E-134 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33975 7edfcca0e52241b86bfbabfd05c04c97 705 Gene3D G3DSA:1.10.238.10 439 525 6.6E-4 T 23-04-2016 IPR011992 EF-hand domain pair NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:3.30.450.20 395 551 1.5E-33 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 281 1.0E-29 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 409 1.3E-11 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 38 157 5.4E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 411 535 1.1E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00086 111 153 7.4 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00086 359 403 0.46 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00086 486 528 1.8E-8 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00086 233 275 0.027 T 23-04-2016 IPR001610 PAC motif NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:3.30.450.20 284 394 2.9E-20 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Pfam PF00512 His Kinase A (phospho-acceptor) domain 565 623 9.2E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF55785 272 401 3.14E-17 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Pfam PF08448 PAS fold 42 154 2.8E-6 T 23-04-2016 IPR013656 PAS fold-4 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00388 559 625 7.4E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 PANTHER PTHR24423 134 290 2.5E-104 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 PANTHER PTHR24423 413 789 2.5E-104 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF55785 39 154 4.36E-12 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF55785 400 526 1.77E-22 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF47384 546 623 9.02E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 774 787 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 768 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 731 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00091 34 104 4.4 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00091 161 227 1.2E-10 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00091 287 354 0.017 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00091 415 481 0.037 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SMART SM00387 666 790 2.4E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Pfam PF08447 PAS fold 441 522 1.9E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:3.30.450.20 38 152 2.2E-12 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:3.30.565.10 628 790 2.8E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF55785 172 284 5.39E-26 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:3.30.450.20 161 283 8.1E-30 T 23-04-2016 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 SUPERFAMILY SSF55874 614 788 1.07E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 669 788 2.3E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Pfam PF00989 PAS fold 162 272 8.5E-15 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS36275 93633028e26da062b4b65677729a06ac 791 Gene3D G3DSA:1.10.287.130 552 621 2.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS17270 dbd3a10e29e73123d21d4d273f6c0879 312 Gene3D G3DSA:3.20.20.190 40 296 1.8E-44 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS17270 dbd3a10e29e73123d21d4d273f6c0879 312 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 57 225 5.4E-20 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NIAKO_RS17270 dbd3a10e29e73123d21d4d273f6c0879 312 PANTHER PTHR23344 49 249 6.7E-27 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 NIAKO_RS17270 dbd3a10e29e73123d21d4d273f6c0879 312 SUPERFAMILY SSF51695 51 293 8.37E-43 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS28765 843c411834e8a8734f0165ec1b2b2aeb 155 SUPERFAMILY SSF47240 3 125 3.79E-8 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS28765 843c411834e8a8734f0165ec1b2b2aeb 155 Pfam PF09537 Domain of unknown function (DUF2383) 6 117 3.2E-31 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 NIAKO_RS28765 843c411834e8a8734f0165ec1b2b2aeb 155 PIRSF PIRSF029477 1 154 1.0E-38 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 NIAKO_RS28765 843c411834e8a8734f0165ec1b2b2aeb 155 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 8 148 3.2E-32 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 NIAKO_RS28765 843c411834e8a8734f0165ec1b2b2aeb 155 Gene3D G3DSA:1.20.1260.10 2 136 2.7E-7 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 Pfam PF01987 Mitochondrial biogenesis AIM24 9 226 1.1E-67 T 23-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 PANTHER PTHR31801:SF3 2 262 2.6E-107 T 23-04-2016 NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 SUPERFAMILY SSF51219 7 241 2.25E-83 T 23-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 8 232 4.4E-35 T 23-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 PANTHER PTHR31801 2 262 2.6E-107 T 23-04-2016 NIAKO_RS28575 6960b1a983a1f2404a78132e75ddd909 264 Gene3D G3DSA:3.60.160.10 3 249 2.3E-101 T 23-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 Gene3D G3DSA:3.20.20.80 34 381 1.5E-101 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 SMART SM00812 29 422 1.8E-111 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 SUPERFAMILY SSF51445 34 381 4.42E-98 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 Pfam PF01120 Alpha-L-fucosidase 19 378 2.6E-102 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 PANTHER PTHR10030 1 240 2.2E-60 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 PANTHER PTHR10030 257 410 2.2E-60 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 PIRSF PIRSF001092 2 477 4.6E-125 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 PANTHER PTHR10030:SF25 1 240 2.2E-60 T 23-04-2016 NIAKO_RS35785 d009178f406661a7fae05ef5878cda42 478 PANTHER PTHR10030:SF25 257 410 2.2E-60 T 23-04-2016 NIAKO_RS00870 83c740bfb3b239489f48b39aa6233062 104 Pfam PF11950 Protein of unknown function (DUF3467) 2 86 7.1E-27 T 23-04-2016 IPR021857 Protein of unknown function DUF3467 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 PANTHER PTHR22769 7 204 1.4E-44 T 23-04-2016 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 Pfam PF00293 NUDIX domain 11 135 2.6E-21 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 PRINTS PR00502 NUDIX hydrolase family signature 41 55 6.7E-7 T 23-04-2016 IPR020476 NUDIX hydrolase NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 PRINTS PR00502 NUDIX hydrolase family signature 55 70 6.7E-7 T 23-04-2016 IPR020476 NUDIX hydrolase NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 SUPERFAMILY SSF46785 150 223 1.25E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 PANTHER PTHR22769:SF33 7 204 1.4E-44 T 23-04-2016 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 Gene3D G3DSA:3.90.79.10 7 139 1.2E-48 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 SUPERFAMILY SSF55811 9 146 1.62E-38 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28965 92a609f52231ff28160782190dd73bfe 230 Gene3D G3DSA:1.10.10.10 143 224 6.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 Gene3D G3DSA:1.20.1090.10 194 307 2.3E-21 T 23-04-2016 NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 PANTHER PTHR11496 1 362 1.3E-95 T 23-04-2016 NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 SUPERFAMILY SSF56796 3 340 2.62E-67 T 23-04-2016 NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 Gene3D G3DSA:3.40.50.1970 3 189 1.7E-35 T 23-04-2016 NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 307 1.2E-55 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 NIAKO_RS31255 ad1fbdb9d0431f9342046d9cd39ae577 364 PANTHER PTHR11496:SF68 1 362 1.3E-95 T 23-04-2016 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 Pfam PF01497 Periplasmic binding protein 21 196 1.9E-19 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 Gene3D G3DSA:3.40.50.1980 137 255 3.1E-15 T 23-04-2016 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 PANTHER PTHR30535:SF6 1 256 3.0E-45 T 23-04-2016 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 PANTHER PTHR30535 1 256 3.0E-45 T 23-04-2016 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 SUPERFAMILY SSF53807 3 254 1.53E-47 T 23-04-2016 NIAKO_RS22200 8e93ca23f9d3ed61329aac244a30d662 258 Gene3D G3DSA:3.40.50.1980 18 136 3.2E-25 T 23-04-2016 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 7.7E-10 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 SUPERFAMILY SSF50129 1 150 2.74E-39 T 23-04-2016 IPR011032 GroES-like NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 Gene3D G3DSA:3.40.50.720 152 238 7.9E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 PANTHER PTHR11695 15 316 1.3E-95 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 SMART SM00829 10 314 3.8E-27 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 Pfam PF13602 Zinc-binding dehydrogenase 188 314 4.9E-24 T 23-04-2016 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 SUPERFAMILY SSF51735 118 282 4.07E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02990 c2da5572d9bcfda63268e1265273e50b 319 Gene3D G3DSA:3.90.180.10 1 151 4.6E-45 T 23-04-2016 IPR011032 GroES-like NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 Gene3D G3DSA:1.10.10.60 241 288 4.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 PANTHER PTHR11019:SF137 32 286 1.6E-39 T 23-04-2016 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 SUPERFAMILY SSF51215 37 169 1.57E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 PANTHER PTHR11019 32 286 1.6E-39 T 23-04-2016 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 Pfam PF12833 Helix-turn-helix domain 209 286 1.3E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 SMART SM00342 203 286 6.7E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04145 1168d01aaa0b054264f126c540e38103 291 SUPERFAMILY SSF46689 242 289 3.49E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS09960 075a02a35662c0ed0246beaa926f55d3 299 SUPERFAMILY SSF63829 44 298 9.37E-56 T 23-04-2016 NIAKO_RS09960 075a02a35662c0ed0246beaa926f55d3 299 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 48 282 7.9E-45 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region NIAKO_RS09960 075a02a35662c0ed0246beaa926f55d3 299 Gene3D G3DSA:2.120.10.30 46 298 5.6E-55 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS09960 075a02a35662c0ed0246beaa926f55d3 299 PANTHER PTHR10907 48 282 2.7E-43 T 23-04-2016 NIAKO_RS09960 075a02a35662c0ed0246beaa926f55d3 299 PANTHER PTHR10907:SF47 48 282 2.7E-43 T 23-04-2016 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SMART SM00028 194 227 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SMART SM00028 88 121 88.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SMART SM00028 160 193 0.0056 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SMART SM00028 20 53 27.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SMART SM00028 54 87 260.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 SUPERFAMILY SSF48452 31 244 7.59E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 Pfam PF13181 Tetratricopeptide repeat 196 226 0.011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 Pfam PF13181 Tetratricopeptide repeat 160 192 0.0038 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 PANTHER PTHR23083 156 290 7.0E-27 T 23-04-2016 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 PANTHER PTHR23083 24 117 7.0E-27 T 23-04-2016 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 PANTHER PTHR23083 328 440 7.0E-27 T 23-04-2016 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 PANTHER PTHR23083 484 532 7.0E-27 T 23-04-2016 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 Gene3D G3DSA:1.25.40.10 31 237 9.0E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34755 78bd6c6b29fd1bb4f719d15931c965d9 564 Pfam PF13432 Tetratricopeptide repeat 26 85 0.0012 T 23-04-2016 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Pfam PF00675 Insulinase (Peptidase family M16) 51 166 2.6E-18 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Pfam PF00675 Insulinase (Peptidase family M16) 525 644 5.6E-15 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Gene3D G3DSA:3.30.830.10 738 921 1.2E-24 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 SUPERFAMILY SSF63411 38 254 1.37E-55 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Gene3D G3DSA:3.30.830.10 284 450 5.3E-22 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 PANTHER PTHR11851:SF136 4 859 8.4E-205 T 23-04-2016 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 SUPERFAMILY SSF63411 734 924 2.17E-31 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 SUPERFAMILY SSF63411 270 458 2.0E-33 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 PANTHER PTHR11851 4 859 8.4E-205 T 23-04-2016 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Gene3D G3DSA:3.30.830.10 509 720 3.8E-42 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Gene3D G3DSA:3.30.830.10 39 255 4.2E-54 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Pfam PF05193 Peptidase M16 inactive domain 208 380 3.1E-24 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 Pfam PF05193 Peptidase M16 inactive domain 675 854 1.2E-18 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS28580 328c10d56f8d269b99daf04afd8d2a15 955 SUPERFAMILY SSF63411 504 711 5.33E-38 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS26800 8ef3d8582ce452495842ef7cc8a11616 111 Pfam PF01638 HxlR-like helix-turn-helix 19 104 1.1E-25 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS26800 8ef3d8582ce452495842ef7cc8a11616 111 Gene3D G3DSA:1.10.10.10 3 110 2.5E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26800 8ef3d8582ce452495842ef7cc8a11616 111 SUPERFAMILY SSF46785 13 104 2.37E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26800 8ef3d8582ce452495842ef7cc8a11616 111 PANTHER PTHR33204 1 104 5.3E-28 T 23-04-2016 NIAKO_RS00700 e88341a08ae1405c3d439ea2daf3ba32 247 Gene3D G3DSA:1.10.10.60 208 234 7.3E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00700 e88341a08ae1405c3d439ea2daf3ba32 247 SMART SM00342 153 231 3.0E-4 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00700 e88341a08ae1405c3d439ea2daf3ba32 247 Gene3D G3DSA:1.10.10.60 138 191 6.9E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00700 e88341a08ae1405c3d439ea2daf3ba32 247 Pfam PF12833 Helix-turn-helix domain 159 232 1.1E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 Pfam PF06144 DNA polymerase III, delta subunit 19 183 8.3E-24 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 PANTHER PTHR34388 1 302 1.0E-46 T 23-04-2016 NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 303 1.7E-48 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 Gene3D G3DSA:3.40.50.300 5 127 1.2E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 Gene3D G3DSA:1.10.8.60 139 227 4.8E-16 T 23-04-2016 NIAKO_RS04400 520737db3e933c35d28c6f6e389a48a9 332 SUPERFAMILY SSF52540 12 203 6.37E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05875 763649e2eebfcd308e40e9776a2c5439 287 PANTHER PTHR13600 8 177 6.6E-30 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS05875 763649e2eebfcd308e40e9776a2c5439 287 SUPERFAMILY SSF53335 10 255 1.25E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05875 763649e2eebfcd308e40e9776a2c5439 287 Pfam PF04072 Leucine carboxyl methyltransferase 14 178 5.3E-32 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS05875 763649e2eebfcd308e40e9776a2c5439 287 Gene3D G3DSA:3.40.50.150 15 180 6.4E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05875 763649e2eebfcd308e40e9776a2c5439 287 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 12 252 5.1E-36 T 23-04-2016 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS27740 d10a50fbcc63b476057a281d3650ed49 569 Pfam PF09822 ABC-type uncharacterized transport system 31 316 3.8E-65 T 23-04-2016 IPR019196 ABC-type uncharacterised transport system NIAKO_RS27740 d10a50fbcc63b476057a281d3650ed49 569 TIGRFAM TIGR03521 GldG: gliding-associated putative ABC transporter substrate-binding component GldG 11 565 3.3E-172 T 23-04-2016 IPR019863 Gliding-associated putative ABC transporter substrate-binding GldG NIAKO_RS32055 c714233918a0c54228e96153e22136c6 295 Gene3D G3DSA:2.60.120.650 5 237 7.4E-38 T 23-04-2016 NIAKO_RS32055 c714233918a0c54228e96153e22136c6 295 PANTHER PTHR12461 5 237 2.4E-38 T 23-04-2016 NIAKO_RS32055 c714233918a0c54228e96153e22136c6 295 SUPERFAMILY SSF51197 5 261 4.67E-48 T 23-04-2016 NIAKO_RS32055 c714233918a0c54228e96153e22136c6 295 Pfam PF13621 Cupin-like domain 15 233 2.7E-29 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 SUPERFAMILY SSF56935 960 1006 8.24E-45 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 SUPERFAMILY SSF56935 406 493 8.24E-45 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 SUPERFAMILY SSF56935 529 897 8.24E-45 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 SUPERFAMILY SSF56935 188 327 8.24E-45 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 SUPERFAMILY SSF56935 1047 1097 8.24E-45 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 PANTHER PTHR11532 689 1127 2.7E-72 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 PANTHER PTHR11532 104 569 2.7E-72 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 PANTHER PTHR11532:SF57 689 1127 2.7E-72 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 PANTHER PTHR11532:SF57 104 569 2.7E-72 T 23-04-2016 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 105 1129 6.7E-111 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 278 308 5.3E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 Gene3D G3DSA:2.170.130.10 196 312 3.2E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15110 22a1f379451408006ed543cb22a6a6aa 1129 Pfam PF07715 TonB-dependent Receptor Plug Domain 195 302 1.1E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 Pfam PF04773 FecR protein 121 211 1.9E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 PANTHER PTHR30273 2 321 2.2E-51 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 118 - T 23-04-2016 IPR010916 TonB box, conserved site NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 PIRSF PIRSF018266 2 323 4.0E-43 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 Pfam PF16344 Domain of unknown function (DUF4974) 223 320 1.6E-14 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS08805 7120937eafbd68e2828f18277f023c94 323 PANTHER PTHR30273:SF2 2 321 2.2E-51 T 23-04-2016 NIAKO_RS20035 47bda489e9117e43922110cdbe8c46e1 278 Pfam PF13847 Methyltransferase domain 74 213 1.3E-37 T 23-04-2016 IPR025714 Methyltransferase domain NIAKO_RS20035 47bda489e9117e43922110cdbe8c46e1 278 PANTHER PTHR10108 73 270 1.7E-40 T 23-04-2016 NIAKO_RS20035 47bda489e9117e43922110cdbe8c46e1 278 PANTHER PTHR10108:SF911 73 270 1.7E-40 T 23-04-2016 NIAKO_RS20035 47bda489e9117e43922110cdbe8c46e1 278 SUPERFAMILY SSF53335 39 229 6.94E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS20035 47bda489e9117e43922110cdbe8c46e1 278 Gene3D G3DSA:3.40.50.150 71 235 5.9E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 Hamap MF_00323 Ferrochelatase [hemH]. 4 340 32.982 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 Gene3D G3DSA:3.40.50.1400 197 339 5.4E-32 T 23-04-2016 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 Gene3D G3DSA:3.40.50.1400 4 196 4.8E-51 T 23-04-2016 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 TIGRFAM TIGR00109 hemH: ferrochelatase 3 213 3.2E-47 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 SUPERFAMILY SSF53800 4 339 7.01E-85 T 23-04-2016 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 PANTHER PTHR11108 228 339 9.8E-96 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 PANTHER PTHR11108 5 205 9.8E-96 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NIAKO_RS28160 ad76cf342427103746cf6ff6c76b0a6b 340 Pfam PF00762 Ferrochelatase 5 339 1.7E-95 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 ProSitePatterns PS00211 ABC transporters family signature. 877 891 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 ProSitePatterns PS00211 ABC transporters family signature. 537 551 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Pfam PF00005 ABC transporter 671 907 1.8E-6 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.40.50.300 659 716 6.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.40.50.300 26 74 7.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.40.50.300 528 639 7.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.40.50.300 868 988 6.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 PANTHER PTHR32282:SF2 23 263 0.0 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 PANTHER PTHR32282:SF2 288 990 0.0 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 PANTHER PTHR32282 23 263 0.0 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 PANTHER PTHR32282 288 990 0.0 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:1.10.8.280 331 454 1.1E-28 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.30.1490.20 156 176 3.9E-13 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:3.30.1490.20 223 262 3.9E-13 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:1.20.1580.10 114 152 7.0E-51 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:1.20.1580.10 296 329 7.0E-51 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:1.20.1580.10 455 527 7.0E-51 T 23-04-2016 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 SUPERFAMILY SSF52540 662 957 9.84E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 SUPERFAMILY SSF52540 31 227 3.14E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 SUPERFAMILY SSF52540 474 619 3.14E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 27 971 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NIAKO_RS00595 40f2fa4a8cca9cce6986201cd95e4f1a 990 Gene3D G3DSA:1.20.1580.10 741 867 1.3E-51 T 23-04-2016 NIAKO_RS26400 83df71f59819cbf746a415b398464aa1 394 Pfam PF05426 Alginate lyase 58 334 9.0E-89 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS26400 83df71f59819cbf746a415b398464aa1 394 PANTHER PTHR41379 34 335 6.4E-63 T 23-04-2016 NIAKO_RS26400 83df71f59819cbf746a415b398464aa1 394 SUPERFAMILY SSF48230 67 392 4.12E-58 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS26400 83df71f59819cbf746a415b398464aa1 394 PANTHER PTHR41379:SF1 34 335 6.4E-63 T 23-04-2016 NIAKO_RS26400 83df71f59819cbf746a415b398464aa1 394 Gene3D G3DSA:1.50.10.110 41 345 8.1E-61 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 SMART SM00345 22 81 6.6E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 PANTHER PTHR11751:SF294 128 489 1.7E-70 T 23-04-2016 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 Gene3D G3DSA:3.40.640.10 157 380 4.0E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 Pfam PF00155 Aminotransferase class I and II 143 482 3.0E-30 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 SUPERFAMILY SSF46785 15 84 4.59E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 1.9E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 SUPERFAMILY SSF53383 76 489 8.76E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 PANTHER PTHR11751 128 489 1.7E-70 T 23-04-2016 NIAKO_RS02370 d170f196a1dd986259499f9eed9117d5 490 Gene3D G3DSA:1.10.10.10 8 82 1.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09735 da325bf88af917b92592dae497178e6f 130 SMART SM00448 7 118 0.0084 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09735 da325bf88af917b92592dae497178e6f 130 Gene3D G3DSA:3.40.50.2300 6 128 2.0E-13 T 23-04-2016 NIAKO_RS09735 da325bf88af917b92592dae497178e6f 130 Pfam PF00072 Response regulator receiver domain 9 103 3.2E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09735 da325bf88af917b92592dae497178e6f 130 PANTHER PTHR26402 7 125 1.7E-12 T 23-04-2016 NIAKO_RS09735 da325bf88af917b92592dae497178e6f 130 SUPERFAMILY SSF52172 7 126 1.99E-14 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 Gene3D G3DSA:1.10.10.10 133 195 1.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 SUPERFAMILY SSF88659 133 193 5.23E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 Pfam PF08281 Sigma-70, region 4 149 191 1.3E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 SUPERFAMILY SSF88946 8 107 1.46E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 PANTHER PTHR30173:SF24 1 195 2.2E-38 T 23-04-2016 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 194 1.9E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 Pfam PF04542 Sigma-70 region 2 30 95 3.9E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 PANTHER PTHR30173 1 195 2.2E-38 T 23-04-2016 NIAKO_RS11550 657cab49f4d2fcf206d021a5679b4f93 204 Gene3D G3DSA:1.10.1740.10 8 107 5.2E-27 T 23-04-2016 NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 Gene3D G3DSA:3.40.640.10 4 250 1.0E-101 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 PIRSF PIRSF000390 1 373 3.1E-104 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 SUPERFAMILY SSF53383 4 372 6.05E-103 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 PANTHER PTHR30244 1 372 2.8E-143 T 23-04-2016 NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 PANTHER PTHR30244:SF18 1 372 2.8E-143 T 23-04-2016 NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 Gene3D G3DSA:3.90.1150.10 252 372 3.0E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS26220 aefe8055acf132a402b181dada5e98d9 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 371 3.4E-98 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 Pfam PF13088 BNR repeat-like domain 322 614 1.1E-18 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 Gene3D G3DSA:2.120.10.10 283 664 2.5E-42 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 SUPERFAMILY SSF50939 306 662 4.49E-32 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 PANTHER PTHR23150 26 289 9.9E-51 T 23-04-2016 NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 SUPERFAMILY SSF56436 28 253 1.08E-61 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 Pfam PF03781 Sulfatase-modifying factor enzyme 1 32 252 1.1E-50 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS35810 d993a2608e54d70c505aa898d487cd8e 665 Gene3D G3DSA:3.90.1580.10 23 255 1.1E-64 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 314 108.567 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 Pfam PF02504 Fatty acid synthesis protein 1 303 2.0E-91 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 PANTHER PTHR30100:SF1 1 312 9.8E-96 T 23-04-2016 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 246 1.4E-83 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 Gene3D G3DSA:3.40.718.10 1 312 1.6E-106 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 SUPERFAMILY SSF53659 1 312 5.35E-81 T 23-04-2016 NIAKO_RS21300 466f276f5a8f326d0cd1b6a590397aad 314 PANTHER PTHR30100 1 312 9.8E-96 T 23-04-2016 NIAKO_RS16415 c175e8926ba568c7a60364d3b11f48fc 263 PANTHER PTHR36839 3 263 3.5E-75 T 23-04-2016 NIAKO_RS16415 c175e8926ba568c7a60364d3b11f48fc 263 SMART SM00849 73 241 0.0089 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS16415 c175e8926ba568c7a60364d3b11f48fc 263 PANTHER PTHR36839:SF1 3 263 3.5E-75 T 23-04-2016 NIAKO_RS16415 c175e8926ba568c7a60364d3b11f48fc 263 Gene3D G3DSA:3.60.15.10 57 229 2.4E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS16415 c175e8926ba568c7a60364d3b11f48fc 263 SUPERFAMILY SSF56281 55 229 8.82E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993 3 116 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993 359 564 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993 186 254 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993:SF22 3 116 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993:SF22 359 564 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 PANTHER PTHR11993:SF22 186 254 4.6E-188 T 23-04-2016 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 Pfam PF00374 Nickel-dependent hydrogenase 39 557 3.2E-224 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 548 557 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 Gene3D G3DSA:1.10.645.10 1 557 1.3E-221 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS06205 242720495a82aa2abc68b46a6357659b 574 SUPERFAMILY SSF56762 1 557 1.27E-170 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 ProSitePatterns PS00755 Protein secY signature 1. 72 91 - T 23-04-2016 IPR030659 SecY conserved site NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 426 27.909 T 23-04-2016 IPR026593 Protein translocase subunit SecY NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 112 135 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 71 91 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 360 378 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 305 327 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 395 413 4.7E-86 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PANTHER PTHR10906 5 440 5.8E-180 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 422 5.5E-112 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 23-04-2016 IPR030659 SecY conserved site NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PIRSF PIRSF004557 1 432 2.6E-116 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 SUPERFAMILY SSF103491 3 417 4.05E-110 T 23-04-2016 IPR023201 SecY subunit domain NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 Pfam PF00344 SecY translocase 72 409 1.7E-106 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 PANTHER PTHR10906:SF2 5 440 5.8E-180 T 23-04-2016 NIAKO_RS22900 b353e1bd6cbb5fcd75aed2088e1f1e13 443 Gene3D G3DSA:1.10.3370.10 5 430 9.7E-141 T 23-04-2016 IPR023201 SecY subunit domain NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 216 6.1E-78 T 23-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 Gene3D G3DSA:3.20.20.70 1 218 4.0E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 Pfam PF00923 Transaldolase 3 220 4.5E-52 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 SUPERFAMILY SSF51569 1 218 1.47E-68 T 23-04-2016 NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS07690 a4412be5ae1c6b2732ab6f5bf1ecfba5 225 PANTHER PTHR10683 1 222 3.4E-71 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PANTHER PTHR24322 151 182 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PANTHER PTHR24322 5 135 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 Gene3D G3DSA:3.40.50.720 3 212 9.6E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 SUPERFAMILY SSF51735 3 213 6.92E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32585 38076170bef296c89f03ec8ee4bf15dd 233 Pfam PF00106 short chain dehydrogenase 2 189 4.6E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 Pfam PF13585 C-terminal domain of CHU protein family 781 853 4.0E-18 T 23-04-2016 NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 SUPERFAMILY SSF49299 258 380 3.4E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 SUPERFAMILY SSF49299 386 463 3.27E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 Pfam PF00801 PKD domain 398 452 2.4E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 782 866 6.1E-14 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 SMART SM00089 307 381 4.3 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 SMART SM00089 383 466 3.9E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 Gene3D G3DSA:2.60.40.670 391 468 4.6E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS30655 a5ce7a8e26ea736f71cb4da8be66479e 868 Gene3D G3DSA:2.60.40.670 294 379 3.4E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 Gene3D G3DSA:3.90.1310.10 158 252 7.4E-15 T 23-04-2016 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 Pfam PF03793 PASTA domain 654 706 5.7E-10 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 Gene3D G3DSA:3.40.710.10 253 586 4.0E-75 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 SUPERFAMILY SSF56519 50 244 2.75E-18 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 SUPERFAMILY SSF56601 246 585 3.0E-74 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 580 5.4E-54 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 PANTHER PTHR30627 1 616 6.7E-117 T 23-04-2016 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 Pfam PF03717 Penicillin-binding Protein dimerisation domain 54 225 1.3E-9 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 PANTHER PTHR30627:SF1 1 616 6.7E-117 T 23-04-2016 NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 SMART SM00740 649 707 2.5E-7 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS36000 f4f5cd7ebf76011dba11cea6fa6969a0 707 SUPERFAMILY SSF54184 654 706 1.57E-10 T 23-04-2016 NIAKO_RS15745 ffc09193937a00c51b9ba6565f95b31d 502 Gene3D G3DSA:1.25.40.10 218 419 1.3E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15745 ffc09193937a00c51b9ba6565f95b31d 502 Pfam PF07980 SusD family 350 500 1.1E-17 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15745 ffc09193937a00c51b9ba6565f95b31d 502 Pfam PF14322 Starch-binding associating with outer membrane 53 237 2.9E-23 T 23-04-2016 NIAKO_RS15745 ffc09193937a00c51b9ba6565f95b31d 502 SUPERFAMILY SSF48452 18 446 1.52E-77 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15745 ffc09193937a00c51b9ba6565f95b31d 502 SUPERFAMILY SSF48452 474 500 1.52E-77 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26790 4d1d19f548d22c4011bbb4012d646fc0 339 Pfam PF06580 Histidine kinase 153 231 1.3E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS26790 4d1d19f548d22c4011bbb4012d646fc0 339 PANTHER PTHR34220 34 338 3.7E-53 T 23-04-2016 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 PANTHER PTHR11122:SF14 193 289 1.1E-44 T 23-04-2016 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 PANTHER PTHR11122:SF14 1 163 1.1E-44 T 23-04-2016 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 Gene3D G3DSA:2.70.98.10 1 286 1.0E-23 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 PANTHER PTHR11122 193 289 1.1E-44 T 23-04-2016 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 PANTHER PTHR11122 1 163 1.1E-44 T 23-04-2016 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 Pfam PF01263 Aldose 1-epimerase 2 257 3.4E-28 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 NIAKO_RS14885 c6bee2dd50dceb3b2704bcb27ca4bd61 289 SUPERFAMILY SSF74650 2 288 5.84E-53 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS23305 345bafed28502baa840a3c6815f54447 297 SUPERFAMILY SSF63829 74 281 3.01E-7 T 23-04-2016 NIAKO_RS23305 345bafed28502baa840a3c6815f54447 297 Gene3D G3DSA:2.130.10.10 111 228 1.9E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 SUPERFAMILY SSF53383 1 394 1.63E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 PANTHER PTHR11751 13 396 5.2E-145 T 23-04-2016 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 Pfam PF00155 Aminotransferase class I and II 31 388 5.2E-65 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 Gene3D G3DSA:3.40.640.10 44 271 7.8E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 PANTHER PTHR11751:SF306 13 396 5.2E-145 T 23-04-2016 NIAKO_RS04935 4806df1f6e5943d7ac3a012d9b548efd 396 Gene3D G3DSA:3.90.1150.10 272 395 3.9E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 320 350 7.1E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 Gene3D G3DSA:2.60.40.1120 142 225 2.3E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 141 1149 2.4E-285 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF49464 140 219 2.75E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 Gene3D G3DSA:2.170.130.10 226 347 1.2E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 ProSitePatterns PS00018 EF-hand calcium-binding domain. 955 967 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 Pfam PF07715 TonB-dependent Receptor Plug Domain 230 344 4.3E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF56935 966 1010 4.03E-72 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF56935 553 897 4.03E-72 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF56935 1066 1149 4.03E-72 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF56935 218 368 4.03E-72 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 SUPERFAMILY SSF56935 425 522 4.03E-72 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 PANTHER PTHR11532 644 1147 1.9E-295 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 PANTHER PTHR11532 141 516 1.9E-295 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 Pfam PF13715 CarboxypepD_reg-like domain 142 222 6.3E-10 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 PANTHER PTHR11532:SF57 644 1147 1.9E-295 T 23-04-2016 NIAKO_RS17215 e5b1ba90bceb98f9049c380cff9286ca 1149 PANTHER PTHR11532:SF57 141 516 1.9E-295 T 23-04-2016 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.50.50.60 189 267 2.8E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.50.50.60 109 131 2.8E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.50.50.60 4 59 2.8E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.50.50.60 358 415 2.8E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Pfam PF01266 FAD dependent oxidoreductase 5 396 3.6E-59 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 SUPERFAMILY SSF54373 269 358 4.19E-10 T 23-04-2016 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 PANTHER PTHR13847 108 415 3.9E-63 T 23-04-2016 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 PANTHER PTHR13847 1 61 3.9E-63 T 23-04-2016 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 SUPERFAMILY SSF51905 4 55 8.42E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 SUPERFAMILY SSF51905 358 415 8.42E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 SUPERFAMILY SSF51905 116 268 8.42E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.30.9.10 155 188 1.1E-4 T 23-04-2016 NIAKO_RS12685 91c8e9ab8cb3d60bb237fc4dba2a9f28 415 Gene3D G3DSA:3.30.9.10 268 309 1.1E-4 T 23-04-2016 NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 PANTHER PTHR22925:SF42 39 436 3.4E-93 T 23-04-2016 NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 PANTHER PTHR22925 39 436 3.4E-93 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 Gene3D G3DSA:2.60.120.260 993 1108 7.4E-14 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 Gene3D G3DSA:2.60.120.260 226 309 6.4E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 SUPERFAMILY SSF49785 220 306 2.49E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 SUPERFAMILY SSF49785 993 1147 2.31E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 Pfam PF17132 alpha-L-rhamnosidase 45 703 1.2E-151 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS17645 3f299c933693d0458e4c9181891eb2ae 1151 Pfam PF17132 alpha-L-rhamnosidase 750 944 4.8E-36 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 12 197 9.0E-61 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 PANTHER PTHR10429:SF0 1 197 1.4E-70 T 23-04-2016 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 SUPERFAMILY SSF50486 4 201 4.24E-64 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 Gene3D G3DSA:3.10.300.10 6 203 3.5E-72 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 8 194 5.3E-57 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 PANTHER PTHR10429 1 197 1.4E-70 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NIAKO_RS34490 da99dfaec0347dcf1a0b0d934f2ad696 207 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 197 32.349 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 Gene3D G3DSA:3.30.565.10 225 386 4.6E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 Gene3D G3DSA:1.10.287.130 160 224 8.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 SUPERFAMILY SSF47384 156 236 1.41E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 386 2.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 SMART SM00388 167 235 1.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 SMART SM00387 278 388 7.8E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 235 8.8E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 SUPERFAMILY SSF55874 225 386 8.25E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36970 9933b8b4f195a341bcfe426a93ddcc8d 388 PANTHER PTHR24423 156 386 4.0E-51 T 23-04-2016 NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 Pfam PF04773 FecR protein 197 285 4.0E-15 T 23-04-2016 IPR006860 FecR protein NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273:SF2 1 128 6.0E-50 T 23-04-2016 NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273:SF2 309 434 6.0E-50 T 23-04-2016 NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273:SF2 190 291 6.0E-50 T 23-04-2016 NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 Pfam PF16344 Domain of unknown function (DUF4974) 355 431 2.6E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273 1 128 6.0E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273 309 434 6.0E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS06825 1e6f17f627397363954744204537cf79 435 PANTHER PTHR30273 190 291 6.0E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 PANTHER PTHR30273 1 120 6.7E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 PANTHER PTHR30273 198 422 6.7E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 Pfam PF16344 Domain of unknown function (DUF4974) 317 418 5.3E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 PANTHER PTHR30273:SF2 1 120 6.7E-58 T 23-04-2016 NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 PANTHER PTHR30273:SF2 198 422 6.7E-58 T 23-04-2016 NIAKO_RS17460 84d1bdc3f6ff5a3bba90be7ec3c7c343 422 Pfam PF04773 FecR protein 196 299 1.3E-13 T 23-04-2016 IPR006860 FecR protein NIAKO_RS07875 c249533073868f35b6821e7dab184653 164 Gene3D G3DSA:3.40.140.10 17 160 1.1E-36 T 23-04-2016 NIAKO_RS07875 c249533073868f35b6821e7dab184653 164 PANTHER PTHR11644 13 161 3.8E-31 T 23-04-2016 NIAKO_RS07875 c249533073868f35b6821e7dab184653 164 SUPERFAMILY SSF53927 21 160 6.4E-30 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS07875 c249533073868f35b6821e7dab184653 164 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 22 123 1.2E-11 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NIAKO_RS05890 f9493d8d3e86093891835ed5a78db0da 374 SUPERFAMILY SSF63712 80 221 9.42E-6 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS05890 f9493d8d3e86093891835ed5a78db0da 374 Gene3D G3DSA:2.70.170.10 80 124 1.5E-4 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS05890 f9493d8d3e86093891835ed5a78db0da 374 Gene3D G3DSA:2.70.170.10 147 247 8.3E-5 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS05890 f9493d8d3e86093891835ed5a78db0da 374 Gene3D G3DSA:1.20.58.390 252 369 6.6E-10 T 23-04-2016 NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 6.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PANTHER PTHR24322 9 142 9.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 PANTHER PTHR24322 158 190 9.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 Gene3D G3DSA:3.40.50.720 4 252 3.7E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 8.3E-53 T 23-04-2016 NIAKO_RS14510 2e53d5bea940a08bd09fed162f275f28 253 SUPERFAMILY SSF51735 5 252 1.12E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02350 ede5f9b9ed4fd927873667e03c9bfc80 464 SUPERFAMILY SSF49695 292 373 3.64E-18 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS02350 ede5f9b9ed4fd927873667e03c9bfc80 464 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 394 463 3.4E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS02350 ede5f9b9ed4fd927873667e03c9bfc80 464 SMART SM00247 290 374 0.0044 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS02350 ede5f9b9ed4fd927873667e03c9bfc80 464 Gene3D G3DSA:2.60.20.10 290 375 5.7E-29 T 23-04-2016 NIAKO_RS04665 d41de6ef328db9ebef67767d95681837 436 Pfam PF07980 SusD family 313 429 5.6E-7 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS04665 d41de6ef328db9ebef67767d95681837 436 SUPERFAMILY SSF48452 23 433 3.67E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04665 d41de6ef328db9ebef67767d95681837 436 Pfam PF14322 Starch-binding associating with outer membrane 41 226 2.7E-15 T 23-04-2016 NIAKO_RS04665 d41de6ef328db9ebef67767d95681837 436 Gene3D G3DSA:1.25.40.10 302 393 3.0E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 PANTHER PTHR30572:SF4 265 360 9.6E-74 T 23-04-2016 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 PANTHER PTHR30572:SF4 406 803 9.6E-74 T 23-04-2016 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 Pfam PF02687 FtsX-like permease family 295 409 7.4E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 Pfam PF02687 FtsX-like permease family 683 791 2.5E-7 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 Pfam PF12704 MacB-like periplasmic core domain 20 238 1.9E-15 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 Pfam PF12704 MacB-like periplasmic core domain 430 646 5.8E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 PANTHER PTHR30572 265 360 9.6E-74 T 23-04-2016 NIAKO_RS19850 3fbec04916e3cc74e13dca5845d08023 803 PANTHER PTHR30572 406 803 9.6E-74 T 23-04-2016 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 SMART SM00342 224 307 1.3E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 SUPERFAMILY SSF46689 261 311 4.48E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 Gene3D G3DSA:1.10.10.60 218 262 2.7E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 PANTHER PTHR11019 62 183 6.5E-27 T 23-04-2016 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 PANTHER PTHR11019 200 315 6.5E-27 T 23-04-2016 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 Gene3D G3DSA:1.10.10.60 263 310 1.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 SUPERFAMILY SSF51215 67 139 4.97E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 7.8E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 7.8E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 Pfam PF12833 Helix-turn-helix domain 230 307 7.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 Gene3D G3DSA:2.60.120.280 66 189 5.9E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS23590 c7eac765b88b39b527a86d546b4affef 317 Pfam PF06719 AraC-type transcriptional regulator N-terminus 54 196 3.7E-6 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 PANTHER PTHR22572:SF105 2 266 5.0E-157 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 9.5E-147 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 PANTHER PTHR22572 2 266 5.0E-157 T 23-04-2016 NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 Pfam PF00483 Nucleotidyl transferase 2 236 2.5E-65 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 Gene3D G3DSA:3.90.550.10 1 268 2.6E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS33905 62ed5ef125f2f1b94e933dff72db258d 288 SUPERFAMILY SSF53448 1 286 2.48E-87 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 PANTHER PTHR20857 4 207 5.7E-49 T 23-04-2016 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 201 1.2E-49 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 PANTHER PTHR20857:SF15 4 207 5.7E-49 T 23-04-2016 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 207 22.82 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 5 188 1.9E-50 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 Gene3D G3DSA:3.20.20.70 4 204 1.1E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17590 e25d8d29e9e6c1c8f8726f72034766dc 207 SUPERFAMILY SSF51391 4 203 2.49E-51 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Gene3D G3DSA:1.25.40.10 30 151 2.3E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SUPERFAMILY SSF48452 30 131 2.04E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 PRINTS PR01021 OMPA domain signature 533 555 3.7E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 PRINTS PR01021 OMPA domain signature 578 594 3.7E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 PRINTS PR01021 OMPA domain signature 563 578 3.7E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Gene3D G3DSA:3.30.1330.60 525 634 1.3E-41 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SUPERFAMILY SSF82171 197 429 6.41E-14 T 23-04-2016 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Gene3D G3DSA:2.60.40.1120 435 524 3.1E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF00691 OmpA family 532 627 2.1E-25 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Gene3D G3DSA:2.120.10.30 226 424 8.3E-13 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SUPERFAMILY SSF49464 435 525 4.71E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SMART SM00028 66 99 0.029 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SMART SM00028 32 65 14.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF13181 Tetratricopeptide repeat 67 97 1.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 PANTHER PTHR30128 518 634 4.5E-43 T 23-04-2016 NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 SUPERFAMILY SSF103088 519 632 7.85E-37 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF07676 WD40-like Beta Propeller Repeat 385 420 2.0E-5 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF07676 WD40-like Beta Propeller Repeat 222 246 0.095 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF07676 WD40-like Beta Propeller Repeat 278 313 4.1E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS00820 ef58383cbe77ac4c9105b77916c88271 636 Pfam PF07676 WD40-like Beta Propeller Repeat 329 367 1.1E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 SUPERFAMILY SSF88946 3 108 1.49E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 Gene3D G3DSA:1.10.1740.10 8 110 6.6E-20 T 23-04-2016 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 SUPERFAMILY SSF88659 117 178 1.92E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 Pfam PF04542 Sigma-70 region 2 28 93 1.9E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 Pfam PF08281 Sigma-70, region 4 124 166 5.9E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 Gene3D G3DSA:1.10.10.10 118 178 2.9E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 175 6.2E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 PANTHER PTHR30173:SF20 1 194 2.1E-36 T 23-04-2016 NIAKO_RS29270 7e3875757f919e7f69bee38718193ca1 194 PANTHER PTHR30173 1 194 2.1E-36 T 23-04-2016 NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Gene3D G3DSA:3.40.50.300 598 648 2.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Gene3D G3DSA:3.40.50.300 785 851 2.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 SUPERFAMILY SSF52540 404 537 2.25E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Pfam PF13538 UvrD-like helicase C-terminal domain 792 839 1.0E-6 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 SUPERFAMILY SSF55464 1 295 1.28E-47 T 23-04-2016 NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Pfam PF08751 TrwC relaxase 11 289 4.5E-63 T 23-04-2016 IPR014862 TrwC relaxase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Gene3D G3DSA:3.40.50.300 404 568 3.1E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 Pfam PF13604 AAA domain 409 596 1.5E-46 T 23-04-2016 NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 SUPERFAMILY SSF52540 514 579 6.28E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 SUPERFAMILY SSF52540 727 847 6.28E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30155 4bb45dd41517a6e722ae9507178710fc 912 SUPERFAMILY SSF52540 615 647 6.28E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 Gene3D G3DSA:2.30.40.10 2 67 1.3E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 Pfam PF13382 Adenine deaminase C-terminal domain 378 543 2.3E-60 T 23-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 SUPERFAMILY SSF51338 1 47 2.67E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 SUPERFAMILY SSF51338 299 334 2.67E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 Pfam PF01979 Amidohydrolase family 44 330 1.5E-25 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 Hamap MF_01518 Adenine deaminase [ade]. 1 547 32.459 T 23-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 PANTHER PTHR11113 372 542 1.8E-148 T 23-04-2016 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 PANTHER PTHR11113 5 332 1.8E-148 T 23-04-2016 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 PANTHER PTHR11113:SF2 372 542 1.8E-148 T 23-04-2016 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 PANTHER PTHR11113:SF2 5 332 1.8E-148 T 23-04-2016 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 SUPERFAMILY SSF51556 48 296 1.42E-27 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 TIGRFAM TIGR01178 ade: adenine deaminase 5 544 8.0E-179 T 23-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 NIAKO_RS34575 968d48655e2b6e17495f5f691802a76e 551 Gene3D G3DSA:2.30.40.10 239 334 1.0E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 Pfam PF03734 L,D-transpeptidase catalytic domain 290 455 1.8E-25 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 SUPERFAMILY SSF141523 289 342 1.31E-17 T 23-04-2016 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 SUPERFAMILY SSF141523 396 445 1.31E-17 T 23-04-2016 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 PANTHER PTHR41533 1 508 5.8E-67 T 23-04-2016 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 Gene3D G3DSA:2.40.440.10 398 445 1.2E-9 T 23-04-2016 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 Gene3D G3DSA:2.40.440.10 289 333 1.2E-9 T 23-04-2016 NIAKO_RS36580 32d0ddc15f8ced9a396a2a79bbd2e6a7 520 PANTHER PTHR41533:SF1 1 508 5.8E-67 T 23-04-2016 NIAKO_RS35470 5c9262823c63aa48f398e5564b3028e1 190 PANTHER PTHR38011 2 190 3.9E-32 T 23-04-2016 NIAKO_RS35470 5c9262823c63aa48f398e5564b3028e1 190 Pfam PF01872 RibD C-terminal domain 2 183 1.9E-22 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS35470 5c9262823c63aa48f398e5564b3028e1 190 Gene3D G3DSA:3.40.430.10 2 189 8.2E-28 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS35470 5c9262823c63aa48f398e5564b3028e1 190 SUPERFAMILY SSF53597 1 189 5.24E-33 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS35470 5c9262823c63aa48f398e5564b3028e1 190 PANTHER PTHR38011:SF2 2 190 3.9E-32 T 23-04-2016 NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 SUPERFAMILY SSF51735 1 164 1.14E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 Gene3D G3DSA:3.30.360.10 120 279 6.3E-24 T 23-04-2016 NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 SUPERFAMILY SSF55347 115 339 9.81E-47 T 23-04-2016 NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 95 1.1E-7 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 Gene3D G3DSA:3.40.50.720 3 119 9.4E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS13050 73307e96d1415d956ce24ad3450423f9 352 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 114 334 7.8E-18 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 PANTHER PTHR18901 3 207 6.1E-63 T 23-04-2016 NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 Gene3D G3DSA:3.40.50.1000 2 16 6.8E-29 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 Gene3D G3DSA:3.40.50.1000 81 207 6.8E-29 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 SUPERFAMILY SSF56784 1 207 2.0E-41 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 171 6.9E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 177 4.0E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS26455 2fea3d2b0549921fcee35fdfa727a31c 211 PANTHER PTHR18901:SF41 3 207 6.1E-63 T 23-04-2016 NIAKO_RS26520 8b524e78fc8cc5d86f211f329bfcb8fe 423 Gene3D G3DSA:2.60.120.260 258 421 2.0E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS26520 8b524e78fc8cc5d86f211f329bfcb8fe 423 Pfam PF17166 Domain of unknown function (DUF5126) 124 226 1.7E-36 T 23-04-2016 IPR033431 Domain of unknown function DUF5126 NIAKO_RS26520 8b524e78fc8cc5d86f211f329bfcb8fe 423 SUPERFAMILY SSF49785 258 335 3.64E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS26520 8b524e78fc8cc5d86f211f329bfcb8fe 423 Pfam PF16391 Domain of unknown function 268 420 3.3E-46 T 23-04-2016 IPR032164 Domain of unknown function DUF5000 NIAKO_RS26520 8b524e78fc8cc5d86f211f329bfcb8fe 423 Pfam PF16323 Domain of unknown function (DUF4959) 21 123 2.0E-37 T 23-04-2016 IPR032527 Domain of unknown function DUF4959 NIAKO_RS03160 470cf81fe299b84c7294ca583506d5a8 127 Gene3D G3DSA:3.10.180.10 5 125 2.9E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS03160 470cf81fe299b84c7294ca583506d5a8 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 100 1.0E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS03160 470cf81fe299b84c7294ca583506d5a8 127 SUPERFAMILY SSF54593 4 124 8.46E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS03160 470cf81fe299b84c7294ca583506d5a8 127 PANTHER PTHR33993 1 127 3.7E-36 T 23-04-2016 NIAKO_RS03160 470cf81fe299b84c7294ca583506d5a8 127 PANTHER PTHR33993:SF4 1 127 3.7E-36 T 23-04-2016 NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 PANTHER PTHR11715 1 120 6.2E-62 T 23-04-2016 IPR002930 Glycine cleavage system H-protein NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 Pfam PF01597 Glycine cleavage H-protein 7 123 1.6E-44 T 23-04-2016 IPR002930 Glycine cleavage system H-protein NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 SUPERFAMILY SSF51230 2 124 5.23E-43 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 Gene3D G3DSA:2.40.50.100 6 124 5.8E-49 T 23-04-2016 NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 28.566 T 23-04-2016 IPR002930 Glycine cleavage system H-protein NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 1.3E-46 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 NIAKO_RS28310 cd5c5ab0d5aca1d669e78d39a4d17d79 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIAKO_RS28755 705674b848e2d75203fb17cfadc99c11 308 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 277 3.7E-26 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS28755 705674b848e2d75203fb17cfadc99c11 308 PANTHER PTHR30213 12 288 7.9E-64 T 23-04-2016 NIAKO_RS28755 705674b848e2d75203fb17cfadc99c11 308 Pfam PF03631 Virulence factor BrkB 23 279 7.6E-56 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS28755 705674b848e2d75203fb17cfadc99c11 308 PANTHER PTHR30213:SF1 12 288 7.9E-64 T 23-04-2016 NIAKO_RS28755 705674b848e2d75203fb17cfadc99c11 308 PIRSF PIRSF035875 4 297 1.7E-69 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 PANTHER PTHR23501:SF79 12 386 1.0E-96 T 23-04-2016 NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 PANTHER PTHR23501 12 386 1.0E-96 T 23-04-2016 NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 Gene3D G3DSA:1.20.1250.20 209 385 7.3E-9 T 23-04-2016 NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 Gene3D G3DSA:1.20.1250.20 15 189 4.2E-25 T 23-04-2016 NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 Pfam PF07690 Major Facilitator Superfamily 27 350 1.5E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS05895 6cf07621ecfba5df779bac3191cabd63 389 SUPERFAMILY SSF103473 6 386 3.79E-48 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00412 Epoxide hydrolase signature 142 155 4.2E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00412 Epoxide hydrolase signature 128 141 4.2E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00412 Epoxide hydrolase signature 84 99 4.2E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00412 Epoxide hydrolase signature 295 317 4.2E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00412 Epoxide hydrolase signature 64 82 4.2E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PANTHER PTHR10992:SF771 283 319 1.3E-51 T 23-04-2016 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PANTHER PTHR10992:SF771 26 263 1.3E-51 T 23-04-2016 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PANTHER PTHR10992 283 319 1.3E-51 T 23-04-2016 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PANTHER PTHR10992 26 263 1.3E-51 T 23-04-2016 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 248 262 8.0E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 8.0E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 99 8.0E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 8.0E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 Pfam PF00561 alpha/beta hydrolase fold 59 307 1.5E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 SUPERFAMILY SSF53474 34 319 2.39E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07760 19813eb88ff85a92f7b6706c2cc9c725 319 Gene3D G3DSA:3.40.50.1820 25 319 8.7E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 PANTHER PTHR18895:SF60 21 182 3.0E-21 T 23-04-2016 NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 SUPERFAMILY SSF53335 1 176 1.52E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 Pfam PF03602 Conserved hypothetical protein 95 1 176 1.4E-37 T 23-04-2016 NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 Gene3D G3DSA:3.40.50.150 1 180 1.2E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 PANTHER PTHR18895 21 182 3.0E-21 T 23-04-2016 NIAKO_RS04465 e75f44e2edc2594c2bc20e82fda3fde8 183 PIRSF PIRSF004553 1 180 2.5E-40 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 Pfam PF12867 DinB superfamily 7 137 1.8E-10 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 4 304 1.5E-113 T 23-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 Pfam PF03781 Sulfatase-modifying factor enzyme 1 169 318 4.5E-25 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 Gene3D G3DSA:3.90.1580.10 310 380 4.3E-12 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 Gene3D G3DSA:3.90.1580.10 164 309 1.1E-37 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 PANTHER PTHR23150 4 382 1.2E-86 T 23-04-2016 NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 SUPERFAMILY SSF109854 3 135 3.89E-6 T 23-04-2016 NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 PANTHER PTHR23150:SF24 4 382 1.2E-86 T 23-04-2016 NIAKO_RS20620 c189b99583633bfbc7a21661c9f63588 383 SUPERFAMILY SSF56436 168 380 6.03E-60 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 Gene3D G3DSA:3.30.1330.80 111 232 1.8E-31 T 23-04-2016 NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 PANTHER PTHR35524 2 266 3.8E-56 T 23-04-2016 NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 35 256 1.2E-54 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 PIRSF PIRSF001332 18 265 1.4E-62 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 Pfam PF03306 Alpha-acetolactate decarboxylase 35 253 4.8E-67 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 NIAKO_RS01300 5296a71050884c1fa42fc1d3653575ba 272 SUPERFAMILY SSF117856 34 264 3.4E-60 T 23-04-2016 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PANTHER PTHR23359 2 192 7.7E-76 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 Hamap MF_00235 Adenylate kinase [adk]. 2 188 41.552 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 SUPERFAMILY SSF52540 2 188 1.48E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 Pfam PF00406 Adenylate kinase 6 164 1.6E-52 T 23-04-2016 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PRINTS PR00094 Adenylate kinase signature 82 98 1.1E-25 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PRINTS PR00094 Adenylate kinase signature 5 18 1.1E-25 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PRINTS PR00094 Adenylate kinase signature 33 47 1.1E-25 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PRINTS PR00094 Adenylate kinase signature 152 166 1.1E-25 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 PRINTS PR00094 Adenylate kinase signature 135 150 1.1E-25 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 Gene3D G3DSA:3.40.50.300 3 189 7.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29900 de76f6b7bee9b32999de330fd0707228 193 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 Gene3D G3DSA:3.40.50.2300 2 119 2.7E-27 T 23-04-2016 NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 SMART SM00448 3 115 1.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 PANTHER PTHR26402:SF102 3 119 4.5E-24 T 23-04-2016 NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 Pfam PF00072 Response regulator receiver domain 5 115 5.4E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 SUPERFAMILY SSF52172 3 119 9.11E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS01205 f32d58c1d4c0a42eae2734c9e0410853 120 PANTHER PTHR26402 3 119 4.5E-24 T 23-04-2016 NIAKO_RS27260 cd8f34d9a7e9874ea12fa7e80db999e1 157 PANTHER PTHR39961:SF1 1 157 1.7E-19 T 23-04-2016 NIAKO_RS27260 cd8f34d9a7e9874ea12fa7e80db999e1 157 Pfam PF04308 Ribonuclease H-like 16 155 5.1E-42 T 23-04-2016 IPR007405 Bacteriophage KVP40, Orf299 NIAKO_RS27260 cd8f34d9a7e9874ea12fa7e80db999e1 157 PANTHER PTHR39961 1 157 1.7E-19 T 23-04-2016 NIAKO_RS19210 545a14c90804ad4c09a4d34827563da7 112 Gene3D G3DSA:3.30.70.1060 1 111 4.4E-24 T 23-04-2016 NIAKO_RS19210 545a14c90804ad4c09a4d34827563da7 112 Pfam PF03795 YCII-related domain 21 111 4.9E-12 T 23-04-2016 IPR005545 YCII-related NIAKO_RS19210 545a14c90804ad4c09a4d34827563da7 112 SUPERFAMILY SSF54909 4 111 1.07E-17 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS19210 545a14c90804ad4c09a4d34827563da7 112 PANTHER PTHR35174 3 111 8.8E-17 T 23-04-2016 NIAKO_RS21975 83f6239c4daf9f83b600ba2cd68bec54 73 Pfam PF04024 PspC domain 13 56 1.5E-5 T 23-04-2016 IPR007168 Phage shock protein, PspC, N-terminal NIAKO_RS31905 24c724b956de856a3dd5ea461f95fbf3 118 Gene3D G3DSA:1.10.10.10 12 100 4.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31905 24c724b956de856a3dd5ea461f95fbf3 118 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 14 96 2.2E-21 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS31905 24c724b956de856a3dd5ea461f95fbf3 118 PANTHER PTHR10815:SF2 3 113 1.3E-27 T 23-04-2016 NIAKO_RS31905 24c724b956de856a3dd5ea461f95fbf3 118 PANTHER PTHR10815 3 113 1.3E-27 T 23-04-2016 NIAKO_RS31905 24c724b956de856a3dd5ea461f95fbf3 118 SUPERFAMILY SSF46767 13 96 1.83E-18 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 Pfam PF00072 Response regulator receiver domain 6 109 6.6E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 Gene3D G3DSA:3.40.50.2300 1 123 6.9E-26 T 23-04-2016 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 SMART SM00850 139 232 1.7E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 SMART SM00448 2 110 1.0E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 SUPERFAMILY SSF52172 1 126 3.13E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 Pfam PF04397 LytTr DNA-binding domain 141 229 1.1E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 PANTHER PTHR26402 2 121 5.7E-27 T 23-04-2016 NIAKO_RS07290 50200e757759932d043004f8fc565b74 235 Gene3D G3DSA:2.40.50.40 132 199 2.6E-18 T 23-04-2016 NIAKO_RS28955 5ccdeed36ef0680b2889523b76d08dc8 666 Gene3D G3DSA:2.130.10.140 64 221 9.2E-17 T 23-04-2016 NIAKO_RS28955 5ccdeed36ef0680b2889523b76d08dc8 666 SUPERFAMILY SSF110296 28 260 1.44E-20 T 23-04-2016 NIAKO_RS28955 5ccdeed36ef0680b2889523b76d08dc8 666 Pfam PF14870 Photosynthesis system II assembly factor YCF48 119 207 2.7E-7 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 Pfam PF04542 Sigma-70 region 2 21 86 2.0E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 Pfam PF08281 Sigma-70, region 4 114 168 9.5E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 171 1.7E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 SUPERFAMILY SSF88946 7 91 1.44E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 PANTHER PTHR30173:SF24 6 180 9.7E-32 T 23-04-2016 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 Gene3D G3DSA:1.10.10.10 111 174 1.5E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 PANTHER PTHR30173 6 180 9.7E-32 T 23-04-2016 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 Gene3D G3DSA:1.10.1740.10 7 92 8.6E-22 T 23-04-2016 NIAKO_RS36835 0ea41ce0cfac456991192380dc751a91 309 SUPERFAMILY SSF88659 104 173 1.53E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06620 7b1fe3e22c4d666055b32200a5256e7e 644 Gene3D G3DSA:2.115.10.20 271 309 3.7E-4 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS06620 7b1fe3e22c4d666055b32200a5256e7e 644 Gene3D G3DSA:2.115.10.20 379 503 3.7E-4 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS06620 7b1fe3e22c4d666055b32200a5256e7e 644 Pfam PF16396 Domain of unknown function (DUF5005) 202 261 1.9E-7 T 23-04-2016 IPR032169 Protein of unknown function DUF5005 NIAKO_RS06620 7b1fe3e22c4d666055b32200a5256e7e 644 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 566 644 1.2E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 Pfam PF16344 Domain of unknown function (DUF4974) 256 376 8.2E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 Pfam PF04773 FecR protein 142 243 2.4E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 PANTHER PTHR30273:SF2 299 377 1.5E-59 T 23-04-2016 NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 PANTHER PTHR30273:SF2 97 278 1.5E-59 T 23-04-2016 NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 PANTHER PTHR30273 299 377 1.5E-59 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS30070 197300543553e5f73ff2e909053d8a93 379 PANTHER PTHR30273 97 278 1.5E-59 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 Pfam PF07676 WD40-like Beta Propeller Repeat 308 333 1.9E-5 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 PRINTS PR01021 OMPA domain signature 526 542 1.2E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 PRINTS PR01021 OMPA domain signature 481 503 1.2E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 PRINTS PR01021 OMPA domain signature 511 526 1.2E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 Gene3D G3DSA:1.25.40.10 25 154 5.0E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 SUPERFAMILY SSF48452 23 149 7.59E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 Gene3D G3DSA:3.30.1330.60 467 588 1.2E-40 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 SUPERFAMILY SSF82171 169 378 2.22E-11 T 23-04-2016 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 SUPERFAMILY SSF103088 461 587 5.1E-35 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 Pfam PF00691 OmpA family 480 569 6.1E-21 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 Gene3D G3DSA:2.130.10.10 188 374 6.1E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS13700 45ebc334a8973ea60d729199c9e74db7 590 PANTHER PTHR30128 461 588 4.7E-42 T 23-04-2016 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 PANTHER PTHR10520 1 195 1.6E-64 T 23-04-2016 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 SUPERFAMILY SSF53328 5 188 6.8E-44 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 PANTHER PTHR10520:SF9 1 195 1.6E-64 T 23-04-2016 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 24.037 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 Gene3D G3DSA:3.40.50.170 5 188 1.4E-48 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS31820 84f1683f3a5e61e2e49fc04b31249446 196 Pfam PF00551 Formyl transferase 5 182 7.3E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 Pfam PF12704 MacB-like periplasmic core domain 20 246 5.9E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 Pfam PF12704 MacB-like periplasmic core domain 448 660 2.6E-9 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 Pfam PF02687 FtsX-like permease family 296 414 5.2E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 Pfam PF02687 FtsX-like permease family 696 805 4.9E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 PANTHER PTHR30572 413 816 1.5E-86 T 23-04-2016 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 PANTHER PTHR30572 294 362 1.5E-86 T 23-04-2016 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 PANTHER PTHR30572:SF4 413 816 1.5E-86 T 23-04-2016 NIAKO_RS25585 71ce81f9c0412673d8e2383c64c8dfd4 816 PANTHER PTHR30572:SF4 294 362 1.5E-86 T 23-04-2016 NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 SUPERFAMILY SSF49899 200 445 8.6E-26 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Gene3D G3DSA:2.60.120.200 205 443 5.0E-24 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 SUPERFAMILY SSF81296 121 192 4.58E-10 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Pfam PF01833 IPT/TIG domain 129 190 2.1E-8 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Pfam PF01833 IPT/TIG domain 44 115 2.8E-5 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 SUPERFAMILY SSF81296 34 108 2.04E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Gene3D G3DSA:2.60.40.10 121 190 1.6E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Gene3D G3DSA:2.60.40.10 37 110 6.9E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS35175 eb339e69bf00c831ff1051025394afc3 448 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 261 439 1.3E-18 T 23-04-2016 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 PANTHER PTHR11374 1 396 2.6E-148 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Gene3D G3DSA:3.40.50.720 1 191 2.7E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 PANTHER PTHR11374:SF22 1 396 2.6E-148 T 23-04-2016 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 SUPERFAMILY SSF48179 203 297 4.87E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 PIRSF PIRSF500134 1 434 1.6E-101 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 297 1.4E-26 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Gene3D G3DSA:3.40.50.720 235 428 2.2E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 SUPERFAMILY SSF51735 1 192 3.1E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 421 5.7E-12 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 SUPERFAMILY SSF52413 304 431 3.66E-18 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 SMART SM00984 316 424 6.3E-10 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 5.6E-54 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 417 1.4E-111 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 Gene3D G3DSA:1.20.5.100 203 232 2.2E-12 T 23-04-2016 NIAKO_RS34940 39be20386671ddb8d8bfc96005e12d35 435 PIRSF PIRSF000124 1 435 2.0E-107 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 PANTHER PTHR21148:SF26 1 374 3.1E-147 T 23-04-2016 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 369 50.986 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 133 370 1.1E-81 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 376 1.1E-140 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 Gene3D G3DSA:3.20.20.105 2 375 2.3E-151 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 376 1.9E-147 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 PANTHER PTHR21148 1 374 3.1E-147 T 23-04-2016 NIAKO_RS26850 a29442dadad7216605bf16bfdc7ae6b8 379 SUPERFAMILY SSF51713 3 372 2.49E-146 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 PANTHER PTHR11587:SF2 3 400 1.1E-101 T 23-04-2016 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 Gene3D G3DSA:3.90.1260.10 174 397 2.1E-53 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 SUPERFAMILY SSF52402 3 186 5.95E-36 T 23-04-2016 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 SUPERFAMILY SSF69864 174 394 3.27E-55 T 23-04-2016 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 PANTHER PTHR11587 3 400 1.1E-101 T 23-04-2016 NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 Gene3D G3DSA:3.40.50.620 3 167 1.1E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS28015 a0241b52986cceb4c9936eba7218f309 400 Pfam PF00764 Arginosuccinate synthase 6 390 9.2E-80 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 382 8.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 328 8.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 8.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 342 8.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 SUPERFAMILY SSF55874 235 381 2.36E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 SUPERFAMILY SSF47384 172 221 6.87E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 Gene3D G3DSA:3.30.565.10 239 381 2.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PANTHER PTHR24423 173 381 3.6E-38 T 23-04-2016 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 PANTHER PTHR24423 32 48 3.6E-38 T 23-04-2016 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 382 1.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 Gene3D G3DSA:1.10.287.130 179 222 2.1E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS02525 36bf8ceb953cb6811520ab068d7c11bf 382 SMART SM00387 277 382 2.8E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 SMART SM00138 4 267 1.1E-42 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 SUPERFAMILY SSF53335 70 249 1.26E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 260 7.7E-38 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 SUPERFAMILY SSF47757 3 69 5.89E-8 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 Gene3D G3DSA:1.10.155.10 3 68 1.1E-5 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 Gene3D G3DSA:3.40.50.150 69 265 2.9E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PANTHER PTHR24422 2 268 6.9E-94 T 23-04-2016 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 56 3.1E-10 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 5.6E-27 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PRINTS PR00996 Glutamate methyltransferase family signature 131 147 5.6E-27 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PRINTS PR00996 Glutamate methyltransferase family signature 224 247 5.6E-27 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PRINTS PR00996 Glutamate methyltransferase family signature 205 219 5.6E-27 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PRINTS PR00996 Glutamate methyltransferase family signature 99 119 5.6E-27 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13450 d70d4f3f7a392922dfc92472a1c17735 270 PANTHER PTHR24422:SF8 2 268 6.9E-94 T 23-04-2016 NIAKO_RS19605 ee23b09fcf0e233e7c96e9211be21eb3 347 Pfam PF03432 Relaxase/Mobilisation nuclease domain 9 240 1.0E-27 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 Pfam PF00171 Aldehyde dehydrogenase family 16 469 2.9E-134 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 PANTHER PTHR11699:SF27 6 478 8.3E-220 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 475 7.6E-157 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 Gene3D G3DSA:3.40.605.10 5 261 4.2E-86 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 PANTHER PTHR11699 6 478 8.3E-220 T 23-04-2016 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 Gene3D G3DSA:3.40.309.10 262 436 2.0E-55 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS02235 d9fe8b4c2173054d1db39b42328da5bf 485 SUPERFAMILY SSF53720 3 477 5.5E-135 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 333 548 3.5E-64 T 23-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 PANTHER PTHR11468:SF9 19 547 2.2E-104 T 23-04-2016 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 SUPERFAMILY SSF53756 7 548 4.04E-119 T 23-04-2016 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 Pfam PF00343 Carbohydrate phosphorylase 305 465 2.7E-13 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 Gene3D G3DSA:3.40.50.2000 33 77 1.1E-8 T 23-04-2016 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 Gene3D G3DSA:3.40.50.2000 311 549 9.9E-54 T 23-04-2016 NIAKO_RS09300 31b9b7eb8d1ab4b51e48ed44a5b49e8c 566 PANTHER PTHR11468 19 547 2.2E-104 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NIAKO_RS21930 01beab1fb2f7ed668ddda2e04e8ca185 422 Gene3D G3DSA:1.20.1600.10 14 420 4.7E-32 T 23-04-2016 NIAKO_RS21930 01beab1fb2f7ed668ddda2e04e8ca185 422 SUPERFAMILY SSF56954 6 420 2.22E-43 T 23-04-2016 NIAKO_RS21930 01beab1fb2f7ed668ddda2e04e8ca185 422 Pfam PF02321 Outer membrane efflux protein 26 209 9.6E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS21930 01beab1fb2f7ed668ddda2e04e8ca185 422 Pfam PF02321 Outer membrane efflux protein 241 418 2.1E-5 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 PANTHER PTHR35008 22 254 7.8E-35 T 23-04-2016 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 Pfam PF00034 Cytochrome c 161 248 4.0E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 SUPERFAMILY SSF46626 29 138 7.53E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 PANTHER PTHR35008:SF4 22 254 7.8E-35 T 23-04-2016 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 Gene3D G3DSA:1.10.760.10 23 138 6.5E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 Gene3D G3DSA:1.10.760.10 155 252 6.3E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS32105 d66454aeecb39b42eb32ccfaed15f59f 298 SUPERFAMILY SSF46626 156 253 5.87E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS13540 09c47b606b9d5daac7c65904396452da 765 SUPERFAMILY SSF48371 507 744 4.53E-6 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 SUPERFAMILY SSF55486 195 407 3.67E-10 T 23-04-2016 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 899 972 5.7E-15 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 SMART SM00060 672 749 3.5E-7 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Gene3D G3DSA:3.40.390.10 196 408 8.6E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Pfam PF00041 Fibronectin type III domain 673 747 2.4E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 SUPERFAMILY SSF49265 673 760 7.79E-15 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 195 401 1.1E-37 T 23-04-2016 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 798 862 2.3E-9 T 23-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 SUPERFAMILY SSF89260 779 877 1.57E-13 T 23-04-2016 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Gene3D G3DSA:2.60.120.380 769 878 2.3E-23 T 23-04-2016 NIAKO_RS12270 f1350ef9a6a177f29289c98860d33a23 972 Gene3D G3DSA:2.60.40.10 673 754 5.4E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 Gene3D G3DSA:1.10.1040.10 183 436 1.8E-95 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 SUPERFAMILY SSF51735 6 176 2.72E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 SMART SM01350 181 470 6.5E-177 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 122 147 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 359 381 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 6 29 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 69 98 2.3E-76 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 469 6.7E-117 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 SUPERFAMILY SSF48179 180 471 2.93E-111 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 7 470 1.1E-184 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 Gene3D G3DSA:3.40.50.720 5 182 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 1.1E-48 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PANTHER PTHR11811 7 472 5.9E-246 T 23-04-2016 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PANTHER PTHR11811:SF25 7 472 5.9E-246 T 23-04-2016 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 PIRSF PIRSF000109 1 472 5.3E-192 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS32005 54541ce626a5cb4d37c1c12d2fc1d346 472 Gene3D G3DSA:1.20.5.320 438 470 9.7E-21 T 23-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PANTHER PTHR24322:SF513 148 179 6.8E-50 T 23-04-2016 NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PANTHER PTHR24322:SF513 7 132 6.8E-50 T 23-04-2016 NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 SUPERFAMILY SSF51735 2 244 1.09E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PANTHER PTHR24322 148 179 6.8E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PANTHER PTHR24322 7 132 6.8E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 Pfam PF00106 short chain dehydrogenase 3 187 1.4E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS01390 389b26d4ef3edc983342ed745482875f 294 Gene3D G3DSA:3.40.50.720 2 245 3.5E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS35830 bf256b2cdac080f113e870943f850faf 469 PANTHER PTHR34599 158 456 8.0E-35 T 23-04-2016 NIAKO_RS35830 bf256b2cdac080f113e870943f850faf 469 PANTHER PTHR34599:SF1 158 456 8.0E-35 T 23-04-2016 NIAKO_RS35830 bf256b2cdac080f113e870943f850faf 469 Gene3D G3DSA:1.10.606.10 199 461 5.1E-80 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS35830 bf256b2cdac080f113e870943f850faf 469 SUPERFAMILY SSF48317 191 457 1.83E-42 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS35830 bf256b2cdac080f113e870943f850faf 469 Pfam PF01569 PAP2 superfamily 332 442 3.6E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 SUPERFAMILY SSF49785 255 371 1.94E-24 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 PANTHER PTHR22901:SF0 374 646 1.7E-175 T 23-04-2016 NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 PANTHER PTHR22901:SF0 1 222 1.7E-175 T 23-04-2016 NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 101 532 1.7E-99 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 PANTHER PTHR22901 374 646 1.7E-175 T 23-04-2016 NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 PANTHER PTHR22901 1 222 1.7E-175 T 23-04-2016 NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 SUPERFAMILY SSF52266 408 592 5.95E-80 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 SUPERFAMILY SSF52266 100 206 5.95E-80 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 Gene3D G3DSA:2.60.120.260 55 79 6.6E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS07240 ea13dc4e4c2437af0a72617a61aaf134 657 Gene3D G3DSA:2.60.120.260 254 363 6.6E-22 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 Pfam PF01204 Trehalase 40 521 6.5E-146 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 ProSitePatterns PS00927 Trehalase signature 1. 134 147 - T 23-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 ProSitePatterns PS00928 Trehalase signature 2. 434 443 - T 23-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PANTHER PTHR23403:SF13 4 521 4.6E-210 T 23-04-2016 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 SUPERFAMILY SSF48208 25 522 3.4E-152 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 251 268 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 359 375 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 427 443 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 316 333 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 504 517 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 176 194 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 284 301 1.7E-42 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS32930 d181f94da4971e46e9b45f4802b915f7 524 PANTHER PTHR23403 4 521 4.6E-210 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 PANTHER PTHR11019:SF11 28 278 5.3E-26 T 23-04-2016 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 SUPERFAMILY SSF51215 22 140 1.12E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 Gene3D G3DSA:1.10.10.60 173 228 5.8E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 Gene3D G3DSA:2.60.120.280 22 157 3.3E-10 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 Pfam PF12833 Helix-turn-helix domain 199 276 1.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 SMART SM00342 192 275 1.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 Gene3D G3DSA:1.10.10.60 235 278 1.1E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 SUPERFAMILY SSF46689 229 277 2.28E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 PANTHER PTHR11019 28 278 5.3E-26 T 23-04-2016 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 SUPERFAMILY SSF46689 177 225 8.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08475 4936f722f73d88de8e7c565755184cb2 279 Pfam PF02311 AraC-like ligand binding domain 18 81 8.4E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PANTHER PTHR22939:SF79 13 230 2.3E-61 T 23-04-2016 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 Pfam PF13180 PDZ domain 159 227 5.2E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 Gene3D G3DSA:2.30.42.10 136 230 1.1E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 SMART SM00228 134 219 2.1E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 SUPERFAMILY SSF50156 104 226 2.76E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 Gene3D G3DSA:2.40.10.10 19 135 9.7E-38 T 23-04-2016 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PANTHER PTHR22939 13 230 2.3E-61 T 23-04-2016 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 Pfam PF13365 Trypsin-like peptidase domain 8 95 4.4E-18 T 23-04-2016 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 SUPERFAMILY SSF50494 12 141 1.84E-30 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PRINTS PR00834 HtrA/DegQ protease family signature 27 51 1.1E-29 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PRINTS PR00834 HtrA/DegQ protease family signature 66 83 1.1E-29 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PRINTS PR00834 HtrA/DegQ protease family signature 88 105 1.1E-29 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS19785 c4409b1d7c75802d3a643d49ac6e8426 231 PRINTS PR00834 HtrA/DegQ protease family signature 177 189 1.1E-29 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 PIRSF PIRSF006325 5 235 1.0E-52 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 SUPERFAMILY SSF53335 19 231 8.22E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 PANTHER PTHR10108:SF809 8 228 4.5E-15 T 23-04-2016 NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 PANTHER PTHR10108 8 228 4.5E-15 T 23-04-2016 NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 Gene3D G3DSA:3.40.50.150 19 234 9.4E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18665 8f33bc2d283a4372b877ccf228398b80 235 Pfam PF13649 Methyltransferase domain 58 151 2.4E-12 T 23-04-2016 NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 PANTHER PTHR10849:SF13 1 149 1.2E-33 T 23-04-2016 NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 112 123 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 Pfam PF12838 4Fe-4S dicluster domain 68 126 4.3E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 Gene3D G3DSA:3.30.70.20 60 129 4.9E-15 T 23-04-2016 NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 SUPERFAMILY SSF54862 48 147 1.63E-21 T 23-04-2016 NIAKO_RS35510 6765b2953e5f63323d0e3b2fab9bd4ee 159 PANTHER PTHR10849 1 149 1.2E-33 T 23-04-2016 NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 Gene3D G3DSA:3.20.20.70 306 433 4.6E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 SUPERFAMILY SSF51445 297 503 2.84E-17 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 PANTHER PTHR35803 1 647 2.6E-166 T 23-04-2016 NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 28 288 1.5E-51 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 PANTHER PTHR35803:SF2 1 647 2.6E-166 T 23-04-2016 NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 Pfam PF10566 Glycoside hydrolase 97 295 553 4.1E-67 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS11900 4957181199a71022f160961d45ab5813 647 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 556 646 7.7E-18 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS07170 40f8862a2b943eb3d2ae97bf50864153 308 PANTHER PTHR40446:SF1 176 305 1.8E-16 T 23-04-2016 NIAKO_RS07170 40f8862a2b943eb3d2ae97bf50864153 308 PANTHER PTHR40446 176 305 1.8E-16 T 23-04-2016 NIAKO_RS07170 40f8862a2b943eb3d2ae97bf50864153 308 Pfam PF09992 Phosphodiester glycosidase 92 305 3.5E-35 T 23-04-2016 IPR018711 Phosphodiester glycosidase NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 Gene3D G3DSA:3.40.1160.10 108 291 2.3E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 Gene3D G3DSA:3.40.1160.10 1 51 2.3E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 SUPERFAMILY SSF53633 1 291 2.34E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 PIRSF PIRSF000726 1 439 3.7E-91 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 PANTHER PTHR21499:SF3 3 438 1.9E-114 T 23-04-2016 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 SUPERFAMILY SSF55021 297 383 5.57E-17 T 23-04-2016 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 437 2.1E-89 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 SUPERFAMILY SSF55021 366 438 1.76E-11 T 23-04-2016 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 Pfam PF00696 Amino acid kinase family 2 277 4.8E-37 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS24830 f2bb8c9cfd37b69bd0d22c4800b04fe0 441 PANTHER PTHR21499 3 438 1.9E-114 T 23-04-2016 NIAKO_RS30340 41b33e0f9ba4d480f37dd646be994a3c 376 PANTHER PTHR11118 235 373 3.6E-12 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS30340 41b33e0f9ba4d480f37dd646be994a3c 376 PANTHER PTHR11118:SF1 235 373 3.6E-12 T 23-04-2016 NIAKO_RS30340 41b33e0f9ba4d480f37dd646be994a3c 376 SUPERFAMILY SSF103365 6 372 6.93E-46 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS30340 41b33e0f9ba4d480f37dd646be994a3c 376 Pfam PF01139 tRNA-splicing ligase RtcB 106 372 6.1E-25 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 61 87 4.5E-12 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 105 127 4.5E-12 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 257 277 4.5E-12 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 278 295 4.5E-12 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 226 244 4.5E-12 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 Gene3D G3DSA:1.10.287.70 60 147 1.1E-12 T 23-04-2016 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PANTHER PTHR11767:SF58 29 294 1.1E-30 T 23-04-2016 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 PANTHER PTHR11767 29 294 1.1E-30 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 SUPERFAMILY SSF81296 138 318 3.78E-40 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 Gene3D G3DSA:2.60.40.1400 148 318 4.3E-37 T 23-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 Pfam PF01007 Inward rectifier potassium channel 50 318 3.5E-30 T 23-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 NIAKO_RS12885 62534810ef413fe0be682e7fb3516021 320 SUPERFAMILY SSF81324 51 161 3.53E-15 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:2.40.40.20 573 668 1.5E-4 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 4 53 1.3E-13 T 23-04-2016 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938 768 806 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938 933 951 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938 967 1040 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938 826 890 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Pfam PF13247 4Fe-4S dicluster domain 831 892 9.9E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:3.30.70.20 843 892 1.5E-17 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 SUPERFAMILY SSF54862 936 1028 4.4E-49 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 SUPERFAMILY SSF54862 771 890 4.4E-49 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:3.30.70.20 937 1021 6.7E-37 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:3.30.70.20 771 842 6.7E-37 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 SUPERFAMILY SSF53706 106 492 6.54E-31 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:3.40.50.740 346 487 1.0E-15 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 Gene3D G3DSA:3.40.50.740 161 209 1.0E-15 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938:SF86 768 806 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938:SF86 933 951 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938:SF86 967 1040 7.6E-42 T 23-04-2016 NIAKO_RS31830 b98dde34fc4e03ac93f7131b6fb143fd 1058 PANTHER PTHR11938:SF86 826 890 7.6E-42 T 23-04-2016 NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 SUPERFAMILY SSF56436 76 381 1.36E-92 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 Gene3D G3DSA:3.90.1580.10 72 381 2.6E-98 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 PANTHER PTHR23150:SF23 182 380 6.4E-101 T 23-04-2016 NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 PANTHER PTHR23150:SF23 78 165 6.4E-101 T 23-04-2016 NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 Pfam PF03781 Sulfatase-modifying factor enzyme 1 75 381 2.6E-84 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 PANTHER PTHR23150 182 380 6.4E-101 T 23-04-2016 NIAKO_RS00940 afedf3d5ba7fbdfab1296544308bda48 382 PANTHER PTHR23150 78 165 6.4E-101 T 23-04-2016 NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 SUPERFAMILY SSF52266 25 217 2.54E-32 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 518 688 2.3E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 31 205 3.6E-21 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 SUPERFAMILY SSF53474 255 470 7.3E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 PANTHER PTHR30383 9 221 3.5E-17 T 23-04-2016 NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 SUPERFAMILY SSF52266 496 702 7.94E-35 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 Gene3D G3DSA:3.40.50.1110 27 215 4.7E-33 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 Gene3D G3DSA:3.40.50.1110 494 702 2.4E-40 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS35460 4d72cdc1173bf18b7a92d3cedd7c6870 705 Gene3D G3DSA:3.40.50.1820 269 458 5.6E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 Gene3D G3DSA:3.30.70.1150 87 162 2.5E-14 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 Gene3D G3DSA:3.30.70.260 6 79 1.0E-20 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 Pfam PF10369 Small subunit of acetolactate synthase 87 160 9.0E-19 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 Pfam PF01842 ACT domain 7 70 3.0E-9 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 SUPERFAMILY SSF55021 6 78 2.29E-14 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 SUPERFAMILY SSF55021 80 161 1.08E-15 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 7 160 4.4E-29 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 7 75 5.0E-12 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 PANTHER PTHR30239 7 158 9.1E-31 T 23-04-2016 NIAKO_RS00505 c7b0afe6e0d16e532cd091791e13ef35 196 PANTHER PTHR30239:SF0 7 158 9.1E-31 T 23-04-2016 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 SUPERFAMILY SSF53067 1 103 1.73E-26 T 23-04-2016 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 SUPERFAMILY SSF53067 120 219 1.68E-8 T 23-04-2016 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 PANTHER PTHR11735 1 143 6.1E-38 T 23-04-2016 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 Gene3D G3DSA:3.30.420.40 2 137 2.7E-38 T 23-04-2016 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 2 221 8.3E-47 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 Pfam PF00814 Glycoprotease family 30 196 1.3E-28 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NIAKO_RS32835 b2cd32cf3a303fc368a9776f2be25563 229 PANTHER PTHR11735:SF11 1 143 6.1E-38 T 23-04-2016 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 404 2.9E-136 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 Gene3D G3DSA:3.40.605.10 3 229 1.9E-66 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 Gene3D G3DSA:3.40.605.10 373 414 3.1E-14 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 Gene3D G3DSA:3.40.309.10 230 372 3.5E-39 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 SUPERFAMILY SSF53720 5 414 4.32E-102 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 4 414 36.373 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 PANTHER PTHR11063 1 414 4.1E-158 T 23-04-2016 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 Pfam PF00171 Aldehyde dehydrogenase family 10 281 7.4E-12 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 PIRSF PIRSF000151 1 414 7.5E-157 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NIAKO_RS35895 8c28e8477a15c1735e06916819f82a5c 414 PANTHER PTHR11063:SF8 1 414 4.1E-158 T 23-04-2016 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 SUPERFAMILY SSF53756 1 365 8.89E-96 T 23-04-2016 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 364 5.0E-94 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 365 5.2E-85 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 Gene3D G3DSA:3.40.50.2000 1 206 5.4E-66 T 23-04-2016 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 Gene3D G3DSA:3.40.50.2000 207 364 1.6E-44 T 23-04-2016 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 PANTHER PTHR18964 1 367 2.5E-98 T 23-04-2016 NIAKO_RS33325 2faba23ea849f1dd72c464a878c32863 367 PANTHER PTHR18964:SF70 1 367 2.5E-98 T 23-04-2016 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 112 133 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 PANTHER PTHR10884:SF6 26 148 9.2E-36 T 23-04-2016 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 82 140 3.0E-14 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 PANTHER PTHR10884 26 148 9.2E-36 T 23-04-2016 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 SUPERFAMILY SSF143243 23 147 7.32E-39 T 23-04-2016 NIAKO_RS35495 e92183281a05752b93a9b151ff4d9641 156 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 29 148 5.4E-36 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.7E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 PANTHER PTHR30055 10 150 2.2E-16 T 23-04-2016 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 SUPERFAMILY SSF46689 6 68 6.98E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.3E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.3E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS28600 f1d8438eeea3794291b5c5224d557f40 220 Gene3D G3DSA:1.10.357.10 6 185 3.9E-27 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 PANTHER PTHR30173 1 213 2.7E-39 T 23-04-2016 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 180 1.2E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 Pfam PF08281 Sigma-70, region 4 125 174 2.1E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 SUPERFAMILY SSF88659 129 179 7.66E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 Gene3D G3DSA:1.10.10.10 118 180 8.0E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 180 9.0E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 SUPERFAMILY SSF88946 9 100 6.02E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 Pfam PF04542 Sigma-70 region 2 27 92 1.8E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 PANTHER PTHR30173:SF20 1 213 2.7E-39 T 23-04-2016 NIAKO_RS01000 1fd36ed3de9d087ae1e472117e98641e 214 Gene3D G3DSA:1.10.1740.10 7 112 7.5E-21 T 23-04-2016 NIAKO_RS01070 ebb083dc5b5306ac20912207467c1bc5 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 472 5.7E-196 T 23-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 NIAKO_RS01070 ebb083dc5b5306ac20912207467c1bc5 481 PANTHER PTHR30508:SF1 1 481 0.0 T 23-04-2016 NIAKO_RS01070 ebb083dc5b5306ac20912207467c1bc5 481 PANTHER PTHR30508 1 481 0.0 T 23-04-2016 NIAKO_RS01070 ebb083dc5b5306ac20912207467c1bc5 481 SUPERFAMILY SSF101960 36 478 1.96E-141 T 23-04-2016 NIAKO_RS01070 ebb083dc5b5306ac20912207467c1bc5 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 2.4E-68 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 NIAKO_RS12000 e6ed02c49e7fe42e3baed4ec0d02de01 358 Pfam PF08522 Domain of unknown function (DUF1735) 43 172 3.8E-17 T 23-04-2016 IPR013728 Domain of unknown function DUF1735 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Gene3D G3DSA:2.60.120.10 300 404 1.6E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Gene3D G3DSA:1.10.441.10 147 244 1.2E-15 T 23-04-2016 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Gene3D G3DSA:1.10.441.10 287 299 1.2E-15 T 23-04-2016 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Pfam PF01238 Phosphomannose isomerase type I 7 364 9.9E-67 T 23-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Gene3D G3DSA:2.60.120.10 13 146 4.3E-61 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 Gene3D G3DSA:2.60.120.10 251 286 4.3E-61 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 395 7.3E-69 T 23-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 SUPERFAMILY SSF51182 4 403 2.06E-93 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 132 140 - T 23-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PANTHER PTHR10309:SF0 3 406 7.0E-103 T 23-04-2016 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PIRSF PIRSF001480 4 406 7.0E-102 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PANTHER PTHR10309 3 406 7.0E-103 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 38 53 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 87 108 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 132 155 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 249 268 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 287 306 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 10 28 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS02060 af47c420a5187a77ccc01bba32f61873 406 PRINTS PR00714 Phosphomannose isomerase type I signature 268 287 4.7E-52 T 23-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 Gene3D G3DSA:1.10.10.10 121 211 1.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 SUPERFAMILY SSF52172 3 133 1.57E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 SMART SM00448 4 117 1.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 8.4E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 Gene3D G3DSA:3.40.50.2300 1 120 6.8E-31 T 23-04-2016 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 SUPERFAMILY SSF46894 145 210 1.05E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 PANTHER PTHR26402:SF458 4 206 2.6E-59 T 23-04-2016 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 SMART SM00421 149 206 3.5E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 PANTHER PTHR26402 4 206 2.6E-59 T 23-04-2016 NIAKO_RS29995 5c1998c1675d54f35c66bad56bcaa48a 211 Pfam PF00072 Response regulator receiver domain 6 117 1.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 SUPERFAMILY SSF47592 47 126 2.83E-27 T 23-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 Pfam PF02201 SWIB/MDM2 domain 55 126 1.8E-28 T 23-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 PANTHER PTHR13844 30 126 1.1E-24 T 23-04-2016 NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 SMART SM00151 52 127 1.2E-27 T 23-04-2016 IPR019835 SWIB domain NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 PANTHER PTHR13844:SF4 30 126 1.1E-24 T 23-04-2016 NIAKO_RS29115 dbb1ae424321fdef996793b34dbb10a4 127 Gene3D G3DSA:1.10.245.10 45 126 3.0E-31 T 23-04-2016 IPR003121 SWIB/MDM2 domain GO:0005515 NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 SUPERFAMILY SSF52540 14 228 3.32E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Gene3D G3DSA:3.40.50.300 369 425 3.9E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Gene3D G3DSA:3.40.50.300 150 272 3.9E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Pfam PF02689 Helicase 370 424 2.3E-4 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 PANTHER PTHR23274 104 532 4.3E-105 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 PANTHER PTHR23274 13 87 4.3E-105 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Pfam PF14493 Helix-turn-helix domain 647 735 3.2E-23 T 23-04-2016 IPR029491 Helicase Helix-turn-helix domain NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Gene3D G3DSA:3.40.50.300 14 147 4.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 Pfam PF05970 PIF1-like helicase 18 310 7.1E-26 T 23-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 NIAKO_RS30895 e5f3c2b2f37a50bce0b31f5dc607860b 748 SUPERFAMILY SSF52540 150 441 8.23E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05770 06bf1b149eadc46aa5b15f42fe89dc1e 119 Gene3D G3DSA:3.30.70.100 23 92 7.9E-16 T 23-04-2016 NIAKO_RS05770 06bf1b149eadc46aa5b15f42fe89dc1e 119 Pfam PF00403 Heavy-metal-associated domain 31 91 4.9E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS05770 06bf1b149eadc46aa5b15f42fe89dc1e 119 SUPERFAMILY SSF55008 24 95 1.03E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 Gene3D G3DSA:3.40.50.300 163 335 1.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 SUPERFAMILY SSF82051 5 161 1.96E-49 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 328 8.5E-122 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 Pfam PF01018 GTP1/OBG 6 161 5.3E-55 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 Gene3D G3DSA:2.70.210.12 5 159 2.4E-50 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PANTHER PTHR11702 2 336 4.4E-138 T 23-04-2016 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 214 229 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 231 249 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PIRSF PIRSF002401 3 336 2.8E-123 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 Hamap MF_01454 GTPase Obg [obg]. 5 329 42.627 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 ProSitePatterns PS00905 GTP1/OBG family signature. 216 229 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 Pfam PF01926 50S ribosome-binding GTPase 164 283 6.2E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 SUPERFAMILY SSF52540 155 331 1.84E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30505 17b5e0c4a12dcd4ecbe4aeaa72a814b3 336 PANTHER PTHR11702:SF3 2 336 4.4E-138 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 SUPERFAMILY SSF49464 37 107 5.1E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 Pfam PF07715 TonB-dependent Receptor Plug Domain 163 233 1.9E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 Gene3D G3DSA:2.60.40.1120 39 134 6.1E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 Pfam PF14905 Outer membrane protein beta-barrel family 388 819 3.7E-116 T 23-04-2016 NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 SUPERFAMILY SSF56935 135 821 6.72E-61 T 23-04-2016 NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 Gene3D G3DSA:2.170.130.10 135 235 3.5E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10190 5fc87739125b3da7f27dd2fdb0f211f0 843 Gene3D G3DSA:2.40.170.20 236 821 2.7E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 Gene3D G3DSA:3.40.50.720 3 190 3.4E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 Gene3D G3DSA:3.90.25.10 303 361 2.7E-51 T 23-04-2016 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 Gene3D G3DSA:3.90.25.10 193 247 2.7E-51 T 23-04-2016 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 SUPERFAMILY SSF51735 3 350 1.31E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 352 1.8E-181 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 355 55.709 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 PANTHER PTHR10366 4 282 5.8E-209 T 23-04-2016 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 PANTHER PTHR10366 309 357 5.8E-209 T 23-04-2016 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 345 5.1E-157 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 PANTHER PTHR10366:SF32 4 282 5.8E-209 T 23-04-2016 NIAKO_RS33395 452f54f8f31823b860c525b10a4cf8b7 371 PANTHER PTHR10366:SF32 309 357 5.8E-209 T 23-04-2016 NIAKO_RS06060 87483cc91f411d312082309ccb7660ca 523 SUPERFAMILY SSF48452 22 523 1.39E-100 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06060 87483cc91f411d312082309ccb7660ca 523 Pfam PF07980 SusD family 263 523 5.7E-37 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06060 87483cc91f411d312082309ccb7660ca 523 Pfam PF14322 Starch-binding associating with outer membrane 97 223 4.9E-25 T 23-04-2016 NIAKO_RS06060 87483cc91f411d312082309ccb7660ca 523 Gene3D G3DSA:1.25.40.10 365 461 3.8E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06060 87483cc91f411d312082309ccb7660ca 523 Gene3D G3DSA:1.25.40.10 204 316 3.8E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13480 1bbdc7d211fe5e9f745f4ba81d09a4cc 265 Pfam PF05096 Glutamine cyclotransferase 9 264 1.2E-87 T 23-04-2016 IPR007788 Glutamine cyclotransferase NIAKO_RS13480 1bbdc7d211fe5e9f745f4ba81d09a4cc 265 PANTHER PTHR31270 41 264 1.9E-68 T 23-04-2016 NIAKO_RS13480 1bbdc7d211fe5e9f745f4ba81d09a4cc 265 PANTHER PTHR31270:SF0 41 264 1.9E-68 T 23-04-2016 NIAKO_RS13480 1bbdc7d211fe5e9f745f4ba81d09a4cc 265 Gene3D G3DSA:2.130.10.10 77 255 2.9E-9 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS13480 1bbdc7d211fe5e9f745f4ba81d09a4cc 265 SUPERFAMILY SSF50969 70 263 2.98E-15 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 PANTHER PTHR13789:SF174 5 353 1.1E-101 T 23-04-2016 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 SUPERFAMILY SSF51905 5 175 4.09E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 SUPERFAMILY SSF51905 280 367 4.09E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 Pfam PF01494 FAD binding domain 6 68 1.2E-5 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 Pfam PF01494 FAD binding domain 297 353 1.4E-6 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 PANTHER PTHR13789 5 353 1.1E-101 T 23-04-2016 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 9.9E-18 T 23-04-2016 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.9E-18 T 23-04-2016 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.9E-18 T 23-04-2016 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 Gene3D G3DSA:3.50.50.60 281 354 5.6E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19750 c17bfa4b9689cb88f51553bf39cf2b15 385 Gene3D G3DSA:3.50.50.60 4 180 5.6E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32785 f70bb2900bce44616fac0e847d2b1b8f 185 SUPERFAMILY SSF141523 38 184 2.49E-23 T 23-04-2016 NIAKO_RS32785 f70bb2900bce44616fac0e847d2b1b8f 185 Pfam PF03734 L,D-transpeptidase catalytic domain 43 183 8.5E-21 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS32785 f70bb2900bce44616fac0e847d2b1b8f 185 PANTHER PTHR36699 5 183 8.1E-20 T 23-04-2016 NIAKO_RS32785 f70bb2900bce44616fac0e847d2b1b8f 185 Gene3D G3DSA:2.40.440.10 40 184 1.7E-21 T 23-04-2016 NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 114 17.467 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 PANTHER PTHR34039:SF1 1 119 2.6E-26 T 23-04-2016 NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 SUPERFAMILY SSF52980 10 102 8.26E-21 T 23-04-2016 IPR011335 Restriction endonuclease type II-like NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 PANTHER PTHR34039 1 119 2.6E-26 T 23-04-2016 NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 3.8E-23 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 NIAKO_RS02055 3ecf9547a627255fed7a803eecf06dde 119 Gene3D G3DSA:3.40.1350.10 12 105 7.8E-27 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 430 829 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 951 1070 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 885 910 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 327 386 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 271 273 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.40.170.20 227 235 4.3E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.60.40.1120 24 110 3.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Pfam PF13715 CarboxypepD_reg-like domain 24 105 1.5E-14 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF56935 102 247 7.33E-61 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF56935 974 1070 7.33E-61 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF56935 318 401 7.33E-61 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF56935 447 811 7.33E-61 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF56935 885 920 7.33E-61 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1070 1.7E-149 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 SUPERFAMILY SSF49464 22 102 3.79E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532 529 560 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532 597 1068 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532 14 444 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Gene3D G3DSA:2.170.130.10 115 226 8.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532:SF51 529 560 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532:SF51 597 1068 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 PANTHER PTHR11532:SF51 14 444 5.7E-108 T 23-04-2016 NIAKO_RS00845 72d3830df376e69e2ca804e66b1ec558 1070 Pfam PF07715 TonB-dependent Receptor Plug Domain 116 223 6.9E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 Gene3D G3DSA:1.10.10.60 246 293 7.2E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 Gene3D G3DSA:1.10.10.60 210 239 1.1E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 SMART SM00342 208 291 1.4E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 PANTHER PTHR11019 37 297 2.6E-30 T 23-04-2016 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 PANTHER PTHR11019:SF50 37 297 2.6E-30 T 23-04-2016 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 SUPERFAMILY SSF46689 247 294 2.11E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 1.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 1.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS07010 f01623ba47eea91577f402e3821f9583 297 Pfam PF12833 Helix-turn-helix domain 214 292 3.1E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 Gene3D G3DSA:2.160.20.10 34 512 4.4E-46 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SUPERFAMILY SSF51126 451 512 3.7E-50 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SUPERFAMILY SSF51126 35 402 3.7E-50 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 323 345 3.2 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 349 395 5900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 233 255 180.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 296 317 190.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 268 295 5.6 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03110 9ccb8e9ea6ef1eb8a9c8e2f6fba19cb4 514 SMART SM00710 130 155 5000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 243 264 1000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 270 292 25.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 339 367 1500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 215 236 620.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 189 214 24.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SMART SM00710 373 424 4200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 Gene3D G3DSA:2.160.20.10 9 454 2.5E-96 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 PANTHER PTHR31339 22 386 4.2E-73 T 23-04-2016 NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 Pfam PF00295 Glycosyl hydrolases family 28 58 389 1.9E-23 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 PANTHER PTHR31339:SF0 22 386 4.2E-73 T 23-04-2016 NIAKO_RS26510 16fc8f376aba943096e199c40eb0f7dd 455 SUPERFAMILY SSF51126 8 387 2.36E-76 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 1.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 1.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 SUPERFAMILY SSF46689 183 228 4.21E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 SUPERFAMILY SSF46689 231 277 3.45E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 Gene3D G3DSA:1.10.10.60 232 279 8.0E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 SMART SM00342 194 277 2.7E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 Gene3D G3DSA:2.60.120.10 12 87 5.4E-4 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 PANTHER PTHR11019 183 283 1.2E-26 T 23-04-2016 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 Pfam PF12833 Helix-turn-helix domain 200 277 4.1E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08635 7db277ad7c278a600dee38af77d5598b 283 Gene3D G3DSA:1.10.10.60 184 231 1.9E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29970 10dd6189084875d519ae82dd2a1a1a33 480 Pfam PF17127 Domain of unknown function (DUF5106) 207 309 2.4E-11 T 23-04-2016 IPR033395 Domain of unknown function DUF5106 NIAKO_RS29970 10dd6189084875d519ae82dd2a1a1a33 480 Gene3D G3DSA:3.40.30.10 325 471 1.7E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS29970 10dd6189084875d519ae82dd2a1a1a33 480 Pfam PF14289 Domain of unknown function (DUF4369) 17 120 1.5E-8 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS29970 10dd6189084875d519ae82dd2a1a1a33 480 SUPERFAMILY SSF52833 329 470 3.71E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS29970 10dd6189084875d519ae82dd2a1a1a33 480 Pfam PF13905 Thioredoxin-like 355 456 3.5E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 PANTHER PTHR24960 64 110 5.9E-17 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 PANTHER PTHR24960 1 44 5.9E-17 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 Pfam PF12838 4Fe-4S dicluster domain 9 91 1.4E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 Gene3D G3DSA:3.30.70.20 5 28 4.9E-16 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 Gene3D G3DSA:3.30.70.20 63 106 4.9E-16 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 PANTHER PTHR24960:SF38 64 110 5.9E-17 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 PANTHER PTHR24960:SF38 1 44 5.9E-17 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 SUPERFAMILY SSF54862 64 108 1.29E-16 T 23-04-2016 NIAKO_RS01565 639dcffccf9cc6b7482b205c2e7820b1 115 SUPERFAMILY SSF54862 6 29 1.29E-16 T 23-04-2016 NIAKO_RS24260 1a3976aae47e42ae91a5698363a91c59 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 97 8.4E-14 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS24260 1a3976aae47e42ae91a5698363a91c59 99 Gene3D G3DSA:3.30.160.100 1 97 3.5E-18 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS24260 1a3976aae47e42ae91a5698363a91c59 99 SUPERFAMILY SSF69754 1 94 9.68E-19 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00096 Glutamine amidotransferase superfamily signature 252 263 1.1E-11 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00096 Glutamine amidotransferase superfamily signature 224 233 1.1E-11 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00096 Glutamine amidotransferase superfamily signature 339 352 1.1E-11 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PANTHER PTHR11405 7 369 4.5E-183 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 SMART SM01097 7 137 2.1E-69 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 SUPERFAMILY SSF52021 8 154 9.02E-49 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 Pfam PF00117 Glutamine amidotransferase class-I 184 362 1.5E-42 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 Gene3D G3DSA:3.50.30.20 7 153 4.6E-52 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 SUPERFAMILY SSF52317 155 368 7.05E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 368 44.467 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 Gene3D G3DSA:3.40.50.880 156 366 9.3E-68 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00097 Anthranilate synthase component II signature 339 352 8.9E-7 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00097 Anthranilate synthase component II signature 252 263 8.9E-7 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00097 Anthranilate synthase component II signature 224 233 8.9E-7 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 9 136 4.0E-47 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 365 2.6E-142 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 182 196 4.6E-31 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 221 235 4.6E-31 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 294 305 4.6E-31 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 252 268 4.6E-31 T 23-04-2016 NIAKO_RS21840 1af249470c96a18633e6afb9c247f30f 369 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 269 286 4.6E-31 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 74 130 1.1E-19 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 Pfam PF00361 Proton-conducting membrane transporter 143 451 4.9E-84 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 286 308 6.1E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 94 114 6.1E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 443 465 6.1E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 386 408 6.1E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PANTHER PTHR22773 1 590 3.8E-217 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 267 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 444 463 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 92 117 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 336 348 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 268 294 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 120 140 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 167 188 1.5E-57 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 PANTHER PTHR22773:SF50 1 590 3.8E-217 T 23-04-2016 NIAKO_RS35525 62a0cc2d985c72548c4db26b6b628c41 641 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 636 2.0E-171 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 199 510 3.1E-138 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Pfam PF00117 Glutamine amidotransferase class-I 7 187 3.3E-35 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Pfam PF00958 GMP synthase C terminal domain 420 509 5.0E-43 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 SUPERFAMILY SSF52317 4 196 1.83E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Gene3D G3DSA:3.40.50.880 2 209 1.0E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Gene3D G3DSA:3.40.50.620 210 383 2.0E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 192 1.7E-66 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 SUPERFAMILY SSF54810 390 510 5.62E-50 T 23-04-2016 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Gene3D G3DSA:3.30.300.10 386 510 9.6E-52 T 23-04-2016 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 PANTHER PTHR11922:SF2 1 507 6.1E-261 T 23-04-2016 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 SUPERFAMILY SSF52402 180 431 7.5E-53 T 23-04-2016 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 510 51.291 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 Pfam PF02540 NAD synthase 202 279 4.8E-7 T 23-04-2016 IPR022310 NAD/GMP synthase NIAKO_RS24880 2fa3e0fa3181e4d2af14fc86d44d28d2 510 PANTHER PTHR11922 1 507 6.1E-261 T 23-04-2016 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 PANTHER PTHR19370 7 222 1.9E-32 T 23-04-2016 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 Pfam PF00970 Oxidoreductase FAD-binding domain 7 93 5.1E-6 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 SUPERFAMILY SSF52343 102 221 2.1E-25 T 23-04-2016 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 SUPERFAMILY SSF63380 5 98 6.81E-17 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 3.4E-7 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 PRINTS PR00409 Phthalate dioxygenase reductase family signature 106 125 3.4E-7 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 Gene3D G3DSA:3.40.50.80 105 222 1.2E-25 T 23-04-2016 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 Gene3D G3DSA:2.40.30.10 5 93 1.1E-17 T 23-04-2016 NIAKO_RS25610 93563533a3dca505ab98d69c237a56be 222 Pfam PF00175 Oxidoreductase NAD-binding domain 107 204 9.9E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS25570 8eb405dd5d920b598e1c75fea04f3e5a 251 Pfam PF13460 NAD(P)H-binding 7 173 7.0E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25570 8eb405dd5d920b598e1c75fea04f3e5a 251 PANTHER PTHR14194 1 244 2.4E-92 T 23-04-2016 NIAKO_RS25570 8eb405dd5d920b598e1c75fea04f3e5a 251 SUPERFAMILY SSF51735 1 213 1.63E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25570 8eb405dd5d920b598e1c75fea04f3e5a 251 PANTHER PTHR14194:SF69 1 244 2.4E-92 T 23-04-2016 NIAKO_RS25570 8eb405dd5d920b598e1c75fea04f3e5a 251 Gene3D G3DSA:3.40.50.720 1 207 3.4E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 SUPERFAMILY SSF102522 1 105 1.57E-23 T 23-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 PIRSF PIRSF006779 1 254 5.4E-40 T 23-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 Gene3D G3DSA:2.40.30.90 163 248 2.3E-25 T 23-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 SUPERFAMILY SSF101852 160 248 3.4E-19 T 23-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 PANTHER PTHR35092 1 262 5.3E-36 T 23-04-2016 NIAKO_RS14295 42e87a2c1a0c5bd2ef86c4ceb616d3f2 271 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 4 248 2.3E-55 T 23-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 Pfam PF04542 Sigma-70 region 2 29 94 4.5E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 Pfam PF08281 Sigma-70, region 4 129 178 9.5E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 PANTHER PTHR30173 20 186 3.2E-37 T 23-04-2016 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 182 8.0E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 SUPERFAMILY SSF88946 19 105 1.96E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 Gene3D G3DSA:1.10.10.10 121 185 2.4E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 SUPERFAMILY SSF88659 106 184 1.4E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 23 182 1.2E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS12230 2d89e10043f5d41dc68996a8066478eb 190 Gene3D G3DSA:1.10.1740.10 19 115 4.8E-18 T 23-04-2016 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 Gene3D G3DSA:1.10.10.10 152 223 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 SMART SM00419 170 218 5.1E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 Pfam PF13545 Crp-like helix-turn-helix domain 153 224 4.2E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 SUPERFAMILY SSF51206 8 148 2.23E-28 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 SMART SM00100 15 133 8.1E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 PANTHER PTHR24567 20 228 2.0E-42 T 23-04-2016 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 SUPERFAMILY SSF46785 151 226 2.35E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 118 1.4E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS26165 924b4f83eeca7e8e05a5a18021d9f8a6 228 Gene3D G3DSA:2.60.120.10 11 147 1.3E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS19945 53f44c989043e9af021f9b8ec8525841 285 SUPERFAMILY SSF52833 142 282 2.76E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS19945 53f44c989043e9af021f9b8ec8525841 285 Gene3D G3DSA:3.40.30.10 144 281 4.1E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS19945 53f44c989043e9af021f9b8ec8525841 285 Pfam PF00578 AhpC/TSA family 146 267 8.0E-28 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS19945 53f44c989043e9af021f9b8ec8525841 285 PANTHER PTHR13871 160 271 7.6E-26 T 23-04-2016 NIAKO_RS19945 53f44c989043e9af021f9b8ec8525841 285 ProSitePatterns PS00194 Thioredoxin family active site. 174 192 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 Gene3D G3DSA:1.10.10.10 2 137 1.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 Pfam PF02082 Transcriptional regulator 2 83 6.4E-18 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 PANTHER PTHR33221 1 142 2.2E-26 T 23-04-2016 NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 SUPERFAMILY SSF46785 1 134 1.43E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 1.8E-26 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS20490 95fa6294dc1ad933a83b329ee8338abd 143 PANTHER PTHR33221:SF2 1 142 2.2E-26 T 23-04-2016 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 Gene3D G3DSA:2.30.42.10 115 198 2.3E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 SUPERFAMILY SSF50156 123 199 3.81E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 PANTHER PTHR22939 121 200 5.1E-17 T 23-04-2016 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 SMART SM00228 234 306 1.0E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 SMART SM00228 111 182 1.2E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 PANTHER PTHR22939:SF79 121 200 5.1E-17 T 23-04-2016 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 SUPERFAMILY SSF50156 234 314 2.5E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 Pfam PF13180 PDZ domain 234 314 6.9E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 Pfam PF13180 PDZ domain 111 191 7.2E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS28230 b9376751adf4e2235850c21781297b56 324 Gene3D G3DSA:2.30.42.10 234 314 1.4E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS10965 decf37f6a051956c7ab06e8ef7f8488d 209 Pfam PF05974 Domain of unknown function (DUF892) 38 194 1.1E-53 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS10965 decf37f6a051956c7ab06e8ef7f8488d 209 SUPERFAMILY SSF47240 37 187 5.14E-45 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS10965 decf37f6a051956c7ab06e8ef7f8488d 209 PANTHER PTHR30565:SF2 38 205 1.4E-46 T 23-04-2016 NIAKO_RS10965 decf37f6a051956c7ab06e8ef7f8488d 209 PANTHER PTHR30565 38 205 1.4E-46 T 23-04-2016 NIAKO_RS10965 decf37f6a051956c7ab06e8ef7f8488d 209 Gene3D G3DSA:1.20.1260.10 38 196 3.3E-58 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PIRSF PIRSF001365 5 294 1.3E-81 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PANTHER PTHR12128 9 293 2.7E-102 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PANTHER PTHR12128:SF34 9 293 2.7E-102 T 23-04-2016 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 Pfam PF00701 Dihydrodipicolinate synthetase family 10 293 6.0E-79 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 SMART SM01130 6 294 2.3E-105 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 293 2.8E-91 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 SUPERFAMILY SSF51569 4 293 4.5E-89 T 23-04-2016 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 Gene3D G3DSA:3.20.20.70 6 293 4.0E-99 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.5E-27 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.5E-27 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.5E-27 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.5E-27 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS24130 8944d527c78e1b0ea34f9b854c569341 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 293 53.474 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 Gene3D G3DSA:3.40.50.620 29 147 8.1E-32 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 Pfam PF01467 Cytidylyltransferase-like 34 131 1.9E-14 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 21 161 5.9E-58 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 PANTHER PTHR10739:SF26 14 160 1.3E-34 T 23-04-2016 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 SUPERFAMILY SSF52374 30 160 1.72E-22 T 23-04-2016 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 PANTHER PTHR10739 14 160 1.3E-34 T 23-04-2016 NIAKO_RS07480 d0be9191f2abfa71341e830b23d467ae 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 95 9.5E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS00960 5dbcfa00d7a461ece58840ddf51b2f5f 74 Pfam PF12732 YtxH-like protein 8 72 8.3E-20 T 23-04-2016 IPR024623 Uncharacterised protein family YtxH NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 PANTHER PTHR11002 46 234 6.7E-41 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 Pfam PF00484 Carbonic anhydrase 93 234 7.2E-37 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 PANTHER PTHR11002:SF17 46 234 6.7E-41 T 23-04-2016 NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 Gene3D G3DSA:3.40.1050.10 43 236 6.6E-46 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 SUPERFAMILY SSF53056 43 240 7.98E-47 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS00220 50a989c698d5f2aa335e3c474703b654 241 SMART SM00947 85 238 1.9E-46 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS17735 a2c98a7d7cb4e95a10cce689462d23e1 514 Gene3D G3DSA:2.60.420.10 433 500 1.4E-7 T 23-04-2016 NIAKO_RS17735 a2c98a7d7cb4e95a10cce689462d23e1 514 Pfam PF01204 Trehalase 231 351 1.2E-5 T 23-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 NIAKO_RS17735 a2c98a7d7cb4e95a10cce689462d23e1 514 SUPERFAMILY SSF48208 75 449 2.86E-40 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS12235 475212c3dc711f3f84a114a80d6e45ca 342 PANTHER PTHR30273:SF2 1 342 1.0E-62 T 23-04-2016 NIAKO_RS12235 475212c3dc711f3f84a114a80d6e45ca 342 PIRSF PIRSF018266 2 342 9.4E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS12235 475212c3dc711f3f84a114a80d6e45ca 342 Pfam PF04773 FecR protein 119 212 3.7E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS12235 475212c3dc711f3f84a114a80d6e45ca 342 Pfam PF16344 Domain of unknown function (DUF4974) 249 340 2.2E-19 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS12235 475212c3dc711f3f84a114a80d6e45ca 342 PANTHER PTHR30273 1 342 1.0E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 SUPERFAMILY SSF53335 3 246 9.81E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 SMART SM00650 18 186 2.0E-51 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 PANTHER PTHR11727 5 245 1.7E-74 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 238 2.8E-53 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 246 6.4E-76 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 Gene3D G3DSA:1.10.8.100 190 246 1.8E-17 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 250 46.59 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 Gene3D G3DSA:3.40.50.150 4 186 1.3E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS34105 423e09d465b5a71fd2e622f8477b2b4d 250 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 62 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 PANTHER PTHR11228 34 402 1.2E-42 T 23-04-2016 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 323 403 1.6E-11 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 SUPERFAMILY SSF102114 90 395 7.59E-34 T 23-04-2016 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 Pfam PF13353 4Fe-4S single cluster domain 99 216 3.3E-8 T 23-04-2016 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 Gene3D G3DSA:3.20.20.70 87 401 8.7E-36 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 PANTHER PTHR11228:SF5 34 402 1.2E-42 T 23-04-2016 NIAKO_RS04165 2fa3f10260b46897068dedee2d3faa51 434 Pfam PF04055 Radical SAM superfamily 94 244 3.7E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 ProSitePatterns PS00938 Initiation factor 3 signature. 76 89 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 102 186 4.5E-31 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 PANTHER PTHR10938 18 195 5.5E-60 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 Gene3D G3DSA:3.30.110.10 97 189 1.4E-31 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 20 188 26.242 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 SUPERFAMILY SSF54364 24 95 9.29E-26 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 SUPERFAMILY SSF55200 102 188 6.67E-27 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 27 93 3.4E-30 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 27 187 1.8E-55 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NIAKO_RS10765 98de15472d14368c2f230594aab9390b 195 Gene3D G3DSA:3.10.20.80 21 96 1.0E-33 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NIAKO_RS05945 5927930e8aeb3758e9e30fb82dbd44c5 418 PANTHER PTHR32347 1 417 2.2E-51 T 23-04-2016 NIAKO_RS05945 5927930e8aeb3758e9e30fb82dbd44c5 418 PANTHER PTHR32347:SF14 1 417 2.2E-51 T 23-04-2016 NIAKO_RS05945 5927930e8aeb3758e9e30fb82dbd44c5 418 Gene3D G3DSA:2.40.50.100 231 262 1.1E-5 T 23-04-2016 NIAKO_RS05945 5927930e8aeb3758e9e30fb82dbd44c5 418 Gene3D G3DSA:2.40.50.100 77 106 1.1E-5 T 23-04-2016 NIAKO_RS05945 5927930e8aeb3758e9e30fb82dbd44c5 418 Pfam PF13437 HlyD family secretion protein 233 316 5.1E-7 T 23-04-2016 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 SUPERFAMILY SSF51556 81 384 1.13E-74 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 Pfam PF01979 Amidohydrolase family 77 421 9.2E-37 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 PANTHER PTHR11271:SF42 40 424 4.9E-75 T 23-04-2016 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 Gene3D G3DSA:2.30.40.10 367 395 5.4E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 PANTHER PTHR11271 40 424 4.9E-75 T 23-04-2016 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 Gene3D G3DSA:2.30.40.10 26 82 5.0E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 Gene3D G3DSA:2.30.40.10 396 422 5.0E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 Gene3D G3DSA:3.20.20.140 83 366 1.7E-76 T 23-04-2016 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 SUPERFAMILY SSF51338 30 80 1.64E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS05005 a1993da99e6f59e106adfca6d4ea913a 424 SUPERFAMILY SSF51338 384 421 1.64E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 296 350 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PANTHER PTHR10422 20 604 1.1E-220 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 44 523 2.4E-143 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 364 385 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 477 498 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 427 446 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 34 59 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 315 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 340 355 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PRINTS PR01165 Cytochrome c oxidase subunit I signature 399 417 7.2E-72 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 PANTHER PTHR10422:SF6 20 604 1.1E-220 T 23-04-2016 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 Gene3D G3DSA:1.20.210.10 23 588 1.6E-188 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS33785 3e6f6ac2bdce918bf2d1a44b21dfc451 608 SUPERFAMILY SSF81442 31 575 2.75E-160 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 Gene3D G3DSA:3.40.250.10 271 380 1.4E-25 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 Pfam PF00899 ThiF family 15 252 1.3E-62 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 PANTHER PTHR10953:SF153 1 385 2.9E-149 T 23-04-2016 NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 SUPERFAMILY SSF69572 6 351 4.84E-101 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 Gene3D G3DSA:3.40.50.720 8 255 2.3E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 Pfam PF00581 Rhodanese-like domain 285 376 1.4E-8 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 PANTHER PTHR10953 1 385 2.9E-149 T 23-04-2016 NIAKO_RS00470 846e9f58bb5bd3ff80bd9e320f18fa76 385 SMART SM00450 285 380 9.4E-16 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS26840 5859aae54335885860c1dcaa1699f3cb 366 PANTHER PTHR33529 1 366 2.3E-63 T 23-04-2016 NIAKO_RS26840 5859aae54335885860c1dcaa1699f3cb 366 PANTHER PTHR33529:SF1 1 366 2.3E-63 T 23-04-2016 NIAKO_RS26840 5859aae54335885860c1dcaa1699f3cb 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 361 1.7E-59 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 PANTHER PTHR30536:SF5 1 169 1.4E-145 T 23-04-2016 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 PANTHER PTHR30536:SF5 198 551 1.4E-145 T 23-04-2016 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 PANTHER PTHR30536 1 169 1.4E-145 T 23-04-2016 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 PANTHER PTHR30536 198 551 1.4E-145 T 23-04-2016 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 110 549 5.0E-154 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 SMART SM00858 12 83 1.6E-10 T 23-04-2016 IPR013974 SAF domain NIAKO_RS26025 c3c103e57398790749909fe3d6962250 551 Pfam PF08666 SAF domain 12 82 5.5E-9 T 23-04-2016 IPR013974 SAF domain NIAKO_RS22520 7305acd4fb283bb04091335f2538df09 265 SUPERFAMILY SSF53335 89 241 3.16E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22520 7305acd4fb283bb04091335f2538df09 265 Gene3D G3DSA:3.40.50.150 94 241 1.5E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22520 7305acd4fb283bb04091335f2538df09 265 Pfam PF13578 Methyltransferase domain 114 218 2.5E-14 T 23-04-2016 NIAKO_RS22520 7305acd4fb283bb04091335f2538df09 265 PANTHER PTHR10509 98 218 8.7E-12 T 23-04-2016 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PANTHER PTHR11958:SF49 3 414 4.0E-191 T 23-04-2016 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 141 163 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 3.6E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 Pfam PF00375 Sodium:dicarboxylate symporter family 7 396 3.3E-109 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 SUPERFAMILY SSF118215 7 398 3.27E-110 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 Gene3D G3DSA:1.10.3860.10 7 400 3.5E-109 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 PANTHER PTHR11958 3 414 4.0E-191 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS35110 f087791b17ceb318f03d26317f897f40 427 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 291 314 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 NIAKO_RS13425 0bbf4e7d7f783d8871812e1e74a009f9 228 Pfam PF00561 alpha/beta hydrolase fold 3 104 3.6E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS13425 0bbf4e7d7f783d8871812e1e74a009f9 228 SUPERFAMILY SSF53474 4 227 1.01E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS13425 0bbf4e7d7f783d8871812e1e74a009f9 228 Gene3D G3DSA:3.40.50.1820 4 228 7.5E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS13425 0bbf4e7d7f783d8871812e1e74a009f9 228 PANTHER PTHR10992 159 224 1.3E-27 T 23-04-2016 NIAKO_RS13425 0bbf4e7d7f783d8871812e1e74a009f9 228 PANTHER PTHR10992 2 142 1.3E-27 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.40.170.20 252 270 1.2E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.40.170.20 878 903 1.2E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.40.170.20 939 1041 1.2E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.40.170.20 331 808 1.2E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Pfam PF13715 CarboxypepD_reg-like domain 39 120 1.2E-15 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 250 1.4E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Pfam PF00593 TonB dependent receptor 628 1040 4.5E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532 584 1039 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532 457 553 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532 318 376 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532 217 302 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532 15 201 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.60.40.1120 39 122 1.0E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF56935 948 1041 2.88E-99 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF56935 118 274 2.88E-99 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF56935 447 794 2.88E-99 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF56935 322 410 2.88E-99 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF56935 870 913 2.88E-99 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532:SF57 584 1039 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532:SF57 457 553 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532:SF57 318 376 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532:SF57 217 302 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 PANTHER PTHR11532:SF57 15 201 5.9E-236 T 23-04-2016 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 SUPERFAMILY SSF49464 35 118 6.02E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 Gene3D G3DSA:2.170.130.10 123 251 4.2E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 38 1041 1.1E-252 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06765 1ea68b269eeafe70a4d2d4718cc7aafe 1041 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 226 256 5.6E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 PANTHER PTHR10992:SF859 8 273 1.7E-116 T 23-04-2016 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 Pfam PF00561 alpha/beta hydrolase fold 22 250 5.0E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 PANTHER PTHR10992 8 273 1.7E-116 T 23-04-2016 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.3E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.3E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 1.3E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 SUPERFAMILY SSF53474 1 272 4.98E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS20965 3e659bef83b2b885759442251fd63661 274 Gene3D G3DSA:3.40.50.1820 6 272 1.3E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 SUPERFAMILY SSF53901 4 356 9.89E-50 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 PANTHER PTHR34069:SF2 1 356 2.4E-66 T 23-04-2016 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 PANTHER PTHR34069 1 356 2.4E-66 T 23-04-2016 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 130 208 1.4E-18 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 Gene3D G3DSA:3.40.47.10 186 356 1.7E-31 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 257 355 1.7E-12 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NIAKO_RS07125 26cae1bdd365a5febf3aee0ea00ddbc3 357 Gene3D G3DSA:3.40.47.10 2 185 3.9E-44 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 SUPERFAMILY SSF46689 210 255 7.17E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 Gene3D G3DSA:1.10.10.60 210 254 1.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 SMART SM00342 173 256 2.1E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 PANTHER PTHR11019:SF126 169 258 1.3E-16 T 23-04-2016 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 Pfam PF12833 Helix-turn-helix domain 179 255 5.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 PANTHER PTHR11019 169 258 1.3E-16 T 23-04-2016 NIAKO_RS15510 80a9bb2e6c2b44693d78d475b46358dc 259 Gene3D G3DSA:1.10.10.60 169 205 1.8E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 SUPERFAMILY SSF63829 51 228 1.8E-8 T 23-04-2016 NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Pfam PF07494 Two component regulator propeller 47 70 8.6E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Pfam PF07494 Two component regulator propeller 499 517 0.0075 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Pfam PF07495 Y_Y_Y domain 658 704 1.4E-10 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 SUPERFAMILY SSF50998 307 583 9.42E-13 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 SUPERFAMILY SSF55874 833 946 1.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Gene3D G3DSA:2.140.10.10 347 482 4.7E-6 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Gene3D G3DSA:3.30.565.10 823 976 8.2E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 PANTHER PTHR34220 735 977 6.7E-40 T 23-04-2016 NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Pfam PF06580 Histidine kinase 774 845 5.5E-20 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Gene3D G3DSA:2.120.10.30 28 114 4.0E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Gene3D G3DSA:2.120.10.30 276 318 4.0E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14815 857b6daa61503dfdedff120912f08fd1 977 Gene3D G3DSA:2.120.10.30 153 200 4.0E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 SUPERFAMILY SSF158446 2 114 9.94E-33 T 23-04-2016 NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 Pfam PF05635 23S rRNA-intervening sequence protein 5 109 1.4E-32 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 Gene3D G3DSA:1.20.1440.60 1 114 1.4E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 PANTHER PTHR38471:SF2 1 118 2.8E-27 T 23-04-2016 NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 9 114 1.2E-32 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS27700 fd03e822677864eb21e22d112260d419 119 PANTHER PTHR38471 1 118 2.8E-27 T 23-04-2016 NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 SUPERFAMILY SSF53300 87 228 4.75E-35 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 SUPERFAMILY SSF53300 255 286 4.75E-35 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 Pfam PF13519 von Willebrand factor type A domain 93 201 4.1E-21 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 SMART SM00327 90 292 2.9E-23 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 PANTHER PTHR22550 8 329 2.5E-59 T 23-04-2016 NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 Gene3D G3DSA:3.40.50.410 87 287 2.3E-25 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS32920 5b922139dacee7a3b1d562f4eb334543 333 PANTHER PTHR22550:SF8 8 329 2.5E-59 T 23-04-2016 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 81 6.9E-16 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 Gene3D G3DSA:3.30.930.10 21 341 1.7E-120 T 23-04-2016 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 Pfam PF01409 tRNA synthetases class II core domain (F) 92 340 4.6E-102 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 PANTHER PTHR11538 92 340 9.8E-107 T 23-04-2016 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 SUPERFAMILY SSF46589 20 98 3.87E-13 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 SUPERFAMILY SSF55681 92 340 1.64E-81 T 23-04-2016 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 340 44.873 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 NIAKO_RS32650 b1bce4cee9e46777ccecacb31ff8652a 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 341 2.0E-94 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 PANTHER PTHR14237:SF30 3 268 1.1E-80 T 23-04-2016 NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 SUPERFAMILY SSF50800 152 265 7.32E-15 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 SUPERFAMILY SSF50800 3 50 7.32E-15 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 Pfam PF03476 MOSC N-terminal beta barrel domain 1 117 7.9E-24 T 23-04-2016 IPR005303 MOSC, N-terminal beta barrel NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 Pfam PF03473 MOSC domain 145 263 2.0E-27 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 SUPERFAMILY SSF141673 4 134 9.29E-31 T 23-04-2016 NIAKO_RS01010 a6c31c2833e91039d3c7cc61fc60639f 275 PANTHER PTHR14237 3 268 1.1E-80 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 165 180 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 PANTHER PTHR11780 17 435 2.8E-204 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 SUPERFAMILY SSF140490 336 428 1.57E-34 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 SUPERFAMILY SSF142019 6 238 1.57E-86 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 11 426 3.1E-175 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 353 364 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 343 425 2.2E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 PANTHER PTHR11780:SF10 17 435 2.8E-204 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 SMART SM00928 340 385 1.7E-20 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 SUPERFAMILY SSF142984 239 335 2.09E-13 T 23-04-2016 NIAKO_RS34785 480a477a6caca8d3234cc430d1783eec 454 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 216 1.4E-48 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 SUPERFAMILY SSF55347 132 284 6.76E-15 T 23-04-2016 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 PANTHER PTHR22604:SF124 6 364 2.4E-60 T 23-04-2016 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 Gene3D G3DSA:3.30.360.10 319 365 2.4E-15 T 23-04-2016 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 Gene3D G3DSA:3.30.360.10 147 273 2.4E-15 T 23-04-2016 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 SUPERFAMILY SSF51735 6 158 2.99E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 126 1.6E-22 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 PANTHER PTHR22604 6 364 2.4E-60 T 23-04-2016 NIAKO_RS23830 d5f5de9c87177de0f7db4462836b0959 366 Gene3D G3DSA:3.40.50.720 6 146 6.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05860 340b7228d0c3d6e1240755b8a9b245a3 161 Pfam PF04390 Lipopolysaccharide-assembly 2 157 1.1E-12 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 SMART SM00862 151 226 1.2E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 Pfam PF00072 Response regulator receiver domain 6 115 2.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 3.3E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 Gene3D G3DSA:3.40.50.2300 2 123 5.7E-37 T 23-04-2016 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 PANTHER PTHR26402:SF578 4 231 9.9E-83 T 23-04-2016 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 SMART SM00448 4 115 4.9E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 PANTHER PTHR26402 4 231 9.9E-83 T 23-04-2016 NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 SUPERFAMILY SSF52172 1 172 2.26E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS35600 d12b062ada3d4919c0a65b726fae71b2 231 Gene3D G3DSA:1.10.10.10 131 228 7.8E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02950 98fc6605aab05735ef6513dcb92475ee 177 Gene3D G3DSA:3.10.450.50 22 158 1.2E-6 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS02950 98fc6605aab05735ef6513dcb92475ee 177 SUPERFAMILY SSF54427 24 159 1.91E-11 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS02950 98fc6605aab05735ef6513dcb92475ee 177 Pfam PF12893 Putative lumazine-binding 26 158 3.9E-6 T 23-04-2016 NIAKO_RS28175 d3fe1f241566e6f08d5cbf598fc7f23b 233 Gene3D G3DSA:3.40.50.10090 164 225 2.7E-5 T 23-04-2016 NIAKO_RS28175 d3fe1f241566e6f08d5cbf598fc7f23b 233 Gene3D G3DSA:3.40.50.10090 45 159 2.0E-22 T 23-04-2016 NIAKO_RS28175 d3fe1f241566e6f08d5cbf598fc7f23b 233 PANTHER PTHR12390 46 232 9.0E-20 T 23-04-2016 NIAKO_RS28175 d3fe1f241566e6f08d5cbf598fc7f23b 233 SUPERFAMILY SSF69618 6 228 3.92E-34 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28175 d3fe1f241566e6f08d5cbf598fc7f23b 233 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 224 2.7E-30 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 PANTHER PTHR10578:SF76 17 386 4.6E-87 T 23-04-2016 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 284 290 - T 23-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 PIRSF PIRSF000138 2 387 2.5E-97 T 23-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 Pfam PF01070 FMN-dependent dehydrogenase 24 386 6.9E-105 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 PANTHER PTHR10578 17 386 4.6E-87 T 23-04-2016 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 SUPERFAMILY SSF51395 14 384 4.4E-76 T 23-04-2016 NIAKO_RS08265 b49b1696157ecba0617204026b98843e 387 Gene3D G3DSA:3.20.20.70 16 386 8.3E-100 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 PANTHER PTHR11851 1 402 8.7E-114 T 23-04-2016 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 Pfam PF00675 Insulinase (Peptidase family M16) 14 129 4.4E-20 T 23-04-2016 IPR011765 Peptidase M16, N-terminal NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 PANTHER PTHR11851:SF136 1 402 8.7E-114 T 23-04-2016 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 Pfam PF05193 Peptidase M16 inactive domain 168 344 2.3E-32 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 Gene3D G3DSA:3.30.830.10 5 224 6.3E-55 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 SUPERFAMILY SSF63411 3 212 6.05E-55 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 Gene3D G3DSA:3.30.830.10 253 405 9.3E-22 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS31730 54713b5483efee5178906947a333ef0b 412 SUPERFAMILY SSF63411 224 406 4.78E-27 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 7.7E-37 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 179 17.552 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 SUPERFAMILY SSF47928 5 106 1.12E-18 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PRINTS PR00125 ATP synthase delta subunit signature 86 100 4.0E-19 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PRINTS PR00125 ATP synthase delta subunit signature 75 86 4.0E-19 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PRINTS PR00125 ATP synthase delta subunit signature 152 170 4.0E-19 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PRINTS PR00125 ATP synthase delta subunit signature 6 25 4.0E-19 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PRINTS PR00125 ATP synthase delta subunit signature 137 152 4.0E-19 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 PANTHER PTHR11910 6 183 9.8E-35 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 Gene3D G3DSA:1.10.520.20 6 106 1.0E-18 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 139 158 - T 23-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 NIAKO_RS34000 2c1bb7068c009204c2d3bc1ccda62d15 187 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.1E-42 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NIAKO_RS05835 2629d294ee3866c852181f576941b319 203 PANTHER PTHR10681:SF91 39 200 9.1E-28 T 23-04-2016 NIAKO_RS05835 2629d294ee3866c852181f576941b319 203 SUPERFAMILY SSF52833 33 201 1.33E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05835 2629d294ee3866c852181f576941b319 203 Gene3D G3DSA:3.40.30.10 36 193 1.8E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05835 2629d294ee3866c852181f576941b319 203 Pfam PF08534 Redoxin 29 167 8.1E-11 T 23-04-2016 IPR013740 Redoxin GO:0016491 NIAKO_RS05835 2629d294ee3866c852181f576941b319 203 PANTHER PTHR10681 39 200 9.1E-28 T 23-04-2016 NIAKO_RS01885 dc012dcce0192679d76d5dadac9894b4 687 Pfam PF14121 Putative porin 89 685 9.3E-87 T 23-04-2016 IPR025631 Putative porin-10 NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 Pfam PF00106 short chain dehydrogenase 13 219 3.4E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PANTHER PTHR24320:SF45 2 294 3.2E-102 T 23-04-2016 NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 Gene3D G3DSA:3.40.50.720 10 256 2.0E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 SUPERFAMILY SSF51735 10 251 1.04E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02895 4ab775bfca19284542275ba98deb681a 296 PANTHER PTHR24320 2 294 3.2E-102 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.170.130.10 111 229 1.3E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF56935 430 779 2.2E-100 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF56935 105 253 2.2E-100 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF56935 919 1009 2.2E-100 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF56935 845 889 2.2E-100 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF56935 300 388 2.2E-100 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Pfam PF00593 TonB dependent receptor 605 1007 1.1E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.60.40.1120 27 110 7.1E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Pfam PF13715 CarboxypepD_reg-like domain 27 107 4.1E-13 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532:SF57 561 1007 5.6E-225 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532:SF57 470 528 5.6E-225 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532:SF57 6 354 5.6E-225 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1009 3.2E-238 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 SUPERFAMILY SSF49464 25 105 4.32E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.40.170.20 309 387 1.5E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.40.170.20 854 1009 1.5E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.40.170.20 425 788 1.5E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Gene3D G3DSA:2.40.170.20 230 253 1.5E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 2.2E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 229 2.1E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532 561 1007 5.6E-225 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532 470 528 5.6E-225 T 23-04-2016 NIAKO_RS13095 5af7ae2c4d0f1ddfb686a5c32768aa12 1009 PANTHER PTHR11532 6 354 5.6E-225 T 23-04-2016 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 PANTHER PTHR11019 27 260 2.5E-26 T 23-04-2016 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 Pfam PF02311 AraC-like ligand binding domain 28 80 8.9E-7 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 Gene3D G3DSA:2.60.120.10 21 82 2.8E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 Gene3D G3DSA:1.10.10.60 213 261 7.7E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 SUPERFAMILY SSF46689 159 210 3.31E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 Pfam PF12833 Helix-turn-helix domain 183 260 1.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 SUPERFAMILY SSF51182 16 78 3.0E-9 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 Gene3D G3DSA:1.10.10.60 155 212 2.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 SMART SM00342 176 259 4.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07175 a2bf2fe41015e95baf96df47b6b7fd71 261 SUPERFAMILY SSF46689 212 261 1.08E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 SUPERFAMILY SSF63737 49 244 1.57E-18 T 23-04-2016 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 PANTHER PTHR11533 49 500 2.5E-34 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 Gene3D G3DSA:1.10.390.10 359 494 3.2E-10 T 23-04-2016 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 SUPERFAMILY SSF55486 260 492 7.91E-33 T 23-04-2016 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 PANTHER PTHR11533:SF163 49 500 2.5E-34 T 23-04-2016 NIAKO_RS05075 5885fc2f5258168fed92573ff20fc9fc 559 Pfam PF01433 Peptidase family M1 52 386 1.2E-24 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS28920 389fca5636f94e06f179916e2c2ecba3 179 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 6 170 6.6E-43 T 23-04-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 NIAKO_RS28920 389fca5636f94e06f179916e2c2ecba3 179 SUPERFAMILY SSF56399 8 177 1.12E-59 T 23-04-2016 NIAKO_RS28920 389fca5636f94e06f179916e2c2ecba3 179 PANTHER PTHR12684 8 178 8.3E-60 T 23-04-2016 NIAKO_RS28920 389fca5636f94e06f179916e2c2ecba3 179 PANTHER PTHR12684:SF2 8 178 8.3E-60 T 23-04-2016 NIAKO_RS28920 389fca5636f94e06f179916e2c2ecba3 179 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 4 177 34.491 T 23-04-2016 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 Gene3D G3DSA:2.60.40.1120 40 127 3.6E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 SUPERFAMILY SSF56300 130 367 1.18E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 SUPERFAMILY SSF49464 40 125 3.22E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 Pfam PF00149 Calcineurin-like phosphoesterase 131 314 3.5E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 Gene3D G3DSA:3.60.21.10 128 370 1.3E-23 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 46 122 2.4E-22 T 23-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal NIAKO_RS16515 e4fb179288b1556e4dfb602a0939148e 496 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 328 481 1.9E-41 T 23-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal NIAKO_RS25725 9d0cfa2e5e8ea730cf0860f7b0da980a 226 SUPERFAMILY SSF52266 26 222 4.73E-50 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25725 9d0cfa2e5e8ea730cf0860f7b0da980a 226 PANTHER PTHR30383 4 220 8.5E-22 T 23-04-2016 NIAKO_RS25725 9d0cfa2e5e8ea730cf0860f7b0da980a 226 Gene3D G3DSA:3.40.50.1110 30 222 3.8E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25725 9d0cfa2e5e8ea730cf0860f7b0da980a 226 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 53 213 2.8E-26 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 Gene3D G3DSA:2.120.10.30 431 527 5.1E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 PANTHER PTHR24423:SF477 755 1000 2.5E-24 T 23-04-2016 NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 SUPERFAMILY SSF55874 860 1000 3.41E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 Gene3D G3DSA:3.30.565.10 863 1000 8.7E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 Pfam PF07494 Two component regulator propeller 490 513 0.001 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 SMART SM00387 899 1004 1.5E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 SUPERFAMILY SSF63829 387 562 3.6E-9 T 23-04-2016 NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 903 1000 2.0E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 SUPERFAMILY SSF47384 771 854 1.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS03200 12ee78039e3f4149780e7efb19837b2e 1008 PANTHER PTHR24423 755 1000 2.5E-24 T 23-04-2016 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00386 108 140 0.35 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00386 40 74 930.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00386 142 174 160.0 T 23-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SUPERFAMILY SSF48452 107 317 3.6E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 Pfam PF13432 Tetratricopeptide repeat 114 153 2.3E-4 T 23-04-2016 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00028 26 59 230.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00028 128 161 0.22 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SMART SM00028 94 127 0.85 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 Gene3D G3DSA:1.25.40.10 32 173 8.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 SUPERFAMILY SSF48452 31 175 8.85E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28625 26e31e96a8fad62ac1c528de1424c906 343 PANTHER PTHR23083 33 173 1.1E-14 T 23-04-2016 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 Gene3D G3DSA:3.40.50.1980 162 288 1.2E-17 T 23-04-2016 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 SUPERFAMILY SSF53807 6 292 4.32E-36 T 23-04-2016 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 PANTHER PTHR30535:SF2 5 292 4.0E-51 T 23-04-2016 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 Pfam PF01497 Periplasmic binding protein 76 262 9.6E-12 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 Gene3D G3DSA:3.40.50.1980 6 150 2.8E-10 T 23-04-2016 NIAKO_RS33680 b9b9abca70823bd738e574af5b2bf617 312 PANTHER PTHR30535 5 292 4.0E-51 T 23-04-2016 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 Pfam PF01975 Survival protein SurE 16 202 4.1E-56 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 PANTHER PTHR30457 13 264 1.2E-86 T 23-04-2016 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 Gene3D G3DSA:3.40.1210.10 14 262 2.3E-86 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 SUPERFAMILY SSF64167 15 263 4.97E-77 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 14 266 34.096 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS25925 d5bdce2f5f09d73cae95f8bc94e7bce8 266 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 16 252 5.2E-65 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS09705 12799d49a386d3211e071417abb9aeee 182 ProSitePatterns PS00018 EF-hand calcium-binding domain. 151 163 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS09705 12799d49a386d3211e071417abb9aeee 182 Gene3D G3DSA:1.10.10.690 5 131 6.1E-4 T 23-04-2016 IPR027405 YidB-like NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 SUPERFAMILY SSF55874 559 663 1.96E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 Gene3D G3DSA:3.30.565.10 532 660 2.0E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 SMART SM00387 571 664 0.0028 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 Pfam PF07695 7TM diverse intracellular signalling 220 428 8.6E-12 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 Pfam PF07730 Histidine kinase 467 528 2.9E-8 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 PANTHER PTHR24421 317 648 3.4E-30 T 23-04-2016 NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 PANTHER PTHR24421:SF10 317 648 3.4E-30 T 23-04-2016 NIAKO_RS22280 55a926625af62ebb3de4e9c3dc6097e3 664 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 661 8.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 20 370 4.8E-134 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 Gene3D G3DSA:3.20.20.70 29 361 5.8E-56 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 PIRSF PIRSF004762 1 383 5.4E-104 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 17 374 48.222 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 PANTHER PTHR22976:SF4 8 388 1.1E-131 T 23-04-2016 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 SUPERFAMILY SSF102114 28 325 1.01E-47 T 23-04-2016 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 Pfam PF04055 Radical SAM superfamily 71 244 2.7E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 SMART SM00729 67 288 0.0025 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 PANTHER PTHR22976 8 388 1.1E-131 T 23-04-2016 NIAKO_RS05035 4bbafe66a935673e40455209e56e545b 389 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 64 371 2.0E-100 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 Gene3D G3DSA:1.20.1600.10 143 208 0.001 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 PANTHER PTHR32347:SF16 1 415 4.2E-58 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 Pfam PF13437 HlyD family secretion protein 234 328 4.1E-12 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 Pfam PF02321 Outer membrane efflux protein 110 203 3.6E-5 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 Gene3D G3DSA:2.40.50.100 226 262 4.0E-9 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 Gene3D G3DSA:2.40.50.100 73 104 4.0E-9 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 SUPERFAMILY SSF56954 119 208 4.45E-5 T 23-04-2016 NIAKO_RS19815 5ed29a8c02421153d46c6757d95d75b5 415 PANTHER PTHR32347 1 415 4.2E-58 T 23-04-2016 NIAKO_RS35235 6159416ae0f1b9706cf74638c668fa88 331 Pfam PF02661 Fic/DOC family 247 281 7.6E-8 T 23-04-2016 IPR003812 Fido domain NIAKO_RS35235 6159416ae0f1b9706cf74638c668fa88 331 Pfam PF13310 Virulence protein RhuM family 63 144 3.9E-28 T 23-04-2016 IPR011204 Virulence protein RhuM-like NIAKO_RS35235 6159416ae0f1b9706cf74638c668fa88 331 SUPERFAMILY SSF140931 247 290 4.45E-5 T 23-04-2016 IPR003812 Fido domain NIAKO_RS35235 6159416ae0f1b9706cf74638c668fa88 331 PANTHER PTHR35810:SF2 1 331 2.7E-87 T 23-04-2016 NIAKO_RS35235 6159416ae0f1b9706cf74638c668fa88 331 PANTHER PTHR35810 1 331 2.7E-87 T 23-04-2016 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 Gene3D G3DSA:2.60.120.280 29 155 2.1E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 PANTHER PTHR11019 44 296 3.5E-41 T 23-04-2016 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 SUPERFAMILY SSF51215 38 128 1.57E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 Pfam PF12833 Helix-turn-helix domain 218 296 2.7E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 SUPERFAMILY SSF46689 251 297 3.94E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 PANTHER PTHR11019:SF80 44 296 3.5E-41 T 23-04-2016 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 SMART SM00342 212 295 2.0E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36455 dc20b3e9c77247dc2c7ebfecdf1c8c1a 298 Gene3D G3DSA:1.10.10.60 252 297 2.9E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37300 cfbb8e10d193e29c7345767b77e01f93 197 SUPERFAMILY SSF48613 9 190 4.77E-34 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS37300 cfbb8e10d193e29c7345767b77e01f93 197 Gene3D G3DSA:1.20.910.10 6 188 4.0E-39 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS37300 cfbb8e10d193e29c7345767b77e01f93 197 Pfam PF01126 Heme oxygenase 106 185 2.0E-6 T 23-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 NIAKO_RS22850 e759d071d462c9e076b7d09693e29638 406 PANTHER PTHR13914:SF0 2 404 1.2E-122 T 23-04-2016 NIAKO_RS22850 e759d071d462c9e076b7d09693e29638 406 PANTHER PTHR13914 2 404 1.2E-122 T 23-04-2016 IPR015659 Proline oxidase family GO:0004657|GO:0006562 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 NIAKO_RS22850 e759d071d462c9e076b7d09693e29638 406 Pfam PF01619 Proline dehydrogenase 82 391 1.9E-85 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 NIAKO_RS22850 e759d071d462c9e076b7d09693e29638 406 Gene3D G3DSA:3.20.20.220 72 405 1.6E-94 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like NIAKO_RS22850 e759d071d462c9e076b7d09693e29638 406 SUPERFAMILY SSF51730 73 404 1.45E-85 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like NIAKO_RS22435 4a911617ce27a54202c4e046e9aa51f1 317 Pfam PF01145 SPFH domain / Band 7 family 23 199 3.1E-27 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS22435 4a911617ce27a54202c4e046e9aa51f1 317 SMART SM00244 19 184 4.2E-17 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS22435 4a911617ce27a54202c4e046e9aa51f1 317 SUPERFAMILY SSF117892 50 185 7.72E-21 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS22435 4a911617ce27a54202c4e046e9aa51f1 317 PANTHER PTHR10264 8 317 3.4E-30 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 367 391 - T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PANTHER PTHR11686:SF9 24 554 2.0E-196 T 23-04-2016 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 SUPERFAMILY SSF56235 22 554 2.89E-176 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 473 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 239 255 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 269 288 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 391 409 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 367 385 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 447 1.5E-64 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 PANTHER PTHR11686 24 554 2.0E-196 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 Pfam PF01019 Gamma-glutamyltranspeptidase 45 548 5.8E-164 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS01995 b2698fb049e8b7008091196f83e79d9e 554 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 31 546 8.8E-168 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS26310 93dc29fd73322a91e3af9d362e0f904c 235 Pfam PF08889 WbqC-like protein family 7 226 1.2E-67 T 23-04-2016 IPR014985 WbqC-like protein family NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 PANTHER PTHR32282:SF11 403 690 1.5E-157 T 23-04-2016 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 PANTHER PTHR32282:SF11 7 323 1.5E-157 T 23-04-2016 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 Pfam PF00912 Transglycosylase 56 232 1.2E-53 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 SUPERFAMILY SSF56601 266 326 3.76E-96 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 SUPERFAMILY SSF56601 404 704 3.76E-96 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 SUPERFAMILY SSF56601 214 236 3.76E-96 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 SUPERFAMILY SSF53955 45 259 9.56E-61 T 23-04-2016 IPR023346 Lysozyme-like domain NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 Pfam PF00905 Penicillin binding protein transpeptidase domain 410 647 1.4E-16 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 Gene3D G3DSA:1.10.3810.10 65 234 1.5E-59 T 23-04-2016 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 PANTHER PTHR32282 403 690 1.5E-157 T 23-04-2016 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 PANTHER PTHR32282 7 323 1.5E-157 T 23-04-2016 NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 Gene3D G3DSA:3.40.710.10 402 711 3.9E-101 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS01835 cfd96452d22393a45fa1281979ccf882 795 Gene3D G3DSA:3.40.710.10 235 326 3.9E-101 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS01585 5fb6d10c140b1be63998969dfa5ab0e3 101 SMART SM00450 4 101 4.2E-16 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS01585 5fb6d10c140b1be63998969dfa5ab0e3 101 SUPERFAMILY SSF52821 2 97 6.02E-28 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS01585 5fb6d10c140b1be63998969dfa5ab0e3 101 Gene3D G3DSA:3.40.250.10 2 98 3.5E-27 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS01585 5fb6d10c140b1be63998969dfa5ab0e3 101 Pfam PF00581 Rhodanese-like domain 5 98 1.8E-14 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SUPERFAMILY SSF51445 24 376 3.79E-90 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SMART SM01217 784 853 1.1E-18 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PANTHER PTHR30620:SF8 582 866 7.1E-260 T 23-04-2016 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PANTHER PTHR30620:SF8 1 439 7.1E-260 T 23-04-2016 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 335 2.3E-45 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Pfam PF14310 Fibronectin type III-like domain 784 853 1.9E-14 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SUPERFAMILY SSF52279 377 445 7.85E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SUPERFAMILY SSF52279 597 750 7.85E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Gene3D G3DSA:3.20.20.300 24 348 1.8E-101 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SMART SM00758 461 599 3.3E-4 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 377 747 4.1E-52 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Gene3D G3DSA:3.40.50.1700 597 750 7.2E-65 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Gene3D G3DSA:3.40.50.1700 363 446 7.2E-65 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PANTHER PTHR30620 582 866 7.1E-260 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PANTHER PTHR30620 1 439 7.1E-260 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 256 274 3.8E-8 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 3.8E-8 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 87 106 3.8E-8 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 Pfam PF07691 PA14 domain 461 582 1.9E-10 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS12050 212c6f9c0a06abe958109d483f36f1c6 866 SUPERFAMILY SSF56988 463 626 6.28E-14 T 23-04-2016 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 SUPERFAMILY SSF53167 4 273 2.75E-90 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 Gene3D G3DSA:3.40.50.1580 5 273 5.2E-99 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 3.5E-97 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 PANTHER PTHR11904:SF9 1 273 1.1E-121 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 PANTHER PTHR11904 1 273 1.1E-121 T 23-04-2016 IPR001369 PNP/MTAP phosphorylase NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 Pfam PF01048 Phosphorylase superfamily 25 270 4.9E-50 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 271 3.9E-100 T 23-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS01880 9c1ad0a08dcf098d6f1bc0bd2dfafbdf 273 PIRSF PIRSF000477 1 273 9.7E-98 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS02600 bd51ba15ef59f3c9a13b783db87927e7 236 Gene3D G3DSA:2.70.98.30 123 187 9.9E-6 T 23-04-2016 NIAKO_RS02600 bd51ba15ef59f3c9a13b783db87927e7 236 Gene3D G3DSA:2.60.40.1180 62 122 4.7E-7 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS02600 bd51ba15ef59f3c9a13b783db87927e7 236 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 68 230 4.1E-15 T 23-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 NIAKO_RS02600 bd51ba15ef59f3c9a13b783db87927e7 236 SUPERFAMILY SSF74650 58 227 1.4E-21 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803:SF1 198 316 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803:SF1 1 181 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803:SF1 332 699 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 594 694 2.2E-32 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 Pfam PF10566 Glycoside hydrolase 97 293 592 1.0E-111 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 SUPERFAMILY SSF51445 343 576 2.32E-6 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803 198 316 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803 1 181 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 PANTHER PTHR35803 332 699 0.0 T 23-04-2016 NIAKO_RS08175 88e24b01ab030a67b69880d031f447ca 699 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 28 288 1.0E-72 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 SUPERFAMILY SSF55785 132 255 1.2E-14 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Gene3D G3DSA:3.30.450.20 143 255 6.3E-18 T 23-04-2016 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 SMART SM00387 395 487 1.0E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 264 1.6E-6 T 23-04-2016 IPR000014 PAS domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Gene3D G3DSA:3.40.50.2300 4 142 6.1E-17 T 23-04-2016 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 485 9.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 SUPERFAMILY SSF55874 360 484 4.85E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Pfam PF08447 PAS fold 167 244 3.3E-7 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 PANTHER PTHR24421:SF18 245 484 2.3E-29 T 23-04-2016 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Gene3D G3DSA:3.30.565.10 393 487 2.7E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 PANTHER PTHR24421 245 484 2.3E-29 T 23-04-2016 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 SMART SM00448 7 119 6.9E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 SUPERFAMILY SSF52172 5 140 6.55E-19 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Pfam PF07730 Histidine kinase 293 354 1.1E-6 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS36685 a039696bc11a2bf8c1335ed98b88be18 491 Pfam PF00072 Response regulator receiver domain 38 110 4.7E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 SUPERFAMILY SSF51735 102 286 5.29E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 PANTHER PTHR10996:SF91 11 313 5.6E-115 T 23-04-2016 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 314 1.6E-29 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 Gene3D G3DSA:3.40.50.720 1 108 3.2E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 PANTHER PTHR10996 11 313 5.6E-115 T 23-04-2016 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 SUPERFAMILY SSF52283 1 136 9.07E-32 T 23-04-2016 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 1.1E-58 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NIAKO_RS12535 3dfed65eed7d5d94ad8162e45b8dda5c 316 Gene3D G3DSA:3.40.50.720 109 287 2.7E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 501 557 0.066 T 23-04-2016 IPR013378 Listeria/Bacterioides repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 423 481 2.4E-4 T 23-04-2016 IPR013378 Listeria/Bacterioides repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 450 484 1.1E-6 T 23-04-2016 IPR013378 Listeria/Bacterioides repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SMART SM00710 136 158 25.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SMART SM00710 241 264 2300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SMART SM00710 268 290 290.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SMART SM00710 201 223 440.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SMART SM00710 170 198 2300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 PANTHER PTHR40088 1 349 7.3E-24 T 23-04-2016 NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SUPERFAMILY SSF51126 8 406 2.73E-58 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 Gene3D G3DSA:2.160.20.10 17 406 5.1E-80 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 Pfam PF03422 Carbohydrate binding module (family 6) 585 701 6.4E-9 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 735 805 1.9E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 Pfam PF13229 Right handed beta helix region 109 301 7.2E-14 T 23-04-2016 NIAKO_RS22590 11a6d469abce1e707f44bf074fd8be99 813 SUPERFAMILY SSF49785 581 702 2.27E-20 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 Gene3D G3DSA:2.40.50.40 142 211 2.6E-22 T 23-04-2016 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 SUPERFAMILY SSF52172 6 121 8.4E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 Gene3D G3DSA:3.40.50.2300 2 120 3.8E-28 T 23-04-2016 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 Pfam PF04397 LytTr DNA-binding domain 152 229 2.6E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 SMART SM00448 7 115 1.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 PANTHER PTHR26402:SF522 7 118 2.8E-30 T 23-04-2016 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 Pfam PF00072 Response regulator receiver domain 10 116 1.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 SMART SM00850 151 242 4.0E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS30870 69165e312b745d677020b444b4095b96 243 PANTHER PTHR26402 7 118 2.8E-30 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 Gene3D G3DSA:3.40.50.200 182 507 8.3E-43 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795:SF310 212 218 7.4E-13 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795:SF310 382 648 7.4E-13 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795:SF310 332 365 7.4E-13 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795:SF310 1729 1736 7.4E-13 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795:SF310 263 305 7.4E-13 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 Gene3D G3DSA:2.60.120.380 517 629 6.8E-24 T 23-04-2016 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1701 1769 2.7E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PRINTS PR00723 Subtilisin serine protease family (S8) signature 230 249 9.1E-9 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PRINTS PR00723 Subtilisin serine protease family (S8) signature 438 454 9.1E-9 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PRINTS PR00723 Subtilisin serine protease family (S8) signature 260 273 9.1E-9 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 439 449 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795 212 218 7.4E-13 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795 382 648 7.4E-13 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795 332 365 7.4E-13 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795 1729 1736 7.4E-13 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 PANTHER PTHR10795 263 305 7.4E-13 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 SUPERFAMILY SSF52743 227 510 1.27E-42 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 Pfam PF07705 CARDB 825 915 8.5E-6 T 23-04-2016 IPR011635 CARDB domain NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 Pfam PF00082 Subtilase family 241 495 3.8E-26 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 Gene3D G3DSA:2.60.40.10 1604 1684 2.0E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS27615 35e728a307d4af988c90d3c55a7da1ee 1770 SUPERFAMILY SSF49785 522 630 4.68E-17 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS07220 2f3c0fc71452b8f528be592bb7b001f8 642 Pfam PF14322 Starch-binding associating with outer membrane 23 237 5.9E-16 T 23-04-2016 NIAKO_RS07220 2f3c0fc71452b8f528be592bb7b001f8 642 Pfam PF07980 SusD family 326 642 6.8E-52 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS07220 2f3c0fc71452b8f528be592bb7b001f8 642 Gene3D G3DSA:1.25.40.10 462 565 2.4E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07220 2f3c0fc71452b8f528be592bb7b001f8 642 Gene3D G3DSA:1.25.40.10 219 369 2.4E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07220 2f3c0fc71452b8f528be592bb7b001f8 642 SUPERFAMILY SSF48452 18 642 3.16E-102 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 PIRSF PIRSF006250 3 283 2.4E-84 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 280 7.5E-60 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 Gene3D G3DSA:3.20.20.70 133 271 2.8E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 SUPERFAMILY SSF54675 9 110 5.1E-24 T 23-04-2016 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 109 4.1E-19 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 PANTHER PTHR32179 11 280 7.2E-120 T 23-04-2016 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 Gene3D G3DSA:3.90.1170.20 4 132 1.4E-41 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 SUPERFAMILY SSF51690 111 280 3.61E-56 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS33800 1a233c09a20bec15bb44b79c75992e62 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 280 3.3E-92 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 Gene3D G3DSA:3.40.50.720 29 275 8.2E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PANTHER PTHR24322:SF105 38 166 3.2E-68 T 23-04-2016 NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PANTHER PTHR24322:SF105 182 214 3.2E-68 T 23-04-2016 NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 43 272 2.4E-65 T 23-04-2016 NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 170 8.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 201 8.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 110 121 8.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 35 52 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 110 121 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 1.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 SUPERFAMILY SSF51735 32 274 2.03E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PANTHER PTHR24322 38 166 3.2E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 PANTHER PTHR24322 182 214 3.2E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08080 bdd0cda5948b2725b39991cd16d4a489 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 169 197 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS10230 a751e872020280dc9b95f49f152970ef 126 SUPERFAMILY SSF54593 11 124 6.98E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS10230 a751e872020280dc9b95f49f152970ef 126 PANTHER PTHR33993 9 121 3.7E-22 T 23-04-2016 NIAKO_RS10230 a751e872020280dc9b95f49f152970ef 126 Gene3D G3DSA:3.10.180.10 12 122 1.5E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS10230 a751e872020280dc9b95f49f152970ef 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 116 4.7E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Pfam PF09261 Alpha mannosidase middle domain 304 350 3.9E-5 T 23-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 PANTHER PTHR11607 43 560 2.5E-31 T 23-04-2016 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Gene3D G3DSA:1.20.1270.50 305 349 1.6E-4 T 23-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 76 194 2.3E-7 T 23-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 SUPERFAMILY SSF74650 388 773 2.35E-35 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Gene3D G3DSA:3.20.110.10 43 194 5.1E-10 T 23-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 SUPERFAMILY SSF88713 42 202 1.56E-17 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 SUPERFAMILY SSF88688 305 350 5.89E-5 T 23-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 PANTHER PTHR11607:SF15 43 560 2.5E-31 T 23-04-2016 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 415 559 3.6E-11 T 23-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 NIAKO_RS06690 4280aa59afaf199027496b1c1ce83df0 811 Gene3D G3DSA:2.60.40.1180 417 467 8.9E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 PIRSF PIRSF000216 7 153 1.1E-48 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 PANTHER PTHR10371:SF7 1 152 1.6E-60 T 23-04-2016 NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 SUPERFAMILY SSF52833 2 152 1.68E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 PANTHER PTHR10371 1 152 1.6E-60 T 23-04-2016 NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 110 128 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 Gene3D G3DSA:3.40.30.10 73 151 1.2E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 12 152 8.1E-49 T 23-04-2016 NIAKO_RS14580 7be0c21f81e8432f3abc36d1b75ddeeb 153 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 153 8.1E-45 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 Pfam PF02310 B12 binding domain 10 122 1.7E-21 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 9 135 7.4E-51 T 23-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 SUPERFAMILY SSF52242 3 133 2.09E-49 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 Gene3D G3DSA:3.40.50.280 3 131 1.9E-54 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 PANTHER PTHR23408 7 114 1.4E-57 T 23-04-2016 NIAKO_RS27705 8b1cc8ba0c5ef40770d7b516dfbe2bfa 139 PANTHER PTHR23408:SF8 7 114 1.4E-57 T 23-04-2016 NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 2.3E-15 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 PANTHER PTHR10072 9 114 6.8E-31 T 23-04-2016 NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 SUPERFAMILY SSF89360 9 102 1.63E-22 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 1.1E-28 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NIAKO_RS04885 f35bbae0d4561ad5a965656df4387e15 114 Gene3D G3DSA:2.60.300.12 9 103 4.8E-24 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS03520 f8f663379719018c2155df318e6e2c08 302 PANTHER PTHR23344 35 300 1.5E-36 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 NIAKO_RS03520 f8f663379719018c2155df318e6e2c08 302 PANTHER PTHR23344:SF27 35 300 1.5E-36 T 23-04-2016 NIAKO_RS03520 f8f663379719018c2155df318e6e2c08 302 Gene3D G3DSA:3.20.20.190 32 299 6.7E-57 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS03520 f8f663379719018c2155df318e6e2c08 302 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 37 295 1.3E-31 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NIAKO_RS03520 f8f663379719018c2155df318e6e2c08 302 SUPERFAMILY SSF51695 35 299 4.97E-55 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 PANTHER PTHR23514 12 355 1.2E-21 T 23-04-2016 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 Gene3D G3DSA:1.20.1250.20 12 193 3.6E-17 T 23-04-2016 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 Gene3D G3DSA:1.20.1250.20 215 361 6.6E-8 T 23-04-2016 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 Gene3D G3DSA:1.20.1250.20 396 418 6.6E-8 T 23-04-2016 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 Pfam PF07690 Major Facilitator Superfamily 18 343 2.4E-18 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 SUPERFAMILY SSF103473 8 360 1.44E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS30785 277aad80260951f60124b8bc240269e7 435 SUPERFAMILY SSF103473 400 426 1.44E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Gene3D G3DSA:2.60.40.1120 58 141 6.2E-17 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 SUPERFAMILY SSF49452 54 133 4.71E-17 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 PANTHER PTHR32552:SF10 138 835 5.9E-133 T 23-04-2016 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Pfam PF13715 CarboxypepD_reg-like domain 58 144 7.8E-19 T 23-04-2016 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 166 835 2.8E-90 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 PANTHER PTHR32552 138 835 5.9E-133 T 23-04-2016 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Pfam PF00593 TonB dependent receptor 577 834 4.7E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Pfam PF07715 TonB-dependent Receptor Plug Domain 164 262 1.4E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 SUPERFAMILY SSF56935 130 835 2.07E-124 T 23-04-2016 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Gene3D G3DSA:2.170.130.10 142 272 3.0E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13005 86869caf2685cbeffc651ed7137f14d6 835 Gene3D G3DSA:2.40.170.20 276 835 2.7E-121 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19890 c54cea9c80def6ff783e2094951cb5f9 215 SUPERFAMILY SSF52218 3 142 9.67E-22 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS19890 c54cea9c80def6ff783e2094951cb5f9 215 Pfam PF03358 NADPH-dependent FMN reductase 7 140 2.8E-16 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NIAKO_RS19890 c54cea9c80def6ff783e2094951cb5f9 215 Gene3D G3DSA:3.40.50.360 3 145 1.3E-16 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 Gene3D G3DSA:1.25.40.10 211 320 7.0E-42 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 Gene3D G3DSA:1.25.40.10 439 530 7.0E-42 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 Pfam PF14322 Starch-binding associating with outer membrane 46 231 1.9E-16 T 23-04-2016 NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 Pfam PF07980 SusD family 278 599 1.5E-31 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 SUPERFAMILY SSF48452 388 599 3.92E-99 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15300 88a07366ac8e05e6111bc3830fdda81f 599 SUPERFAMILY SSF48452 21 354 3.92E-99 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04780 7ea6471d30876af888f666721843aa65 185 PANTHER PTHR13887 18 176 2.3E-21 T 23-04-2016 NIAKO_RS04780 7ea6471d30876af888f666721843aa65 185 Pfam PF13462 Thioredoxin 14 175 3.5E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS04780 7ea6471d30876af888f666721843aa65 185 SUPERFAMILY SSF52833 14 174 3.92E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS04780 7ea6471d30876af888f666721843aa65 185 Gene3D G3DSA:3.40.30.10 7 176 3.7E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 PANTHER PTHR30069 22 637 2.9E-49 T 23-04-2016 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 Gene3D G3DSA:2.60.40.1120 24 100 3.9E-18 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 Gene3D G3DSA:2.40.170.20 234 747 1.4E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 Pfam PF13715 CarboxypepD_reg-like domain 25 108 5.0E-14 T 23-04-2016 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 SUPERFAMILY SSF56935 496 760 6.96E-69 T 23-04-2016 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 SUPERFAMILY SSF56935 104 467 6.96E-69 T 23-04-2016 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 218 3.3E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 Gene3D G3DSA:2.170.130.10 106 217 1.5E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 SUPERFAMILY SSF49464 24 110 1.27E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS10790 22e7acdecf14ebf6f979638f4cfc5960 783 PANTHER PTHR30069:SF1 22 637 2.9E-49 T 23-04-2016 NIAKO_RS05180 27c544b33d94f8b3b93d154740842d2e 982 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 905 982 6.2E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS05180 27c544b33d94f8b3b93d154740842d2e 982 SUPERFAMILY SSF48726 521 609 1.11E-5 T 23-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 NIAKO_RS05180 27c544b33d94f8b3b93d154740842d2e 982 Gene3D G3DSA:2.60.40.10 804 891 1.2E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 SUPERFAMILY SSF52200 505 648 7.32E-18 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 Gene3D G3DSA:3.40.50.10140 510 621 9.7E-11 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 SUPERFAMILY SSF52540 191 357 1.48E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 Pfam PF13676 TIR domain 510 612 1.8E-12 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 SMART SM00255 507 650 0.0032 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS06455 22596188ca2c442217d90be731d2c772 653 Gene3D G3DSA:3.40.50.300 188 280 4.6E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06770 fcd313d5456c76d120ba9fa3d6e0d3e5 493 Gene3D G3DSA:1.25.40.10 345 437 1.7E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06770 fcd313d5456c76d120ba9fa3d6e0d3e5 493 Gene3D G3DSA:1.25.40.10 204 309 1.7E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06770 fcd313d5456c76d120ba9fa3d6e0d3e5 493 SUPERFAMILY SSF48452 16 492 8.72E-103 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06770 fcd313d5456c76d120ba9fa3d6e0d3e5 493 Pfam PF14322 Starch-binding associating with outer membrane 93 223 5.4E-20 T 23-04-2016 NIAKO_RS06770 fcd313d5456c76d120ba9fa3d6e0d3e5 493 Pfam PF07980 SusD family 347 492 3.4E-33 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PANTHER PTHR24322 153 189 5.9E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PANTHER PTHR24322 8 135 5.9E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 Gene3D G3DSA:3.40.50.720 1 237 6.1E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 Pfam PF00106 short chain dehydrogenase 4 196 4.6E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33570 56969ae4777340d86fa77ae725fb879b 244 SUPERFAMILY SSF51735 2 237 3.68E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23540 41b3bc5343a21968226ad63622a92b34 134 SUPERFAMILY SSF54427 9 133 6.31E-29 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS23540 41b3bc5343a21968226ad63622a92b34 134 Pfam PF12680 SnoaL-like domain 11 119 9.8E-12 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS23540 41b3bc5343a21968226ad63622a92b34 134 Gene3D G3DSA:3.10.450.50 11 133 6.2E-25 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 Gene3D G3DSA:2.40.50.100 191 216 4.3E-14 T 23-04-2016 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 Gene3D G3DSA:2.40.50.100 81 115 4.3E-14 T 23-04-2016 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 382 4.3E-62 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 PANTHER PTHR30469 24 384 5.6E-59 T 23-04-2016 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 PANTHER PTHR30469:SF4 24 384 5.6E-59 T 23-04-2016 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 SUPERFAMILY SSF111369 71 307 8.24E-21 T 23-04-2016 NIAKO_RS03810 03daa5f38ff111cbe1a91f35089d12c1 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 301 4.3E-25 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS35870 1f8744d294028733f5c7d024e3695ad8 549 Pfam PF07980 SusD family 407 549 2.6E-16 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS35870 1f8744d294028733f5c7d024e3695ad8 549 Gene3D G3DSA:1.25.40.10 412 498 6.1E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35870 1f8744d294028733f5c7d024e3695ad8 549 Gene3D G3DSA:1.25.40.10 201 304 6.1E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35870 1f8744d294028733f5c7d024e3695ad8 549 Pfam PF14322 Starch-binding associating with outer membrane 86 221 5.4E-15 T 23-04-2016 NIAKO_RS35870 1f8744d294028733f5c7d024e3695ad8 549 SUPERFAMILY SSF48452 20 549 4.3E-89 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 PANTHER PTHR12418 17 143 5.1E-52 T 23-04-2016 NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 SUPERFAMILY SSF54637 16 141 4.15E-30 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 PANTHER PTHR12418:SF33 17 143 5.1E-52 T 23-04-2016 NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 Pfam PF03061 Thioesterase superfamily 51 129 8.8E-14 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 Gene3D G3DSA:3.10.129.10 4 140 1.1E-48 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS05755 bee97535f0596d8a775ac285c4d38754 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 1.3E-37 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain NIAKO_RS03580 e0ee7f8d6aea96c61ac2f160a50e794b 495 SUPERFAMILY SSF48452 21 494 1.19E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03580 e0ee7f8d6aea96c61ac2f160a50e794b 495 Pfam PF07980 SusD family 346 494 7.4E-29 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS03580 e0ee7f8d6aea96c61ac2f160a50e794b 495 Gene3D G3DSA:1.25.40.10 216 422 3.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03580 e0ee7f8d6aea96c61ac2f160a50e794b 495 Pfam PF14322 Starch-binding associating with outer membrane 26 236 3.0E-20 T 23-04-2016 NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 Gene3D G3DSA:3.40.50.720 3 259 4.3E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PANTHER PTHR24322 141 172 2.9E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PANTHER PTHR24322 7 125 2.9E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 4.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 4.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 4.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 4.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 Pfam PF00106 short chain dehydrogenase 3 180 1.5E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 1.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 1.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23710 df01ead936608dd05fd5947b461142d1 266 SUPERFAMILY SSF51735 3 241 1.27E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 Gene3D G3DSA:1.10.357.10 5 191 8.3E-34 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 PANTHER PTHR30055:SF79 1 191 6.0E-35 T 23-04-2016 NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 6.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 PANTHER PTHR30055 1 191 6.0E-35 T 23-04-2016 NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 SUPERFAMILY SSF46689 5 83 3.64E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20405 eaf748b70ecfe679955f1e1970035f7c 196 SUPERFAMILY SSF48498 81 184 7.05E-13 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 PANTHER PTHR38471:SF2 4 118 5.3E-37 T 23-04-2016 NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 SUPERFAMILY SSF158446 6 118 5.62E-39 T 23-04-2016 NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 12 118 7.9E-40 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 PANTHER PTHR38471 4 118 5.3E-37 T 23-04-2016 NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 Pfam PF05635 23S rRNA-intervening sequence protein 9 112 8.2E-41 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS13210 bf27356ef4184e1220a9996b3dbe0697 120 Gene3D G3DSA:1.20.1440.60 4 118 5.1E-40 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532:SF57 3 291 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532:SF57 343 473 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532:SF57 579 874 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532:SF57 906 1100 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 Gene3D G3DSA:2.170.130.10 125 243 1.2E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 364 442 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 934 980 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 114 261 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 1020 1102 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 474 529 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 732 834 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF56935 560 697 5.04E-67 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 Pfam PF13715 CarboxypepD_reg-like domain 30 116 3.2E-11 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 ProSitePatterns PS00018 EF-hand calcium-binding domain. 925 937 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 SUPERFAMILY SSF49464 29 124 2.75E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 233 3.9E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 1102 1.7E-247 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 209 239 8.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 Gene3D G3DSA:2.60.40.1120 30 124 5.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532 3 291 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532 343 473 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532 579 874 2.7E-251 T 23-04-2016 NIAKO_RS09470 f54b3cb33816120c941b5c86cee92e04 1102 PANTHER PTHR11532 906 1100 2.7E-251 T 23-04-2016 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 SMART SM00345 22 81 6.0E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 SUPERFAMILY SSF46785 18 85 3.97E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 SUPERFAMILY SSF48008 102 233 9.42E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 3.9E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 SMART SM00895 106 229 2.2E-15 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 Gene3D G3DSA:1.10.10.10 17 83 5.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 Gene3D G3DSA:1.20.120.530 101 231 3.0E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PANTHER PTHR11751 100 122 1.9E-26 T 23-04-2016 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PANTHER PTHR11751 20 84 1.9E-26 T 23-04-2016 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 Pfam PF07729 FCD domain 107 228 7.8E-20 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 9.6E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 9.6E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PANTHER PTHR11751:SF382 100 122 1.9E-26 T 23-04-2016 NIAKO_RS25690 141872b45d7cc71624f56eb4af387df7 240 PANTHER PTHR11751:SF382 20 84 1.9E-26 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 Gene3D G3DSA:3.10.50.40 282 415 3.7E-14 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 Gene3D G3DSA:3.10.50.40 173 275 3.5E-21 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 PANTHER PTHR10657:SF11 1 310 1.9E-31 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 SUPERFAMILY SSF109998 28 188 1.18E-16 T 23-04-2016 IPR027304 Trigger factor/SurA domain NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 PANTHER PTHR10657 1 310 1.9E-31 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 Pfam PF13616 PPIC-type PPIASE domain 175 273 8.4E-18 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 SUPERFAMILY SSF54534 171 275 1.5E-19 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 SUPERFAMILY SSF54534 279 375 1.31E-9 T 23-04-2016 NIAKO_RS30015 64ef4cd6b8a304763bd40b801b26b6ba 457 Pfam PF00639 PPIC-type PPIASE domain 284 373 2.3E-7 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 PANTHER PTHR33706:SF1 74 201 5.6E-14 T 23-04-2016 NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 PANTHER PTHR33706 74 201 5.6E-14 T 23-04-2016 NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 Gene3D G3DSA:2.20.110.10 101 198 1.4E-7 T 23-04-2016 NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 SUPERFAMILY SSF82185 100 188 1.44E-12 T 23-04-2016 NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 Pfam PF07661 MORN repeat variant 151 172 0.0026 T 23-04-2016 IPR011652 MORN variant NIAKO_RS22495 adc1be5f900ae8e7fccf4ac2d64958e5 201 Pfam PF07661 MORN repeat variant 103 122 0.0036 T 23-04-2016 IPR011652 MORN variant NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 Gene3D G3DSA:2.30.42.10 244 319 9.8E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 SUPERFAMILY SSF50156 237 278 5.52E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 Pfam PF03572 Peptidase family S41 370 509 6.1E-11 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 SMART SM00245 316 510 0.0011 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 SUPERFAMILY SSF52096 158 243 2.15E-27 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 SUPERFAMILY SSF52096 337 526 2.15E-27 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29290 7dd14ea142003af7b599f593c70f8cd5 535 Gene3D G3DSA:3.90.226.10 337 530 1.2E-21 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 233 2.1E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 Gene3D G3DSA:2.170.130.10 115 237 2.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 PANTHER PTHR11532 8 364 1.9E-83 T 23-04-2016 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 SUPERFAMILY SSF49464 29 108 2.09E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 Gene3D G3DSA:2.60.40.1120 29 114 1.8E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 209 239 2.6E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 SUPERFAMILY SSF56935 108 256 8.7E-34 T 23-04-2016 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 SUPERFAMILY SSF56935 330 366 8.7E-34 T 23-04-2016 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 PANTHER PTHR11532:SF57 8 364 1.9E-83 T 23-04-2016 NIAKO_RS36940 3466497de5065ee1b4c9c5ec28350b74 387 Pfam PF13715 CarboxypepD_reg-like domain 30 110 3.2E-11 T 23-04-2016 NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 SUPERFAMILY SSF75005 45 366 3.49E-66 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 PIRSF PIRSF016202 7 369 7.3E-97 T 23-04-2016 IPR007184 Mannoside phosphorylase NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 PANTHER PTHR34106:SF2 1 369 2.7E-101 T 23-04-2016 NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 PANTHER PTHR34106 1 369 2.7E-101 T 23-04-2016 NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 62 364 5.5E-39 T 23-04-2016 IPR007184 Mannoside phosphorylase NIAKO_RS08190 80874c7b751aeb7ed3addcfa2cfe95de 369 Gene3D G3DSA:2.115.10.20 12 366 1.3E-99 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 Pfam PF00488 MutS domain V 339 520 1.5E-28 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 SMART SM00534 336 521 4.8E-44 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 PANTHER PTHR11361 73 609 3.1E-152 T 23-04-2016 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 PIRSF PIRSF005814 2 704 1.5E-165 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 PANTHER PTHR11361:SF14 73 609 3.1E-152 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 SMART SM00533 12 317 3.5E-5 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 SUPERFAMILY SSF48334 95 291 2.22E-12 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 Gene3D G3DSA:3.40.50.300 296 522 3.0E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05100 9d9fbbd0ef25cefad153db0f4aae0822 704 SUPERFAMILY SSF52540 295 521 5.05E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 125 1089 2.0E-245 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 Gene3D G3DSA:2.60.40.1120 127 210 2.3E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF49464 126 203 3.53E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 PANTHER PTHR11532:SF57 17 480 6.8E-219 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 PANTHER PTHR11532:SF57 590 1087 6.8E-219 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 PANTHER PTHR11532 17 480 6.8E-219 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 PANTHER PTHR11532 590 1087 6.8E-219 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SMART SM00965 65 116 0.002 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF56935 401 489 6.23E-87 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF56935 1007 1047 6.23E-87 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF56935 518 857 6.23E-87 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF56935 927 971 6.23E-87 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 SUPERFAMILY SSF56935 203 345 6.23E-87 T 23-04-2016 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 Pfam PF07715 TonB-dependent Receptor Plug Domain 214 321 7.2E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 Gene3D G3DSA:2.170.130.10 211 325 2.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 297 327 2.4E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS26050 fa114f3cac9cb4fbc84d1d8d8d2c2d53 1089 Pfam PF13715 CarboxypepD_reg-like domain 127 207 3.3E-15 T 23-04-2016 NIAKO_RS25625 dca40b7e97fd2103ca48ae96331d144b 516 Pfam PF07980 SusD family 263 516 1.3E-37 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS25625 dca40b7e97fd2103ca48ae96331d144b 516 Gene3D G3DSA:1.25.40.10 207 321 1.4E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25625 dca40b7e97fd2103ca48ae96331d144b 516 Gene3D G3DSA:1.25.40.10 364 450 1.4E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25625 dca40b7e97fd2103ca48ae96331d144b 516 SUPERFAMILY SSF48452 18 516 5.06E-106 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25625 dca40b7e97fd2103ca48ae96331d144b 516 Pfam PF14322 Starch-binding associating with outer membrane 38 220 1.0E-19 T 23-04-2016 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 10 263 6.0E-84 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 SUPERFAMILY SSF52954 374 477 4.53E-31 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 185 202 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 339 351 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 424 443 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 217 234 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 234 244 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 164 176 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 1.1E-48 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 179 358 2.0E-11 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 SUPERFAMILY SSF55681 8 390 3.67E-113 T 23-04-2016 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Gene3D G3DSA:3.40.50.800 383 477 2.0E-36 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Pfam PF03129 Anticodon binding domain 388 476 3.1E-18 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 PANTHER PTHR10745 9 478 1.0E-190 T 23-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 479 46.297 T 23-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Gene3D G3DSA:3.30.930.10 10 93 1.4E-142 T 23-04-2016 NIAKO_RS27810 be94614e26637cfde45ce558e2038668 479 Gene3D G3DSA:3.30.930.10 150 382 1.4E-142 T 23-04-2016 NIAKO_RS26480 699372e41226928d98a453755e587282 627 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 28 286 4.0E-49 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS26480 699372e41226928d98a453755e587282 627 PANTHER PTHR35803 1 627 1.0E-121 T 23-04-2016 NIAKO_RS26480 699372e41226928d98a453755e587282 627 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 533 625 2.3E-21 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS26480 699372e41226928d98a453755e587282 627 Pfam PF10566 Glycoside hydrolase 97 297 530 7.2E-53 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS26480 699372e41226928d98a453755e587282 627 SUPERFAMILY SSF51445 316 510 3.26E-11 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 PANTHER PTHR14552:SF13 1 118 7.8E-26 T 23-04-2016 NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 111 3.7E-14 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 SUPERFAMILY SSF101386 3 109 5.56E-22 T 23-04-2016 NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 PANTHER PTHR14552 1 118 7.8E-26 T 23-04-2016 NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 Gene3D G3DSA:1.10.287.1080 1 103 1.2E-21 T 23-04-2016 NIAKO_RS27820 d36517e9bc05d3c77641671a3d61f894 119 PIRSF PIRSF029904 1 119 2.1E-39 T 23-04-2016 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 Gene3D G3DSA:3.40.50.1100 135 298 1.6E-61 T 23-04-2016 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 PANTHER PTHR10314 3 298 2.7E-126 T 23-04-2016 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 PANTHER PTHR10314:SF110 3 298 2.7E-126 T 23-04-2016 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 Gene3D G3DSA:3.40.50.1100 43 134 3.1E-41 T 23-04-2016 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 287 1.9E-66 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 SUPERFAMILY SSF53686 3 299 1.13E-90 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 300 6.3E-119 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NIAKO_RS34355 9a429b5a086964ecb05d66e40654d7e9 304 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 300 9.7E-123 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 Pfam PF00849 RNA pseudouridylate synthase 112 271 4.6E-35 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 SUPERFAMILY SSF55120 96 347 2.4E-68 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 35 346 2.9E-90 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 SUPERFAMILY SSF55174 37 125 9.76E-13 T 23-04-2016 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 PANTHER PTHR11079:SF73 16 356 9.0E-132 T 23-04-2016 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 SMART SM00363 38 107 7.9E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 Pfam PF01479 S4 domain 38 84 7.9E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 Gene3D G3DSA:3.10.290.10 37 86 3.5E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 161 175 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS21725 bbe7aa0d53df45f46c8a0a223ce78341 356 PANTHER PTHR11079 16 356 9.0E-132 T 23-04-2016 NIAKO_RS17030 a35fd9fbdfb4987fe12b3c892241470a 85 SMART SM00360 2 74 3.1E-7 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS17030 a35fd9fbdfb4987fe12b3c892241470a 85 Gene3D G3DSA:3.30.70.330 2 75 1.2E-9 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS17030 a35fd9fbdfb4987fe12b3c892241470a 85 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 69 3.9E-7 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS17030 a35fd9fbdfb4987fe12b3c892241470a 85 SUPERFAMILY SSF54928 2 80 1.76E-12 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 PANTHER PTHR13256 2 158 2.1E-35 T 23-04-2016 NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 Gene3D G3DSA:3.40.630.30 169 328 2.7E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 Gene3D G3DSA:3.40.630.30 2 167 4.3E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 SUPERFAMILY SSF55729 173 326 1.44E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 PANTHER PTHR13256:SF10 2 158 2.1E-35 T 23-04-2016 NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 Pfam PF13302 Acetyltransferase (GNAT) domain 229 324 1.6E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 Pfam PF13302 Acetyltransferase (GNAT) domain 8 151 5.2E-27 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS36790 c493b0842cc0c87e49212da3e1d4b233 340 SUPERFAMILY SSF55729 1 158 4.58E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 Gene3D G3DSA:2.60.40.1180 455 486 2.3E-5 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 SMART SM00642 16 394 1.1E-142 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 PANTHER PTHR10357:SF154 8 399 2.4E-170 T 23-04-2016 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 PANTHER PTHR10357:SF154 431 488 2.4E-170 T 23-04-2016 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 Gene3D G3DSA:3.20.20.80 179 453 9.3E-118 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 Gene3D G3DSA:3.20.20.80 6 107 9.3E-118 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 Gene3D G3DSA:3.90.400.10 108 178 1.0E-31 T 23-04-2016 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 SUPERFAMILY SSF51445 7 452 5.36E-145 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 PANTHER PTHR10357 8 399 2.4E-170 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 PANTHER PTHR10357 431 488 2.4E-170 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 SUPERFAMILY SSF51011 455 514 6.64E-7 T 23-04-2016 NIAKO_RS18380 cc7dcf8e56fa42be25cb6f6673dfee85 533 Pfam PF00128 Alpha amylase, catalytic domain 31 368 1.1E-102 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 SUPERFAMILY SSF51445 164 531 3.86E-124 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 Gene3D G3DSA:3.30.379.10 1 161 1.1E-40 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 164 518 3.0E-113 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 SUPERFAMILY SSF55545 19 163 3.4E-26 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 Pfam PF13287 Fn3 associated 565 621 1.5E-8 T 23-04-2016 IPR026876 Fn3 associated repeat NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PANTHER PTHR22600 1 224 1.2E-211 T 23-04-2016 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PANTHER PTHR22600 244 624 1.2E-211 T 23-04-2016 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PANTHER PTHR22600:SF21 1 224 1.2E-211 T 23-04-2016 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PANTHER PTHR22600:SF21 244 624 1.2E-211 T 23-04-2016 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 500 517 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 482 498 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 158 175 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 320 338 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 342 355 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 187 208 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 261 278 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 115 135 3.2E-47 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 Gene3D G3DSA:3.20.20.80 162 582 2.1E-135 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS21435 88e267347bc256249f6d54748d385d47 635 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 25 161 3.2E-25 T 23-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS30095 e5de0d2ed34f2bded7af7f8df7023aac 118 Pfam PF13806 Rieske-like [2Fe-2S] domain 26 107 2.7E-9 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NIAKO_RS30095 e5de0d2ed34f2bded7af7f8df7023aac 118 SUPERFAMILY SSF50022 22 111 1.18E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS30095 e5de0d2ed34f2bded7af7f8df7023aac 118 Gene3D G3DSA:2.102.10.10 21 111 1.7E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS30095 e5de0d2ed34f2bded7af7f8df7023aac 118 PANTHER PTHR21496 26 110 4.8E-12 T 23-04-2016 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 SUPERFAMILY SSF88659 103 179 4.49E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 176 1.3E-20 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 Gene3D G3DSA:1.10.10.10 115 176 2.5E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 PANTHER PTHR30173 1 177 1.2E-33 T 23-04-2016 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 Gene3D G3DSA:1.10.1740.10 6 112 8.5E-23 T 23-04-2016 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 Pfam PF08281 Sigma-70, region 4 123 172 2.1E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 Pfam PF04542 Sigma-70 region 2 27 94 5.0E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36555 a7966389ddfc5a156c383ed2ef5e92ad 195 SUPERFAMILY SSF88946 5 108 1.69E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36205 9c47ad7520f0acb01617971e9db1d836 332 SUPERFAMILY SSF53448 1 302 2.12E-58 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS36205 9c47ad7520f0acb01617971e9db1d836 332 PANTHER PTHR22572 2 328 8.5E-67 T 23-04-2016 NIAKO_RS36205 9c47ad7520f0acb01617971e9db1d836 332 Pfam PF00483 Nucleotidyl transferase 2 234 5.4E-29 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS36205 9c47ad7520f0acb01617971e9db1d836 332 Gene3D G3DSA:3.90.550.10 1 287 1.2E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 Gene3D G3DSA:2.60.40.1120 121 195 7.9E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 Pfam PF13715 CarboxypepD_reg-like domain 123 209 3.9E-8 T 23-04-2016 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 Pfam PF07660 Secretin and TonB N terminus short domain 65 113 2.8E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 Gene3D G3DSA:2.170.130.10 228 319 4.5E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 Pfam PF07715 TonB-dependent Receptor Plug Domain 239 318 6.8E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 SMART SM00965 64 115 2.8E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 PANTHER PTHR30069:SF1 95 717 2.0E-20 T 23-04-2016 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 PANTHER PTHR30069 95 717 2.0E-20 T 23-04-2016 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 SUPERFAMILY SSF56935 227 870 9.52E-53 T 23-04-2016 NIAKO_RS16150 0591ad97ae3445fcd36c5a8ada0c042b 873 SUPERFAMILY SSF49464 121 183 2.16E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 PANTHER PTHR14202:SF1 1 499 1.6E-163 T 23-04-2016 NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 SUPERFAMILY SSF53300 320 497 1.63E-22 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 Pfam PF05731 TROVE domain 224 315 1.0E-16 T 23-04-2016 IPR008858 TROVE domain GO:0003723 NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 Pfam PF05731 TROVE domain 13 207 1.2E-8 T 23-04-2016 IPR008858 TROVE domain GO:0003723 NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 PANTHER PTHR14202 1 499 1.6E-163 T 23-04-2016 NIAKO_RS03280 16ce3ee001138d71c3b8245748ffb1b1 509 SUPERFAMILY SSF140864 12 313 6.41E-70 T 23-04-2016 NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 Pfam PF03781 Sulfatase-modifying factor enzyme 1 51 416 1.7E-48 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 Gene3D G3DSA:3.90.1580.10 49 104 2.8E-88 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 Gene3D G3DSA:3.90.1580.10 180 423 2.8E-88 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 PANTHER PTHR23150 220 249 1.0E-47 T 23-04-2016 NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 PANTHER PTHR23150 49 136 1.0E-47 T 23-04-2016 NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 PANTHER PTHR23150 268 426 1.0E-47 T 23-04-2016 NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 SUPERFAMILY SSF56436 50 102 9.42E-67 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS33745 3b0df07c304b307b6260a829d761973b 426 SUPERFAMILY SSF56436 184 419 9.42E-67 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS32655 6e5384c29a6f852392896747988190db 379 Pfam PF00491 Arginase family 49 299 3.8E-17 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS32655 6e5384c29a6f852392896747988190db 379 SUPERFAMILY SSF52768 37 305 4.32E-44 T 23-04-2016 NIAKO_RS32655 6e5384c29a6f852392896747988190db 379 Gene3D G3DSA:3.40.800.10 22 310 1.8E-35 T 23-04-2016 IPR023696 Ureohydrolase domain NIAKO_RS25780 94065e802e448ae61470822c79404070 336 SUPERFAMILY SSF53822 62 335 3.77E-63 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS25780 94065e802e448ae61470822c79404070 336 Gene3D G3DSA:3.40.50.2300 174 335 7.9E-45 T 23-04-2016 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 SMART SM00354 3 73 6.8E-22 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 PANTHER PTHR30146 3 335 4.4E-98 T 23-04-2016 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 Gene3D G3DSA:3.40.50.2300 56 173 3.4E-42 T 23-04-2016 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 330 5.5E-31 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain NIAKO_RS25780 94065e802e448ae61470822c79404070 336 SUPERFAMILY SSF47413 3 61 8.04E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 Gene3D G3DSA:1.10.260.40 4 55 1.6E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25780 94065e802e448ae61470822c79404070 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 6.0E-12 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS07500 50d994c0a223f4c0591579d49508fb4c 270 Pfam PF08323 Starch synthase catalytic domain 6 239 6.3E-45 T 23-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS07500 50d994c0a223f4c0591579d49508fb4c 270 PANTHER PTHR12526:SF17 6 222 3.7E-15 T 23-04-2016 NIAKO_RS07500 50d994c0a223f4c0591579d49508fb4c 270 SUPERFAMILY SSF53756 6 254 5.49E-16 T 23-04-2016 NIAKO_RS07500 50d994c0a223f4c0591579d49508fb4c 270 PANTHER PTHR12526 6 222 3.7E-15 T 23-04-2016 NIAKO_RS02155 8f6f90ecc9dd12b632e8fd8fe1e6ddfa 248 PANTHER PTHR34571 5 247 1.1E-62 T 23-04-2016 NIAKO_RS02155 8f6f90ecc9dd12b632e8fd8fe1e6ddfa 248 Pfam PF07883 Cupin domain 170 236 1.5E-6 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS02155 8f6f90ecc9dd12b632e8fd8fe1e6ddfa 248 Gene3D G3DSA:2.60.120.10 5 245 7.7E-76 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02155 8f6f90ecc9dd12b632e8fd8fe1e6ddfa 248 PANTHER PTHR34571:SF1 5 247 1.1E-62 T 23-04-2016 NIAKO_RS02155 8f6f90ecc9dd12b632e8fd8fe1e6ddfa 248 SUPERFAMILY SSF51182 3 245 1.04E-52 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 Gene3D G3DSA:3.90.1150.10 252 362 8.2E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 Gene3D G3DSA:3.40.640.10 29 251 3.3E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 PANTHER PTHR11751:SF301 7 363 3.4E-118 T 23-04-2016 NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 SUPERFAMILY SSF53383 4 362 5.66E-96 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 Pfam PF00155 Aminotransferase class I and II 10 360 2.6E-56 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS31550 1940d84325012dfeda0d08e850fd5a23 363 PANTHER PTHR11751 7 363 3.4E-118 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 511 5.9E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Pfam PF13426 PAS domain 307 412 4.3E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 660 4.6E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Gene3D G3DSA:3.30.565.10 515 660 2.5E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SUPERFAMILY SSF55785 308 422 2.26E-26 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SMART SM00304 238 290 7.1E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 419 2.1E-27 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SMART SM00387 552 662 2.3E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Gene3D G3DSA:1.10.287.130 437 508 7.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PANTHER PTHR24423:SF518 106 172 6.3E-87 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PANTHER PTHR24423:SF518 295 660 6.3E-87 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SUPERFAMILY SSF158472 238 288 5.1E-8 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SMART SM00388 444 512 9.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SUPERFAMILY SSF47384 430 512 1.96E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 4.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 605 4.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 4.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PANTHER PTHR24423 106 172 6.3E-87 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 PANTHER PTHR24423 295 660 6.3E-87 T 23-04-2016 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Pfam PF00672 HAMP domain 223 287 2.2E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SMART SM00091 297 363 1.1E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 SUPERFAMILY SSF55874 502 660 2.49E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37460 fb94bfa77785adfb9abf02b97d1b5bf2 662 Gene3D G3DSA:3.30.450.20 285 411 3.8E-24 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 Pfam PF04389 Peptidase family M28 277 490 2.3E-43 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 Gene3D G3DSA:3.40.630.10 25 83 9.7E-68 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 Gene3D G3DSA:3.40.630.10 262 499 9.7E-68 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 SUPERFAMILY SSF53187 28 77 1.02E-64 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 SUPERFAMILY SSF53187 261 499 1.02E-64 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 ProSitePatterns PS00018 EF-hand calcium-binding domain. 314 326 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 PANTHER PTHR12147:SF16 230 500 3.3E-53 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 PANTHER PTHR12147:SF16 35 173 3.3E-53 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 Pfam PF02225 PA domain 135 235 4.2E-7 T 23-04-2016 IPR003137 PA domain NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 PANTHER PTHR12147 230 500 3.3E-53 T 23-04-2016 NIAKO_RS21355 bbec5878dc4c300fe18ce559b63c3126 511 PANTHER PTHR12147 35 173 3.3E-53 T 23-04-2016 NIAKO_RS02735 d2ba6c6c9ed3a7d13762c3b426da75bb 228 SUPERFAMILY SSF55961 76 216 9.5E-15 T 23-04-2016 NIAKO_RS02735 d2ba6c6c9ed3a7d13762c3b426da75bb 228 PANTHER PTHR33824:SF2 73 219 1.9E-28 T 23-04-2016 NIAKO_RS02735 d2ba6c6c9ed3a7d13762c3b426da75bb 228 Gene3D G3DSA:3.30.530.20 75 216 1.4E-6 T 23-04-2016 IPR023393 START-like domain NIAKO_RS02735 d2ba6c6c9ed3a7d13762c3b426da75bb 228 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 83 194 4.8E-9 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain NIAKO_RS02735 d2ba6c6c9ed3a7d13762c3b426da75bb 228 PANTHER PTHR33824 73 219 1.9E-28 T 23-04-2016 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 SUPERFAMILY SSF52540 582 757 4.6E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 584 723 7.8E-10 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 563 769 5.9E-38 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 Gene3D G3DSA:3.40.50.300 582 755 4.9E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 PANTHER PTHR32309 189 779 3.5E-133 T 23-04-2016 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 PANTHER PTHR32309 1 113 3.5E-133 T 23-04-2016 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 Pfam PF02706 Chain length determinant protein 19 254 2.2E-17 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 Pfam PF13807 G-rich domain on putative tyrosine kinase 440 518 3.0E-11 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 PANTHER PTHR32309:SF13 189 779 3.5E-133 T 23-04-2016 NIAKO_RS00380 57c6e2d49568fdffc0c8829629a0db5e 789 PANTHER PTHR32309:SF13 1 113 3.5E-133 T 23-04-2016 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 Gene3D G3DSA:3.20.20.80 40 371 9.7E-103 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 Gene3D G3DSA:2.60.40.1500 372 518 2.2E-19 T 23-04-2016 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PANTHER PTHR12631 36 380 1.7E-83 T 23-04-2016 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 SUPERFAMILY SSF51011 366 520 4.68E-16 T 23-04-2016 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 Pfam PF01229 Glycosyl hydrolases family 39 26 491 2.9E-116 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 SUPERFAMILY SSF51445 39 378 4.41E-83 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 307 324 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 170 186 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 106 122 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 153 170 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 232 246 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PRINTS PR00745 Glycosyl hydrolase family 39 signature 463 477 3.8E-24 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 173 182 - T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS11720 c0d11cf32278234905b78ffd7587a9e6 521 PANTHER PTHR12631:SF7 36 380 1.7E-83 T 23-04-2016 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 Gene3D G3DSA:3.20.20.140 72 402 9.6E-85 T 23-04-2016 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 SUPERFAMILY SSF51338 1 55 2.88E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 SUPERFAMILY SSF51338 364 410 2.88E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 SUPERFAMILY SSF51556 56 362 1.55E-86 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 Gene3D G3DSA:2.30.40.10 2 71 2.8E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 PANTHER PTHR11647:SF70 1 412 3.2E-128 T 23-04-2016 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 420 32.334 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 411 3.4E-102 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 Pfam PF01979 Amidohydrolase family 53 410 1.0E-8 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS12540 afd6ba408717f56365d70fd599d11c12 420 PANTHER PTHR11647 1 412 3.2E-128 T 23-04-2016 NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 72 1.3E-8 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 34 70 3.1E-7 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 SUPERFAMILY SSF69118 9 161 7.62E-34 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 Gene3D G3DSA:1.20.1290.10 84 131 5.2E-5 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 Gene3D G3DSA:1.20.1290.10 132 156 2.8E-25 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 Gene3D G3DSA:1.20.1290.10 10 70 2.8E-25 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 PANTHER PTHR35446 33 172 3.7E-19 T 23-04-2016 NIAKO_RS08255 f2e3a4e49cd5b40f2f1e8bce8d0e5531 186 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 32 152 1.2E-25 T 23-04-2016 IPR010195 Uncharacterised peroxidase-related NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 260 276 3.8E-15 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 475 490 3.8E-15 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 420 438 3.8E-15 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 3.8E-15 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 54 79 3.8E-15 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686:SF8 400 601 1.5E-101 T 23-04-2016 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686:SF8 238 376 1.5E-101 T 23-04-2016 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686:SF8 26 220 1.5E-101 T 23-04-2016 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 Pfam PF01019 Gamma-glutamyltranspeptidase 48 602 5.8E-108 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686 400 601 1.5E-101 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686 238 376 1.5E-101 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 PANTHER PTHR11686 26 220 1.5E-101 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 SUPERFAMILY SSF56235 415 612 4.82E-125 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS19325 5ac024c02fd196bcfa7eba5b3c7a986e 612 SUPERFAMILY SSF56235 22 382 4.82E-125 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 SUPERFAMILY SSF88946 3 97 2.88E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 SUPERFAMILY SSF88659 107 174 5.01E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 174 2.7E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 Gene3D G3DSA:1.10.10.10 115 175 3.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 Pfam PF08281 Sigma-70, region 4 119 169 1.7E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 PANTHER PTHR30173:SF20 2 190 1.6E-40 T 23-04-2016 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 PANTHER PTHR30173 2 190 1.6E-40 T 23-04-2016 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 Pfam PF04542 Sigma-70 region 2 20 85 6.0E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 Gene3D G3DSA:1.10.1740.10 2 106 9.0E-26 T 23-04-2016 NIAKO_RS16875 2f5506172556fd10b5fec8660025f9b4 191 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 15 174 7.3E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 Gene3D G3DSA:3.30.70.360 195 359 8.9E-59 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 Gene3D G3DSA:3.40.630.10 365 448 7.0E-68 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 Gene3D G3DSA:3.40.630.10 2 189 7.0E-68 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 PANTHER PTHR11014:SF72 282 452 2.0E-190 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 PANTHER PTHR11014:SF72 1 264 2.0E-190 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 PANTHER PTHR11014 282 452 2.0E-190 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 PANTHER PTHR11014 1 264 2.0E-190 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 Pfam PF01546 Peptidase family M20/M25/M40 82 443 3.1E-38 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 SUPERFAMILY SSF53187 2 195 8.86E-66 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 SUPERFAMILY SSF53187 366 450 8.86E-66 T 23-04-2016 NIAKO_RS34600 60a278685db5fe893ec08e8ce4069531 453 Pfam PF07687 Peptidase dimerisation domain 199 351 1.7E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS29565 0bd7776cea030388699c440ed7a64bc3 166 Gene3D G3DSA:3.40.140.10 37 146 2.5E-4 T 23-04-2016 NIAKO_RS29565 0bd7776cea030388699c440ed7a64bc3 166 Pfam PF14464 Prokaryotic homologs of the JAB domain 32 143 2.3E-11 T 23-04-2016 IPR028090 JAB domain, prokaryotic NIAKO_RS29565 0bd7776cea030388699c440ed7a64bc3 166 SUPERFAMILY SSF102712 20 138 1.31E-8 T 23-04-2016 NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 SUPERFAMILY SSF52540 4 205 6.03E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 23-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 Pfam PF02223 Thymidylate kinase 11 191 9.0E-46 T 23-04-2016 NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 Gene3D G3DSA:3.40.50.300 6 208 2.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 197 3.7E-48 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 Hamap MF_00165 Thymidylate kinase [tmk]. 7 208 22.081 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NIAKO_RS30955 dfd5907d9ad0defb76a35913c1c37df5 209 PANTHER PTHR10344 1 208 2.9E-51 T 23-04-2016 NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 SUPERFAMILY SSF52540 15 207 1.36E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 204 2.1E-60 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 Gene3D G3DSA:3.40.50.300 11 207 9.1E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 PANTHER PTHR11649 3 201 6.3E-48 T 23-04-2016 NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 5 208 24.783 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 Pfam PF01926 50S ribosome-binding GTPase 26 156 6.7E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS27265 b0c12c9dd12594eaba7ee88bdf5b00e7 217 PANTHER PTHR11649:SF49 3 201 6.3E-48 T 23-04-2016 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 SUPERFAMILY SSF46689 67 117 1.79E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 Gene3D G3DSA:1.10.10.60 66 116 1.4E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 113 8.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 82 97 8.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 Pfam PF12833 Helix-turn-helix domain 45 115 3.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 67 109 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 SMART SM00342 25 113 3.4E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS01185 ac54e2593176e3135b2553287c96f542 122 PANTHER PTHR11019 11 121 2.4E-22 T 23-04-2016 NIAKO_RS31230 0d30333468ea42f147207673bcf81418 468 PANTHER PTHR30365 1 456 6.9E-203 T 23-04-2016 NIAKO_RS31230 0d30333468ea42f147207673bcf81418 468 PIRSF PIRSF006446 1 458 6.1E-166 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NIAKO_RS31230 0d30333468ea42f147207673bcf81418 468 PANTHER PTHR30365:SF0 1 456 6.9E-203 T 23-04-2016 NIAKO_RS31230 0d30333468ea42f147207673bcf81418 468 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 437 3.0E-159 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 SUPERFAMILY SSF51338 401 434 7.92E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 SUPERFAMILY SSF51338 33 98 7.92E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 PANTHER PTHR11271:SF39 543 988 5.4E-42 T 23-04-2016 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 SUPERFAMILY SSF51338 557 628 3.35E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 PANTHER PTHR11271 543 988 5.4E-42 T 23-04-2016 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 SUPERFAMILY SSF51338 927 968 3.35E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Gene3D G3DSA:2.30.40.10 361 417 7.9E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Gene3D G3DSA:2.30.40.10 45 111 4.5E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Gene3D G3DSA:2.30.40.10 570 677 5.5E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Gene3D G3DSA:2.30.40.10 867 964 4.8E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 SUPERFAMILY SSF51556 627 928 4.34E-24 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Pfam PF01979 Amidohydrolase family 624 953 2.4E-14 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS00770 e2319a0a322edc870bc2facba24630a3 1028 Pfam PF01979 Amidohydrolase family 363 431 6.3E-7 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 SUPERFAMILY SSF46689 265 312 1.7E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 Gene3D G3DSA:1.10.10.60 265 311 2.8E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 PANTHER PTHR11019:SF80 67 317 1.7E-35 T 23-04-2016 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 Pfam PF12833 Helix-turn-helix domain 232 310 3.3E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 SMART SM00342 226 309 1.0E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08040 8e51b1c5b4952633cbc1e6317d6040d7 318 PANTHER PTHR11019 67 317 1.7E-35 T 23-04-2016 NIAKO_RS18100 1615ec699fa4f38b6d403c2e5d915211 458 Gene3D G3DSA:3.40.50.150 253 375 7.8E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18100 1615ec699fa4f38b6d403c2e5d915211 458 SUPERFAMILY SSF53335 253 375 1.08E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 SUPERFAMILY SSF52733 3 351 3.01E-109 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 Gene3D G3DSA:3.40.50.10210 54 332 9.4E-102 T 23-04-2016 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 350 2.3E-123 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 Pfam PF02277 Phosphoribosyltransferase 3 350 5.8E-124 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 Gene3D G3DSA:1.10.1610.10 3 53 3.6E-24 T 23-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 2 352 31.163 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 PANTHER PTHR21712:SF4 1 356 2.7E-103 T 23-04-2016 NIAKO_RS33660 41c4c48997797c8535f29f0333b94e12 357 PANTHER PTHR21712 1 356 2.7E-103 T 23-04-2016 NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 PANTHER PTHR24220 7 249 3.1E-124 T 23-04-2016 NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 SUPERFAMILY SSF52540 5 234 1.29E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 SMART SM00382 34 223 8.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 PANTHER PTHR24220:SF578 7 249 3.1E-124 T 23-04-2016 NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 Pfam PF00005 ABC transporter 25 174 2.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS33010 3dddaff3c279361d72f1d5a8455872fd 249 Gene3D G3DSA:3.40.50.300 2 238 9.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 SMART SM01329 4 346 2.9E-181 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 SUPERFAMILY SSF53659 2 344 7.49E-119 T 23-04-2016 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 PANTHER PTHR11835:SF35 2 358 1.6E-178 T 23-04-2016 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 332 5.3E-135 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 350 44.191 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 PANTHER PTHR11835 2 358 1.6E-178 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 Gene3D G3DSA:3.40.718.10 1 332 2.2E-125 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS00485 17f58cf52d8b7a367fbb4306ec5be6ef 371 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 345 1.5E-125 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 PANTHER PTHR15004:SF0 1 94 4.1E-33 T 23-04-2016 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 1.8E-29 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.599 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 SUPERFAMILY SSF141000 3 93 3.27E-30 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 8.6E-23 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NIAKO_RS26925 5141f2d7cba83ec618c6929bd4c5b02b 98 PANTHER PTHR15004 1 94 4.1E-33 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PRINTS PR00132 Glycosyl hydrolase family 2 signature 408 423 2.1E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PRINTS PR00132 Glycosyl hydrolase family 2 signature 113 128 2.1E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PRINTS PR00132 Glycosyl hydrolase family 2 signature 338 356 2.1E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PRINTS PR00132 Glycosyl hydrolase family 2 signature 307 321 2.1E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Gene3D G3DSA:2.60.120.260 19 173 1.1E-40 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 SUPERFAMILY SSF51445 292 589 6.34E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Pfam PF16355 Domain of unknown function (DUF4982) 628 687 5.2E-18 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Pfam PF00703 Glycosyl hydrolases family 2 192 295 3.5E-16 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Gene3D G3DSA:2.60.40.1560 620 701 8.0E-22 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 304 457 1.1E-27 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 33 181 1.7E-23 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Gene3D G3DSA:2.60.40.320 174 296 1.1E-27 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 SUPERFAMILY SSF49785 26 197 1.34E-43 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Gene3D G3DSA:2.60.40.920 702 805 3.4E-4 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PANTHER PTHR10066 559 652 2.9E-175 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PANTHER PTHR10066 10 542 2.9E-175 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PANTHER PTHR10066:SF71 559 652 2.9E-175 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 PANTHER PTHR10066:SF71 10 542 2.9E-175 T 23-04-2016 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 SUPERFAMILY SSF49303 190 295 1.81E-15 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS11765 1174d59f1783bd21416b7e8c805a57db 813 Gene3D G3DSA:3.20.20.80 299 592 1.4E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 Pfam PF00092 von Willebrand factor type A domain 196 357 9.0E-23 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 Pfam PF12450 von Willebrand factor 87 179 1.6E-41 T 23-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 Pfam PF12034 Domain of unknown function (DUF3520) 372 556 2.8E-78 T 23-04-2016 IPR021908 Protein of unknown function DUF3520 NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 SUPERFAMILY SSF53300 165 365 3.01E-37 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 Gene3D G3DSA:3.40.50.410 194 367 1.2E-26 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 SMART SM00327 194 369 1.2E-27 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 PANTHER PTHR10166 193 468 4.0E-117 T 23-04-2016 NIAKO_RS10110 22a67652170e579bb593366f0d321bbb 561 PANTHER PTHR10166:SF15 193 468 4.0E-117 T 23-04-2016 NIAKO_RS03740 1aba682cbebe12973ecb4644b45238f6 550 Pfam PF07980 SusD family 311 548 4.6E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS03740 1aba682cbebe12973ecb4644b45238f6 550 Pfam PF14322 Starch-binding associating with outer membrane 21 222 1.8E-19 T 23-04-2016 NIAKO_RS03740 1aba682cbebe12973ecb4644b45238f6 550 Gene3D G3DSA:1.25.40.10 393 486 3.4E-39 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03740 1aba682cbebe12973ecb4644b45238f6 550 Gene3D G3DSA:1.25.40.10 204 320 3.4E-39 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03740 1aba682cbebe12973ecb4644b45238f6 550 SUPERFAMILY SSF48452 16 548 6.95E-105 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22210 d7ff5402864c6d9d4c1448af307a86f2 293 SUPERFAMILY SSF56281 7 269 2.09E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS22210 d7ff5402864c6d9d4c1448af307a86f2 293 Gene3D G3DSA:3.60.15.10 5 265 3.5E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS22210 d7ff5402864c6d9d4c1448af307a86f2 293 PANTHER PTHR12553 20 272 2.0E-26 T 23-04-2016 NIAKO_RS22210 d7ff5402864c6d9d4c1448af307a86f2 293 Pfam PF12706 Beta-lactamase superfamily domain 23 246 3.0E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS22210 d7ff5402864c6d9d4c1448af307a86f2 293 PANTHER PTHR12553:SF51 20 272 2.0E-26 T 23-04-2016 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 ProSitePatterns PS00761 Signal peptidases I signature 3. 478 491 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 Gene3D G3DSA:2.10.109.10 292 308 5.1E-49 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 Gene3D G3DSA:2.10.109.10 143 229 5.1E-49 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 Gene3D G3DSA:2.10.109.10 473 519 5.1E-49 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 473 492 1.7E-9 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 147 163 1.7E-9 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 SUPERFAMILY SSF51306 448 525 2.2E-22 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383 215 229 2.2E-49 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383 127 179 2.2E-49 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383 296 331 2.2E-49 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383 455 515 2.2E-49 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 Pfam PF00717 Peptidase S24-like 153 239 5.2E-7 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383:SF14 215 229 2.2E-49 T 23-04-2016 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383:SF14 127 179 2.2E-49 T 23-04-2016 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383:SF14 296 331 2.2E-49 T 23-04-2016 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 PANTHER PTHR12383:SF14 455 515 2.2E-49 T 23-04-2016 NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 SUPERFAMILY SSF51306 145 230 5.75E-29 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS07870 465eff00124fdba74e41fbbb0c9c0265 527 SUPERFAMILY SSF51306 293 338 5.75E-29 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 270 3.4E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.60.40.1120 64 146 7.9E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Pfam PF00593 TonB dependent receptor 651 904 7.8E-17 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 246 276 1.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Pfam PF13715 CarboxypepD_reg-like domain 64 144 9.6E-15 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.40.170.20 272 303 4.7E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.40.170.20 358 422 4.7E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.40.170.20 882 907 4.7E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.40.170.20 454 826 4.7E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.40.170.20 943 1043 4.7E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF49464 62 142 4.71E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532:SF57 606 1044 1.5E-187 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532:SF57 495 573 1.5E-187 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532:SF57 30 403 1.5E-187 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF56935 872 917 4.4E-91 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF56935 138 294 4.4E-91 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF56935 473 816 4.4E-91 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF56935 349 437 4.4E-91 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 SUPERFAMILY SSF56935 954 1008 4.4E-91 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 64 1046 3.9E-213 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 Gene3D G3DSA:2.170.130.10 147 271 2.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532 606 1044 1.5E-187 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532 495 573 1.5E-187 T 23-04-2016 NIAKO_RS18590 c5e4ea50d60c16ea9db3dde7306bcae1 1046 PANTHER PTHR11532 30 403 1.5E-187 T 23-04-2016 NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 SUPERFAMILY SSF48208 298 679 5.95E-46 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 Pfam PF05592 Bacterial alpha-L-rhamnosidase 202 673 9.7E-49 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 PANTHER PTHR34987:SF1 33 672 2.1E-153 T 23-04-2016 NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 Gene3D G3DSA:2.60.120.260 32 188 3.3E-62 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 PANTHER PTHR34987 33 672 2.1E-153 T 23-04-2016 NIAKO_RS17670 9ce80f26a796da13abecdefb4696ff79 728 Gene3D G3DSA:2.60.120.260 191 296 1.4E-31 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 PRINTS PR00344 Bacterial sensor protein C-terminal signature 204 218 6.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 PRINTS PR00344 Bacterial sensor protein C-terminal signature 223 241 6.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 PRINTS PR00344 Bacterial sensor protein C-terminal signature 247 260 6.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 Pfam PF07730 Histidine kinase 71 126 3.1E-9 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 PANTHER PTHR24421 1 260 3.8E-35 T 23-04-2016 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 SUPERFAMILY SSF55874 159 260 1.57E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 Gene3D G3DSA:3.30.565.10 139 261 7.8E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 PANTHER PTHR24421:SF1 1 260 3.8E-35 T 23-04-2016 NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 SMART SM00387 168 262 3.0E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05215 752642aa49f27910d2886f9d85f5188f 262 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 170 259 4.5E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 Gene3D G3DSA:2.40.50.100 60 90 2.0E-19 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 Gene3D G3DSA:2.40.50.100 235 268 2.0E-19 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 SUPERFAMILY SSF111369 58 146 5.49E-11 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 PANTHER PTHR30386 14 367 2.6E-89 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 187 314 3.4E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 281 305 6.17E-7 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 367 6.17E-7 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 6.17E-7 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 SUPERFAMILY SSF111369 190 288 1.23E-12 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 Pfam PF13533 Biotin-lipoyl like 61 104 1.2E-13 T 23-04-2016 NIAKO_RS07840 d88c5142c26dd553f2601ac1da0169b0 367 PANTHER PTHR30386:SF7 14 367 2.6E-89 T 23-04-2016 NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 Pfam PF13650 Aspartyl protease 171 266 7.9E-13 T 23-04-2016 NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 SUPERFAMILY SSF50630 303 406 3.53E-5 T 23-04-2016 IPR021109 Aspartic peptidase domain NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 SUPERFAMILY SSF50630 177 272 2.68E-7 T 23-04-2016 IPR021109 Aspartic peptidase domain NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 315 326 - T 23-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 182 193 - T 23-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 NIAKO_RS10185 09e145dbd7798b0fc8a4467a10fa8e8f 422 Gene3D G3DSA:2.40.70.10 179 265 4.1E-4 T 23-04-2016 IPR021109 Aspartic peptidase domain NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Pfam PF00027 Cyclic nucleotide-binding domain 167 252 2.4E-19 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 SUPERFAMILY SSF46785 284 351 2.15E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 SMART SM00100 147 268 9.1E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 SUPERFAMILY SSF51206 158 280 1.83E-28 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 SMART SM00448 2 115 7.6E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Pfam PF13545 Crp-like helix-turn-helix domain 286 351 2.6E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Gene3D G3DSA:3.40.50.2300 2 127 7.9E-33 T 23-04-2016 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Gene3D G3DSA:1.10.10.10 284 351 9.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 PANTHER PTHR26402 2 133 4.9E-34 T 23-04-2016 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 PANTHER PTHR26402 321 349 4.9E-34 T 23-04-2016 NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 SUPERFAMILY SSF52172 1 132 4.41E-34 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS17240 ff493fd489de524bb558e7d04f04f4bd 353 Gene3D G3DSA:2.60.120.10 159 276 1.2E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 Gene3D G3DSA:1.10.10.60 257 303 3.5E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 Pfam PF12833 Helix-turn-helix domain 225 302 3.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 SMART SM00342 218 301 3.2E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 PANTHER PTHR11019 26 304 3.8E-35 T 23-04-2016 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 SUPERFAMILY SSF46689 257 304 3.14E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 3.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 3.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02470 13ad096cb69978197b6e2d89acb0c2dd 306 PANTHER PTHR11019:SF50 26 304 3.8E-35 T 23-04-2016 NIAKO_RS37195 7e4e8fe3cfd2d2b53391a5295f68b4df 319 SUPERFAMILY SSF55729 21 127 2.06E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS37195 7e4e8fe3cfd2d2b53391a5295f68b4df 319 Gene3D G3DSA:3.40.630.30 21 122 1.3E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS37195 7e4e8fe3cfd2d2b53391a5295f68b4df 319 Pfam PF13527 Acetyltransferase (GNAT) domain 21 118 1.4E-18 T 23-04-2016 NIAKO_RS33605 f17c2c7ffe2edf0dce9c2993b35f202c 85 Pfam PF16912 Glucose dehydrogenase C-terminus 7 83 3.1E-16 T 23-04-2016 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 34 1042 6.0E-230 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 Gene3D G3DSA:2.170.130.10 137 240 2.7E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532 436 469 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532 528 1041 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532 18 371 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 SUPERFAMILY SSF56935 880 941 1.24E-64 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 SUPERFAMILY SSF56935 435 800 1.24E-64 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 SUPERFAMILY SSF56935 326 395 1.24E-64 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 SUPERFAMILY SSF56935 114 264 1.24E-64 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 231 2.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 Gene3D G3DSA:2.60.40.1120 35 126 1.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 SUPERFAMILY SSF49464 35 114 3.14E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 Pfam PF13715 CarboxypepD_reg-like domain 36 116 2.2E-13 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532:SF57 436 469 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532:SF57 528 1041 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 PANTHER PTHR11532:SF57 18 371 1.4E-220 T 23-04-2016 NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 ProSitePatterns PS00018 EF-hand calcium-binding domain. 857 869 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS25825 2a52c8373d2d25fdcff0ba95ee75a2be 1043 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 207 237 2.7E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 PANTHER PTHR10963 24 253 7.6E-53 T 23-04-2016 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 Pfam PF03422 Carbohydrate binding module (family 6) 356 475 6.2E-32 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 Gene3D G3DSA:2.60.20.10 262 347 1.7E-29 T 23-04-2016 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 Gene3D G3DSA:2.60.120.200 20 253 8.9E-74 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 SMART SM00606 348 476 2.8E-40 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 SMART SM00247 262 346 0.009 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 SUPERFAMILY SSF49785 353 476 2.13E-36 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 SUPERFAMILY SSF49695 263 346 1.09E-18 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 Pfam PF00722 Glycosyl hydrolases family 16 61 250 3.0E-29 T 23-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 Gene3D G3DSA:2.60.120.260 354 476 1.6E-37 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03775 33858f08a0d06df06bb43431033ea644 478 SUPERFAMILY SSF49899 22 253 1.98E-69 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS05880 9237e30c83cf411437bcc85f03017ed2 274 Pfam PF08241 Methyltransferase domain 44 140 1.1E-19 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS05880 9237e30c83cf411437bcc85f03017ed2 274 Gene3D G3DSA:3.40.50.150 31 270 8.4E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05880 9237e30c83cf411437bcc85f03017ed2 274 SUPERFAMILY SSF53335 13 201 3.92E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS05880 9237e30c83cf411437bcc85f03017ed2 274 PANTHER PTHR10108 19 158 7.7E-26 T 23-04-2016 NIAKO_RS11415 adc3125b8ffa0353c80bef29417da472 189 SUPERFAMILY SSF51206 17 145 1.06E-21 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS11415 adc3125b8ffa0353c80bef29417da472 189 PANTHER PTHR24567 15 186 6.9E-17 T 23-04-2016 NIAKO_RS11415 adc3125b8ffa0353c80bef29417da472 189 Pfam PF00027 Cyclic nucleotide-binding domain 32 111 1.2E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS11415 adc3125b8ffa0353c80bef29417da472 189 Gene3D G3DSA:2.60.120.10 5 156 1.6E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SUPERFAMILY SSF49899 24 187 6.76E-22 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 32 182 7.1E-15 T 23-04-2016 NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SUPERFAMILY SSF49299 2404 2516 6.2E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Gene3D G3DSA:2.60.40.670 612 656 1.6E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Gene3D G3DSA:2.60.40.670 1754 1826 4.3E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Gene3D G3DSA:2.60.40.670 2441 2518 3.7E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Gene3D G3DSA:2.60.40.670 1562 1605 6.1E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Gene3D G3DSA:2.60.120.200 24 187 3.8E-14 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 Pfam PF13585 C-terminal domain of CHU protein family 2906 2986 8.1E-19 T 23-04-2016 NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 2906 2990 1.1E-14 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SUPERFAMILY SSF49299 1713 1824 4.32E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SMART SM00089 1748 1825 1.9E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SMART SM00089 2743 2820 2.6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS14840 0c54eef77a92825e91925f81e3c7d9f4 2992 SMART SM00089 2439 2516 5.2E-6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 Gene3D G3DSA:3.40.50.300 2 220 6.9E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 SMART SM00487 20 219 1.8E-56 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 SMART SM00490 258 339 7.0E-31 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 SUPERFAMILY SSF52540 73 356 1.44E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 Pfam PF00271 Helicase conserved C-terminal domain 236 339 1.4E-29 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 PANTHER PTHR24031 1 377 1.7E-158 T 23-04-2016 NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 Gene3D G3DSA:3.40.50.300 221 371 4.8E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06155 f16a4039b079db1dc24cbc15e02113f2 380 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.2E-46 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS05775 5e6f1bb41b5cf146d36b087d71e599a8 149 SUPERFAMILY SSF117070 26 147 6.28E-13 T 23-04-2016 NIAKO_RS05775 5e6f1bb41b5cf146d36b087d71e599a8 149 Gene3D G3DSA:2.60.40.10 33 141 1.3E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS05775 5e6f1bb41b5cf146d36b087d71e599a8 149 Pfam PF03168 Late embryogenesis abundant protein 49 138 5.8E-10 T 23-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 NIAKO_RS05775 5e6f1bb41b5cf146d36b087d71e599a8 149 SMART SM00769 26 145 2.0E-4 T 23-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 NIAKO_RS31980 32db14d531da892bb5ba77a0c4fe2344 135 Pfam PF10008 Uncharacterized protein conserved in bacteria (DUF2251) 24 112 8.5E-38 T 23-04-2016 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 PANTHER PTHR11562:SF17 3 306 5.5E-89 T 23-04-2016 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 Gene3D G3DSA:1.20.1510.10 24 213 1.4E-52 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 Pfam PF01545 Cation efflux family 27 213 4.5E-39 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 SUPERFAMILY SSF160240 221 296 4.19E-7 T 23-04-2016 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 PANTHER PTHR11562 3 306 5.5E-89 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 SUPERFAMILY SSF161111 22 217 5.23E-52 T 23-04-2016 NIAKO_RS00920 4f3e6904de478cc54562426a23725912 317 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 297 1.8E-73 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PANTHER PTHR24322 11 137 3.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PANTHER PTHR24322 153 185 3.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 Gene3D G3DSA:3.40.50.720 6 230 1.8E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.6E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.6E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 SUPERFAMILY SSF51735 4 249 4.03E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PANTHER PTHR24322:SF338 11 137 3.4E-51 T 23-04-2016 NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 PANTHER PTHR24322:SF338 153 185 3.4E-51 T 23-04-2016 NIAKO_RS31050 446a768e79fc7ce760ab4f7601d9d96c 266 Pfam PF00106 short chain dehydrogenase 7 195 1.6E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 PANTHER PTHR11019:SF45 1 121 3.2E-18 T 23-04-2016 NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 Gene3D G3DSA:1.10.10.60 78 123 6.1E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 SUPERFAMILY SSF46689 78 123 7.62E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 PANTHER PTHR11019 1 121 3.2E-18 T 23-04-2016 NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 SMART SM00342 39 121 9.4E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14505 ca3db4be5db484d3a194faba6c583eb9 124 Pfam PF12833 Helix-turn-helix domain 46 122 9.6E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS09685 3e90d2f505a8c710a786515e958888e6 678 Pfam PF16216 GxGYxY sequence motif in domain of unknown function N-terminal 201 416 4.8E-55 T 23-04-2016 IPR032626 GxGYxYP putative glycoside hydrolase, N-terminal NIAKO_RS09685 3e90d2f505a8c710a786515e958888e6 678 PANTHER PTHR37321:SF1 74 672 4.2E-33 T 23-04-2016 NIAKO_RS09685 3e90d2f505a8c710a786515e958888e6 678 Pfam PF14323 GxGYxYP putative glycoside hydrolase C-terminal domain 434 656 6.2E-66 T 23-04-2016 IPR025832 GxGYxYP putative glycoside hydrolase, C-terminal NIAKO_RS09685 3e90d2f505a8c710a786515e958888e6 678 PANTHER PTHR37321 74 672 4.2E-33 T 23-04-2016 NIAKO_RS06685 731cc5442b37dcc363a5bf4e030568c7 498 SUPERFAMILY SSF52266 113 215 2.29E-65 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS06685 731cc5442b37dcc363a5bf4e030568c7 498 SUPERFAMILY SSF52266 255 440 2.29E-65 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS06685 731cc5442b37dcc363a5bf4e030568c7 498 PANTHER PTHR22901:SF0 1 494 2.5E-127 T 23-04-2016 NIAKO_RS06685 731cc5442b37dcc363a5bf4e030568c7 498 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 114 379 5.6E-83 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS06685 731cc5442b37dcc363a5bf4e030568c7 498 PANTHER PTHR22901 1 494 2.5E-127 T 23-04-2016 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 Gene3D G3DSA:3.30.70.660 106 240 2.9E-31 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 236 1.9E-42 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 Gene3D G3DSA:3.30.70.580 1 104 1.4E-29 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 PANTHER PTHR11142:SF0 1 251 1.5E-60 T 23-04-2016 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 SUPERFAMILY SSF55120 1 249 2.3E-64 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 241 27.249 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 PIRSF PIRSF001430 1 254 8.4E-65 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 Pfam PF01416 tRNA pseudouridine synthase 147 242 6.4E-16 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS25245 2559889b528a50d193a875effb8db5d6 255 PANTHER PTHR11142 1 251 1.5E-60 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 SMART SM00327 230 407 5.7E-21 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 PANTHER PTHR10166:SF15 229 469 5.5E-76 T 23-04-2016 NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 SUPERFAMILY SSF53300 228 402 2.88E-33 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 Pfam PF12450 von Willebrand factor 124 214 1.0E-29 T 23-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 PANTHER PTHR10166 229 469 5.5E-76 T 23-04-2016 NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 Pfam PF00092 von Willebrand factor type A domain 232 400 2.6E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 Gene3D G3DSA:3.40.50.410 229 404 1.1E-21 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27080 b53d6daab1d78e391e6b99ad467fe8e0 586 Pfam PF12034 Domain of unknown function (DUF3520) 409 574 1.2E-39 T 23-04-2016 IPR021908 Protein of unknown function DUF3520 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Gene3D G3DSA:3.30.413.10 142 339 1.8E-58 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Gene3D G3DSA:3.30.413.10 432 556 8.0E-32 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 167 330 3.6E-43 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 432 509 0.015 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 SUPERFAMILY SSF55124 346 420 3.11E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 5.7E-9 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 5.7E-9 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 SUPERFAMILY SSF56014 430 557 7.33E-32 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Gene3D G3DSA:3.90.480.10 71 139 7.8E-48 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Gene3D G3DSA:3.90.480.10 342 420 7.8E-48 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 PANTHER PTHR11493:SF47 5 556 3.3E-220 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 SUPERFAMILY SSF56014 142 344 9.42E-49 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 349 415 2.8E-11 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 74 130 2.1E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 PANTHER PTHR11493 5 556 3.3E-220 T 23-04-2016 NIAKO_RS34370 3f32d83d9e3eff4f648c626576f56988 562 SUPERFAMILY SSF55124 8 141 3.93E-26 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 Pfam PF13692 Glycosyl transferases group 1 275 409 8.5E-9 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 SUPERFAMILY SSF53756 1 242 4.97E-28 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 SUPERFAMILY SSF53756 274 412 4.97E-28 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 PANTHER PTHR12526 2 43 8.2E-14 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 PANTHER PTHR12526 75 259 8.2E-14 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 PANTHER PTHR12526 278 442 8.2E-14 T 23-04-2016 NIAKO_RS33320 eb580357693a7a076694bd3f7b991208 443 Pfam PF13439 Glycosyltransferase Family 4 24 215 5.0E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS23740 75a1dcbe61b00c32cdbaf8dc93079aa4 136 PANTHER PTHR26402 4 118 1.1E-19 T 23-04-2016 NIAKO_RS23740 75a1dcbe61b00c32cdbaf8dc93079aa4 136 Gene3D G3DSA:3.40.50.2300 4 130 1.3E-23 T 23-04-2016 NIAKO_RS23740 75a1dcbe61b00c32cdbaf8dc93079aa4 136 SMART SM00448 4 122 1.5E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23740 75a1dcbe61b00c32cdbaf8dc93079aa4 136 Pfam PF00072 Response regulator receiver domain 6 122 4.4E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23740 75a1dcbe61b00c32cdbaf8dc93079aa4 136 SUPERFAMILY SSF52172 1 127 3.56E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 Gene3D G3DSA:3.40.50.720 1 143 8.7E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 119 2.9E-26 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 SUPERFAMILY SSF55347 130 295 3.76E-37 T 23-04-2016 NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 199 1.2E-4 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 PANTHER PTHR22604 1 317 1.4E-84 T 23-04-2016 NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 Gene3D G3DSA:3.30.360.10 144 319 2.3E-36 T 23-04-2016 NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 SUPERFAMILY SSF51735 3 158 2.68E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23530 c26fec05f8d957b4b7497632930fca40 325 PANTHER PTHR22604:SF105 1 317 1.4E-84 T 23-04-2016 NIAKO_RS21585 227518ec4f52289f2852ceccdbe664a7 538 Pfam PF14322 Starch-binding associating with outer membrane 93 215 3.3E-17 T 23-04-2016 NIAKO_RS21585 227518ec4f52289f2852ceccdbe664a7 538 Gene3D G3DSA:1.25.40.10 217 349 5.9E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21585 227518ec4f52289f2852ceccdbe664a7 538 Gene3D G3DSA:1.25.40.10 391 476 5.9E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21585 227518ec4f52289f2852ceccdbe664a7 538 Pfam PF07980 SusD family 289 538 7.8E-31 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS21585 227518ec4f52289f2852ceccdbe664a7 538 SUPERFAMILY SSF48452 19 538 1.9E-92 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 Gene3D G3DSA:3.50.50.60 7 71 3.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 Gene3D G3DSA:3.50.50.60 116 200 3.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 Gene3D G3DSA:3.50.50.60 291 371 3.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PANTHER PTHR13789 2 361 2.6E-70 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PANTHER PTHR13789:SF219 2 361 2.6E-70 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 354 4.0E-37 T 23-04-2016 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 Pfam PF01494 FAD binding domain 6 367 4.1E-89 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 SUPERFAMILY SSF51905 290 373 6.71E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01125 3fc91ac36c5b7af5af20615170626337 547 SUPERFAMILY SSF51905 7 195 6.71E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 218 5.8E-44 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 Gene3D G3DSA:2.40.100.10 170 221 9.6E-51 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 Gene3D G3DSA:2.40.100.10 18 137 9.6E-51 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 PANTHER PTHR11071 171 223 3.8E-37 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 PANTHER PTHR11071 29 138 3.8E-37 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 PANTHER PTHR11071:SF78 171 223 3.8E-37 T 23-04-2016 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 PANTHER PTHR11071:SF78 29 138 3.8E-37 T 23-04-2016 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 SUPERFAMILY SSF50891 170 219 5.11E-42 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS28315 a240d5e8d2c21ede527914bbc52baf64 223 SUPERFAMILY SSF50891 9 137 5.11E-42 T 23-04-2016 IPR029000 Cyclophilin-like domain NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 Gene3D G3DSA:1.10.10.60 165 212 1.5E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 Pfam PF12833 Helix-turn-helix domain 185 259 1.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 Gene3D G3DSA:1.10.10.60 213 257 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 SMART SM00342 176 259 3.9E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 SUPERFAMILY SSF46689 166 210 2.2E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 SUPERFAMILY SSF46689 213 258 3.23E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 PANTHER PTHR11019:SF50 164 267 3.2E-16 T 23-04-2016 NIAKO_RS11120 e0692b4bcf4a5207854a2bd59df4d262 267 PANTHER PTHR11019 164 267 3.2E-16 T 23-04-2016 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 Gene3D G3DSA:2.70.98.50 27 425 8.8E-141 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 27 280 5.0E-70 T 23-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 PIRSF PIRSF007663 5 816 1.1E-270 T 23-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 SUPERFAMILY SSF48208 295 775 1.6E-84 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 PANTHER PTHR31084:SF0 12 803 6.8E-300 T 23-04-2016 NIAKO_RS11905 cf934b3a11373347edc159e628f6ba95 822 PANTHER PTHR31084 12 803 6.8E-300 T 23-04-2016 NIAKO_RS21045 de94c417182cf3d2076c5519aed09df6 86 PANTHER PTHR10412 10 82 3.7E-17 T 23-04-2016 IPR004888 Glycoside hydrolase family 63 GO:0004573|GO:0009311 NIAKO_RS21045 de94c417182cf3d2076c5519aed09df6 86 PANTHER PTHR10412:SF10 10 82 3.7E-17 T 23-04-2016 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 Gene3D G3DSA:3.30.540.10 6 146 5.8E-46 T 23-04-2016 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 SUPERFAMILY SSF56655 5 255 4.32E-80 T 23-04-2016 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PANTHER PTHR20854 9 256 3.6E-88 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 7.7E-48 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 Gene3D G3DSA:3.40.190.80 147 256 8.2E-37 T 23-04-2016 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 78 91 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 PANTHER PTHR20854:SF4 9 256 3.6E-88 T 23-04-2016 NIAKO_RS31105 d9a53317bae8bb058abb4d008c5351ce 258 Pfam PF00459 Inositol monophosphatase family 9 254 1.6E-68 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 Gene3D G3DSA:3.40.50.720 39 181 8.5E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 42 165 8.3E-28 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 SUPERFAMILY SSF55347 171 333 1.16E-24 T 23-04-2016 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PANTHER PTHR22604:SF125 1 371 2.1E-105 T 23-04-2016 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 SUPERFAMILY SSF51735 36 193 4.15E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PANTHER PTHR22604 1 371 2.1E-105 T 23-04-2016 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 Gene3D G3DSA:3.30.360.10 182 370 1.3E-40 T 23-04-2016 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 337 353 6.8E-17 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 155 169 6.8E-17 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 93 109 6.8E-17 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 40 53 6.8E-17 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS08925 7df9ae84bf40064a499f9b80ff91a065 371 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 288 303 6.8E-17 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 NIAKO_RS36290 a17a35bb361dd9266e5001e0ba1efa54 355 PANTHER PTHR34220:SF1 12 354 2.3E-48 T 23-04-2016 NIAKO_RS36290 a17a35bb361dd9266e5001e0ba1efa54 355 Pfam PF06580 Histidine kinase 169 245 8.1E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36290 a17a35bb361dd9266e5001e0ba1efa54 355 PANTHER PTHR34220 12 354 2.3E-48 T 23-04-2016 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 PANTHER PTHR30055:SF56 1 195 1.0E-29 T 23-04-2016 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 Gene3D G3DSA:1.10.357.10 59 197 3.8E-28 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 PANTHER PTHR30055 1 195 1.0E-29 T 23-04-2016 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 Gene3D G3DSA:1.10.10.60 5 58 3.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.4E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.4E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 SUPERFAMILY SSF48498 84 197 2.2E-19 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.0E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS29795 76c958da60179548f62fbcd29a412aa0 199 SUPERFAMILY SSF46689 4 80 1.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 335 391 8.1E-14 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 91 141 6.8E-14 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 146 199 7.1E-19 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 227 266 1.6E-8 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 272 327 2.2E-16 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 37 86 1.3E-14 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 227 255 0.0043 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 343 381 1.7E-6 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 154 189 1.1E-8 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 48 77 2.1E-5 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 98 131 7.7E-9 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 280 318 1.1E-6 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 539 616 4.0E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS04010 da7086cf63a7ac6dec785774eff203b5 616 Gene3D G3DSA:2.90.10.10 272 352 9.8E-4 T 23-04-2016 IPR001480 Bulb-type lectin domain NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 PANTHER PTHR30026 7 448 8.9E-30 T 23-04-2016 NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 SUPERFAMILY SSF56954 112 448 5.75E-59 T 23-04-2016 NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 SUPERFAMILY SSF56954 5 80 5.75E-59 T 23-04-2016 NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 Gene3D G3DSA:1.20.1600.10 23 448 7.8E-55 T 23-04-2016 NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 Pfam PF02321 Outer membrane efflux protein 29 238 5.1E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS27155 ec033c192225a0114fa505db1dc90174 453 Pfam PF02321 Outer membrane efflux protein 292 448 3.0E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SUPERFAMILY SSF49464 802 872 2.09E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 Pfam PF02010 REJ domain 965 1111 3.8E-9 T 23-04-2016 IPR002859 PKD/REJ-like domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SUPERFAMILY SSF49299 922 1016 1.37E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SUPERFAMILY SSF49299 1019 1110 3.14E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 PANTHER PTHR10083:SF217 925 1210 3.2E-57 T 23-04-2016 NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 Gene3D G3DSA:2.60.40.670 1116 1207 1.9E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 Gene3D G3DSA:2.60.40.670 1020 1112 6.5E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SUPERFAMILY SSF49299 1115 1209 7.85E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 Gene3D G3DSA:2.60.40.1120 802 865 2.8E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SMART SM00089 926 1015 0.0011 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SMART SM00089 1023 1113 9.0E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 SMART SM00089 1119 1208 5.9E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 PANTHER PTHR10083 925 1210 3.2E-57 T 23-04-2016 NIAKO_RS02325 0be5aa3de77c753d0c6cfadd62e698e2 1407 Pfam PF13715 CarboxypepD_reg-like domain 802 877 1.4E-10 T 23-04-2016 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 Gene3D G3DSA:1.10.10.10 129 190 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 Pfam PF04542 Sigma-70 region 2 32 99 7.4E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 Pfam PF08281 Sigma-70, region 4 133 183 1.3E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 Gene3D G3DSA:1.10.1740.10 9 110 5.1E-19 T 23-04-2016 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 189 4.4E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 SUPERFAMILY SSF88659 133 188 5.05E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 SUPERFAMILY SSF88946 8 105 6.67E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16930 a4ee5a6e58329270ae3a30d61eb5a483 205 PANTHER PTHR30173 3 205 3.3E-34 T 23-04-2016 NIAKO_RS00405 ce88bd2fa11a82cb079b49568a8f3db7 389 PANTHER PTHR12526 218 389 6.5E-25 T 23-04-2016 NIAKO_RS00405 ce88bd2fa11a82cb079b49568a8f3db7 389 Gene3D G3DSA:3.40.50.2000 211 367 1.3E-18 T 23-04-2016 NIAKO_RS00405 ce88bd2fa11a82cb079b49568a8f3db7 389 SUPERFAMILY SSF53756 84 387 1.54E-45 T 23-04-2016 NIAKO_RS00405 ce88bd2fa11a82cb079b49568a8f3db7 389 Pfam PF13692 Glycosyl transferases group 1 216 356 2.8E-20 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532:SF57 228 491 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532:SF57 593 1041 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532:SF57 1 204 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 SUPERFAMILY SSF49464 33 125 5.1E-18 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Pfam PF13715 CarboxypepD_reg-like domain 34 121 5.8E-20 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532 228 491 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532 593 1041 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 PANTHER PTHR11532 1 204 2.2E-123 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.170.130.10 123 261 8.9E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.40.170.20 455 808 1.6E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.40.170.20 262 281 1.6E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.40.170.20 893 1043 1.6E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.40.170.20 348 422 1.6E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.40.170.20 851 852 1.6E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Gene3D G3DSA:2.60.40.1120 33 122 3.4E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 SUPERFAMILY SSF56935 460 808 8.06E-90 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 SUPERFAMILY SSF56935 339 427 8.06E-90 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 SUPERFAMILY SSF56935 117 285 8.06E-90 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 SUPERFAMILY SSF56935 881 1043 8.06E-90 T 23-04-2016 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 33 1043 5.4E-172 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS04660 a891d8881f6c65d0435e455c8ed0b61c 1043 Pfam PF07715 TonB-dependent Receptor Plug Domain 131 261 4.7E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03970 717c90982a581202b6333013e0dea6bc 865 PANTHER PTHR34697 241 863 4.1E-89 T 23-04-2016 NIAKO_RS03970 717c90982a581202b6333013e0dea6bc 865 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 554 845 2.9E-65 T 23-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal NIAKO_RS03970 717c90982a581202b6333013e0dea6bc 865 PANTHER PTHR34697:SF2 241 863 4.1E-89 T 23-04-2016 NIAKO_RS03970 717c90982a581202b6333013e0dea6bc 865 SUPERFAMILY SSF55729 665 844 8.48E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03970 717c90982a581202b6333013e0dea6bc 865 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 25 316 7.2E-25 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 573 768 1.3E-33 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 597 712 1.1E-9 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 PANTHER PTHR32309 27 122 8.2E-121 T 23-04-2016 NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 PANTHER PTHR32309 199 792 8.2E-121 T 23-04-2016 NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 Gene3D G3DSA:3.40.50.300 592 768 2.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 SUPERFAMILY SSF52540 594 773 7.77E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 Pfam PF13807 G-rich domain on putative tyrosine kinase 450 529 1.5E-9 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 Pfam PF02706 Chain length determinant protein 29 264 7.7E-16 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 PANTHER PTHR32309:SF13 27 122 8.2E-121 T 23-04-2016 NIAKO_RS34990 507f97385f2fb9a35f9eef8d1a0c4833 811 PANTHER PTHR32309:SF13 199 792 8.2E-121 T 23-04-2016 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 PANTHER PTHR30173:SF20 1 191 1.5E-37 T 23-04-2016 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 SUPERFAMILY SSF88659 113 179 1.12E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 SUPERFAMILY SSF88946 7 101 9.81E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 Pfam PF04542 Sigma-70 region 2 27 90 3.4E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 Pfam PF08281 Sigma-70, region 4 123 174 1.6E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 PANTHER PTHR30173 1 191 1.5E-37 T 23-04-2016 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 Gene3D G3DSA:1.10.10.10 118 180 1.6E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 177 4.4E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13140 15afc9b45eee55c77312597d27b169bd 191 Gene3D G3DSA:1.10.1740.10 7 103 3.3E-15 T 23-04-2016 NIAKO_RS36700 321c0ad38645e5ac47a03916204f816f 337 PANTHER PTHR30273:SF2 5 326 1.2E-49 T 23-04-2016 NIAKO_RS36700 321c0ad38645e5ac47a03916204f816f 337 Pfam PF04773 FecR protein 123 212 1.6E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS36700 321c0ad38645e5ac47a03916204f816f 337 PANTHER PTHR30273 5 326 1.2E-49 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS36700 321c0ad38645e5ac47a03916204f816f 337 Pfam PF16344 Domain of unknown function (DUF4974) 229 323 3.6E-9 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 3.1E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 Gene3D G3DSA:1.10.10.10 126 181 4.2E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 SUPERFAMILY SSF88659 123 181 6.17E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 PANTHER PTHR30173 3 180 3.1E-46 T 23-04-2016 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 SUPERFAMILY SSF88946 8 97 2.83E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 Pfam PF08281 Sigma-70, region 4 126 176 2.0E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 PANTHER PTHR30173:SF31 3 180 3.1E-46 T 23-04-2016 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 Gene3D G3DSA:1.10.1740.10 8 106 4.0E-26 T 23-04-2016 NIAKO_RS28305 b7f7b0d34a58aa21969cc43a884e8441 181 Pfam PF04542 Sigma-70 region 2 27 93 2.5E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23975 8fc189b3002df24b657414d11551cbdb 296 SUPERFAMILY SSF52540 45 185 5.31E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23975 8fc189b3002df24b657414d11551cbdb 296 Gene3D G3DSA:3.40.50.300 72 186 6.8E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23975 8fc189b3002df24b657414d11551cbdb 296 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 51 172 1.4E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 PANTHER PTHR10099 1 218 2.0E-101 T 23-04-2016 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 5 205 4.4E-41 T 23-04-2016 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 SUPERFAMILY SSF52317 1 218 1.95E-65 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 Gene3D G3DSA:3.40.50.880 1 216 3.3E-35 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 219 41.165 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 PIRSF PIRSF001586 1 223 2.4E-78 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 SMART SM01211 1 221 6.6E-109 T 23-04-2016 NIAKO_RS36155 9ae0c9d65af833b069981ef6169df4c0 234 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 1.6E-84 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 PANTHER PTHR24567 10 189 1.1E-20 T 23-04-2016 NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 Pfam PF00027 Cyclic nucleotide-binding domain 30 117 5.6E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 PANTHER PTHR24567:SF33 10 189 1.1E-20 T 23-04-2016 NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 SMART SM00100 11 130 7.2E-5 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 Gene3D G3DSA:2.60.120.10 2 155 1.2E-43 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS09475 a1f808bba6e7e610b6e8d3b393c3e0e2 194 SUPERFAMILY SSF51206 16 143 2.49E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Gene3D G3DSA:1.10.286.20 195 241 1.5E-13 T 23-04-2016 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 SUPERFAMILY SSF54713 59 96 1.31E-36 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 SUPERFAMILY SSF54713 177 279 1.31E-36 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Gene3D G3DSA:1.10.8.10 5 57 5.8E-25 T 23-04-2016 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Pfam PF00889 Elongation factor TS 78 279 4.6E-63 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 PANTHER PTHR11741 1 279 7.4E-82 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 SUPERFAMILY SSF46934 5 57 5.41E-17 T 23-04-2016 IPR009060 UBA-like GO:0005515 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Gene3D G3DSA:3.30.479.20 243 279 2.2E-25 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Gene3D G3DSA:3.30.479.20 178 193 2.2E-25 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Gene3D G3DSA:3.30.479.20 59 97 2.2E-25 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 5 279 2.3E-75 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NIAKO_RS29690 14c1dc3de79fce0fe3099fe526ceeec0 279 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 59.717 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 SMART SM00450 7 135 3.2E-20 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 SMART SM00450 158 274 2.0E-5 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 PANTHER PTHR11364:SF0 1 279 1.3E-76 T 23-04-2016 NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 PANTHER PTHR11364 1 279 1.3E-76 T 23-04-2016 NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 SUPERFAMILY SSF52821 1 156 2.1E-36 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 SUPERFAMILY SSF52821 161 279 2.1E-23 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 Gene3D G3DSA:3.40.250.10 155 279 4.1E-23 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 Gene3D G3DSA:3.40.250.10 1 154 5.7E-43 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 Pfam PF00581 Rhodanese-like domain 160 269 6.6E-9 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS02560 aed103a48accf317af8cc45a541cecdf 280 Pfam PF00581 Rhodanese-like domain 9 131 9.9E-16 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS13645 b16c0d601b267c625cca9dbc90054d5f 462 SUPERFAMILY SSF48452 18 462 3.8E-63 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13645 b16c0d601b267c625cca9dbc90054d5f 462 Pfam PF07980 SusD family 344 462 2.9E-15 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13645 b16c0d601b267c625cca9dbc90054d5f 462 Gene3D G3DSA:1.25.40.10 216 403 1.1E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13645 b16c0d601b267c625cca9dbc90054d5f 462 Pfam PF14322 Starch-binding associating with outer membrane 22 229 2.5E-26 T 23-04-2016 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 Pfam PF04397 LytTr DNA-binding domain 152 245 1.7E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 Gene3D G3DSA:2.40.50.40 143 209 2.5E-17 T 23-04-2016 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 Pfam PF00072 Response regulator receiver domain 5 112 1.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 Gene3D G3DSA:3.40.50.2300 1 122 3.1E-22 T 23-04-2016 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 SUPERFAMILY SSF52172 1 120 6.26E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 PANTHER PTHR26402 2 118 1.1E-20 T 23-04-2016 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 SMART SM00448 2 112 3.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32625 97fa3cca0e90c0822daad8fa2e039272 247 SMART SM00850 151 247 9.5E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 Pfam PF07687 Peptidase dimerisation domain 171 269 3.0E-12 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 Pfam PF01546 Peptidase family M20/M25/M40 70 354 9.3E-21 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 Gene3D G3DSA:3.30.70.360 184 273 1.0E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 Gene3D G3DSA:3.40.630.10 297 356 1.2E-52 T 23-04-2016 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 Gene3D G3DSA:3.40.630.10 10 183 1.2E-52 T 23-04-2016 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 SUPERFAMILY SSF55031 175 271 9.87E-16 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 69 78 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 PANTHER PTHR11014 8 357 1.8E-53 T 23-04-2016 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 SUPERFAMILY SSF53187 7 174 4.1E-47 T 23-04-2016 NIAKO_RS28040 8ff0464d493ae9bb810408c352db558e 357 SUPERFAMILY SSF53187 284 356 4.1E-47 T 23-04-2016 NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 SUPERFAMILY SSF52317 2 163 2.93E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 Gene3D G3DSA:3.40.50.10740 3 164 1.0E-47 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 SUPERFAMILY SSF141986 147 295 1.31E-38 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 Gene3D G3DSA:3.50.30.60 165 297 1.3E-40 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 PANTHER PTHR30237:SF2 2 300 1.0E-91 T 23-04-2016 NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 PIRSF PIRSF028757 2 302 7.5E-88 T 23-04-2016 IPR003507 Peptidase family S66 NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 Pfam PF02016 LD-carboxypeptidase 14 289 1.3E-76 T 23-04-2016 IPR003507 Peptidase family S66 NIAKO_RS36115 deee29f79b8b972254b88ab88617b07f 302 PANTHER PTHR30237 2 300 1.0E-91 T 23-04-2016 NIAKO_RS00185 39379b33e221699819d227bb129483a3 367 SUPERFAMILY SSF48208 54 361 1.59E-54 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS00185 39379b33e221699819d227bb129483a3 367 PANTHER PTHR33886:SF2 57 360 1.6E-45 T 23-04-2016 NIAKO_RS00185 39379b33e221699819d227bb129483a3 367 PANTHER PTHR33886 57 360 1.6E-45 T 23-04-2016 NIAKO_RS00185 39379b33e221699819d227bb129483a3 367 Pfam PF07470 Glycosyl Hydrolase Family 88 58 361 6.5E-57 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS00185 39379b33e221699819d227bb129483a3 367 Gene3D G3DSA:1.50.10.10 36 363 1.4E-75 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 PANTHER PTHR15362:SF5 43 256 4.5E-18 T 23-04-2016 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 PANTHER PTHR15362:SF5 4 24 4.5E-18 T 23-04-2016 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 PANTHER PTHR15362 43 256 4.5E-18 T 23-04-2016 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 PANTHER PTHR15362 4 24 4.5E-18 T 23-04-2016 NIAKO_RS26895 5ac90c72ca0fb04063cfb734107703ac 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 85 1.1E-16 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 SUPERFAMILY SSF51278 1 121 2.88E-51 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 Pfam PF00699 Urease beta subunit 3 99 7.0E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 PANTHER PTHR33569:SF1 1 113 7.0E-64 T 23-04-2016 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 Gene3D G3DSA:2.10.150.10 1 121 2.9E-54 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 9.0E-48 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.621 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 NIAKO_RS02205 5d2ae91a245a1b8b3cf1ff1f2e075a14 123 PANTHER PTHR33569 1 113 7.0E-64 T 23-04-2016 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 Pfam PF01380 SIS domain 125 208 7.6E-11 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 271 32.81 T 23-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 263 5.0E-95 T 23-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 SUPERFAMILY SSF53697 15 248 6.86E-69 T 23-04-2016 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 23-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 PANTHER PTHR10088 8 267 5.3E-109 T 23-04-2016 NIAKO_RS22145 f98b091b08a55acd5fd6bbd05e0d5938 272 Gene3D G3DSA:3.40.50.10490 11 249 5.9E-78 T 23-04-2016 NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Pfam PF12705 PD-(D/E)XK nuclease superfamily 794 1042 3.2E-26 T 23-04-2016 NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 327 3.1E-55 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Pfam PF13361 UvrD-like helicase C-terminal domain 334 725 1.8E-33 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Gene3D G3DSA:3.40.50.300 18 157 6.6E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Gene3D G3DSA:3.40.50.300 227 329 6.6E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 SUPERFAMILY SSF52540 17 177 3.92E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 SUPERFAMILY SSF52540 217 745 3.92E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Gene3D G3DSA:3.40.50.300 338 463 1.2E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 Gene3D G3DSA:3.40.50.300 637 746 1.2E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 PANTHER PTHR11070 2 675 2.4E-90 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS29620 2f8590bc3db9cc1812ec491f2062d480 1061 PANTHER PTHR11070 700 816 2.4E-90 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 SUPERFAMILY SSF51430 1 320 1.57E-102 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 PANTHER PTHR11732 101 327 2.6E-150 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 PANTHER PTHR11732 1 83 2.6E-150 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 Pfam PF00248 Aldo/keto reductase family 16 314 5.8E-77 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 Gene3D G3DSA:3.20.20.100 1 326 1.6E-118 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 PANTHER PTHR11732:SF225 101 327 2.6E-150 T 23-04-2016 NIAKO_RS30520 5067d611b61df30bb73e2c676f555d00 335 PANTHER PTHR11732:SF225 1 83 2.6E-150 T 23-04-2016 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 SUPERFAMILY SSF53041 5 147 9.16E-23 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 SMART SM00857 5 147 1.5E-32 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 Pfam PF00239 Resolvase, N terminal domain 5 146 3.6E-23 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 Gene3D G3DSA:3.40.50.1390 6 121 1.4E-17 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 Gene3D G3DSA:1.20.5.40 122 146 1.4E-9 T 23-04-2016 NIAKO_RS30200 45b8c7052f708693f1552dcc202a2119 227 PANTHER PTHR30461 5 196 6.6E-19 T 23-04-2016 NIAKO_RS19260 30c0f95738a265b51c4da747118b2adf 338 Pfam PF11751 Protein of unknown function (DUF3308) 16 323 2.5E-77 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS19260 30c0f95738a265b51c4da747118b2adf 338 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 323 1.1E-82 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS27925 d32244be8220c6b9bc2e626bdb4b9e64 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 8.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS27925 d32244be8220c6b9bc2e626bdb4b9e64 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 46 1.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS27925 d32244be8220c6b9bc2e626bdb4b9e64 175 Gene3D G3DSA:2.160.10.10 10 167 7.8E-43 T 23-04-2016 NIAKO_RS27925 d32244be8220c6b9bc2e626bdb4b9e64 175 SUPERFAMILY SSF51161 6 147 5.68E-44 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS27925 d32244be8220c6b9bc2e626bdb4b9e64 175 PANTHER PTHR13061 1 172 4.7E-63 T 23-04-2016 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Gene3D G3DSA:3.40.1440.10 17 93 4.0E-10 T 23-04-2016 IPR027299 GIY-YIG domain NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 SUPERFAMILY SSF46600 198 242 5.75E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Pfam PF01541 GIY-YIG catalytic domain 18 91 5.5E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 581 6.5E-156 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 PANTHER PTHR30562 2 598 6.9E-200 T 23-04-2016 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 SMART SM00465 16 97 5.9E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 SUPERFAMILY SSF82771 17 99 2.48E-20 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Pfam PF12826 Helix-hairpin-helix motif 553 605 4.4E-7 T 23-04-2016 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 597 25.331 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 PANTHER PTHR30562:SF1 2 598 6.9E-200 T 23-04-2016 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Pfam PF02151 UvrB/uvrC motif 209 241 3.9E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Gene3D G3DSA:1.10.150.20 550 599 6.0E-13 T 23-04-2016 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Gene3D G3DSA:4.10.860.10 187 241 1.0E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 SUPERFAMILY SSF47781 493 602 4.77E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS33765 19380418036fab478f29fd35160c6391 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 534 5.8E-46 T 23-04-2016 IPR001162 UvrC family homology region NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 SUPERFAMILY SSF88659 117 181 2.99E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 SUPERFAMILY SSF88946 2 94 5.1E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 Gene3D G3DSA:1.10.10.10 120 182 2.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 PANTHER PTHR30173:SF20 1 193 2.1E-49 T 23-04-2016 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 9.1E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 23 180 6.1E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 Pfam PF08281 Sigma-70, region 4 125 175 1.1E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 PANTHER PTHR30173 1 193 2.1E-49 T 23-04-2016 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 Gene3D G3DSA:1.10.1740.10 3 93 1.6E-19 T 23-04-2016 NIAKO_RS11675 69483446ff1b41a698b010851a36b8d6 202 Pfam PF04542 Sigma-70 region 2 28 92 6.1E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 ProSitePatterns PS01068 OmpA-like domain. 136 180 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 SUPERFAMILY SSF103088 78 204 7.46E-41 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 Gene3D G3DSA:3.30.1330.60 90 205 1.3E-45 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 Pfam PF13488 Glycine zipper 30 74 5.3E-11 T 23-04-2016 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 Pfam PF00691 OmpA family 103 198 1.4E-27 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 PANTHER PTHR30128 53 204 4.2E-53 T 23-04-2016 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 PRINTS PR01021 OMPA domain signature 149 165 6.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 PRINTS PR01021 OMPA domain signature 104 126 6.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS00590 fdc2166ddb667e53ecdcedb597fb3c90 221 PRINTS PR01021 OMPA domain signature 134 149 6.5E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 201 229 2.1E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.60.40.1120 27 118 1.0E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.170.130.10 119 225 3.9E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 PANTHER PTHR11532:SF57 523 1056 1.8E-244 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 PANTHER PTHR11532:SF57 1 423 1.8E-244 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1058 1.5E-257 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 PANTHER PTHR11532 523 1056 1.8E-244 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 PANTHER PTHR11532 1 423 1.8E-244 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Pfam PF13715 CarboxypepD_reg-like domain 28 110 6.2E-14 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.40.170.20 957 1058 6.1E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.40.170.20 890 915 6.1E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.40.170.20 317 829 6.1E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Gene3D G3DSA:2.40.170.20 226 247 6.1E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF49464 25 88 2.35E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 223 6.4E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF56935 960 1010 1.68E-79 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF56935 881 925 1.68E-79 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF56935 430 809 1.68E-79 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF56935 308 398 1.68E-79 T 23-04-2016 NIAKO_RS11690 cadaff207ec216319cfe4a29def7d662 1058 SUPERFAMILY SSF56935 108 247 1.68E-79 T 23-04-2016 NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SMART SM00089 120 197 0.89 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SMART SM00089 32 114 0.6 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SMART SM00089 203 282 0.32 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SUPERFAMILY SSF49299 130 196 3.79E-8 T 23-04-2016 IPR000601 PKD domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SUPERFAMILY SSF49299 202 281 4.05E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 SUPERFAMILY SSF49299 32 110 3.14E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 Gene3D G3DSA:2.60.40.670 127 197 1.2E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 Gene3D G3DSA:2.60.40.670 33 111 1.9E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS08370 d2bd42720aaaba0e3b4d1598149b34cb 453 Gene3D G3DSA:2.60.40.670 204 281 4.6E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS16790 6daf5dbad5fa70cc8bb83e5f952571bf 123 SUPERFAMILY SSF47413 6 63 5.63E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16790 6daf5dbad5fa70cc8bb83e5f952571bf 123 Gene3D G3DSA:1.10.260.40 9 62 2.5E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 PANTHER PTHR11532:SF57 21 423 3.2E-295 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 PANTHER PTHR11532:SF57 571 1069 3.2E-295 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 46 1071 8.5E-268 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 Gene3D G3DSA:2.60.40.1120 46 132 1.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 Pfam PF13715 CarboxypepD_reg-like domain 46 128 7.9E-18 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 Gene3D G3DSA:2.170.130.10 133 248 2.6E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 221 251 2.0E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 245 6.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF56935 988 1048 6.11E-63 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF56935 900 944 6.11E-63 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF56935 328 425 6.11E-63 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF56935 124 271 6.11E-63 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF56935 477 829 6.11E-63 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 PANTHER PTHR11532 21 423 3.2E-295 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 PANTHER PTHR11532 571 1069 3.2E-295 T 23-04-2016 NIAKO_RS07215 1466a384ed20a04113cc54846ca75a6b 1071 SUPERFAMILY SSF49464 44 118 4.58E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30975 731d3b59f5b7592331100fd5cf9adf91 218 Gene3D G3DSA:3.40.30.10 4 68 1.7E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS30975 731d3b59f5b7592331100fd5cf9adf91 218 Gene3D G3DSA:1.10.472.60 69 174 1.3E-16 T 23-04-2016 IPR023169 UPF0413, central domain NIAKO_RS30975 731d3b59f5b7592331100fd5cf9adf91 218 Pfam PF01323 DSBA-like thioredoxin domain 9 207 1.9E-8 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 NIAKO_RS30975 731d3b59f5b7592331100fd5cf9adf91 218 SUPERFAMILY SSF52833 4 211 1.24E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 84 6.4E-34 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PIRSF PIRSF000349 1 202 1.2E-83 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PANTHER PTHR11404 1 202 1.4E-108 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 Gene3D G3DSA:1.10.287.990 20 85 8.9E-28 T 23-04-2016 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.1E-40 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 SUPERFAMILY SSF46609 1 86 1.14E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.5E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.5E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.5E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.5E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.5E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS32485 f47f6d5072c9d54ce86a7ca5ecc7935c 202 SUPERFAMILY SSF54719 87 200 5.24E-45 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NIAKO_RS14750 706d5a54def1dacb6ed698f5d899e367 133 Gene3D G3DSA:3.30.565.10 19 128 1.4E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14750 706d5a54def1dacb6ed698f5d899e367 133 SMART SM00387 33 133 1.6E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14750 706d5a54def1dacb6ed698f5d899e367 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 127 3.7E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14750 706d5a54def1dacb6ed698f5d899e367 133 SUPERFAMILY SSF55874 25 128 1.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 Pfam PF09190 DALR domain 380 441 1.8E-8 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 5.4E-24 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 5.4E-24 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 238 259 5.4E-24 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 207 225 5.4E-24 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 PANTHER PTHR10890 3 491 4.3E-181 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 Gene3D G3DSA:3.40.50.620 21 329 7.4E-91 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 337 2.0E-98 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 SUPERFAMILY SSF47323 364 491 5.23E-27 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 497 34.209 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 Gene3D G3DSA:1.20.120.640 331 426 2.1E-13 T 23-04-2016 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 SUPERFAMILY SSF52374 3 337 4.22E-80 T 23-04-2016 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 SMART SM00840 377 448 1.6E-5 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 NIAKO_RS29870 8d871e896a04d3a1597ee2c209f0c3da 498 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 491 1.4E-131 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Pfam PF07715 TonB-dependent Receptor Plug Domain 206 310 1.1E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF49464 115 196 6.54E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Pfam PF13715 CarboxypepD_reg-like domain 117 198 8.3E-12 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Pfam PF07660 Secretin and TonB N terminus short domain 50 99 1.3E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF56935 417 486 2.01E-62 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF56935 196 338 2.01E-62 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF56935 517 878 2.01E-62 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF56935 1074 1122 2.01E-62 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 SUPERFAMILY SSF56935 978 1021 2.01E-62 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Gene3D G3DSA:2.170.130.10 208 320 3.8E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Gene3D G3DSA:2.60.40.1120 117 207 1.3E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532:SF57 530 920 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532:SF57 939 1168 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532:SF57 117 464 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 116 1170 2.5E-233 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 286 316 6.5E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532 530 920 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532 939 1168 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 PANTHER PTHR11532 117 464 1.3E-213 T 23-04-2016 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Gene3D G3DSA:2.40.170.20 416 887 1.1E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Gene3D G3DSA:2.40.170.20 986 1028 1.1E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29260 37166e0cdb1c58ed82207f5ce0a91bfa 1170 Gene3D G3DSA:2.40.170.20 1087 1119 1.1E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 Pfam PF00072 Response regulator receiver domain 5 112 9.9E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 Pfam PF04397 LytTr DNA-binding domain 153 245 3.7E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 PANTHER PTHR26402 2 135 2.4E-29 T 23-04-2016 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 SMART SM00448 2 112 7.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 Gene3D G3DSA:2.40.50.40 142 211 1.8E-15 T 23-04-2016 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 Gene3D G3DSA:3.40.50.2300 2 123 1.7E-27 T 23-04-2016 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 SMART SM00850 150 244 8.8E-20 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS10050 ec4f4c5264a8e9da8f893a9b69cf3a8b 246 SUPERFAMILY SSF52172 1 129 8.54E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532 722 1176 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532 664 690 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532 143 565 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 319 348 2.4E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Pfam PF13715 CarboxypepD_reg-like domain 145 227 3.1E-19 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532:SF57 722 1176 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532:SF57 664 690 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 PANTHER PTHR11532:SF57 143 565 2.0E-268 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 144 1178 4.5E-272 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Gene3D G3DSA:2.40.170.20 1055 1178 1.4E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Gene3D G3DSA:2.40.170.20 459 938 1.4E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 561 613 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 459 530 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 1010 1056 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 836 938 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 225 370 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 1095 1178 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF56935 645 808 1.88E-85 T 23-04-2016 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Pfam PF07715 TonB-dependent Receptor Plug Domain 235 342 1.5E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Gene3D G3DSA:2.60.40.1120 145 206 1.2E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 Gene3D G3DSA:2.170.130.10 235 352 7.3E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13155 c1f73661c78c371554e92b01e09058fb 1178 SUPERFAMILY SSF49464 144 215 1.96E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 Pfam PF00366 Ribosomal protein S17 12 79 2.2E-35 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 SUPERFAMILY SSF50249 7 84 6.0E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.1E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 27.238 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 78 1.0E-27 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 PANTHER PTHR10744 7 84 5.3E-42 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 Gene3D G3DSA:2.40.50.140 7 84 6.8E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22955 691453b04165f39bcdf4be12b7cc89d7 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 3.3E-39 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS02555 257af0016511e20c70106a02f8a33336 220 Pfam PF00239 Resolvase, N terminal domain 4 139 8.5E-25 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS02555 257af0016511e20c70106a02f8a33336 220 Gene3D G3DSA:3.40.50.1390 3 122 4.1E-14 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS02555 257af0016511e20c70106a02f8a33336 220 SUPERFAMILY SSF53041 4 139 1.7E-21 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS02555 257af0016511e20c70106a02f8a33336 220 SMART SM00857 4 140 2.2E-28 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS02555 257af0016511e20c70106a02f8a33336 220 PANTHER PTHR30461 1 142 2.9E-16 T 23-04-2016 NIAKO_RS26270 02b87087e1292a5aab8c8544ba89107f 399 SUPERFAMILY SSF53756 30 394 1.12E-69 T 23-04-2016 NIAKO_RS26270 02b87087e1292a5aab8c8544ba89107f 399 Pfam PF13439 Glycosyltransferase Family 4 62 204 5.2E-10 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS26270 02b87087e1292a5aab8c8544ba89107f 399 Gene3D G3DSA:3.40.50.2000 218 355 3.6E-21 T 23-04-2016 NIAKO_RS26270 02b87087e1292a5aab8c8544ba89107f 399 PANTHER PTHR12526 98 396 3.5E-53 T 23-04-2016 NIAKO_RS26270 02b87087e1292a5aab8c8544ba89107f 399 Pfam PF00534 Glycosyl transferases group 1 216 360 1.3E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS36855 711bd98cff9523e5f4d5a14fe437668c 877 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 92 121 1.2E-5 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS36855 711bd98cff9523e5f4d5a14fe437668c 877 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 802 877 1.9E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36855 711bd98cff9523e5f4d5a14fe437668c 877 SUPERFAMILY SSF50998 621 671 2.28E-11 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS36855 711bd98cff9523e5f4d5a14fe437668c 877 SUPERFAMILY SSF50998 270 568 2.28E-11 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS36855 711bd98cff9523e5f4d5a14fe437668c 877 SUPERFAMILY SSF50998 84 337 1.02E-6 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS09870 dd5fc7f4e4158ebd85b456d84d297750 285 Pfam PF13559 Domain of unknown function (DUF4129) 212 273 4.3E-6 T 23-04-2016 IPR025403 Domain of unknown function DUF4129 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Gene3D G3DSA:3.40.50.620 2 232 2.0E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 SUPERFAMILY SSF52374 2 323 4.44E-93 T 23-04-2016 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Pfam PF00579 tRNA synthetases class I (W and Y) 29 323 8.5E-79 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PANTHER PTHR11766 1 424 8.3E-187 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 8.2E-118 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 424 41.692 T 23-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 SUPERFAMILY SSF55174 354 424 8.24E-16 T 23-04-2016 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Gene3D G3DSA:3.10.290.10 317 424 1.2E-25 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 41 63 3.5E-28 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 3.5E-28 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 3.5E-28 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 3.5E-28 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Pfam PF01479 S4 domain 363 401 6.6E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 Gene3D G3DSA:1.10.240.10 233 316 2.8E-35 T 23-04-2016 NIAKO_RS24320 fc783fbe1f71c0faa7f56a8012c51b1d 425 PANTHER PTHR11766:SF0 1 424 8.3E-187 T 23-04-2016 NIAKO_RS01405 64821a541e2a24833ac3be34449456e8 209 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 19 207 2.0E-38 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 NIAKO_RS01405 64821a541e2a24833ac3be34449456e8 209 PANTHER PTHR36122:SF1 18 206 9.4E-44 T 23-04-2016 NIAKO_RS01405 64821a541e2a24833ac3be34449456e8 209 PANTHER PTHR36122 18 206 9.4E-44 T 23-04-2016 NIAKO_RS01405 64821a541e2a24833ac3be34449456e8 209 Pfam PF04973 Nicotinamide mononucleotide transporter 19 204 1.0E-56 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 NIAKO_RS24610 f29e0219c8500706d4bde592be4b5a2e 415 Pfam PF13088 BNR repeat-like domain 85 373 1.2E-17 T 23-04-2016 IPR011040 Sialidases NIAKO_RS24610 f29e0219c8500706d4bde592be4b5a2e 415 SUPERFAMILY SSF50939 60 407 1.04E-66 T 23-04-2016 IPR011040 Sialidases NIAKO_RS24610 f29e0219c8500706d4bde592be4b5a2e 415 PANTHER PTHR10628 68 413 1.7E-40 T 23-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS24610 f29e0219c8500706d4bde592be4b5a2e 415 PANTHER PTHR10628:SF5 68 413 1.7E-40 T 23-04-2016 NIAKO_RS24610 f29e0219c8500706d4bde592be4b5a2e 415 Gene3D G3DSA:2.120.10.10 61 403 2.5E-63 T 23-04-2016 IPR011040 Sialidases NIAKO_RS07325 ebe2d4d03827f0602322d28b552bfd1d 343 Pfam PF11589 Domain of unknown function (DUF3244) 245 334 6.1E-7 T 23-04-2016 IPR021638 Protein of unknown function DUF3244 NIAKO_RS07325 ebe2d4d03827f0602322d28b552bfd1d 343 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 275 342 2.0E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS07325 ebe2d4d03827f0602322d28b552bfd1d 343 Pfam PF10162 G8 domain 57 110 1.3E-5 T 23-04-2016 IPR019316 G8 domain NIAKO_RS07325 ebe2d4d03827f0602322d28b552bfd1d 343 Gene3D G3DSA:2.60.40.10 173 256 5.9E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 Pfam PF00107 Zinc-binding dehydrogenase 178 292 2.9E-24 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 Gene3D G3DSA:3.40.50.720 173 288 2.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 SMART SM00829 8 344 6.7E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 PANTHER PTHR11695 12 347 2.0E-121 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 PANTHER PTHR11695:SF559 12 347 2.0E-121 T 23-04-2016 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 6.9E-31 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 SUPERFAMILY SSF50129 1 156 3.8E-58 T 23-04-2016 IPR011032 GroES-like NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 Gene3D G3DSA:3.90.180.10 1 172 5.3E-56 T 23-04-2016 IPR011032 GroES-like NIAKO_RS09275 fe1e8ecab1e5c494df38b550a2c56270 347 SUPERFAMILY SSF51735 143 300 2.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16320 0a87ff29ad128b02af2deb5f388f6bd0 84 Pfam PF00072 Response regulator receiver domain 6 77 5.3E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16320 0a87ff29ad128b02af2deb5f388f6bd0 84 Gene3D G3DSA:3.40.50.2300 7 82 2.7E-19 T 23-04-2016 NIAKO_RS16320 0a87ff29ad128b02af2deb5f388f6bd0 84 SUPERFAMILY SSF52172 7 82 2.13E-18 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS16320 0a87ff29ad128b02af2deb5f388f6bd0 84 PANTHER PTHR26402 8 81 8.2E-15 T 23-04-2016 NIAKO_RS30780 fbbdf998059b5839c855886941268db7 296 Pfam PF01261 Xylose isomerase-like TIM barrel 114 237 4.1E-18 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30780 fbbdf998059b5839c855886941268db7 296 SUPERFAMILY SSF51658 44 279 1.16E-54 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30780 fbbdf998059b5839c855886941268db7 296 PANTHER PTHR12110:SF25 39 276 1.7E-70 T 23-04-2016 NIAKO_RS30780 fbbdf998059b5839c855886941268db7 296 Gene3D G3DSA:3.20.20.150 45 281 1.9E-57 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30780 fbbdf998059b5839c855886941268db7 296 PANTHER PTHR12110 39 276 1.7E-70 T 23-04-2016 NIAKO_RS06435 01735da9e25572d647a062a305936933 372 Pfam PF13394 4Fe-4S single cluster domain 48 115 2.4E-5 T 23-04-2016 NIAKO_RS06435 01735da9e25572d647a062a305936933 372 Pfam PF13186 Iron-sulfur cluster-binding domain 297 344 1.8E-5 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain NIAKO_RS06435 01735da9e25572d647a062a305936933 372 SUPERFAMILY SSF102114 39 342 1.31E-26 T 23-04-2016 NIAKO_RS06435 01735da9e25572d647a062a305936933 372 Gene3D G3DSA:3.20.20.70 36 344 9.4E-28 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS27745 8ff33cc55b67aa56f7a2f9b0d67528a9 241 PANTHER PTHR30294:SF5 6 234 1.6E-32 T 23-04-2016 NIAKO_RS27745 8ff33cc55b67aa56f7a2f9b0d67528a9 241 Pfam PF12679 ABC-2 family transporter protein 62 196 7.5E-13 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 NIAKO_RS27745 8ff33cc55b67aa56f7a2f9b0d67528a9 241 TIGRFAM TIGR03518 ABC_perm_GldF: gliding motility-associated ABC transporter permease protein GldF 1 238 4.6E-95 T 23-04-2016 IPR019860 Gliding motility-associated ABC transporter permease protein GldF NIAKO_RS27745 8ff33cc55b67aa56f7a2f9b0d67528a9 241 PANTHER PTHR30294 6 234 1.6E-32 T 23-04-2016 NIAKO_RS03960 e394a85f71ab74f921cd74ff30d6f3b9 498 PANTHER PTHR31901 22 464 2.3E-44 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS03960 e394a85f71ab74f921cd74ff30d6f3b9 498 Pfam PF03321 GH3 auxin-responsive promoter 22 215 7.2E-32 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS03960 e394a85f71ab74f921cd74ff30d6f3b9 498 Pfam PF03321 GH3 auxin-responsive promoter 233 484 7.0E-49 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS03960 e394a85f71ab74f921cd74ff30d6f3b9 498 PANTHER PTHR31901:SF5 22 464 2.3E-44 T 23-04-2016 NIAKO_RS03960 e394a85f71ab74f921cd74ff30d6f3b9 498 SUPERFAMILY SSF56801 91 393 2.75E-5 T 23-04-2016 NIAKO_RS11080 86c6cb25162c3780ef266569a66c842e 1078 Pfam PF05170 AsmA family 11 206 8.8E-9 T 23-04-2016 IPR007844 AsmA NIAKO_RS11080 86c6cb25162c3780ef266569a66c842e 1078 Pfam PF13502 AsmA-like C-terminal region 845 1019 6.0E-14 T 23-04-2016 IPR032712 AsmA-like, C-terminal NIAKO_RS07970 86a587fb521b37c3d92ec000e306026d 205 Gene3D G3DSA:3.40.50.1110 5 201 6.0E-29 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07970 86a587fb521b37c3d92ec000e306026d 205 SUPERFAMILY SSF52266 2 203 1.83E-29 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07970 86a587fb521b37c3d92ec000e306026d 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 188 2.3E-22 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS27505 d9a341d2bd038812b81af1d548884b8a 264 PANTHER PTHR30060:SF1 1 253 5.4E-91 T 23-04-2016 NIAKO_RS27505 d9a341d2bd038812b81af1d548884b8a 264 PANTHER PTHR30060 1 253 5.4E-91 T 23-04-2016 NIAKO_RS27505 d9a341d2bd038812b81af1d548884b8a 264 Pfam PF03741 Integral membrane protein TerC family 14 208 2.3E-45 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 NIAKO_RS15380 6b31fa0c6082871df0172a3389a420a4 201 PANTHER PTHR30565 26 194 3.7E-50 T 23-04-2016 NIAKO_RS15380 6b31fa0c6082871df0172a3389a420a4 201 Pfam PF05974 Domain of unknown function (DUF892) 27 183 4.9E-59 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS15380 6b31fa0c6082871df0172a3389a420a4 201 Gene3D G3DSA:1.20.1260.10 23 186 1.4E-64 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS15380 6b31fa0c6082871df0172a3389a420a4 201 SUPERFAMILY SSF47240 24 176 1.08E-49 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS15380 6b31fa0c6082871df0172a3389a420a4 201 PANTHER PTHR30565:SF2 26 194 3.7E-50 T 23-04-2016 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 337 3.6E-117 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 PANTHER PTHR10366 3 335 9.4E-117 T 23-04-2016 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 Gene3D G3DSA:3.90.25.10 268 336 3.7E-43 T 23-04-2016 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 Gene3D G3DSA:3.90.25.10 181 233 3.7E-43 T 23-04-2016 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 7.0E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 SUPERFAMILY SSF51735 1 335 5.83E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 PANTHER PTHR10366:SF39 3 335 9.4E-117 T 23-04-2016 NIAKO_RS33900 bd3a62f4210c029227fda8d6d9893919 351 Gene3D G3DSA:3.40.50.720 1 180 6.3E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 Gene3D G3DSA:1.10.10.60 255 301 1.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 Gene3D G3DSA:1.10.10.60 219 249 2.0E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 SUPERFAMILY SSF46689 255 301 8.96E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 300 2.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 284 2.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 SMART SM00342 217 300 1.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 Pfam PF12833 Helix-turn-helix domain 223 301 1.7E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 PANTHER PTHR11019:SF50 49 300 2.5E-42 T 23-04-2016 NIAKO_RS08785 a3ff0a088ef083b1554206073a2673a9 302 PANTHER PTHR11019 49 300 2.5E-42 T 23-04-2016 NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 PANTHER PTHR10366:SF41 1 346 7.1E-160 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 Gene3D G3DSA:3.40.50.720 1 185 3.4E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 Gene3D G3DSA:3.90.25.10 186 343 2.6E-56 T 23-04-2016 NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 PANTHER PTHR10366 1 346 7.1E-160 T 23-04-2016 NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 SUPERFAMILY SSF51735 2 344 8.06E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 1 332 1.6E-140 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NIAKO_RS24680 3798188194d99d8496b4cabc908350b4 349 Pfam PF16363 GDP-mannose 4,6 dehydratase 1 319 5.2E-99 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33910 388b998f4b7895d1947990618853d936 356 Pfam PF01384 Phosphate transporter family 19 165 1.9E-38 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS33910 388b998f4b7895d1947990618853d936 356 Pfam PF01384 Phosphate transporter family 165 342 1.0E-49 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS33910 388b998f4b7895d1947990618853d936 356 PANTHER PTHR11101 233 352 1.2E-84 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS33910 388b998f4b7895d1947990618853d936 356 PANTHER PTHR11101 4 215 1.2E-84 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 Gene3D G3DSA:2.120.10.80 60 334 9.2E-37 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 Pfam PF13964 Kelch motif 193 234 1.4E-8 T 23-04-2016 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 SUPERFAMILY SSF117281 47 140 3.27E-11 T 23-04-2016 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 SUPERFAMILY SSF117281 124 336 2.48E-32 T 23-04-2016 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 PANTHER PTHR24412 68 291 6.3E-14 T 23-04-2016 NIAKO_RS23285 fa564b4eb040ae4f05668e823ed467a5 343 Pfam PF13415 Galactose oxidase, central domain 59 103 3.3E-5 T 23-04-2016 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.6E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.6E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 SUPERFAMILY SSF46689 2 72 2.46E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 PANTHER PTHR30055 4 163 5.0E-15 T 23-04-2016 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 Gene3D G3DSA:1.10.357.10 2 188 1.4E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 Pfam PF13972 Bacterial transcriptional repressor 59 203 2.4E-26 T 23-04-2016 IPR025722 Bacterial transcriptional repressor TetR NIAKO_RS12165 4489c0b201f74aff6d384c5c69f5b7fc 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 2.6E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 30.633 T 23-04-2016 IPR013005 50S ribosomal protein uL4 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 5.1E-60 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 Gene3D G3DSA:3.40.1370.10 58 203 2.0E-51 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 SUPERFAMILY SSF52166 1 204 4.45E-68 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 PANTHER PTHR10746 1 197 1.3E-71 T 23-04-2016 IPR013005 50S ribosomal protein uL4 NIAKO_RS22995 b8df434e848cbaee8efac377dec09314 210 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 8.9E-70 T 23-04-2016 IPR013005 50S ribosomal protein uL4 NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 115 2.4E-20 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 Gene3D G3DSA:3.40.50.720 2 135 8.1E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 PANTHER PTHR22604 3 354 1.2E-70 T 23-04-2016 NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 Gene3D G3DSA:3.30.360.10 136 336 2.1E-42 T 23-04-2016 NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 SUPERFAMILY SSF51735 3 150 7.45E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10860 9876ffb4c375f85a5d331572b0f0edaf 397 SUPERFAMILY SSF55347 128 258 5.89E-32 T 23-04-2016 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 SUPERFAMILY SSF46626 48 127 4.65E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 Pfam PF00034 Cytochrome c 55 128 2.6E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 Gene3D G3DSA:1.10.760.10 49 128 2.8E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 PRINTS PR00606 Class ID cytochrome C signature 66 79 5.3E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 PRINTS PR00606 Class ID cytochrome C signature 104 114 5.3E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 PRINTS PR00606 Class ID cytochrome C signature 51 64 5.3E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 PRINTS PR00606 Class ID cytochrome C signature 116 126 5.3E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NIAKO_RS30800 8e22155997baa072f59c07a6108e02da 131 PRINTS PR00606 Class ID cytochrome C signature 89 102 5.3E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 PANTHER PTHR30390 1 190 1.5E-76 T 23-04-2016 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 Pfam PF13580 SIS domain 28 146 3.0E-26 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 189 36.866 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 Gene3D G3DSA:3.40.50.10490 2 190 2.0E-60 T 23-04-2016 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 PANTHER PTHR30390:SF6 1 190 1.5E-76 T 23-04-2016 NIAKO_RS12565 499796393417f1e98cd73faf1aca3062 192 SUPERFAMILY SSF53697 3 189 9.64E-53 T 23-04-2016 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 SUPERFAMILY SSF53613 1 292 2.18E-65 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 Pfam PF00294 pfkB family carbohydrate kinase 6 292 8.3E-47 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 PANTHER PTHR10584:SF54 1 305 3.8E-76 T 23-04-2016 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 Gene3D G3DSA:3.40.1190.20 34 305 2.8E-69 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 305 2.3E-92 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 PIRSF PIRSF000535 1 306 2.3E-89 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 PANTHER PTHR10584 1 305 3.8E-76 T 23-04-2016 NIAKO_RS09175 4fa613fdbcd2318e1a92e5c2bbda962e 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 SUPERFAMILY SSF46548 2 154 1.8E-37 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Gene3D G3DSA:3.50.50.60 234 415 6.4E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 5.0E-26 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 SUPERFAMILY SSF51971 383 484 2.82E-7 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PANTHER PTHR11938 344 485 7.3E-152 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PANTHER PTHR11938 26 328 7.3E-152 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 485 9.4E-205 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Gene3D G3DSA:3.40.50.720 147 233 3.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Gene3D G3DSA:3.40.50.720 416 491 3.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 SUPERFAMILY SSF51971 142 416 7.06E-63 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PANTHER PTHR11938:SF75 344 485 7.3E-152 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PANTHER PTHR11938:SF75 26 328 7.3E-152 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Gene3D G3DSA:1.10.1060.10 3 146 5.5E-41 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 472 1.4E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 2.1E-19 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 2.1E-19 T 23-04-2016 NIAKO_RS00525 ed620afcab8a0607a8aff212f3ab8917 501 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 2.1E-19 T 23-04-2016 NIAKO_RS35330 c940dff237a38695afbb3103164dc5d2 75 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 3 61 8.4E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS35330 c940dff237a38695afbb3103164dc5d2 75 SUPERFAMILY SSF47413 2 61 2.08E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS35330 c940dff237a38695afbb3103164dc5d2 75 Gene3D G3DSA:1.10.260.40 3 61 5.7E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 SUPERFAMILY SSF46689 234 280 3.12E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 PANTHER PTHR11019 17 338 2.8E-72 T 23-04-2016 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 Gene3D G3DSA:1.10.10.60 284 334 2.2E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 PANTHER PTHR11019:SF58 17 338 2.8E-72 T 23-04-2016 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 Gene3D G3DSA:3.40.50.880 16 239 5.9E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 Pfam PF01965 DJ-1/PfpI family 49 193 2.9E-17 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 SUPERFAMILY SSF46689 283 334 8.6E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 Pfam PF12833 Helix-turn-helix domain 254 331 1.8E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 SMART SM00342 247 330 3.5E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 SUPERFAMILY SSF52317 15 212 1.6E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS14345 08421c703152ba66c1eb69ef12e2de32 344 Gene3D G3DSA:1.10.10.60 240 283 1.5E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16860 4ab4e3d31d7ac5a5fa4d0339464cc176 440 Gene3D G3DSA:1.25.40.10 193 386 3.6E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16860 4ab4e3d31d7ac5a5fa4d0339464cc176 440 Pfam PF14322 Starch-binding associating with outer membrane 57 210 2.1E-25 T 23-04-2016 NIAKO_RS16860 4ab4e3d31d7ac5a5fa4d0339464cc176 440 Pfam PF07980 SusD family 221 440 2.2E-23 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS16860 4ab4e3d31d7ac5a5fa4d0339464cc176 440 SUPERFAMILY SSF48452 8 440 2.28E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 SUPERFAMILY SSF52440 1 105 5.61E-31 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 SMART SM01209 105 299 5.6E-114 T 23-04-2016 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 PANTHER PTHR10520 1 423 8.2E-218 T 23-04-2016 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 SUPERFAMILY SSF56059 106 323 1.02E-54 T 23-04-2016 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Gene3D G3DSA:3.90.600.10 333 423 1.9E-30 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 SUPERFAMILY SSF51246 332 424 1.1E-29 T 23-04-2016 IPR011054 Rudiment single hybrid motif NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 7.7E-148 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Gene3D G3DSA:3.30.1490.20 124 194 2.8E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Gene3D G3DSA:3.40.50.20 2 97 6.2E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 426 38.573 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 SMART SM01210 333 426 9.3E-44 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 299 4.9E-70 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Gene3D G3DSA:3.30.470.20 195 330 2.0E-53 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 334 423 3.5E-27 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS33830 e5d80b770964b833ae49a297653d7608 426 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 104 3.0E-32 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 SUPERFAMILY SSF51735 153 329 2.31E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 SUPERFAMILY SSF52283 1 165 2.98E-38 T 23-04-2016 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 Gene3D G3DSA:3.40.50.1770 191 361 7.8E-37 T 23-04-2016 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 Gene3D G3DSA:3.40.50.1770 1 169 6.4E-49 T 23-04-2016 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 138 363 2.4E-71 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 SMART SM01003 4 134 6.4E-36 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 SMART SM01002 143 307 2.1E-73 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 1.5E-31 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 Gene3D G3DSA:3.50.50.60 170 190 7.7E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 PANTHER PTHR10160:SF19 1 362 3.6E-148 T 23-04-2016 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 PANTHER PTHR10160 1 362 3.6E-148 T 23-04-2016 NIAKO_RS22515 87ecb58ef6247ee2c90e14dffd211242 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 167 192 - T 23-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 NIAKO_RS15565 a63c1a897736c2b46a474ca02bf75ce1 146 SUPERFAMILY SSF103481 40 144 1.44E-5 T 23-04-2016 NIAKO_RS15565 a63c1a897736c2b46a474ca02bf75ce1 146 PANTHER PTHR34821:SF2 1 146 7.3E-45 T 23-04-2016 NIAKO_RS15565 a63c1a897736c2b46a474ca02bf75ce1 146 PANTHER PTHR34821 1 146 7.3E-45 T 23-04-2016 NIAKO_RS15565 a63c1a897736c2b46a474ca02bf75ce1 146 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 142 1.1E-43 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ NIAKO_RS25800 eb828fba142e1544dad608b3526993c7 648 SUPERFAMILY SSF48230 111 338 3.02E-12 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS25800 eb828fba142e1544dad608b3526993c7 648 Pfam PF07940 Heparinase II/III-like protein 402 555 4.6E-14 T 23-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 Pfam PF12697 Alpha/beta hydrolase family 32 244 2.2E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 SUPERFAMILY SSF53474 27 121 5.92E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 SUPERFAMILY SSF53474 163 246 5.92E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 PANTHER PTHR10992:SF832 30 252 1.0E-31 T 23-04-2016 NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 Gene3D G3DSA:3.40.50.1820 30 248 7.7E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15575 22d8dbdc150700f6b3344a12e46e6c09 253 PANTHER PTHR10992 30 252 1.0E-31 T 23-04-2016 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 Gene3D G3DSA:3.40.50.2300 1 116 1.3E-30 T 23-04-2016 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 Pfam PF04397 LytTr DNA-binding domain 141 227 9.9E-20 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 SUPERFAMILY SSF52172 1 122 9.25E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 SMART SM00448 1 110 4.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 PANTHER PTHR26402 1 148 3.5E-30 T 23-04-2016 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 SMART SM00850 137 228 3.4E-24 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 Pfam PF00072 Response regulator receiver domain 3 110 2.3E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS00230 41eaf52a24f3800fad791e4de0171dd8 230 Gene3D G3DSA:2.40.50.40 128 197 5.9E-21 T 23-04-2016 NIAKO_RS17695 9a6576e29ae0737378e858bdc11986d4 461 Gene3D G3DSA:3.40.50.1820 110 321 5.9E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS17695 9a6576e29ae0737378e858bdc11986d4 461 Pfam PF05448 Acetyl xylan esterase (AXE1) 255 304 4.7E-5 T 23-04-2016 IPR008391 Acetyl xylan esterase NIAKO_RS17695 9a6576e29ae0737378e858bdc11986d4 461 SUPERFAMILY SSF53474 140 313 3.1E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS16890 ac1142bdaf69400dd05680c0c56a16fd 334 PANTHER PTHR30273:SF2 24 333 6.1E-47 T 23-04-2016 NIAKO_RS16890 ac1142bdaf69400dd05680c0c56a16fd 334 PANTHER PTHR30273 24 333 6.1E-47 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16890 ac1142bdaf69400dd05680c0c56a16fd 334 Pfam PF04773 FecR protein 125 221 1.3E-15 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16890 ac1142bdaf69400dd05680c0c56a16fd 334 PIRSF PIRSF018266 24 334 1.3E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16890 ac1142bdaf69400dd05680c0c56a16fd 334 Pfam PF16344 Domain of unknown function (DUF4974) 234 332 6.7E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS12070 34c120a0f59c644457517b53ccb34665 482 SMART SM00089 41 122 1.1E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS12070 34c120a0f59c644457517b53ccb34665 482 SUPERFAMILY SSF63829 171 452 1.31E-5 T 23-04-2016 NIAKO_RS12070 34c120a0f59c644457517b53ccb34665 482 SUPERFAMILY SSF49299 55 119 7.85E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12070 34c120a0f59c644457517b53ccb34665 482 Gene3D G3DSA:2.60.40.670 55 120 3.1E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12070 34c120a0f59c644457517b53ccb34665 482 Pfam PF00801 PKD domain 60 106 2.1E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09235 386a9c030f349a42053ac94cb49ec0a3 168 SUPERFAMILY SSF160574 54 167 3.4E-10 T 23-04-2016 NIAKO_RS23875 38716866b46e3d3d7fe3cd018c7b3226 61 Pfam PF00248 Aldo/keto reductase family 18 55 7.9E-6 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS23875 38716866b46e3d3d7fe3cd018c7b3226 61 Gene3D G3DSA:3.20.20.100 7 61 8.2E-19 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS23875 38716866b46e3d3d7fe3cd018c7b3226 61 SUPERFAMILY SSF51430 7 60 6.68E-17 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS23875 38716866b46e3d3d7fe3cd018c7b3226 61 PANTHER PTHR11732 4 61 1.1E-23 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS23875 38716866b46e3d3d7fe3cd018c7b3226 61 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 SUPERFAMILY SSF110296 430 713 1.31E-30 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 SUPERFAMILY SSF110296 37 405 4.05E-56 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 PANTHER PTHR32438 267 777 5.1E-96 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 PANTHER PTHR32438 40 249 5.1E-96 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 Gene3D G3DSA:2.130.10.140 44 428 9.6E-65 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 Gene3D G3DSA:2.130.10.140 461 710 6.3E-31 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 PANTHER PTHR32438:SF9 267 777 5.1E-96 T 23-04-2016 NIAKO_RS08625 4b39e65b51417cb3a047dc32d173ad6b 908 PANTHER PTHR32438:SF9 40 249 5.1E-96 T 23-04-2016 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 11 659 39.489 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 SUPERFAMILY SSF56014 567 655 2.35E-12 T 23-04-2016 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 15 299 9.9E-95 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 Pfam PF04551 GcpE protein 453 655 1.4E-42 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 Pfam PF04551 GcpE protein 16 296 1.9E-108 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 PIRSF PIRSF037336 1 664 1.6E-237 T 23-04-2016 IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 PANTHER PTHR30454 1 527 4.7E-218 T 23-04-2016 NIAKO_RS32910 5772dc2f2c0a470abb7084c36097c7b5 665 PANTHER PTHR30454 545 662 4.7E-218 T 23-04-2016 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 Gene3D G3DSA:2.40.50.100 67 97 7.7E-14 T 23-04-2016 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 Gene3D G3DSA:2.40.50.100 158 188 7.7E-14 T 23-04-2016 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 349 5.2E-54 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 252 9.0E-20 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 SUPERFAMILY SSF111369 54 271 1.83E-21 T 23-04-2016 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 PANTHER PTHR30469 1 351 1.1E-44 T 23-04-2016 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 3.9E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS27150 43f4097b01bafd5d521029eada25b0bb 351 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 263 284 3.9E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SUPERFAMILY SSF48452 118 300 1.09E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SMART SM00028 295 328 69.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SMART SM00028 215 248 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SMART SM00028 174 207 2.4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SUPERFAMILY SSF55874 546 655 2.49E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 SMART SM00387 568 660 2.1E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 PANTHER PTHR24421:SF10 405 656 5.7E-38 T 23-04-2016 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 PANTHER PTHR24421 405 656 5.7E-38 T 23-04-2016 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 Gene3D G3DSA:3.30.565.10 561 660 5.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 Gene3D G3DSA:1.25.40.10 158 360 8.2E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 Pfam PF07730 Histidine kinase 468 530 6.4E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS06870 663616a196a61f1e857ef72d1dcc7dd6 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 657 2.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 Gene3D G3DSA:1.25.40.10 197 277 5.5E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 Gene3D G3DSA:1.25.40.10 40 68 5.5E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 SUPERFAMILY SSF48452 203 279 1.52E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 Pfam PF13176 Tetratricopeptide repeat 217 240 0.019 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 Pfam PF13181 Tetratricopeptide repeat 251 273 0.054 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 SMART SM00028 215 248 4.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26460 f5c70322221243f1b636e2be676eb75d 296 SMART SM00028 249 282 14.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS31430 27644cd85304a5c449a02bd9766375c2 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 281 2.7E-37 T 23-04-2016 IPR021134 Bestrophin/UPF0187 NIAKO_RS31430 27644cd85304a5c449a02bd9766375c2 303 PANTHER PTHR33281 11 285 3.1E-47 T 23-04-2016 NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 Gene3D G3DSA:3.40.50.300 13 246 1.7E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 SMART SM00382 39 229 3.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 Pfam PF00005 ABC transporter 30 180 6.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 PANTHER PTHR24220 16 250 6.7E-97 T 23-04-2016 NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 PANTHER PTHR24220:SF567 16 250 6.7E-97 T 23-04-2016 NIAKO_RS30625 099c9579c68193a36de574e4129a43df 257 SUPERFAMILY SSF52540 14 244 6.12E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 176 2.0E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 SUPERFAMILY SSF88659 118 179 1.53E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 SUPERFAMILY SSF88946 4 96 4.71E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 Gene3D G3DSA:1.10.1740.10 3 104 6.7E-15 T 23-04-2016 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 Pfam PF08281 Sigma-70, region 4 121 173 2.4E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 PANTHER PTHR30173:SF20 1 193 4.2E-30 T 23-04-2016 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 PANTHER PTHR30173 1 193 4.2E-30 T 23-04-2016 NIAKO_RS15955 57bc4ce2f990dcdf84464ab0f1f60f83 197 Gene3D G3DSA:1.10.10.10 114 179 4.8E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27830 e7b419c7355cac5f2de12b4584e2f8c7 135 Gene3D G3DSA:3.30.160.200 6 99 1.6E-22 T 23-04-2016 NIAKO_RS27830 e7b419c7355cac5f2de12b4584e2f8c7 135 Pfam PF00472 RF-1 domain 6 127 4.8E-18 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NIAKO_RS27830 e7b419c7355cac5f2de12b4584e2f8c7 135 SUPERFAMILY SSF75620 7 108 3.1E-8 T 23-04-2016 NIAKO_RS27830 e7b419c7355cac5f2de12b4584e2f8c7 135 PANTHER PTHR11075 7 131 7.9E-16 T 23-04-2016 NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 PRINTS PR00069 Aldo-keto reductase signature 114 132 5.7E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 PRINTS PR00069 Aldo-keto reductase signature 228 252 5.7E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 PRINTS PR00069 Aldo-keto reductase signature 145 162 5.7E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 Pfam PF00248 Aldo/keto reductase family 18 289 1.2E-49 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 Gene3D G3DSA:3.20.20.100 1 294 1.7E-62 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 PANTHER PTHR11732:SF10 1 295 7.5E-88 T 23-04-2016 NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 SUPERFAMILY SSF51430 1 293 2.75E-67 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS07420 7da1808fdb518143ecc01ee0593ee5ea 297 PANTHER PTHR11732 1 295 7.5E-88 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 Gene3D G3DSA:3.40.1050.10 4 200 1.3E-69 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 Pfam PF00484 Carbonic anhydrase 37 188 1.9E-49 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 PANTHER PTHR11002:SF16 3 208 7.6E-123 T 23-04-2016 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 PANTHER PTHR11002 3 208 7.6E-123 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 SUPERFAMILY SSF53056 4 206 6.93E-70 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS09965 ce433b02c3390f440fe8578d72cd3ed9 212 SMART SM00947 30 193 6.0E-55 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Pfam PF00989 PAS fold 59 158 4.2E-7 T 23-04-2016 IPR013767 PAS fold GO:0006355 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SMART SM00388 193 260 5.0E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SMART SM00387 301 423 8.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PANTHER PTHR24423 55 423 8.7E-75 T 23-04-2016 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PANTHER PTHR24423 9 18 8.7E-75 T 23-04-2016 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SUPERFAMILY SSF55874 250 422 6.68E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 422 2.6E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SUPERFAMILY SSF47384 179 259 1.96E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PANTHER PTHR24423:SF518 55 423 8.7E-75 T 23-04-2016 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 PANTHER PTHR24423:SF518 9 18 8.7E-75 T 23-04-2016 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 259 7.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SMART SM00091 57 123 0.0033 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 59 172 1.4E-8 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Gene3D G3DSA:3.30.450.20 65 163 2.7E-12 T 23-04-2016 NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Gene3D G3DSA:3.30.565.10 246 422 3.7E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 SUPERFAMILY SSF55785 68 175 1.77E-13 T 23-04-2016 IPR000014 PAS domain NIAKO_RS15645 99424ebc1a5799895dc295f5ea879a9c 423 Gene3D G3DSA:1.10.287.130 184 245 9.4E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Pfam PF11734 TilS substrate C-terminal domain 419 486 1.9E-5 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 417 461 8.6E-6 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 PANTHER PTHR11807:SF2 164 493 1.3E-65 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 PANTHER PTHR11807:SF2 2 113 1.3E-65 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 PANTHER PTHR11807 164 493 1.3E-65 T 23-04-2016 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 PANTHER PTHR11807 2 113 1.3E-65 T 23-04-2016 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Gene3D G3DSA:3.40.50.620 3 102 5.1E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Gene3D G3DSA:3.40.50.620 146 229 5.1E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 354 20.694 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 167 252 1.4E-27 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 SUPERFAMILY SSF56037 408 487 6.28E-12 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Pfam PF01171 PP-loop family 23 114 4.6E-17 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 Pfam PF01171 PP-loop family 165 249 1.5E-26 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 SMART SM00977 417 489 1.2E-16 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 SUPERFAMILY SSF52402 9 118 4.04E-46 T 23-04-2016 NIAKO_RS20320 ff00d01a3460316808613f9017a32aad 493 SUPERFAMILY SSF52402 171 279 4.04E-46 T 23-04-2016 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 203 8.0E-33 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 SUPERFAMILY SSF46689 282 330 1.08E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 SMART SM00342 247 329 3.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 PANTHER PTHR11019:SF52 145 329 4.3E-18 T 23-04-2016 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 PANTHER PTHR11019 145 329 4.3E-18 T 23-04-2016 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 Gene3D G3DSA:1.10.10.60 282 331 2.2E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14965 a409b4cb4671b717bf92b840edd27a63 332 Pfam PF12833 Helix-turn-helix domain 254 330 8.4E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15415 3b3f19e85c9b1ec4267e2f6d70770bee 135 PANTHER PTHR33570 1 133 6.9E-52 T 23-04-2016 NIAKO_RS15415 3b3f19e85c9b1ec4267e2f6d70770bee 135 SUPERFAMILY SSF51182 6 130 1.82E-32 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS15415 3b3f19e85c9b1ec4267e2f6d70770bee 135 Gene3D G3DSA:2.60.120.10 6 130 6.9E-33 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS15415 3b3f19e85c9b1ec4267e2f6d70770bee 135 Pfam PF07883 Cupin domain 42 99 2.9E-10 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS15415 3b3f19e85c9b1ec4267e2f6d70770bee 135 PANTHER PTHR33570:SF5 1 133 6.9E-52 T 23-04-2016 NIAKO_RS15790 5658d010d5d9c2eceddfdb7562aa2504 439 SUPERFAMILY SSF51126 37 415 4.49E-74 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS15790 5658d010d5d9c2eceddfdb7562aa2504 439 PANTHER PTHR31339 39 417 3.9E-80 T 23-04-2016 NIAKO_RS15790 5658d010d5d9c2eceddfdb7562aa2504 439 Gene3D G3DSA:2.160.20.10 37 421 1.1E-86 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS15790 5658d010d5d9c2eceddfdb7562aa2504 439 PANTHER PTHR31339:SF0 39 417 3.9E-80 T 23-04-2016 NIAKO_RS15790 5658d010d5d9c2eceddfdb7562aa2504 439 Pfam PF00295 Glycosyl hydrolases family 28 75 347 2.8E-25 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 PANTHER PTHR30273 1 122 5.1E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 PANTHER PTHR30273 187 389 5.1E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 PANTHER PTHR30273:SF2 1 122 5.1E-58 T 23-04-2016 NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 PANTHER PTHR30273:SF2 187 389 5.1E-58 T 23-04-2016 NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 Pfam PF04773 FecR protein 184 278 1.4E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS36800 19111835367ba08215b24902ccd87484 391 Pfam PF16344 Domain of unknown function (DUF4974) 288 388 8.6E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 Gene3D G3DSA:2.60.120.260 833 917 0.001 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848:SF1 175 191 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848:SF1 5 154 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848:SF1 210 785 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 SUPERFAMILY SSF49785 799 923 7.51E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848 175 191 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848 5 154 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 PANTHER PTHR36848 210 785 4.7E-124 T 23-04-2016 NIAKO_RS03615 2fc52450957438100b4f53e9e3190af2 967 Pfam PF17132 alpha-L-rhamnosidase 31 728 6.6E-77 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 Pfam PF16344 Domain of unknown function (DUF4974) 277 376 9.6E-16 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 PANTHER PTHR30273 174 381 1.1E-59 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 PANTHER PTHR30273 1 138 1.1E-59 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 PANTHER PTHR30273:SF2 174 381 1.1E-59 T 23-04-2016 NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 PANTHER PTHR30273:SF2 1 138 1.1E-59 T 23-04-2016 NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 PIRSF PIRSF018266 2 381 8.8E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19305 02dbb190bdea45153a7fb9a651691064 381 Pfam PF04773 FecR protein 174 265 1.2E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 SUPERFAMILY SSF55821 3 200 3.66E-53 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 PANTHER PTHR17490 1 199 1.4E-80 T 23-04-2016 NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 PANTHER PTHR17490:SF7 1 199 1.4E-80 T 23-04-2016 NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 199 1.8E-57 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 Pfam PF01300 Telomere recombination 21 196 2.2E-44 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 NIAKO_RS32060 e32caf2d58d7b57c9f6dcd06a320e15f 206 Gene3D G3DSA:3.90.870.10 2 200 2.3E-59 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532 145 479 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532 497 546 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532 677 1162 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532 622 651 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532:SF57 145 479 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532:SF57 497 546 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532:SF57 677 1162 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 PANTHER PTHR11532:SF57 622 651 2.1E-248 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Gene3D G3DSA:2.40.170.20 341 368 4.7E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Gene3D G3DSA:2.40.170.20 996 1164 4.7E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Gene3D G3DSA:2.40.170.20 434 918 4.7E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Gene3D G3DSA:2.170.130.10 230 340 8.9E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Pfam PF13715 CarboxypepD_reg-like domain 147 227 1.4E-15 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Gene3D G3DSA:2.60.40.1120 146 229 1.5E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF56935 224 365 6.96E-89 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF56935 425 513 6.96E-89 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF56935 550 904 6.96E-89 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF56935 987 1031 6.96E-89 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF56935 1069 1164 6.96E-89 T 23-04-2016 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 Pfam PF07715 TonB-dependent Receptor Plug Domain 236 340 3.8E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 145 1164 4.5E-259 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 SUPERFAMILY SSF49464 146 225 8.89E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06055 0b829f2eed205d0991152e083e9f236f 1164 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 316 346 8.0E-19 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 SUPERFAMILY SSF53067 249 471 1.94E-30 T 23-04-2016 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 SUPERFAMILY SSF53067 5 250 2.41E-47 T 23-04-2016 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 431 2.8E-18 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 PIRSF PIRSF000538 3 478 1.1E-79 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 246 8.2E-46 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 Gene3D G3DSA:3.30.420.40 1 244 1.0E-48 T 23-04-2016 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 PANTHER PTHR10196 1 471 1.1E-97 T 23-04-2016 NIAKO_RS17280 8c433784f2e64de5e8fd56ce7f435986 485 Gene3D G3DSA:3.30.420.40 250 471 5.0E-27 T 23-04-2016 NIAKO_RS34050 11fdf1711532ffe0ccd47502847a757f 97 Pfam PF13601 Winged helix DNA-binding domain 14 93 3.1E-30 T 23-04-2016 IPR027395 Winged helix DNA-binding domain NIAKO_RS34050 11fdf1711532ffe0ccd47502847a757f 97 PANTHER PTHR37318 1 97 2.8E-22 T 23-04-2016 NIAKO_RS34050 11fdf1711532ffe0ccd47502847a757f 97 SUPERFAMILY SSF46785 9 92 2.68E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34050 11fdf1711532ffe0ccd47502847a757f 97 Gene3D G3DSA:1.10.10.10 2 92 9.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 Gene3D G3DSA:1.10.10.60 254 299 2.6E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 SMART SM00342 215 298 3.0E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 3.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 3.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 PANTHER PTHR11019 217 299 1.8E-19 T 23-04-2016 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 SUPERFAMILY SSF46689 254 299 1.57E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 Pfam PF12833 Helix-turn-helix domain 222 299 2.3E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS33510 cbfc72371307666550ba7e61a60ac397 299 PANTHER PTHR11019:SF50 217 299 1.8E-19 T 23-04-2016 NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 Pfam PF01712 Deoxynucleoside kinase 6 197 1.8E-43 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 SUPERFAMILY SSF52540 1 201 8.17E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 PIRSF PIRSF000705 1 206 1.5E-53 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 PANTHER PTHR10513:SF16 1 196 2.7E-52 T 23-04-2016 NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 PANTHER PTHR10513 1 196 2.7E-52 T 23-04-2016 NIAKO_RS04630 5904812d7de76ea12e1c57d2e6ac90ff 210 Gene3D G3DSA:3.40.50.300 3 198 7.9E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532 204 428 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532 13 184 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532 518 1034 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 237 9.4E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Gene3D G3DSA:2.40.170.20 335 793 1.5E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Gene3D G3DSA:2.40.170.20 848 881 1.5E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Gene3D G3DSA:2.170.130.10 102 240 6.5E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Pfam PF13715 CarboxypepD_reg-like domain 20 101 9.4E-17 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532:SF51 204 428 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532:SF51 13 184 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 PANTHER PTHR11532:SF51 518 1034 7.5E-191 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF49464 18 99 2.09E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 18 1036 1.3E-181 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 Gene3D G3DSA:2.60.40.1120 19 101 1.0E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF56935 97 261 3.05E-79 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF56935 323 411 3.05E-79 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF56935 449 793 3.05E-79 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF56935 851 894 3.05E-79 T 23-04-2016 NIAKO_RS28265 bfb3a717625935fa75a8d95426a11232 1036 SUPERFAMILY SSF56935 944 1034 3.05E-79 T 23-04-2016 NIAKO_RS08905 5640fa8afaa13d8e7bf88bf0e4dff596 399 SUPERFAMILY SSF56601 35 337 1.03E-79 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS08905 5640fa8afaa13d8e7bf88bf0e4dff596 399 PANTHER PTHR22935 14 354 2.4E-69 T 23-04-2016 NIAKO_RS08905 5640fa8afaa13d8e7bf88bf0e4dff596 399 Gene3D G3DSA:3.40.710.10 37 351 4.9E-76 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS08905 5640fa8afaa13d8e7bf88bf0e4dff596 399 Pfam PF00144 Beta-lactamase 41 334 3.5E-56 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 PANTHER PTHR30572:SF4 409 786 3.6E-75 T 23-04-2016 NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 PANTHER PTHR30572:SF4 284 349 3.6E-75 T 23-04-2016 NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 Pfam PF12704 MacB-like periplasmic core domain 20 232 5.4E-20 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 Pfam PF02687 FtsX-like permease family 666 775 2.1E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 Pfam PF02687 FtsX-like permease family 284 395 3.3E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 PANTHER PTHR30572 409 786 3.6E-75 T 23-04-2016 NIAKO_RS25525 a931a4dfa94fd6c8fb8e151f7e8f8f37 786 PANTHER PTHR30572 284 349 3.6E-75 T 23-04-2016 NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 SUPERFAMILY SSF51735 2 145 6.12E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 PANTHER PTHR22604:SF14 1 315 2.1E-64 T 23-04-2016 NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 Gene3D G3DSA:3.30.360.10 127 319 4.0E-26 T 23-04-2016 NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 SUPERFAMILY SSF55347 155 237 7.85E-13 T 23-04-2016 NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 9.4E-29 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 Gene3D G3DSA:3.40.50.720 1 126 2.4E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23250 44fd64f1e9b28777bd9c87bd56506577 324 PANTHER PTHR22604 1 315 2.1E-64 T 23-04-2016 NIAKO_RS22260 cd4caafe362724c25e5e86575e685729 185 SUPERFAMILY SSF52833 39 169 2.84E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22260 cd4caafe362724c25e5e86575e685729 185 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS22260 cd4caafe362724c25e5e86575e685729 185 Pfam PF13899 Thioredoxin-like 41 103 2.0E-13 T 23-04-2016 NIAKO_RS22260 cd4caafe362724c25e5e86575e685729 185 Gene3D G3DSA:3.40.30.10 39 164 3.8E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06310 3255996d2c5bd2731c4f0995cd66e07f 311 Pfam PF14378 PAP2 superfamily 117 287 1.1E-23 T 23-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 NIAKO_RS06310 3255996d2c5bd2731c4f0995cd66e07f 311 PANTHER PTHR31310:SF7 14 310 4.7E-31 T 23-04-2016 NIAKO_RS06310 3255996d2c5bd2731c4f0995cd66e07f 311 PANTHER PTHR31310 14 310 4.7E-31 T 23-04-2016 NIAKO_RS27635 9d03f79bc790bbdca3ffc495c03ae3a7 244 SUPERFAMILY SSF48452 129 243 1.9E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27635 9d03f79bc790bbdca3ffc495c03ae3a7 244 Gene3D G3DSA:1.25.40.10 129 198 1.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27635 9d03f79bc790bbdca3ffc495c03ae3a7 244 Pfam PF14559 Tetratricopeptide repeat 145 191 1.3E-5 T 23-04-2016 NIAKO_RS30290 17e2a635d0f46c6d4bcdc8afda8f28d0 113 Pfam PF08888 HopJ type III effector protein 6 110 2.5E-43 T 23-04-2016 IPR014984 HopJ type III effector protein NIAKO_RS30290 17e2a635d0f46c6d4bcdc8afda8f28d0 113 Gene3D G3DSA:3.20.160.10 7 113 7.3E-47 T 23-04-2016 NIAKO_RS00060 23f8f73d61c1be1993d6e136fd065793 315 PANTHER PTHR30213 3 311 5.4E-53 T 23-04-2016 NIAKO_RS00060 23f8f73d61c1be1993d6e136fd065793 315 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 28 288 3.0E-25 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS00060 23f8f73d61c1be1993d6e136fd065793 315 PIRSF PIRSF035875 6 309 1.7E-56 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS00060 23f8f73d61c1be1993d6e136fd065793 315 PANTHER PTHR30213:SF1 3 311 5.4E-53 T 23-04-2016 NIAKO_RS00060 23f8f73d61c1be1993d6e136fd065793 315 Pfam PF03631 Virulence factor BrkB 35 289 1.5E-44 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 Pfam PF00072 Response regulator receiver domain 4 118 9.3E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 PANTHER PTHR26402 1 228 4.1E-63 T 23-04-2016 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 Gene3D G3DSA:3.40.50.2300 1 127 1.8E-29 T 23-04-2016 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 SMART SM00448 1 117 4.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.2E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 Gene3D G3DSA:1.10.10.10 129 230 2.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 SMART SM00862 150 227 2.4E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 SUPERFAMILY SSF46894 127 228 1.3E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 PANTHER PTHR26402:SF545 1 228 4.1E-63 T 23-04-2016 NIAKO_RS20715 16ed160b6fcf8bd0b324c95c121738c7 233 SUPERFAMILY SSF52172 1 123 1.05E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 Gene3D G3DSA:3.20.20.140 318 546 4.6E-38 T 23-04-2016 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 SMART SM00483 1 297 2.3E-5 T 23-04-2016 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 SUPERFAMILY SSF81301 176 296 2.29E-7 T 23-04-2016 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 Gene3D G3DSA:1.10.150.20 93 147 2.3E-6 T 23-04-2016 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 PIRSF PIRSF005047 2 552 9.9E-146 T 23-04-2016 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 SUPERFAMILY SSF47802 2 80 1.31E-15 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 Pfam PF14520 Helix-hairpin-helix domain 92 145 4.0E-6 T 23-04-2016 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 SUPERFAMILY SSF89550 321 551 3.92E-42 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 SMART SM00481 319 398 4.8E-8 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 Gene3D G3DSA:1.10.8.310 4 82 1.6E-17 T 23-04-2016 IPR027420 DNA polymerase beta, N-terminal domain NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 PANTHER PTHR36928 277 551 4.3E-38 T 23-04-2016 NIAKO_RS02810 d90974d42f890580ae00b56fd728f606 557 Pfam PF14716 Helix-hairpin-helix domain 6 71 3.7E-17 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 SMART SM00812 18 411 7.7E-133 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 SUPERFAMILY SSF51445 24 367 1.29E-101 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 Pfam PF01120 Alpha-L-fucosidase 22 363 5.2E-96 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 Gene3D G3DSA:2.60.40.1180 391 456 2.6E-9 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 PIRSF PIRSF001092 12 463 2.7E-128 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 PANTHER PTHR10030 26 179 2.6E-80 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 PANTHER PTHR10030 203 462 2.6E-80 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 107 123 2.1E-7 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 350 372 2.1E-7 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS26385 e46d9d3293ad786d113dcec77a98d910 478 Gene3D G3DSA:3.20.20.80 18 367 1.1E-105 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS20640 f3b090486717a0b86576f39bf7c1f218 335 PANTHER PTHR30468:SF6 29 327 4.5E-52 T 23-04-2016 NIAKO_RS20640 f3b090486717a0b86576f39bf7c1f218 335 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 207 327 1.3E-34 T 23-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent NIAKO_RS20640 f3b090486717a0b86576f39bf7c1f218 335 PIRSF PIRSF018005 2 334 1.0E-79 T 23-04-2016 IPR017804 Methyltransferase EgtD-like NIAKO_RS20640 f3b090486717a0b86576f39bf7c1f218 335 PANTHER PTHR30468 29 327 4.5E-52 T 23-04-2016 NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 3.3E-55 T 23-04-2016 NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.7E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.7E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.7E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.7E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 Gene3D G3DSA:3.40.50.720 2 246 2.5E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PANTHER PTHR24322 151 183 3.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 PANTHER PTHR24322 11 135 3.4E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23820 34848842ee7a5b4ebc8333f30f344df8 250 SUPERFAMILY SSF51735 6 246 1.32E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12680 ad973b7de25aa821372103e8865b39f2 275 Gene3D G3DSA:2.120.10.30 26 187 1.6E-23 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12680 ad973b7de25aa821372103e8865b39f2 275 Gene3D G3DSA:2.120.10.30 225 272 1.6E-23 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12680 ad973b7de25aa821372103e8865b39f2 275 SUPERFAMILY SSF63829 16 274 7.85E-24 T 23-04-2016 NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PANTHER PTHR24322:SF397 146 177 5.2E-46 T 23-04-2016 NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PANTHER PTHR24322:SF397 7 130 5.2E-46 T 23-04-2016 NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PANTHER PTHR24322 146 177 5.2E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PANTHER PTHR24322 7 130 5.2E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 SUPERFAMILY SSF51735 1 244 1.06E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 Pfam PF00106 short chain dehydrogenase 3 185 8.8E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08790 c4f02483700dcb3a7893382259d76a7f 271 Gene3D G3DSA:3.40.50.720 2 246 2.5E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32510 a239b4fb78e3205ac3db3b298a5fdef8 508 SUPERFAMILY SSF48452 28 507 8.09E-116 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32510 a239b4fb78e3205ac3db3b298a5fdef8 508 PANTHER PTHR35148 9 507 2.0E-59 T 23-04-2016 NIAKO_RS32510 a239b4fb78e3205ac3db3b298a5fdef8 508 Pfam PF12771 Starch-binding associating with outer membrane 9 507 9.3E-54 T 23-04-2016 NIAKO_RS14385 e4e35b1fb9c4f8544ef7419d440e089b 248 PANTHER PTHR10434 1 242 5.6E-32 T 23-04-2016 NIAKO_RS14385 e4e35b1fb9c4f8544ef7419d440e089b 248 Gene3D G3DSA:3.40.1130.10 56 221 2.6E-13 T 23-04-2016 NIAKO_RS14385 e4e35b1fb9c4f8544ef7419d440e089b 248 Pfam PF01553 Acyltransferase 71 184 1.4E-19 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS14385 e4e35b1fb9c4f8544ef7419d440e089b 248 SUPERFAMILY SSF69593 9 246 2.22E-33 T 23-04-2016 NIAKO_RS14385 e4e35b1fb9c4f8544ef7419d440e089b 248 SMART SM00563 75 189 8.9E-17 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 Gene3D G3DSA:1.10.10.60 280 324 3.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 PANTHER PTHR11019:SF61 223 324 1.2E-30 T 23-04-2016 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 Gene3D G3DSA:1.10.10.60 227 279 2.0E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 325 1.634098E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 309 1.634098E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 SUPERFAMILY SSF46689 279 324 4.93E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 SMART SM00342 242 325 2.3E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 Pfam PF12833 Helix-turn-helix domain 248 324 1.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 PANTHER PTHR11019 223 324 1.2E-30 T 23-04-2016 NIAKO_RS02920 31585989e09ca2bf39f858ca294136c5 328 SUPERFAMILY SSF46689 226 276 1.97E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36635 69c175dd240cbbb03dc94ee80562750e 231 Pfam PF04765 Protein of unknown function (DUF616) 66 212 2.0E-27 T 23-04-2016 IPR006852 Protein of unknown function DUF616 NIAKO_RS36635 69c175dd240cbbb03dc94ee80562750e 231 PANTHER PTHR12956:SF17 79 217 2.5E-14 T 23-04-2016 NIAKO_RS36635 69c175dd240cbbb03dc94ee80562750e 231 PANTHER PTHR12956 79 217 2.5E-14 T 23-04-2016 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 PANTHER PTHR11921 8 248 3.4E-117 T 23-04-2016 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 PANTHER PTHR11921:SF13 8 248 3.4E-117 T 23-04-2016 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 63 71 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 SUPERFAMILY SSF54292 5 121 1.13E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 13 236 2.8E-28 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 Pfam PF13183 4Fe-4S dicluster domain 162 233 6.6E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 Gene3D G3DSA:3.10.20.30 3 115 1.1E-29 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 SUPERFAMILY SSF46548 124 247 2.44E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 125 7.6E-26 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NIAKO_RS04370 b017c033e3ce80c66b49e90a9f0b6e61 254 Gene3D G3DSA:1.10.1060.10 116 248 1.6E-18 T 23-04-2016 NIAKO_RS29935 d896b8d475ebca4473e738745083ce73 425 PANTHER PTHR10283 3 425 4.1E-150 T 23-04-2016 NIAKO_RS29935 d896b8d475ebca4473e738745083ce73 425 Pfam PF03600 Citrate transporter 13 373 2.2E-34 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 NIAKO_RS29935 d896b8d475ebca4473e738745083ce73 425 PANTHER PTHR10283:SF103 3 425 4.1E-150 T 23-04-2016 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Gene3D G3DSA:4.10.320.10 88 129 1.6E-17 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Gene3D G3DSA:2.40.50.100 1 83 8.0E-24 T 23-04-2016 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Pfam PF02817 e3 binding domain 89 124 4.3E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 SUPERFAMILY SSF47005 88 128 7.19E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Pfam PF00364 Biotin-requiring enzyme 3 75 5.8E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Gene3D G3DSA:3.30.559.10 141 359 5.6E-51 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 142 359 3.7E-54 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 PANTHER PTHR23151 1 359 1.7E-72 T 23-04-2016 NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 SUPERFAMILY SSF51230 1 83 3.8E-21 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS11290 6e3f5d33b4d98cba9ad29d932a6e573c 359 SUPERFAMILY SSF52777 142 359 1.69E-50 T 23-04-2016 NIAKO_RS23750 e3e46dcf140c1d6f96778fbeb3f04845 147 SMART SM00226 18 146 2.2E-4 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS23750 e3e46dcf140c1d6f96778fbeb3f04845 147 Gene3D G3DSA:3.40.50.270 17 101 1.1E-11 T 23-04-2016 NIAKO_RS23750 e3e46dcf140c1d6f96778fbeb3f04845 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 20 101 1.4E-8 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS23750 e3e46dcf140c1d6f96778fbeb3f04845 147 SUPERFAMILY SSF52788 18 112 9.16E-13 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NIAKO_RS25320 4a3ff28e3849c4a165d55ea7ba9932f3 371 Gene3D G3DSA:2.40.170.20 31 89 4.1E-5 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25320 4a3ff28e3849c4a165d55ea7ba9932f3 371 Gene3D G3DSA:2.40.170.20 210 320 4.1E-5 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25320 4a3ff28e3849c4a165d55ea7ba9932f3 371 SUPERFAMILY SSF56935 78 350 2.15E-6 T 23-04-2016 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 SMART SM00850 141 232 3.0E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 Gene3D G3DSA:3.40.50.2300 1 125 1.2E-26 T 23-04-2016 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 Pfam PF00072 Response regulator receiver domain 6 109 3.8E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 Gene3D G3DSA:2.40.50.40 133 200 1.0E-20 T 23-04-2016 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 SMART SM00448 3 111 5.7E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 Pfam PF04397 LytTr DNA-binding domain 142 229 2.4E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 SUPERFAMILY SSF52172 3 122 2.42E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03135 f8a74ca70b977d4fb94c5e748c721c57 239 PANTHER PTHR26402 3 110 1.1E-29 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.60.40.1120 30 120 3.1E-16 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1051 2.2E-230 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Pfam PF13715 CarboxypepD_reg-like domain 30 112 2.3E-17 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.40.170.20 227 261 4.7E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.40.170.20 299 375 4.7E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.40.170.20 408 778 4.7E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.40.170.20 937 1012 4.7E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.40.170.20 862 887 4.7E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 200 230 3.8E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF49464 28 107 1.83E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Gene3D G3DSA:2.170.130.10 121 226 4.0E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 485 516 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 551 774 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 428 466 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 797 1009 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 1 344 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532:SF57 1028 1049 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF56935 108 248 5.04E-87 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF56935 945 1002 5.04E-87 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF56935 853 897 5.04E-87 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF56935 413 766 5.04E-87 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 SUPERFAMILY SSF56935 290 378 5.04E-87 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 485 516 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 551 774 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 428 466 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 797 1009 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 1 344 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 PANTHER PTHR11532 1028 1049 1.7E-218 T 23-04-2016 NIAKO_RS08165 6cfdd0c8c1d2134e33f61877ad424a2f 1051 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 224 2.5E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 Pfam PF00072 Response regulator receiver domain 9 120 3.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 SMART SM00421 155 212 1.3E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 4.1E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 SMART SM00448 7 120 8.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 Gene3D G3DSA:3.40.50.2300 7 161 1.7E-32 T 23-04-2016 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 Gene3D G3DSA:1.10.10.10 162 218 1.7E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 PANTHER PTHR26402:SF151 7 216 2.5E-53 T 23-04-2016 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 PANTHER PTHR26402 7 216 2.5E-53 T 23-04-2016 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 SUPERFAMILY SSF46894 150 218 5.44E-13 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS25055 2c6f37a535135d39fb5c147f68f577a0 219 SUPERFAMILY SSF52172 7 136 3.27E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06375 8217af2687bd47004cb4d77490dbbd8d 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 135 2.1E-9 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS06375 8217af2687bd47004cb4d77490dbbd8d 141 PANTHER PTHR33990 1 140 3.2E-40 T 23-04-2016 NIAKO_RS06375 8217af2687bd47004cb4d77490dbbd8d 141 Gene3D G3DSA:3.10.180.10 8 139 2.7E-38 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS06375 8217af2687bd47004cb4d77490dbbd8d 141 PANTHER PTHR33990:SF1 1 140 3.2E-40 T 23-04-2016 NIAKO_RS06375 8217af2687bd47004cb4d77490dbbd8d 141 SUPERFAMILY SSF54593 4 139 6.36E-29 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Pfam PF16326 ABC transporter C-terminal domain 597 668 2.8E-8 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 SUPERFAMILY SSF52540 5 82 6.82E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 SUPERFAMILY SSF52540 136 272 6.82E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 PANTHER PTHR19211 5 572 2.7E-211 T 23-04-2016 NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Gene3D G3DSA:3.40.50.300 129 282 2.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Gene3D G3DSA:3.40.50.300 329 537 7.4E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Gene3D G3DSA:3.40.50.300 6 89 2.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 SMART SM00382 355 521 1.4E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 SMART SM00382 27 247 2.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 SUPERFAMILY SSF52540 313 532 1.02E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Pfam PF12848 ABC transporter 234 317 7.7E-24 T 23-04-2016 IPR032781 ABC-transporter extension domain NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Pfam PF00005 ABC transporter 19 195 6.2E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS10800 13fb44a19c241ec1d4a2134f7de287d8 670 Pfam PF00005 ABC transporter 349 476 4.0E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS02450 89b7aaaea666c6b923e98df198a6b35d 295 PANTHER PTHR14194 1 259 8.3E-31 T 23-04-2016 NIAKO_RS02450 89b7aaaea666c6b923e98df198a6b35d 295 Gene3D G3DSA:3.40.50.720 1 205 8.0E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02450 89b7aaaea666c6b923e98df198a6b35d 295 Pfam PF05368 NmrA-like family 3 223 7.5E-14 T 23-04-2016 IPR008030 NmrA-like domain NIAKO_RS02450 89b7aaaea666c6b923e98df198a6b35d 295 SUPERFAMILY SSF51735 1 275 7.85E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 PANTHER PTHR21600:SF23 128 188 5.1E-61 T 23-04-2016 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 PANTHER PTHR21600:SF23 3 110 5.1E-61 T 23-04-2016 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 SUPERFAMILY SSF55120 3 188 1.58E-39 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 Pfam PF00849 RNA pseudouridylate synthase 4 154 5.7E-16 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 40 54 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 184 2.8E-46 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 PANTHER PTHR21600 128 188 5.1E-61 T 23-04-2016 NIAKO_RS32615 838a9c6dc14c7e069dd22406c4f0be79 194 PANTHER PTHR21600 3 110 5.1E-61 T 23-04-2016 NIAKO_RS26375 a0851420eb8612d62382789dc7145ca5 506 SUPERFAMILY SSF51126 292 435 3.88E-13 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26375 a0851420eb8612d62382789dc7145ca5 506 SUPERFAMILY SSF51126 76 209 3.88E-13 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 5 107 1.0E-28 T 23-04-2016 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 PANTHER PTHR33745:SF1 144 282 1.2E-57 T 23-04-2016 NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 SUPERFAMILY SSF52091 160 270 1.22E-17 T 23-04-2016 IPR002645 STAS domain NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 PANTHER PTHR33745 144 282 1.2E-57 T 23-04-2016 NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 Pfam PF01740 STAS domain 163 254 4.2E-9 T 23-04-2016 IPR002645 STAS domain NIAKO_RS14740 fabfd89f74c847223d6bd6ae71b92b8c 285 Gene3D G3DSA:3.30.750.24 161 253 1.1E-14 T 23-04-2016 IPR002645 STAS domain NIAKO_RS06300 125c0c238f082646ab643a019ce2a3b5 196 Gene3D G3DSA:3.10.450.50 64 183 8.3E-4 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 Pfam PF01022 Bacterial regulatory protein, arsR family 11 55 7.3E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 PANTHER PTHR33154 1 94 8.3E-22 T 23-04-2016 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 SMART SM00418 4 85 1.1E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 PANTHER PTHR33154:SF6 1 94 8.3E-22 T 23-04-2016 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 Gene3D G3DSA:1.10.10.10 4 99 5.9E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 SUPERFAMILY SSF46785 4 94 4.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 6 21 3.3E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 3.3E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS27610 bf915f317214721a81525755665faaa5 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 3.3E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 Pfam PF00072 Response regulator receiver domain 3 111 8.2E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 Gene3D G3DSA:3.40.50.2300 1 119 1.6E-16 T 23-04-2016 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 PANTHER PTHR26402:SF501 1 119 1.4E-15 T 23-04-2016 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 Gene3D G3DSA:2.40.50.40 146 211 3.4E-7 T 23-04-2016 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 Pfam PF04397 LytTr DNA-binding domain 155 252 1.4E-9 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 SMART SM00448 1 111 1.2E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 SMART SM00850 154 253 1.8E-13 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 SUPERFAMILY SSF52172 1 132 3.98E-18 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20740 e0d878e1811dee87f16f18c84f103896 254 PANTHER PTHR26402 1 119 1.4E-15 T 23-04-2016 NIAKO_RS13755 fb61d2081a32dda356bca81f2f70d002 606 Pfam PF07980 SusD family 321 606 2.1E-50 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13755 fb61d2081a32dda356bca81f2f70d002 606 Pfam PF14322 Starch-binding associating with outer membrane 90 228 2.7E-18 T 23-04-2016 NIAKO_RS13755 fb61d2081a32dda356bca81f2f70d002 606 Gene3D G3DSA:1.25.40.10 436 527 1.7E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13755 fb61d2081a32dda356bca81f2f70d002 606 Gene3D G3DSA:1.25.40.10 208 349 1.7E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13755 fb61d2081a32dda356bca81f2f70d002 606 SUPERFAMILY SSF48452 17 606 1.77E-97 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21305 46b084a23126138de6b12c3acf0d101f 309 Pfam PF02517 CAAX protease self-immunity 223 292 1.9E-5 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 NIAKO_RS33425 b546fee0d46f3f309e901b71e694ab83 67 SMART SM00530 8 63 3.1E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS33425 b546fee0d46f3f309e901b71e694ab83 67 PANTHER PTHR10245 5 59 7.0E-12 T 23-04-2016 NIAKO_RS33425 b546fee0d46f3f309e901b71e694ab83 67 SUPERFAMILY SSF47413 3 64 8.73E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS33425 b546fee0d46f3f309e901b71e694ab83 67 Gene3D G3DSA:1.10.260.40 3 65 7.9E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS33425 b546fee0d46f3f309e901b71e694ab83 67 Pfam PF13560 Helix-turn-helix domain 4 59 1.3E-13 T 23-04-2016 NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 Pfam PF04183 IucA / IucC family 160 396 7.3E-56 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 PANTHER PTHR34384 16 612 9.0E-110 T 23-04-2016 NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 Pfam PF06276 Ferric iron reductase FhuF-like transporter 428 587 9.0E-20 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 SMART SM01006 636 685 1.4E-13 T 23-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 Gene3D G3DSA:3.40.630.30 615 801 3.5E-46 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 SUPERFAMILY SSF55729 612 796 3.51E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 PANTHER PTHR34384:SF4 16 612 9.0E-110 T 23-04-2016 NIAKO_RS13600 35cc2dd6b197232157908d07c2cf8036 811 Pfam PF13523 Acetyltransferase (GNAT) domain 639 781 8.4E-37 T 23-04-2016 NIAKO_RS35635 7514ad13c0d7a29c83bcf28298be01c2 124 PANTHER PTHR33204 1 117 1.3E-43 T 23-04-2016 NIAKO_RS35635 7514ad13c0d7a29c83bcf28298be01c2 124 Gene3D G3DSA:1.10.10.10 2 121 2.0E-47 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35635 7514ad13c0d7a29c83bcf28298be01c2 124 SUPERFAMILY SSF46785 9 119 1.06E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35635 7514ad13c0d7a29c83bcf28298be01c2 124 Pfam PF01638 HxlR-like helix-turn-helix 24 110 3.8E-31 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS35635 7514ad13c0d7a29c83bcf28298be01c2 124 PANTHER PTHR33204:SF15 1 117 1.3E-43 T 23-04-2016 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 Gene3D G3DSA:2.115.10.20 26 318 2.0E-54 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 Pfam PF00754 F5/8 type C domain 356 454 1.5E-12 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 SUPERFAMILY SSF75005 14 307 1.96E-54 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 PANTHER PTHR22925:SF3 149 454 5.4E-63 T 23-04-2016 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 PANTHER PTHR22925:SF3 25 132 5.4E-63 T 23-04-2016 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 Gene3D G3DSA:2.60.120.260 357 466 1.2E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 Pfam PF04616 Glycosyl hydrolases family 43 25 307 5.5E-40 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 PANTHER PTHR22925 25 132 5.4E-63 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 PANTHER PTHR22925 149 454 5.4E-63 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17375 9b81087a0650e094a153a908d6be3f1d 470 SUPERFAMILY SSF49785 358 465 3.33E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 SUPERFAMILY SSF82693 268 325 1.86E-20 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 SUPERFAMILY SSF82714 183 265 2.88E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 SUPERFAMILY SSF82693 44 128 1.73E-22 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PANTHER PTHR32063 2 424 8.8E-222 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 Pfam PF00873 AcrB/AcrD/AcrF family 6 422 1.8E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PANTHER PTHR32063:SF19 2 424 8.8E-222 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 SUPERFAMILY SSF82693 138 182 1.86E-20 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 Gene3D G3DSA:3.30.70.1430 45 142 2.7E-25 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 Gene3D G3DSA:3.30.2090.10 183 265 1.2E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.5E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.5E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.5E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.5E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 SUPERFAMILY SSF82866 291 416 3.66E-25 T 23-04-2016 NIAKO_RS30580 fec5f73503649cc30fd2be4dc8743a6d 426 Gene3D G3DSA:1.10.3850.10 273 417 9.8E-40 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 Gene3D G3DSA:1.50.10.10 104 309 2.7E-19 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 SUPERFAMILY SSF48208 99 426 1.53E-31 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151 257 500 7.2E-222 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151 516 671 7.2E-222 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151 9 241 7.2E-222 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 34 580 5.3E-166 T 23-04-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151:SF1 257 500 7.2E-222 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151:SF1 516 671 7.2E-222 T 23-04-2016 NIAKO_RS04940 9eb0463d30692c08de0c28b3fd6a923a 671 PANTHER PTHR31151:SF1 9 241 7.2E-222 T 23-04-2016 NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Pfam PF13604 AAA domain 411 601 5.3E-48 T 23-04-2016 NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Pfam PF08751 TrwC relaxase 10 287 2.3E-63 T 23-04-2016 IPR014862 TrwC relaxase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SUPERFAMILY SSF52540 518 583 1.56E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SUPERFAMILY SSF52540 728 847 1.56E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SUPERFAMILY SSF52540 617 649 1.56E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Gene3D G3DSA:3.40.50.300 405 587 7.6E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SUPERFAMILY SSF52540 408 541 8.62E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SUPERFAMILY SSF55464 3 292 3.85E-47 T 23-04-2016 NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Pfam PF13538 UvrD-like helicase C-terminal domain 793 840 1.0E-7 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Gene3D G3DSA:3.40.50.300 617 650 2.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 Gene3D G3DSA:3.40.50.300 786 853 2.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS16730 1dbf8e066753b0339ae65bb52954f2e4 904 SMART SM00382 427 563 4.2E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 137 1179 3.1E-270 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Gene3D G3DSA:2.60.40.1120 137 227 1.8E-17 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Pfam PF13715 CarboxypepD_reg-like domain 138 219 1.3E-19 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 555 608 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 655 790 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 432 510 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 1094 1142 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 823 930 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 1003 1049 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF56935 217 362 3.07E-64 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Gene3D G3DSA:2.40.170.20 431 510 2.0E-9 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Gene3D G3DSA:2.40.170.20 545 606 2.0E-9 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Gene3D G3DSA:2.40.170.20 641 928 2.0E-9 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532 674 1177 5.4E-284 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532 505 569 5.4E-284 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532 136 486 5.4E-284 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Gene3D G3DSA:2.170.130.10 228 342 5.4E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 Pfam PF07715 TonB-dependent Receptor Plug Domain 227 333 5.2E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 SUPERFAMILY SSF49464 136 217 1.96E-18 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 309 339 3.5E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532:SF57 674 1177 5.4E-284 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532:SF57 505 569 5.4E-284 T 23-04-2016 NIAKO_RS14615 f23371ef652def8d3e8da950dc64d7b7 1179 PANTHER PTHR11532:SF57 136 486 5.4E-284 T 23-04-2016 NIAKO_RS15830 62f5cba98c132047a52dd87078ff9087 259 Pfam PF04116 Fatty acid hydroxylase superfamily 88 225 1.3E-28 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS15830 62f5cba98c132047a52dd87078ff9087 259 PANTHER PTHR11863:SF2 11 235 1.8E-25 T 23-04-2016 NIAKO_RS15830 62f5cba98c132047a52dd87078ff9087 259 PANTHER PTHR11863 11 235 1.8E-25 T 23-04-2016 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:1.10.3500.10 110 312 3.6E-92 T 23-04-2016 IPR023323 Tex-like domain NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:1.10.3500.10 439 486 3.6E-92 T 23-04-2016 IPR023323 Tex-like domain NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SUPERFAMILY SSF158832 3 310 7.85E-101 T 23-04-2016 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SUPERFAMILY SSF53098 312 457 2.43E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:1.10.10.650 2 109 2.2E-36 T 23-04-2016 IPR023319 Tex-like protein, HTH domain NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:1.10.150.310 487 618 1.1E-52 T 23-04-2016 IPR023097 Tex RuvX-like domain NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SUPERFAMILY SSF47781 548 619 4.22E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SUPERFAMILY SSF50249 622 709 4.1E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 PANTHER PTHR10724:SF1 1 728 2.5E-302 T 23-04-2016 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Pfam PF16921 Tex protein YqgF-like domain 316 438 5.3E-45 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Pfam PF12836 Helix-hairpin-helix motif 479 543 4.1E-28 T 23-04-2016 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SMART SM00732 316 412 2.1E-22 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SMART SM00316 637 708 1.5E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Pfam PF00575 S1 RNA binding domain 637 708 3.0E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Pfam PF09371 Tex-like protein N-terminal domain 9 191 7.1E-64 T 23-04-2016 IPR018974 Tex-like protein, N-terminal NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 SUPERFAMILY SSF47781 458 545 4.11E-29 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:3.30.420.140 316 438 7.5E-46 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 Gene3D G3DSA:2.40.50.140 624 709 4.6E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22180 836be6befbe27a3cb81588548cd55dc6 759 PANTHER PTHR10724 1 728 2.5E-302 T 23-04-2016 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 PANTHER PTHR30387:SF2 1 383 1.6E-143 T 23-04-2016 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 PIRSF PIRSF016049 1 384 2.7E-162 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 Gene3D G3DSA:3.20.20.150 1 381 1.6E-137 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 SUPERFAMILY SSF51658 1 377 1.42E-77 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 PANTHER PTHR30387 1 383 1.6E-143 T 23-04-2016 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 379 3.3E-133 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 381 7.4E-160 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS03680 27882d4b283714db6575d83ac5b4addc 385 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 385 187.904 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS20185 ed49847bad3fef13a6463ec86dc884a1 161 Pfam PF07291 Methylamine utilisation protein MauE 25 117 3.3E-6 T 23-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 67 213 6.2E-31 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 10 357 8.5E-149 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PANTHER PTHR30013:SF6 6 372 2.2E-203 T 23-04-2016 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PANTHER PTHR30013 6 372 2.2E-203 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 Gene3D G3DSA:3.40.50.700 55 231 1.4E-60 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 232 312 2.9E-31 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 Gene3D G3DSA:4.10.480.10 232 315 1.7E-37 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 SUPERFAMILY SSF56770 52 315 2.35E-91 T 23-04-2016 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PIRSF PIRSF000310 10 361 1.1E-143 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 75 99 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 52 74 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 164 188 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 261 287 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 255 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 193 216 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 121 144 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 219 236 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS06210 5a053408f970e363bc26ad1917fe7887 380 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 289 302 1.5E-103 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 SMART SM01329 2 334 6.8E-142 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 PANTHER PTHR11835 1 346 1.0E-147 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 SUPERFAMILY SSF53659 1 337 4.86E-113 T 23-04-2016 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 Gene3D G3DSA:3.40.718.10 2 343 1.8E-123 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 PANTHER PTHR11835:SF34 1 346 1.0E-147 T 23-04-2016 NIAKO_RS33815 beb7766a10360c8edd9c725301360602 483 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 334 5.8E-94 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 SMART SM00228 264 341 9.2E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 SMART SM00245 343 554 2.5E-49 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 SUPERFAMILY SSF50156 237 353 4.51E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Gene3D G3DSA:3.30.750.44 220 270 4.4E-4 T 23-04-2016 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Gene3D G3DSA:3.90.226.10 682 707 4.7E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Gene3D G3DSA:3.90.226.10 352 556 4.7E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 264 338 5.9E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Gene3D G3DSA:2.30.42.10 271 351 2.6E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Pfam PF03572 Peptidase family S41 372 552 5.5E-46 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 PANTHER PTHR32060:SF11 44 625 4.9E-143 T 23-04-2016 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 PANTHER PTHR32060 44 625 4.9E-143 T 23-04-2016 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 558 704 7.8E-28 T 23-04-2016 IPR020992 Tail specific protease, C-terminal NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 226 574 3.7E-87 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 SUPERFAMILY SSF52096 212 282 2.15E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS07990 1263fb172a7cb39439467a51194bb3b3 717 SUPERFAMILY SSF52096 366 566 2.15E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 Gene3D G3DSA:3.30.70.940 5 102 2.3E-13 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 PANTHER PTHR30265:SF3 1 165 2.0E-27 T 23-04-2016 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 Gene3D G3DSA:2.30.30.30 111 163 7.8E-7 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 SUPERFAMILY SSF82679 5 103 1.7E-24 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 Pfam PF02357 Transcription termination factor nusG 5 97 1.4E-19 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 PANTHER PTHR30265 1 165 2.0E-27 T 23-04-2016 NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 SUPERFAMILY SSF50104 106 167 2.51E-6 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS00385 d002fcee7d967444b77b7e429533148f 182 SMART SM00738 4 101 1.5E-8 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS01580 7f1aa61834331049e4d3f669d9fd4be0 262 Pfam PF03793 PASTA domain 182 226 1.1E-5 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01580 7f1aa61834331049e4d3f669d9fd4be0 262 Pfam PF03793 PASTA domain 39 101 1.1E-8 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01580 7f1aa61834331049e4d3f669d9fd4be0 262 SMART SM00740 103 173 0.64 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01580 7f1aa61834331049e4d3f669d9fd4be0 262 SMART SM00740 34 101 3.2E-10 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS01580 7f1aa61834331049e4d3f669d9fd4be0 262 SMART SM00740 176 246 0.032 T 23-04-2016 IPR005543 PASTA domain NIAKO_RS25410 a3e84631ac4d6555ff50b1f6f8144cbf 473 PIRSF PIRSF016636 1 473 3.0E-145 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB NIAKO_RS25410 a3e84631ac4d6555ff50b1f6f8144cbf 473 PANTHER PTHR13285:SF24 3 448 2.2E-120 T 23-04-2016 NIAKO_RS25410 a3e84631ac4d6555ff50b1f6f8144cbf 473 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 151 365 2.4E-28 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT NIAKO_RS25410 a3e84631ac4d6555ff50b1f6f8144cbf 473 PIRSF PIRSF500217 1 473 1.3E-147 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 NIAKO_RS25410 a3e84631ac4d6555ff50b1f6f8144cbf 473 PANTHER PTHR13285 3 448 2.2E-120 T 23-04-2016 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 PANTHER PTHR11601:SF20 5 376 1.1E-127 T 23-04-2016 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 PIRSF PIRSF005572 2 376 1.2E-108 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 Gene3D G3DSA:3.90.1150.10 255 366 3.1E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 Gene3D G3DSA:3.40.640.10 17 254 2.7E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 SUPERFAMILY SSF53383 4 375 8.84E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 PANTHER PTHR11601 5 376 1.1E-127 T 23-04-2016 NIAKO_RS20545 b666910de3797aa5cf8b6007bb5e7b62 376 Pfam PF00266 Aminotransferase class-V 5 366 6.9E-73 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS30570 9f2d4b19ae71da5ab339e0a7ad1edaa3 419 Pfam PF02321 Outer membrane efflux protein 26 213 9.9E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS30570 9f2d4b19ae71da5ab339e0a7ad1edaa3 419 Gene3D G3DSA:1.20.1600.10 19 416 5.2E-33 T 23-04-2016 NIAKO_RS30570 9f2d4b19ae71da5ab339e0a7ad1edaa3 419 SUPERFAMILY SSF56954 2 416 7.72E-41 T 23-04-2016 NIAKO_RS25980 42db7676d642345828045538a3b1e42c 158 SUPERFAMILY SSF46626 61 155 1.92E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS25980 42db7676d642345828045538a3b1e42c 158 SUPERFAMILY SSF46626 1 17 1.92E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS25980 42db7676d642345828045538a3b1e42c 158 Pfam PF00034 Cytochrome c 67 153 1.4E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS25980 42db7676d642345828045538a3b1e42c 158 Gene3D G3DSA:1.10.760.10 69 152 5.5E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 Gene3D G3DSA:2.60.40.10 200 286 7.0E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 SUPERFAMILY SSF51126 316 582 8.52E-7 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 SUPERFAMILY SSF49265 198 287 2.18E-17 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 SMART SM00060 202 275 4.1E-10 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 Pfam PF13313 Domain of unknown function (DUF4082) 50 187 4.2E-43 T 23-04-2016 IPR025141 Domain of unknown function DUF4082 NIAKO_RS09040 34e6c32ada67efe00b9079b8a8f6603b 601 Pfam PF00041 Fibronectin type III domain 204 273 1.4E-7 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 PANTHER PTHR11361 184 421 8.4E-45 T 23-04-2016 NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 SUPERFAMILY SSF48334 4 140 8.11E-8 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 Gene3D G3DSA:3.40.50.300 220 427 2.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 SMART SM00534 254 435 1.1E-18 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 Pfam PF00488 MutS domain V 258 421 7.4E-33 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 SUPERFAMILY SSF52540 220 428 2.74E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27310 e060e75b94d2378a3b1f9526f5b95ac6 437 Gene3D G3DSA:1.10.1420.10 1 67 4.9E-7 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Gene3D G3DSA:2.60.40.10 607 687 1.1E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 SUPERFAMILY SSF110296 280 525 6.41E-37 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 709 779 2.3E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 SUPERFAMILY SSF110296 461 661 9.42E-20 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Pfam PF14870 Photosynthesis system II assembly factor YCF48 150 234 1.8E-14 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Pfam PF14870 Photosynthesis system II assembly factor YCF48 314 399 1.6E-10 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Pfam PF14870 Photosynthesis system II assembly factor YCF48 449 526 1.4E-10 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 SUPERFAMILY SSF110296 28 274 5.58E-35 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Gene3D G3DSA:2.130.10.140 186 307 1.1E-13 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Gene3D G3DSA:2.130.10.140 308 564 6.3E-31 T 23-04-2016 NIAKO_RS02390 85407bc51e666557811724f1ac1336de 779 Gene3D G3DSA:2.130.10.140 20 185 5.8E-17 T 23-04-2016 NIAKO_RS02575 163dcf9b4a4aa5472ff66ec5ff63ea2e 412 SUPERFAMILY SSF89550 62 285 2.26E-27 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS02575 163dcf9b4a4aa5472ff66ec5ff63ea2e 412 Gene3D G3DSA:3.20.20.140 62 151 5.2E-13 T 23-04-2016 NIAKO_RS02575 163dcf9b4a4aa5472ff66ec5ff63ea2e 412 Gene3D G3DSA:3.20.20.140 255 295 5.2E-13 T 23-04-2016 NIAKO_RS02575 163dcf9b4a4aa5472ff66ec5ff63ea2e 412 Pfam PF02811 PHP domain 66 132 3.8E-6 T 23-04-2016 IPR004013 PHP domain GO:0003824 NIAKO_RS02575 163dcf9b4a4aa5472ff66ec5ff63ea2e 412 SMART SM00481 65 137 4.9E-5 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PANTHER PTHR11540 1 304 1.6E-118 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PIRSF PIRSF000102 1 308 3.1E-99 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 Gene3D G3DSA:3.90.110.10 146 303 2.9E-51 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 Hamap MF_00487 Malate dehydrogenase [mdh]. 1 307 37.939 T 23-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 1 306 5.6E-107 T 23-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 SUPERFAMILY SSF56327 143 306 4.32E-45 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 SUPERFAMILY SSF51735 1 142 1.82E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 Gene3D G3DSA:3.40.50.720 1 144 5.0E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 142 2.8E-41 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PANTHER PTHR11540:SF16 1 304 1.6E-118 T 23-04-2016 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 5.5E-31 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 5.5E-31 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 5.5E-31 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 5.5E-31 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 5.5E-31 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NIAKO_RS01505 c867e90da048f1cbe489ae7f28a96d96 309 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 301 4.9E-25 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 PANTHER PTHR10000 22 282 2.3E-46 T 23-04-2016 NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 PANTHER PTHR10000:SF8 22 282 2.3E-46 T 23-04-2016 NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 28 278 2.9E-43 T 23-04-2016 IPR000150 Cof protein GO:0016787 NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 28 278 1.0E-50 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 SUPERFAMILY SSF56784 23 282 3.37E-55 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 27 251 7.5E-20 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 Gene3D G3DSA:3.40.50.1000 19 96 1.4E-42 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 Gene3D G3DSA:3.40.50.1000 197 282 1.4E-42 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS31785 fdf7457310266a1cb421c903e7453398 283 Gene3D G3DSA:3.30.1240.10 106 196 6.8E-13 T 23-04-2016 NIAKO_RS10165 789cd82dc66f9f8a7d722c4df12bdb1c 459 SUPERFAMILY SSF48452 171 332 1.77E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10165 789cd82dc66f9f8a7d722c4df12bdb1c 459 Gene3D G3DSA:1.25.40.10 367 379 1.4E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10165 789cd82dc66f9f8a7d722c4df12bdb1c 459 Gene3D G3DSA:1.25.40.10 22 60 1.4E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10165 789cd82dc66f9f8a7d722c4df12bdb1c 459 Gene3D G3DSA:1.25.40.10 127 331 1.4E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 SUPERFAMILY SSF75217 94 239 4.38E-30 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 SUPERFAMILY SSF55315 5 91 9.18E-14 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 SMART SM00967 26 94 6.8E-5 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 Gene3D G3DSA:3.40.1280.10 100 240 3.9E-35 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 Gene3D G3DSA:3.30.1330.30 1 91 1.3E-22 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 Pfam PF00588 SpoU rRNA Methylase family 103 238 1.9E-30 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NIAKO_RS09900 117643e4dcac94d07e1ac368cfe54bfb 245 PANTHER PTHR12029 5 238 3.8E-41 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 Gene3D G3DSA:1.20.1050.60 363 455 3.5E-29 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 Pfam PF07971 Glycosyl hydrolase family 92 255 738 1.2E-167 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 741 2.8E-163 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 SUPERFAMILY SSF48208 272 726 8.33E-22 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 Gene3D G3DSA:1.20.1610.10 462 603 1.4E-50 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 Gene3D G3DSA:2.70.98.10 21 337 1.8E-85 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 PANTHER PTHR12143 3 387 7.9E-171 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 PANTHER PTHR12143 403 748 7.9E-171 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 Gene3D G3DSA:3.30.2080.10 604 747 3.3E-59 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 PANTHER PTHR12143:SF22 3 387 7.9E-171 T 23-04-2016 NIAKO_RS35875 b18cb5da8c4f751b91d10100fe20b57a 756 PANTHER PTHR12143:SF22 403 748 7.9E-171 T 23-04-2016 NIAKO_RS15970 4f0b1581df08ad345617824fff38aeee 277 Gene3D G3DSA:3.20.20.80 5 254 5.1E-12 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15970 4f0b1581df08ad345617824fff38aeee 277 SUPERFAMILY SSF51445 11 251 3.79E-15 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SMART SM00450 259 357 7.9E-6 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SMART SM00450 365 460 1.4E-17 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Pfam PF00581 Rhodanese-like domain 365 456 1.0E-11 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Pfam PF00581 Rhodanese-like domain 264 354 4.2E-9 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 PANTHER PTHR11935 3 243 3.2E-94 T 23-04-2016 NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Gene3D G3DSA:3.40.250.10 361 468 6.4E-25 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Gene3D G3DSA:3.40.250.10 241 358 2.7E-16 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SUPERFAMILY SSF56281 1 241 3.11E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SMART SM00849 12 182 3.4E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SUPERFAMILY SSF52821 236 359 1.27E-17 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Pfam PF00753 Metallo-beta-lactamase superfamily 15 175 1.2E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 SUPERFAMILY SSF52821 360 458 7.99E-24 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 PANTHER PTHR11935:SF9 3 243 3.2E-94 T 23-04-2016 NIAKO_RS32085 33511b2265fca1368b649dd668df90e6 472 Gene3D G3DSA:3.60.15.10 4 240 2.0E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS35505 657429f268c43d6808025be2b496bb61 358 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 25 355 24.591 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS35505 657429f268c43d6808025be2b496bb61 358 PANTHER PTHR11432:SF3 7 354 3.4E-149 T 23-04-2016 NIAKO_RS35505 657429f268c43d6808025be2b496bb61 358 PANTHER PTHR11432 7 354 3.4E-149 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS35505 657429f268c43d6808025be2b496bb61 358 Pfam PF00146 NADH dehydrogenase 33 348 2.6E-122 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS35505 657429f268c43d6808025be2b496bb61 358 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 230 243 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 Gene3D G3DSA:2.160.20.10 9 338 2.3E-39 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SUPERFAMILY SSF51126 27 377 1.15E-49 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 Pfam PF05048 Periplasmic copper-binding protein (NosD) 158 359 2.5E-42 T 23-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 276 319 7.2E-6 T 23-04-2016 IPR022441 Parallel beta-helix repeat-2 NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 111 151 1.5E-5 T 23-04-2016 IPR022441 Parallel beta-helix repeat-2 NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 167 188 530.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 212 233 7800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 116 137 53.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 189 211 2500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 260 281 370.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 282 303 1700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 305 331 1400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 234 259 810.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 138 166 340.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 SMART SM00710 87 115 900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS25965 e8c6724a206297c528bf281f6fcbd954 410 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 33 407 6.3E-128 T 23-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD NIAKO_RS26490 5a1447a1b53015914cfe996f31825d9e 381 PANTHER PTHR33886 177 381 2.4E-49 T 23-04-2016 NIAKO_RS26490 5a1447a1b53015914cfe996f31825d9e 381 Gene3D G3DSA:1.50.10.10 36 380 1.1E-81 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS26490 5a1447a1b53015914cfe996f31825d9e 381 SUPERFAMILY SSF48208 60 381 8.39E-55 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26490 5a1447a1b53015914cfe996f31825d9e 381 Pfam PF07470 Glycosyl Hydrolase Family 88 60 381 3.6E-63 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS26490 5a1447a1b53015914cfe996f31825d9e 381 PANTHER PTHR33886:SF2 177 381 2.4E-49 T 23-04-2016 NIAKO_RS22670 b745df02f23b35f7f465ca34f3f2d503 335 SUPERFAMILY SSF117892 130 230 6.28E-7 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS22670 b745df02f23b35f7f465ca34f3f2d503 335 PANTHER PTHR37826:SF2 1 298 5.2E-74 T 23-04-2016 NIAKO_RS22670 b745df02f23b35f7f465ca34f3f2d503 335 Pfam PF09851 Short C-terminal domain 306 332 2.3E-7 T 23-04-2016 IPR018649 SHOCT domain NIAKO_RS22670 b745df02f23b35f7f465ca34f3f2d503 335 Pfam PF13421 SPFH domain-Band 7 family 26 234 1.9E-79 T 23-04-2016 NIAKO_RS22670 b745df02f23b35f7f465ca34f3f2d503 335 PANTHER PTHR37826 1 298 5.2E-74 T 23-04-2016 NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 PANTHER PTHR30329:SF4 47 280 2.6E-32 T 23-04-2016 NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 SUPERFAMILY SSF103088 159 276 7.46E-30 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 PANTHER PTHR30329 47 280 2.6E-32 T 23-04-2016 NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 Gene3D G3DSA:3.30.1330.60 149 274 1.7E-34 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 Pfam PF00691 OmpA family 169 268 1.9E-20 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS06715 48fe74b6a8d2d5c6e7eecd736d55e3d4 293 SUPERFAMILY SSF58100 43 148 3.92E-7 T 23-04-2016 NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 Pfam PF01928 CYTH domain 3 152 6.6E-11 T 23-04-2016 IPR023577 CYTH domain NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 SMART SM01118 2 149 4.3E-20 T 23-04-2016 IPR023577 CYTH domain NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 PIRSF PIRSF016487 1 156 3.9E-59 T 23-04-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 SUPERFAMILY SSF55154 1 149 2.29E-39 T 23-04-2016 IPR033469 CYTH-like domain NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 Gene3D G3DSA:2.40.320.10 1 152 3.9E-55 T 23-04-2016 IPR023577 CYTH domain NIAKO_RS26450 1e1523c986425492f09838065d8fc0d0 156 PANTHER PTHR40114 2 155 2.6E-42 T 23-04-2016 NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 PANTHER PTHR30273:SF2 1 85 4.7E-41 T 23-04-2016 NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 PANTHER PTHR30273:SF2 106 382 4.7E-41 T 23-04-2016 NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 Pfam PF16344 Domain of unknown function (DUF4974) 279 376 7.3E-13 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 PANTHER PTHR30273 1 85 4.7E-41 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 PANTHER PTHR30273 106 382 4.7E-41 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 Pfam PF04773 FecR protein 164 255 1.3E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS13080 07f516de734d231ae4ffd8e3adadba91 384 PIRSF PIRSF018266 4 381 1.8E-40 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS12445 9cf80d9473dac84ef66b7eb869ae5d10 1988 SUPERFAMILY SSF49299 507 631 4.84E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12445 9cf80d9473dac84ef66b7eb869ae5d10 1988 Gene3D G3DSA:2.60.40.670 454 540 2.0E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12445 9cf80d9473dac84ef66b7eb869ae5d10 1988 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1897 1988 2.1E-11 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS12445 9cf80d9473dac84ef66b7eb869ae5d10 1988 Pfam PF13585 C-terminal domain of CHU protein family 1896 1986 1.9E-16 T 23-04-2016 NIAKO_RS12445 9cf80d9473dac84ef66b7eb869ae5d10 1988 SUPERFAMILY SSF49299 417 540 2.06E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36860 8a7ae1e6cb1f02f6894284986b7ad821 132 Gene3D G3DSA:3.40.50.300 51 114 1.6E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36860 8a7ae1e6cb1f02f6894284986b7ad821 132 Pfam PF01695 IstB-like ATP binding protein 50 115 8.7E-11 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:1.10.10.60 1306 1351 8.2E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:2.120.10.30 484 575 1.1E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:2.120.10.30 374 476 9.6E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:2.120.10.30 183 251 4.3E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SMART SM00342 1269 1352 7.1E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SMART SM00387 949 1068 8.4E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF12833 Helix-turn-helix domain 1276 1352 1.1E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:2.120.10.30 252 341 1.6E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:2.120.10.30 35 164 1.2E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:3.30.565.10 889 1070 1.3E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SMART SM00448 1107 1219 1.1E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:1.10.287.130 829 888 3.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:3.40.50.2300 1103 1233 5.3E-42 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF47384 826 903 1.55E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF55874 892 1067 3.67E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423:SF487 380 418 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423:SF487 157 240 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423:SF487 823 1261 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423:SF487 40 106 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 950 1067 7.2E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF63829 485 656 1.11E-18 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07495 Y_Y_Y domain 720 783 6.1E-22 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF52172 1107 1235 5.41E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF63829 189 403 1.5E-18 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SMART SM00388 838 903 3.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1028 1046 2.4E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 993 1007 2.4E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1052 1065 2.4E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1021 2.4E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF63829 31 195 2.88E-11 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF00072 Response regulator receiver domain 1109 1219 8.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF46689 1305 1356 1.97E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Gene3D G3DSA:1.10.10.60 1248 1305 2.3E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 839 902 1.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 SUPERFAMILY SSF63829 406 476 7.85E-6 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423 380 418 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423 157 240 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423 823 1261 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 PANTHER PTHR24423 40 106 5.1E-138 T 23-04-2016 NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 502 522 6.6E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 222 244 0.0015 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 309 331 3.4E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 545 566 1.8E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 451 474 2.4E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 36 59 0.0015 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS12055 ff6896c360484dac6889e44bf3a09df5 1364 Pfam PF07494 Two component regulator propeller 81 104 7.2E-4 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS10890 1141a2b829733818847cb22a5b0bd104 234 Pfam PF01810 LysE type translocator 16 197 6.4E-10 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 SUPERFAMILY SSF51182 23 144 7.29E-9 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 SUPERFAMILY SSF51182 190 230 7.29E-9 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 Gene3D G3DSA:1.10.10.60 176 231 3.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 SMART SM00342 195 278 1.5E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 Pfam PF12833 Helix-turn-helix domain 201 280 2.6E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 Pfam PF02311 AraC-like ligand binding domain 23 71 1.1E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 SUPERFAMILY SSF46689 232 281 6.81E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 PANTHER PTHR11019:SF11 25 286 6.4E-32 T 23-04-2016 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 Gene3D G3DSA:2.60.120.280 23 90 2.4E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 Gene3D G3DSA:1.10.10.60 232 282 2.7E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18365 23d5f09c640f6a258efff89cf18fb4c0 286 PANTHER PTHR11019 25 286 6.4E-32 T 23-04-2016 NIAKO_RS23560 8d12908c63ad7dfa585b268a6cab640d 289 Gene3D G3DSA:2.60.200.20 153 283 3.5E-6 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 NIAKO_RS23560 8d12908c63ad7dfa585b268a6cab640d 289 Pfam PF00498 FHA domain 180 280 9.9E-5 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 NIAKO_RS23560 8d12908c63ad7dfa585b268a6cab640d 289 SUPERFAMILY SSF49879 150 286 1.28E-6 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 SUPERFAMILY SSF53649 267 609 2.88E-84 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 Pfam PF00245 Alkaline phosphatase 275 553 9.0E-46 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 Pfam PF00245 Alkaline phosphatase 568 608 8.0E-8 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 Gene3D G3DSA:3.40.720.10 262 609 3.2E-80 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PANTHER PTHR11596 202 613 5.8E-68 T 23-04-2016 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PANTHER PTHR11596:SF5 202 613 5.8E-68 T 23-04-2016 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PRINTS PR00113 Alkaline phosphatase signature 475 504 1.0E-22 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PRINTS PR00113 Alkaline phosphatase signature 402 412 1.0E-22 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PRINTS PR00113 Alkaline phosphatase signature 358 378 1.0E-22 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 PRINTS PR00113 Alkaline phosphatase signature 274 294 1.0E-22 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 SUPERFAMILY SSF51695 21 243 3.14E-15 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 Gene3D G3DSA:3.20.20.190 28 45 6.3E-10 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 Gene3D G3DSA:3.20.20.190 91 241 6.3E-10 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS17415 53c6226489964839a1123c992be4c91b 613 SMART SM00098 275 610 6.8E-19 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 Gene3D G3DSA:2.60.120.260 338 458 2.8E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 PANTHER PTHR33307:SF5 4 860 3.5E-280 T 23-04-2016 NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 PIRSF PIRSF010631 2 869 7.0E-292 T 23-04-2016 IPR016007 Alpha-L-rhamnosidase NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 Gene3D G3DSA:2.60.120.260 136 229 5.3E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 PANTHER PTHR33307 4 860 3.5E-280 T 23-04-2016 NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 SUPERFAMILY SSF49785 139 236 2.98E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 SUPERFAMILY SSF48208 461 856 1.36E-46 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 164 335 4.4E-59 T 23-04-2016 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal NIAKO_RS24540 3f3492d90f0edd5bfe1b75679f8f23c2 871 Pfam PF05592 Bacterial alpha-L-rhamnosidase 344 854 4.1E-168 T 23-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 Gene3D G3DSA:2.170.130.10 249 378 1.9E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 Pfam PF07715 TonB-dependent Receptor Plug Domain 243 370 1.1E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 Gene3D G3DSA:2.60.40.1120 152 244 5.6E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532:SF57 714 1232 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532:SF57 337 532 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532:SF57 557 611 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532:SF57 149 317 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF49464 150 233 3.92E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532 714 1232 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532 337 532 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532 557 611 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 PANTHER PTHR11532 149 317 6.2E-181 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF56935 487 556 7.78E-69 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF56935 1053 1105 7.78E-69 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF56935 695 993 7.78E-69 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF56935 233 406 7.78E-69 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 SUPERFAMILY SSF56935 600 652 7.78E-69 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 Gene3D G3DSA:2.40.170.20 486 997 1.1E-16 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 346 376 6.7E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 Pfam PF13715 CarboxypepD_reg-like domain 152 235 2.5E-18 T 23-04-2016 NIAKO_RS13725 7842d207579869e75c59afc61c1095f5 1234 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 151 1234 2.6E-186 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 SMART SM00342 201 284 7.0E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 SUPERFAMILY SSF46689 241 286 5.38E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 Pfam PF12833 Helix-turn-helix domain 207 286 3.7E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 Gene3D G3DSA:2.60.120.280 34 171 2.2E-10 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 Pfam PF02311 AraC-like ligand binding domain 33 109 1.8E-10 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 PANTHER PTHR11019:SF45 18 286 8.0E-44 T 23-04-2016 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 PANTHER PTHR11019 18 286 8.0E-44 T 23-04-2016 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 SUPERFAMILY SSF51215 36 170 7.32E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03840 aedff620f5a3455bd90589e674a09dc1 290 Gene3D G3DSA:1.10.10.60 241 288 3.1E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 SUPERFAMILY SSF56176 81 297 2.66E-43 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 Pfam PF01565 FAD binding domain 118 263 2.6E-22 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 PANTHER PTHR13878 38 608 3.5E-77 T 23-04-2016 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 Gene3D G3DSA:3.30.43.10 118 175 2.9E-8 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 PANTHER PTHR13878:SF5 38 608 3.5E-77 T 23-04-2016 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 Pfam PF08031 Berberine and berberine like 553 595 3.1E-9 T 23-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 NIAKO_RS16275 47eca40a6930e7ae1525232dd1ec3ad5 613 Gene3D G3DSA:3.30.465.10 189 297 4.0E-10 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS14225 a42d53ff8b4b8bcb2cb11a4c5b14de03 306 SUPERFAMILY SSF75005 10 301 3.28E-63 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS14225 a42d53ff8b4b8bcb2cb11a4c5b14de03 306 PANTHER PTHR22925 22 303 6.1E-72 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS14225 a42d53ff8b4b8bcb2cb11a4c5b14de03 306 Pfam PF04616 Glycosyl hydrolases family 43 23 300 5.4E-44 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS14225 a42d53ff8b4b8bcb2cb11a4c5b14de03 306 PANTHER PTHR22925:SF42 22 303 6.1E-72 T 23-04-2016 NIAKO_RS14225 a42d53ff8b4b8bcb2cb11a4c5b14de03 306 Gene3D G3DSA:2.115.10.20 12 301 1.6E-73 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 Gene3D G3DSA:3.40.640.10 17 248 2.4E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 367 4.7E-124 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 Gene3D G3DSA:3.90.1150.10 250 371 2.8E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 PANTHER PTHR30244 5 373 1.5E-125 T 23-04-2016 NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 PANTHER PTHR30244:SF15 5 373 1.5E-125 T 23-04-2016 NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 SUPERFAMILY SSF53383 16 371 9.65E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS33275 40eee684650706458ce58375c977df7c 373 PIRSF PIRSF000390 4 373 1.9E-108 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 SUPERFAMILY SSF52172 2 121 5.27E-20 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 SUPERFAMILY SSF46894 142 214 1.67E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 PANTHER PTHR26402:SF588 3 213 1.0E-43 T 23-04-2016 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 SMART SM00421 152 209 8.4E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 Gene3D G3DSA:3.40.50.2300 2 156 1.6E-22 T 23-04-2016 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 Gene3D G3DSA:1.10.10.10 157 214 1.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 PANTHER PTHR26402 3 213 1.0E-43 T 23-04-2016 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 SMART SM00448 3 116 1.5E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.2E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.2E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.2E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS06910 fb80d16872af3da2db18e3a5cae1b0b7 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 2.6E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 Pfam PF13905 Thioredoxin-like 390 487 7.7E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 Pfam PF00149 Calcineurin-like phosphoesterase 583 799 2.4E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 Gene3D G3DSA:3.60.21.10 569 835 8.6E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 SUPERFAMILY SSF52833 369 518 7.97E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 Gene3D G3DSA:3.40.30.10 370 494 1.6E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36680 954f72b1235ab0521e3cb6c0d375ab15 860 SUPERFAMILY SSF56300 516 820 4.43E-33 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 160 7.5E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 PANTHER PTHR30173 2 173 6.6E-36 T 23-04-2016 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 SUPERFAMILY SSF88946 4 91 3.57E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 SUPERFAMILY SSF88659 99 160 3.71E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 Gene3D G3DSA:1.10.1740.10 3 86 3.9E-15 T 23-04-2016 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 PANTHER PTHR30173:SF20 2 173 6.6E-36 T 23-04-2016 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 Pfam PF04542 Sigma-70 region 2 14 78 1.6E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 Gene3D G3DSA:1.10.10.10 103 163 1.1E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16965 4a25166836e8b6685e6dcc40a470a2ad 177 Pfam PF08281 Sigma-70, region 4 109 159 1.9E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 362 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 328 346 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 1.1E-39 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 Gene3D G3DSA:3.50.50.60 10 80 6.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 Gene3D G3DSA:3.50.50.60 122 200 6.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 Gene3D G3DSA:3.50.50.60 283 366 6.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PANTHER PTHR13789:SF90 9 442 5.9E-75 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 PANTHER PTHR13789 9 442 5.9E-75 T 23-04-2016 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 Pfam PF01494 FAD binding domain 10 361 1.3E-59 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 SUPERFAMILY SSF51905 10 195 1.36E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS29375 8ea11f75145a01e0f11e0b6a4bef76a4 510 SUPERFAMILY SSF51905 282 373 1.36E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 SUPERFAMILY SSF52172 3 135 2.85E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 SMART SM00448 4 118 2.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 Gene3D G3DSA:1.10.10.10 160 217 2.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 Gene3D G3DSA:3.40.50.2300 2 159 4.4E-33 T 23-04-2016 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 Pfam PF00072 Response regulator receiver domain 7 118 1.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 PANTHER PTHR26402:SF458 4 220 7.2E-50 T 23-04-2016 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 9.1E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 SMART SM00421 155 212 1.5E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 PANTHER PTHR26402 4 220 7.2E-50 T 23-04-2016 NIAKO_RS08535 1f8846bc7dc20e12352bedc85fbe9ef0 221 SUPERFAMILY SSF46894 149 217 2.07E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 PIRSF PIRSF005650 1 237 4.6E-96 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 SUPERFAMILY SSF53633 2 235 3.53E-74 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 8.8E-103 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 Pfam PF00696 Amino acid kinase family 6 215 5.8E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 Gene3D G3DSA:3.40.1160.10 3 236 1.8E-88 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 PANTHER PTHR21499:SF23 3 237 4.8E-116 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 PANTHER PTHR21499 3 237 4.8E-116 T 23-04-2016 NIAKO_RS29685 4a720cdd6cdb69cae9fc8cfaa79514cf 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 44.949 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NIAKO_RS28935 ca90d2d410b2947d82ba4c669bab6d17 280 SUPERFAMILY SSF52949 193 264 1.34E-7 T 23-04-2016 NIAKO_RS28935 ca90d2d410b2947d82ba4c669bab6d17 280 TIGRFAM TIGR02452 TIGR02452: TIGR02452 family protein 9 267 7.5E-85 T 23-04-2016 IPR012664 Conserved hypothetical protein CHP02452 NIAKO_RS28935 ca90d2d410b2947d82ba4c669bab6d17 280 Pfam PF10021 Uncharacterized protein conserved in bacteria (DUF2263) 10 160 1.5E-52 T 23-04-2016 IPR019261 Domain of unknown function DUF2263 NIAKO_RS28935 ca90d2d410b2947d82ba4c669bab6d17 280 PANTHER PTHR35596 1 277 4.0E-65 T 23-04-2016 NIAKO_RS28935 ca90d2d410b2947d82ba4c669bab6d17 280 PIRSF PIRSF014899 1 277 2.3E-95 T 23-04-2016 IPR012664 Conserved hypothetical protein CHP02452 NIAKO_RS25405 c7a732c5917fc0e50c1271913947d892 339 Gene3D G3DSA:3.40.50.1110 77 122 1.3E-7 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25405 c7a732c5917fc0e50c1271913947d892 339 Gene3D G3DSA:3.40.50.1110 239 335 1.3E-7 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25405 c7a732c5917fc0e50c1271913947d892 339 SUPERFAMILY SSF52266 241 335 3.85E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25405 c7a732c5917fc0e50c1271913947d892 339 SUPERFAMILY SSF52266 50 123 3.85E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Gene3D G3DSA:3.40.50.10380 9 161 9.6E-54 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 SUPERFAMILY SSF53659 429 752 9.05E-89 T 23-04-2016 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 431 749 9.2E-93 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 SUPERFAMILY SSF53223 12 162 1.15E-53 T 23-04-2016 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 PIRSF PIRSF036684 1 757 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 SUPERFAMILY SSF51735 164 442 1.14E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 PANTHER PTHR23406:SF23 22 442 1.1E-167 T 23-04-2016 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 SMART SM00919 164 400 3.6E-130 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Gene3D G3DSA:3.40.50.720 162 448 2.0E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.9E-28 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Pfam PF03949 Malic enzyme, NAD binding domain 166 356 4.9E-21 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 PANTHER PTHR23406 22 442 1.1E-167 T 23-04-2016 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 Gene3D G3DSA:3.40.50.10750 565 725 1.1E-51 T 23-04-2016 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 SMART SM01274 19 152 9.8E-85 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NIAKO_RS00690 fb541eb0748484eb2f691b3bb0d6551e 773 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Pfam PF02225 PA domain 140 212 2.3E-5 T 23-04-2016 IPR003137 PA domain NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Gene3D G3DSA:3.50.30.30 125 211 1.1E-10 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Pfam PF04389 Peptidase family M28 258 471 1.3E-15 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 SUPERFAMILY SSF53187 384 478 7.33E-27 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 SUPERFAMILY SSF53187 249 351 7.33E-27 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 SUPERFAMILY SSF53187 27 86 7.33E-27 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Gene3D G3DSA:3.40.630.10 254 351 1.7E-28 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Gene3D G3DSA:3.40.630.10 384 479 1.7E-28 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 Gene3D G3DSA:3.40.630.10 26 91 1.7E-28 T 23-04-2016 NIAKO_RS34510 cec6247f2766af5cb13824430a829fb8 572 SUPERFAMILY SSF52025 104 206 2.35E-12 T 23-04-2016 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 PANTHER PTHR26402 2 113 1.2E-29 T 23-04-2016 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 Gene3D G3DSA:2.40.50.40 133 201 1.5E-21 T 23-04-2016 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 Pfam PF04397 LytTr DNA-binding domain 143 231 8.2E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-29 T 23-04-2016 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 Pfam PF00072 Response regulator receiver domain 5 110 6.9E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 SMART SM00448 2 110 9.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 SMART SM00850 142 233 1.0E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20730 198cc99eae019c2be37fbb1aedf57b2e 234 SUPERFAMILY SSF52172 1 126 2.7E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 5.8E-65 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 PANTHER PTHR11941 1 255 2.4E-94 T 23-04-2016 NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 Gene3D G3DSA:3.90.226.10 2 195 1.3E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 SUPERFAMILY SSF52096 1 257 1.61E-86 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 PANTHER PTHR11941:SF54 1 255 2.4E-94 T 23-04-2016 NIAKO_RS27710 6ff7d5093a6c8d7ffcd34c620354e22a 258 Gene3D G3DSA:1.10.12.10 201 258 5.3E-16 T 23-04-2016 IPR014748 Crontonase, C-terminal NIAKO_RS04435 c0391aaf6e7f15c10e4d4d025c53c223 294 Pfam PF14054 Domain of unknown function (DUF4249) 8 287 3.3E-31 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS37525 65e1791b87cecd00254b21cd16f1ff9b 361 PANTHER PTHR34220:SF1 13 361 7.0E-54 T 23-04-2016 NIAKO_RS37525 65e1791b87cecd00254b21cd16f1ff9b 361 PANTHER PTHR34220 13 361 7.0E-54 T 23-04-2016 NIAKO_RS37525 65e1791b87cecd00254b21cd16f1ff9b 361 Pfam PF06580 Histidine kinase 170 247 4.7E-25 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS21360 a29b1dbaee57e11f1124158acb47f883 315 PANTHER PTHR18895 15 313 4.4E-105 T 23-04-2016 NIAKO_RS21360 a29b1dbaee57e11f1124158acb47f883 315 SUPERFAMILY SSF53335 9 302 1.19E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21360 a29b1dbaee57e11f1124158acb47f883 315 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 264 1.8E-28 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 NIAKO_RS21360 a29b1dbaee57e11f1124158acb47f883 315 Gene3D G3DSA:3.40.50.150 46 303 2.6E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21360 a29b1dbaee57e11f1124158acb47f883 315 PANTHER PTHR18895:SF61 15 313 4.4E-105 T 23-04-2016 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 15 163 24.436 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 22 159 5.0E-39 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 Gene3D G3DSA:3.40.50.960 18 165 3.9E-51 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 PANTHER PTHR21058 22 159 1.0E-50 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 22 160 2.6E-48 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS09990 fcd0ee846405415ecab9b0cee729e196 167 SUPERFAMILY SSF52121 16 165 8.9E-49 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NIAKO_RS29030 c85e9a25c496c4cced072107416d8d09 384 PANTHER PTHR32204 8 335 6.0E-72 T 23-04-2016 NIAKO_RS29030 c85e9a25c496c4cced072107416d8d09 384 SMART SM00382 42 179 2.0E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS29030 c85e9a25c496c4cced072107416d8d09 384 Pfam PF07728 AAA domain (dynein-related subfamily) 45 172 1.7E-27 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NIAKO_RS29030 c85e9a25c496c4cced072107416d8d09 384 SUPERFAMILY SSF52540 24 195 2.2E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29030 c85e9a25c496c4cced072107416d8d09 384 Gene3D G3DSA:3.40.50.300 27 190 2.1E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PANTHER PTHR19446:SF107 25 308 6.1E-56 T 23-04-2016 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 1.5E-8 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 1.5E-8 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 1.5E-8 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 205 218 1.5E-8 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 PANTHER PTHR19446 25 308 6.1E-56 T 23-04-2016 NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 Pfam PF08388 Group II intron, maturase-specific domain 293 359 7.9E-15 T 23-04-2016 IPR013597 Group II intron, maturase-specific NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 11 354 4.9E-118 T 23-04-2016 IPR030931 Group II intron reverse transcriptase/maturase NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 273 8.5E-45 T 23-04-2016 IPR000477 Reverse transcriptase domain NIAKO_RS29715 12f699be0028863b5e5dc8ad83ea27bb 422 SUPERFAMILY SSF56672 15 347 1.72E-44 T 23-04-2016 NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 PANTHER PTHR10900 40 126 3.4E-13 T 23-04-2016 NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 PANTHER PTHR10900 653 669 3.4E-13 T 23-04-2016 NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 PANTHER PTHR10900 150 235 3.4E-13 T 23-04-2016 NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 SMART SM00554 73 235 3.1E-6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 SUPERFAMILY SSF82153 202 236 4.45E-19 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 SUPERFAMILY SSF82153 40 128 4.45E-19 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 Pfam PF02469 Fasciclin domain 49 234 5.0E-14 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 Gene3D G3DSA:2.30.180.10 161 234 4.9E-24 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 Gene3D G3DSA:2.30.180.10 39 129 4.9E-24 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS03590 a013ccc000e5b9fd7d89a58b7e70c1d5 735 Pfam PF16384 Domain of unknown function 237 457 1.6E-13 T 23-04-2016 IPR032156 Domain of unknown function DUF4993 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 PANTHER PTHR38464 2 499 2.2E-208 T 23-04-2016 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 SUPERFAMILY SSF50443 330 496 7.32E-72 T 23-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 Hamap MF_00519 L-arabinose isomerase [araA]. 1 476 65.127 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 SUPERFAMILY SSF53743 1 326 1.52E-121 T 23-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 3.0E-110 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 PANTHER PTHR38464:SF1 2 499 2.2E-208 T 23-04-2016 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 PIRSF PIRSF001478 1 498 5.7E-244 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 Pfam PF11762 L-arabinose isomerase C-terminal domain 362 475 5.3E-51 T 23-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS17895 323432dbad234d9e57f23fc9348fd48c 499 Pfam PF02610 L-arabinose isomerase 5 359 3.0E-184 T 23-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 NIAKO_RS37420 ecf8720632f109c7eb90a804a07094d3 369 Gene3D G3DSA:3.30.70.1230 188 367 1.9E-23 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NIAKO_RS37420 ecf8720632f109c7eb90a804a07094d3 369 PANTHER PTHR11920:SF348 181 367 1.6E-12 T 23-04-2016 NIAKO_RS37420 ecf8720632f109c7eb90a804a07094d3 369 PANTHER PTHR11920 181 367 1.6E-12 T 23-04-2016 NIAKO_RS37420 ecf8720632f109c7eb90a804a07094d3 369 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 187 367 3.9E-17 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NIAKO_RS37420 ecf8720632f109c7eb90a804a07094d3 369 SUPERFAMILY SSF55073 182 367 5.65E-35 T 23-04-2016 IPR029787 Nucleotide cyclase NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 SUPERFAMILY SSF56300 7 228 5.26E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 Pfam PF00149 Calcineurin-like phosphoesterase 8 211 2.8E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 Gene3D G3DSA:3.60.21.10 7 227 2.6E-20 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 PANTHER PTHR31302 157 175 1.7E-14 T 23-04-2016 NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 PANTHER PTHR31302 191 212 1.7E-14 T 23-04-2016 NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 PANTHER PTHR31302 8 135 1.7E-14 T 23-04-2016 NIAKO_RS33610 01a01919026ae520629152e9f4434a60 246 PIRSF PIRSF008292 5 244 1.5E-69 T 23-04-2016 IPR016538 Uncharacterised conserved protein UCP008292 NIAKO_RS06180 7f8b85db1329dcda5f7d95d92ab8c1ea 252 SUPERFAMILY SSF52242 135 195 9.26E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS06180 7f8b85db1329dcda5f7d95d92ab8c1ea 252 Gene3D G3DSA:3.40.50.280 136 195 2.6E-7 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS06180 7f8b85db1329dcda5f7d95d92ab8c1ea 252 Pfam PF02607 B12 binding domain 57 124 1.8E-7 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIAKO_RS25110 45fa57cfa23ed5d917d482b9d80544f6 113 SMART SM01409 23 77 1.3E-6 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS25110 45fa57cfa23ed5d917d482b9d80544f6 113 Pfam PF01192 RNA polymerase Rpb6 26 77 4.4E-8 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS33805 73c519764f8af1fb476cff7aab775dcf 115 SUPERFAMILY SSF55159 20 110 1.57E-21 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 NIAKO_RS33805 73c519764f8af1fb476cff7aab775dcf 115 Gene3D G3DSA:3.30.780.10 36 113 3.5E-27 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 NIAKO_RS33805 73c519764f8af1fb476cff7aab775dcf 115 PIRSF PIRSF037511 1 115 5.3E-29 T 23-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 NIAKO_RS33805 73c519764f8af1fb476cff7aab775dcf 115 PANTHER PTHR12789 23 109 5.0E-19 T 23-04-2016 NIAKO_RS33805 73c519764f8af1fb476cff7aab775dcf 115 Pfam PF01253 Translation initiation factor SUI1 36 109 2.7E-17 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 PANTHER PTHR24567 16 208 4.5E-25 T 23-04-2016 NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 SUPERFAMILY SSF51206 10 144 2.23E-26 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 Pfam PF13545 Crp-like helix-turn-helix domain 155 208 1.3E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 Gene3D G3DSA:1.10.10.10 167 209 2.2E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 Pfam PF00027 Cyclic nucleotide-binding domain 28 116 6.4E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 167 183 9.9E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 198 9.9E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 SUPERFAMILY SSF46785 143 209 1.47E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 Gene3D G3DSA:2.60.120.10 10 144 2.2E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS32075 d15c96937b58de928f5a74cf7b965320 210 SMART SM00419 161 209 1.5E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS10520 135263b85bbf6614f3860eea50c09d1b 292 Gene3D G3DSA:3.30.1330.60 152 277 7.5E-33 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10520 135263b85bbf6614f3860eea50c09d1b 292 Pfam PF00691 OmpA family 171 271 3.1E-19 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10520 135263b85bbf6614f3860eea50c09d1b 292 PANTHER PTHR30329:SF4 153 280 6.1E-34 T 23-04-2016 NIAKO_RS10520 135263b85bbf6614f3860eea50c09d1b 292 SUPERFAMILY SSF103088 156 277 3.14E-30 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS10520 135263b85bbf6614f3860eea50c09d1b 292 PANTHER PTHR30329 153 280 6.1E-34 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 Gene3D G3DSA:2.130.10.130 121 206 1.5E-4 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 Gene3D G3DSA:2.130.10.130 296 377 1.5E-4 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 PANTHER PTHR32438:SF6 1 592 1.8E-159 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 PANTHER PTHR32438 1 592 1.8E-159 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 SUPERFAMILY SSF69318 526 557 4.97E-17 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 SUPERFAMILY SSF69318 113 218 4.97E-17 T 23-04-2016 NIAKO_RS03720 ffbba54b2ad77b8794b9f8af15e603f1 593 SUPERFAMILY SSF69318 247 389 4.97E-17 T 23-04-2016 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 Gene3D G3DSA:3.90.840.10 351 372 4.7E-14 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 Gene3D G3DSA:3.90.840.10 103 183 4.7E-14 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 Gene3D G3DSA:3.90.840.10 229 270 4.7E-14 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 Pfam PF01289 Thiol-activated cytolysin 103 398 1.3E-34 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 359 386 1.6E-5 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 310 327 1.6E-5 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 253 276 1.6E-5 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS03340 a059d4648ffcc2fbeb4078cd33415c76 569 SUPERFAMILY SSF56978 102 414 8.37E-32 T 23-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 NIAKO_RS05195 c7ea7343f18f083d67b51f0ba99f462c 186 SUPERFAMILY SSF88874 3 180 1.29E-36 T 23-04-2016 NIAKO_RS05195 c7ea7343f18f083d67b51f0ba99f462c 186 Pfam PF07484 Phage Tail Collar Domain 8 63 5.0E-24 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS05195 c7ea7343f18f083d67b51f0ba99f462c 186 PANTHER PTHR34720 2 183 7.1E-28 T 23-04-2016 NIAKO_RS05195 c7ea7343f18f083d67b51f0ba99f462c 186 Gene3D G3DSA:3.90.1340.10 4 68 5.1E-27 T 23-04-2016 IPR011083 Phage tail collar domain NIAKO_RS32135 e80d00127b1f76a00a2f8ffe5fd650e2 167 SUPERFAMILY SSF160574 55 147 1.31E-7 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF56935 118 261 1.92E-76 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF56935 319 407 1.92E-76 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF56935 954 1038 1.92E-76 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF56935 442 800 1.92E-76 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF56935 870 913 1.92E-76 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 Gene3D G3DSA:2.60.40.1120 40 125 5.3E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 SUPERFAMILY SSF49464 40 134 7.59E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 243 1.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 Gene3D G3DSA:2.170.130.10 126 240 2.3E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 Pfam PF13715 CarboxypepD_reg-like domain 41 122 1.5E-11 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 40 1042 1.2E-263 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 237 6.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532:SF57 19 373 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532:SF57 389 439 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532:SF57 526 552 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532:SF57 582 1040 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532 19 373 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532 389 439 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532 526 552 1.3E-247 T 23-04-2016 NIAKO_RS30400 654e078122dcd3beecfe6a4140798896 1042 PANTHER PTHR11532 582 1040 1.3E-247 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Pfam PF01055 Glycosyl hydrolases family 31 382 840 1.5E-129 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 SMART SM00758 229 370 7.7E-6 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Pfam PF17137 Domain of unknown function (DUF5110) 856 924 3.1E-20 T 23-04-2016 IPR033403 Domain of unknown function DUF5110 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 SUPERFAMILY SSF51445 391 751 2.74E-62 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762 687 946 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762 49 213 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762 364 670 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 SUPERFAMILY SSF51011 756 835 1.8E-18 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Pfam PF16338 Domain of unknown function (DUF4968) 46 127 9.1E-13 T 23-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Gene3D G3DSA:3.20.20.70 419 491 3.7E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Gene3D G3DSA:3.20.20.70 524 667 3.7E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762:SF86 687 946 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762:SF86 49 213 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 PANTHER PTHR22762:SF86 364 670 2.5E-259 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 SUPERFAMILY SSF56988 234 361 1.83E-11 T 23-04-2016 NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Gene3D G3DSA:3.90.182.10 223 418 1.9E-17 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 Pfam PF07691 PA14 domain 232 360 2.5E-9 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS11760 df99a9267bf9d5679a732a42b7ca2b04 952 SUPERFAMILY SSF74650 12 208 1.35E-22 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 Gene3D G3DSA:1.20.5.710 9 51 1.9E-8 T 23-04-2016 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 124 2.6E-39 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 1.5E-13 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 Gene3D G3DSA:3.30.1390.10 52 124 2.4E-31 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 21.878 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 SUPERFAMILY SSF48300 4 60 9.68E-13 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 2.0E-8 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 SUPERFAMILY SSF54736 53 124 9.42E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIAKO_RS24185 f6dea39673d1d5762b1f58482db94720 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 5.3E-29 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SUPERFAMILY SSF52540 563 802 1.33E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Gene3D G3DSA:1.10.8.60 737 808 1.7E-21 T 23-04-2016 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Pfam PF00158 Sigma-54 interaction domain 564 730 6.4E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SUPERFAMILY SSF55781 397 537 7.41E-9 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SUPERFAMILY SSF55781 201 381 5.67E-5 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Gene3D G3DSA:1.10.10.60 811 869 3.1E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 777 786 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 PANTHER PTHR32071 535 874 4.9E-153 T 23-04-2016 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Gene3D G3DSA:3.30.450.40 368 536 9.5E-10 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Pfam PF02954 Bacterial regulatory protein, Fis family 823 867 1.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 588 601 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Gene3D G3DSA:3.40.50.300 560 736 2.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SMART SM00382 584 728 2.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SMART SM00065 41 196 0.055 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SMART SM00065 389 538 0.016 T 23-04-2016 IPR003018 GAF domain GO:0005515 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SUPERFAMILY SSF46689 776 869 1.88E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 Gene3D G3DSA:3.30.450.40 17 194 3.1E-9 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS37175 347223134182439ebd581da952a7f41e 876 SUPERFAMILY SSF55781 41 195 1.57E-8 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS19575 9bac07e56cab4de4eb7c7eea374082b8 1036 PANTHER PTHR41711:SF1 31 905 1.3E-67 T 23-04-2016 NIAKO_RS19575 9bac07e56cab4de4eb7c7eea374082b8 1036 PANTHER PTHR41711 31 905 1.3E-67 T 23-04-2016 NIAKO_RS19575 9bac07e56cab4de4eb7c7eea374082b8 1036 Pfam PF04465 Protein of unknown function (DUF499) 123 371 1.2E-19 T 23-04-2016 IPR007555 Protein of unknown function DUF499 NIAKO_RS19575 9bac07e56cab4de4eb7c7eea374082b8 1036 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 841 892 7.0E-6 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 PANTHER PTHR12147:SF16 32 182 1.1E-35 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 PANTHER PTHR12147:SF16 199 482 1.1E-35 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 PANTHER PTHR12147 32 182 1.1E-35 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 PANTHER PTHR12147 199 482 1.1E-35 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 Gene3D G3DSA:3.40.630.10 21 92 4.4E-49 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 Gene3D G3DSA:3.40.630.10 257 479 4.4E-49 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 Pfam PF04389 Peptidase family M28 260 467 6.5E-32 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 SUPERFAMILY SSF53187 244 477 5.28E-50 T 23-04-2016 NIAKO_RS01255 84425a1d42b888425fa4895ab33f5c20 491 SUPERFAMILY SSF53187 27 76 5.28E-50 T 23-04-2016 NIAKO_RS32275 280a92878bba028e1314312f058a5396 293 Pfam PF01613 Flavin reductase like domain 23 178 8.7E-15 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 NIAKO_RS32275 280a92878bba028e1314312f058a5396 293 PANTHER PTHR33798 1 223 1.5E-49 T 23-04-2016 NIAKO_RS32275 280a92878bba028e1314312f058a5396 293 Gene3D G3DSA:2.30.110.10 13 191 1.1E-55 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS32275 280a92878bba028e1314312f058a5396 293 SMART SM00903 21 181 4.2E-9 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 NIAKO_RS32275 280a92878bba028e1314312f058a5396 293 SUPERFAMILY SSF50475 2 195 4.36E-40 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 Pfam PF16313 Met-zincin 423 732 2.0E-107 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 Pfam PF17148 Domain of unknown function (DUF5117) 108 290 3.5E-60 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 Pfam PF17162 Domain of unknown function (DUF5118) 45 92 2.2E-18 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 SUPERFAMILY SSF55486 243 515 8.07E-20 T 23-04-2016 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 Gene3D G3DSA:3.40.390.10 281 516 2.4E-14 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS01170 8fafb13ccff895873371941039e9e9f0 868 PANTHER PTHR38478 58 829 1.6E-130 T 23-04-2016 NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 Gene3D G3DSA:3.40.50.1580 3 246 2.4E-66 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 2 245 9.2E-104 T 23-04-2016 IPR010944 AMP nucleosidase, putative NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 Pfam PF01048 Phosphorylase superfamily 60 228 1.1E-24 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 PANTHER PTHR21234 6 255 2.0E-64 T 23-04-2016 IPR018017 Nucleoside phosphorylase NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 SUPERFAMILY SSF53167 6 248 2.36E-64 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS24745 4a6729f2562972dc3f3eb78867519971 256 PANTHER PTHR21234:SF11 6 255 2.0E-64 T 23-04-2016 NIAKO_RS29730 d5dcaa05fcd969a8dbaaeb16219c643c 200 PANTHER PTHR38659 21 193 1.1E-44 T 23-04-2016 NIAKO_RS29730 d5dcaa05fcd969a8dbaaeb16219c643c 200 SUPERFAMILY SSF109604 24 139 2.79E-10 T 23-04-2016 NIAKO_RS29730 d5dcaa05fcd969a8dbaaeb16219c643c 200 Gene3D G3DSA:1.10.3210.10 21 180 1.5E-17 T 23-04-2016 IPR006674 HD domain NIAKO_RS29730 d5dcaa05fcd969a8dbaaeb16219c643c 200 PANTHER PTHR38659:SF2 21 193 1.1E-44 T 23-04-2016 NIAKO_RS13240 145cb9f993a7e9d3af17d89ef7bb9413 151 Pfam PF07291 Methylamine utilisation protein MauE 13 103 4.8E-5 T 23-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 NIAKO_RS33575 56d9c7766e7872ff237bc850c81ae054 150 Gene3D G3DSA:3.10.450.50 24 147 1.4E-26 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS33575 56d9c7766e7872ff237bc850c81ae054 150 SUPERFAMILY SSF54427 28 145 4.3E-26 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS33575 56d9c7766e7872ff237bc850c81ae054 150 Pfam PF12893 Putative lumazine-binding 31 145 1.4E-31 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 Gene3D G3DSA:3.40.50.720 27 176 1.3E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604:SF2 222 266 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604:SF2 285 439 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604:SF2 32 197 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 34 160 4.2E-9 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 Gene3D G3DSA:3.30.360.10 177 411 2.3E-4 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 SUPERFAMILY SSF51735 20 192 1.63E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604 222 266 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604 285 439 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 PANTHER PTHR22604 32 197 1.7E-87 T 23-04-2016 NIAKO_RS07535 0deaa3a663a32c8cee777930c2ab33a7 450 SUPERFAMILY SSF55347 170 340 4.25E-5 T 23-04-2016 NIAKO_RS28075 f4b090f607040bb367e80ff6befc0488 276 PANTHER PTHR33969:SF2 6 269 6.1E-44 T 23-04-2016 NIAKO_RS28075 f4b090f607040bb367e80ff6befc0488 276 Hamap MF_01805 Segregation and condensation protein A [scpA]. 7 249 19.346 T 23-04-2016 IPR003768 Segregation and condensation protein A NIAKO_RS28075 f4b090f607040bb367e80ff6befc0488 276 Pfam PF02616 Segregation and condensation protein ScpA 25 234 1.3E-26 T 23-04-2016 IPR003768 Segregation and condensation protein A NIAKO_RS28075 f4b090f607040bb367e80ff6befc0488 276 PANTHER PTHR33969 6 269 6.1E-44 T 23-04-2016 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Gene3D G3DSA:2.160.20.10 976 1077 9.6E-8 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Gene3D G3DSA:2.160.20.10 594 932 9.6E-8 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Gene3D G3DSA:2.160.20.10 40 500 2.5E-11 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Pfam PF13229 Right handed beta helix region 706 827 2.0E-5 T 23-04-2016 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Pfam PF13229 Right handed beta helix region 149 292 9.4E-8 T 23-04-2016 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SUPERFAMILY SSF51126 46 263 1.62E-11 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Gene3D G3DSA:2.60.40.10 1088 1150 5.7E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Gene3D G3DSA:2.60.40.10 1179 1248 1.3E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1266 1351 4.3E-15 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 253 278 2600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 317 343 490.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 230 252 260.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 891 917 5200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 198 219 14.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 767 788 520.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 817 852 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 724 753 4600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 854 885 2200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 156 185 9.3 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 126 154 5200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 794 816 5.8 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 918 947 9100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00710 280 311 340.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SUPERFAMILY SSF49265 1088 1244 1.9E-8 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SUPERFAMILY SSF51126 1023 1077 3.43E-11 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SUPERFAMILY SSF51126 595 971 3.43E-11 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 Pfam PF13585 C-terminal domain of CHU protein family 1265 1348 1.6E-21 T 23-04-2016 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SUPERFAMILY SSF51126 231 500 3.84E-8 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00060 1082 1154 15.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS07355 b78bb2dd3f2e7526c174b80d81275934 1351 SMART SM00060 1173 1248 0.0028 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 Hamap MF_00023 SsrA-binding protein [smpB]. 1 145 64.148 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 Gene3D G3DSA:2.40.280.10 4 122 2.8E-48 T 23-04-2016 IPR023620 Small protein B NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 PANTHER PTHR30308:SF2 4 145 2.0E-69 T 23-04-2016 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 PANTHER PTHR30308 4 145 2.0E-69 T 23-04-2016 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 145 2.6E-59 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 SUPERFAMILY SSF74982 4 127 4.32E-47 T 23-04-2016 IPR023620 Small protein B NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 6 127 2.0E-28 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 NIAKO_RS04350 6bec22db58127328ea5ba056859de5f9 145 Pfam PF01668 SmpB protein 4 65 4.9E-27 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 NIAKO_RS23105 73776e817bf062795bca717c98e9508e 257 SUPERFAMILY SSF102110 5 247 2.22E-81 T 23-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 NIAKO_RS23105 73776e817bf062795bca717c98e9508e 257 Gene3D G3DSA:3.20.20.70 8 248 8.5E-81 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS23105 73776e817bf062795bca717c98e9508e 257 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 10 245 3.9E-85 T 23-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 NIAKO_RS35745 333dc2369a6212653759ddc9b1c6bfae 343 SUPERFAMILY SSF53613 9 333 5.14E-62 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS35745 333dc2369a6212653759ddc9b1c6bfae 343 Pfam PF00294 pfkB family carbohydrate kinase 13 314 6.3E-27 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB NIAKO_RS35745 333dc2369a6212653759ddc9b1c6bfae 343 PANTHER PTHR10584:SF203 1 343 4.7E-72 T 23-04-2016 NIAKO_RS35745 333dc2369a6212653759ddc9b1c6bfae 343 PANTHER PTHR10584 1 343 4.7E-72 T 23-04-2016 NIAKO_RS35745 333dc2369a6212653759ddc9b1c6bfae 343 Gene3D G3DSA:3.40.1190.20 4 338 3.4E-66 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS17915 e85575e641c498c4e3c88e295f5cf1dc 273 Gene3D G3DSA:3.40.50.1110 41 273 8.4E-76 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17915 e85575e641c498c4e3c88e295f5cf1dc 273 SUPERFAMILY SSF52266 41 262 1.1E-51 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17915 e85575e641c498c4e3c88e295f5cf1dc 273 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 45 247 5.0E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS18325 95dca6bd20f5fb3293226884c6fb25cb 453 Gene3D G3DSA:3.80.10.10 89 321 9.7E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like NIAKO_RS18325 95dca6bd20f5fb3293226884c6fb25cb 453 SUPERFAMILY SSF52047 109 343 9.42E-10 T 23-04-2016 NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 Pfam PF06452 Carbohydrate family 9 binding domain-like 40 222 6.0E-11 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 SUPERFAMILY SSF49344 35 210 1.26E-15 T 23-04-2016 NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 Gene3D G3DSA:2.60.40.1190 36 221 6.1E-15 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 Pfam PF00144 Beta-lactamase 348 648 2.4E-53 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 Gene3D G3DSA:3.40.710.10 342 657 1.0E-67 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 SUPERFAMILY SSF56601 346 647 3.3E-63 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS18155 92c7faf4494b3f5f4f067153cd7d60ca 664 PANTHER PTHR22935 320 642 8.5E-47 T 23-04-2016 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 Gene3D G3DSA:2.60.40.1120 411 468 3.1E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 Gene3D G3DSA:2.60.40.1120 509 571 3.2E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 SUPERFAMILY SSF49464 507 577 1.12E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 PANTHER PTHR30417:SF1 252 348 1.3E-37 T 23-04-2016 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 PANTHER PTHR30417:SF1 366 402 1.3E-37 T 23-04-2016 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 SMART SM00644 240 386 8.6E-29 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 Pfam PF08486 Stage II sporulation protein 670 751 2.7E-7 T 23-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 SUPERFAMILY SSF55846 239 399 1.44E-33 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 PANTHER PTHR30417 252 348 1.3E-37 T 23-04-2016 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 PANTHER PTHR30417 366 402 1.3E-37 T 23-04-2016 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 SUPERFAMILY SSF49464 411 491 5.49E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 Gene3D G3DSA:3.40.80.10 240 398 1.5E-34 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS37150 e1b157df66301215d56b62b3ffd51c99 936 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 250 386 8.4E-20 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 SUPERFAMILY SSF50685 37 128 1.73E-7 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 PANTHER PTHR34183:SF2 40 130 4.0E-24 T 23-04-2016 NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 Gene3D G3DSA:2.40.40.10 49 126 1.8E-4 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 40 134 3.4E-29 T 23-04-2016 IPR012997 Rare lipoprotein A NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 Pfam PF03330 Lytic transglycolase 39 127 1.1E-13 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS22065 24dbbfbaa80413e19ff503f422c64b40 144 PANTHER PTHR34183 40 130 4.0E-24 T 23-04-2016 NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 PANTHER PTHR32234 188 567 6.9E-86 T 23-04-2016 NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 PANTHER PTHR32234:SF0 188 567 6.9E-86 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 Pfam PF13899 Thioredoxin-like 506 568 4.6E-14 T 23-04-2016 NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 Gene3D G3DSA:3.40.30.10 506 646 1.1E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 193 390 1.5E-14 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 NIAKO_RS36165 deab5b444d5c1a2b28855152672d18f9 653 SUPERFAMILY SSF52833 466 646 3.86E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 68 3.8E-5 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 SUPERFAMILY SSF51735 1 279 1.24E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 PANTHER PTHR10366 2 236 2.1E-65 T 23-04-2016 NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 PANTHER PTHR10366 257 302 2.1E-65 T 23-04-2016 NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 Gene3D G3DSA:3.40.50.720 1 227 1.4E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 Pfam PF11066 Protein of unknown function (DUF2867) 330 469 1.3E-31 T 23-04-2016 IPR021295 Protein of unknown function DUF2867 NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 PANTHER PTHR10366:SF401 2 236 2.1E-65 T 23-04-2016 NIAKO_RS06110 0f18138941effbdcd45ebe0632b66082 476 PANTHER PTHR10366:SF401 257 302 2.1E-65 T 23-04-2016 NIAKO_RS15180 d5f51bfcad9224a5dd5610b57a0142ee 469 SUPERFAMILY SSF48452 22 450 7.33E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15180 d5f51bfcad9224a5dd5610b57a0142ee 469 Gene3D G3DSA:1.25.40.10 214 430 8.0E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15180 d5f51bfcad9224a5dd5610b57a0142ee 469 Pfam PF07980 SusD family 322 444 5.4E-13 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15180 d5f51bfcad9224a5dd5610b57a0142ee 469 Pfam PF14322 Starch-binding associating with outer membrane 85 234 4.6E-19 T 23-04-2016 NIAKO_RS07210 0fd1e2b959a29d72f9bb0f4f93f37d8f 678 SUPERFAMILY SSF51011 604 673 1.16E-8 T 23-04-2016 NIAKO_RS07210 0fd1e2b959a29d72f9bb0f4f93f37d8f 678 Gene3D G3DSA:2.60.40.1180 581 676 2.5E-9 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS07210 0fd1e2b959a29d72f9bb0f4f93f37d8f 678 Gene3D G3DSA:3.20.20.70 282 580 6.1E-27 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS07210 0fd1e2b959a29d72f9bb0f4f93f37d8f 678 SUPERFAMILY SSF51445 405 586 3.35E-29 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS07210 0fd1e2b959a29d72f9bb0f4f93f37d8f 678 SUPERFAMILY SSF51445 282 371 3.35E-29 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 Pfam PF03572 Peptidase family S41 223 427 1.1E-18 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 SMART SM00245 168 428 0.0082 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 Gene3D G3DSA:3.90.226.10 222 429 5.6E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 SUPERFAMILY SSF52096 6 90 3.81E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 SUPERFAMILY SSF52096 340 441 3.81E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31115 fd41bfcb2f05fe2a9bfcf809fdfe815c 458 SUPERFAMILY SSF52096 213 307 3.81E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18040 77b6da2da7e43e6047f1b49c9627f73a 335 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 180 1.7E-29 T 23-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase NIAKO_RS18040 77b6da2da7e43e6047f1b49c9627f73a 335 PANTHER PTHR40031 2 331 4.8E-35 T 23-04-2016 NIAKO_RS18040 77b6da2da7e43e6047f1b49c9627f73a 335 PANTHER PTHR40031:SF1 2 331 4.8E-35 T 23-04-2016 NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 SUPERFAMILY SSF109604 33 204 1.33E-12 T 23-04-2016 NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 Gene3D G3DSA:1.10.3210.10 29 167 5.5E-9 T 23-04-2016 IPR006674 HD domain NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 Pfam PF01966 HD domain 41 165 2.1E-7 T 23-04-2016 IPR006674 HD domain NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 TIGRFAM TIGR00277 HDIG: HDIG domain 37 108 5.9E-8 T 23-04-2016 IPR006675 HDIG domain NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 Pfam PF13671 AAA domain 227 356 3.2E-19 T 23-04-2016 NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 Gene3D G3DSA:3.40.50.300 226 360 4.2E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02675 e00b338cc2524db2a4c22422ad6808f7 369 SUPERFAMILY SSF52540 225 362 1.38E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 SMART SM00382 29 211 3.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 PANTHER PTHR24220 6 221 2.1E-95 T 23-04-2016 NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 SUPERFAMILY SSF52540 3 231 2.77E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 PANTHER PTHR24220:SF523 6 221 2.1E-95 T 23-04-2016 NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 Gene3D G3DSA:3.40.50.300 2 226 1.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 Pfam PF00005 ABC transporter 21 162 3.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS34060 4056a0d4c87784338014339179f4d3e7 311 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 Gene3D G3DSA:1.25.40.10 404 472 5.6E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 SMART SM00028 436 469 3.5E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 Pfam PF07719 Tetratricopeptide repeat 438 468 2.0E-5 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 Gene3D G3DSA:3.40.710.10 27 349 2.0E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 SUPERFAMILY SSF56601 26 351 3.02E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 Pfam PF00144 Beta-lactamase 39 345 9.2E-59 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 SUPERFAMILY SSF48452 373 479 2.37E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35440 3713201fa40c9a1ee98aac6cd0ef7400 481 PANTHER PTHR22935 24 353 1.9E-52 T 23-04-2016 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 26.11 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Gene3D G3DSA:2.40.50.140 1 64 8.5E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 191 3.4E-47 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 SUPERFAMILY SSF46929 145 193 1.83E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Gene3D G3DSA:1.10.8.10 141 194 3.6E-11 T 23-04-2016 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 SUPERFAMILY SSF50249 1 62 3.6E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Gene3D G3DSA:1.10.150.20 66 135 8.2E-27 T 23-04-2016 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Pfam PF01330 RuvA N terminal domain 1 61 1.7E-18 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 SMART SM00278 72 91 3.2 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 SMART SM00278 107 126 0.053 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Pfam PF07499 RuvA, C-terminal domain 150 193 1.6E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 SUPERFAMILY SSF47781 64 133 4.17E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 PANTHER PTHR33796 2 192 7.8E-63 T 23-04-2016 NIAKO_RS24990 f96ed457602db2d4d19f89517360a71d 194 Pfam PF14520 Helix-hairpin-helix domain 71 129 2.6E-15 T 23-04-2016 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 SUPERFAMILY SSF52172 6 135 2.85E-21 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 SMART SM00448 6 119 6.9E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 Gene3D G3DSA:3.40.50.2300 6 159 1.0E-23 T 23-04-2016 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 Gene3D G3DSA:1.10.10.10 160 216 2.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 1.5E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 Pfam PF00072 Response regulator receiver domain 8 120 2.0E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 SMART SM00421 153 210 6.0E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 PANTHER PTHR26402 6 218 1.1E-34 T 23-04-2016 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 SUPERFAMILY SSF46894 149 216 3.4E-14 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS11455 61e91e889fb7df97fb3d83b9d4681e94 229 PANTHER PTHR26402:SF458 6 218 1.1E-34 T 23-04-2016 NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 PANTHER PTHR12418 15 136 7.7E-38 T 23-04-2016 NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 Gene3D G3DSA:3.10.129.10 8 136 3.0E-42 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 Pfam PF03061 Thioesterase superfamily 54 126 5.0E-14 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 133 2.1E-26 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 SUPERFAMILY SSF54637 9 132 3.4E-29 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 PANTHER PTHR12418:SF24 15 136 7.7E-38 T 23-04-2016 NIAKO_RS30525 d19740eba082abe3cc725a03a5ffd33b 141 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 23 134 1.5E-36 T 23-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 SUPERFAMILY SSF50952 40 427 8.5E-25 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 PANTHER PTHR19328:SF33 265 426 2.6E-59 T 23-04-2016 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 PANTHER PTHR19328:SF33 40 246 2.6E-59 T 23-04-2016 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 PANTHER PTHR19328 265 426 2.6E-59 T 23-04-2016 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 PANTHER PTHR19328 40 246 2.6E-59 T 23-04-2016 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 Pfam PF07995 Glucose / Sorbosone dehydrogenase 122 346 7.5E-11 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NIAKO_RS22045 89ed9072dacdeb8db0f3954b90c3baa3 428 Gene3D G3DSA:2.120.10.30 10 426 8.4E-51 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS01165 d0ff261fde0bab61f4d9f7db950dc900 1038 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 966 1038 1.7E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS01165 d0ff261fde0bab61f4d9f7db950dc900 1038 Gene3D G3DSA:2.60.40.10 704 792 1.7E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS01165 d0ff261fde0bab61f4d9f7db950dc900 1038 SUPERFAMILY SSF49265 703 791 1.03E-9 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS01165 d0ff261fde0bab61f4d9f7db950dc900 1038 SMART SM00060 698 778 0.0062 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS01165 d0ff261fde0bab61f4d9f7db950dc900 1038 SMART SM00060 791 864 130.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS13585 72240d703e9f1576a1687d360b577237 89 SUPERFAMILY SSF54001 14 73 4.63E-12 T 23-04-2016 NIAKO_RS13585 72240d703e9f1576a1687d360b577237 89 PANTHER PTHR33490:SF1 14 65 1.4E-18 T 23-04-2016 NIAKO_RS13585 72240d703e9f1576a1687d360b577237 89 PANTHER PTHR33490 14 65 1.4E-18 T 23-04-2016 NIAKO_RS13585 72240d703e9f1576a1687d360b577237 89 Gene3D G3DSA:3.90.260.10 14 63 2.0E-5 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS13585 72240d703e9f1576a1687d360b577237 89 Pfam PF01841 Transglutaminase-like superfamily 14 61 9.2E-7 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 Gene3D G3DSA:3.30.230.10 82 163 3.3E-30 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 33.541 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 Gene3D G3DSA:3.30.160.20 15 78 6.1E-30 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 SUPERFAMILY SSF54768 15 81 7.01E-24 T 23-04-2016 NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 SUPERFAMILY SSF54211 84 163 1.97E-24 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 33 65 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 2.7E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 80 4.1E-30 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 162 4.5E-28 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22915 c2ba5bdbb240a4db74248be6a1f9fa35 172 PANTHER PTHR13718 15 162 4.4E-62 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 PANTHER PTHR11076 4 359 2.0E-111 T 23-04-2016 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Gene3D G3DSA:3.30.70.270 70 165 1.5E-23 T 23-04-2016 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Hamap MF_01113 DNA polymerase IV [dinB]. 6 351 31.463 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 SUPERFAMILY SSF56672 5 237 1.78E-72 T 23-04-2016 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Gene3D G3DSA:1.10.150.20 171 241 6.9E-18 T 23-04-2016 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 344 8.0E-19 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Pfam PF11798 IMS family HHH motif 171 200 6.4E-6 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Pfam PF00817 impB/mucB/samB family 13 157 9.2E-46 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 SUPERFAMILY SSF100879 242 340 4.71E-24 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS22605 47467127a88596965d451615fd1733f2 385 Gene3D G3DSA:3.30.1490.100 244 346 1.9E-24 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS37210 ab2296f6b023e72af3107e45de5b6b7a 328 SUPERFAMILY SSF53448 3 250 2.94E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37210 ab2296f6b023e72af3107e45de5b6b7a 328 PANTHER PTHR22916 1 194 2.4E-25 T 23-04-2016 NIAKO_RS37210 ab2296f6b023e72af3107e45de5b6b7a 328 Pfam PF00535 Glycosyl transferase family 2 7 133 6.9E-20 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS37210 ab2296f6b023e72af3107e45de5b6b7a 328 Gene3D G3DSA:3.90.550.10 7 195 2.2E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Pfam PF13715 CarboxypepD_reg-like domain 104 184 1.3E-15 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Gene3D G3DSA:2.170.130.10 188 328 1.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Gene3D G3DSA:2.60.40.1120 104 187 1.7E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF49464 103 181 1.96E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 104 1098 7.1E-185 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069:SF11 1008 1098 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069:SF11 930 970 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069:SF11 58 612 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069:SF11 632 908 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 300 330 7.4E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Gene3D G3DSA:2.40.170.20 394 462 1.1E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Gene3D G3DSA:2.40.170.20 504 862 1.1E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF56935 918 962 2.86E-74 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF56935 181 348 2.86E-74 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF56935 383 472 2.86E-74 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF56935 1009 1098 2.86E-74 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 SUPERFAMILY SSF56935 524 860 2.86E-74 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069 930 970 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069 58 612 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069 1008 1098 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 PANTHER PTHR30069 632 908 2.4E-214 T 23-04-2016 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Pfam PF07715 TonB-dependent Receptor Plug Domain 193 324 1.5E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS16955 cecd3353291167bab8a0133602b7eb21 1098 Pfam PF07660 Secretin and TonB N terminus short domain 34 85 7.4E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS21610 afb9a61c9ad88fa8e1916e7fb00c0e48 276 PANTHER PTHR31270:SF0 34 275 9.0E-84 T 23-04-2016 NIAKO_RS21610 afb9a61c9ad88fa8e1916e7fb00c0e48 276 SUPERFAMILY SSF50969 62 273 1.96E-17 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS21610 afb9a61c9ad88fa8e1916e7fb00c0e48 276 Gene3D G3DSA:2.130.10.10 86 265 9.6E-10 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS21610 afb9a61c9ad88fa8e1916e7fb00c0e48 276 PANTHER PTHR31270 34 275 9.0E-84 T 23-04-2016 NIAKO_RS21610 afb9a61c9ad88fa8e1916e7fb00c0e48 276 Pfam PF05096 Glutamine cyclotransferase 28 275 6.0E-86 T 23-04-2016 IPR007788 Glutamine cyclotransferase NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 Pfam PF00083 Sugar (and other) transporter 217 428 1.3E-58 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 287 304 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 84 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PANTHER PTHR23500 9 430 3.6E-153 T 23-04-2016 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 SUPERFAMILY SSF103473 14 429 4.19E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 Gene3D G3DSA:1.20.1250.20 15 214 1.4E-28 T 23-04-2016 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 Gene3D G3DSA:1.20.1250.20 234 430 2.2E-24 T 23-04-2016 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PRINTS PR00171 Sugar transporter signature 352 364 6.5E-24 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PRINTS PR00171 Sugar transporter signature 329 350 6.5E-24 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PRINTS PR00171 Sugar transporter signature 21 31 6.5E-24 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PRINTS PR00171 Sugar transporter signature 243 253 6.5E-24 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS02620 704352e28178a1a7aaf0d78e31780136 443 PRINTS PR00171 Sugar transporter signature 104 123 6.5E-24 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 NIAKO_RS08715 afd1284b1d5bd9136fd8b85d74ca2d5d 211 Pfam PF10546 P63C domain 79 169 3.4E-24 T 23-04-2016 IPR018874 Bacteriophage Mx8, p63, C-terminal NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PANTHER PTHR24322:SF397 7 135 3.2E-48 T 23-04-2016 NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PANTHER PTHR24322:SF397 151 185 3.2E-48 T 23-04-2016 NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 SUPERFAMILY SSF51735 2 246 9.62E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 Pfam PF00106 short chain dehydrogenase 3 193 4.6E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PANTHER PTHR24322 7 135 3.2E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PANTHER PTHR24322 151 185 3.2E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.3E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.3E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.3E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.3E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS29300 c17246769de1f3ae417db6d1e2924dba 284 Gene3D G3DSA:3.40.50.720 2 248 2.9E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16410 ac984b638551506e7bebb2c3f5ec03fa 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 94 6.2E-20 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS16410 ac984b638551506e7bebb2c3f5ec03fa 145 SUPERFAMILY SSF69118 5 142 3.36E-40 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS16410 ac984b638551506e7bebb2c3f5ec03fa 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 75 1.6E-16 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS16410 ac984b638551506e7bebb2c3f5ec03fa 145 Gene3D G3DSA:1.20.1290.10 2 142 2.0E-47 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS31545 625911951345135196446e15a5ca4acf 119 PANTHER PTHR35145 1 118 1.7E-38 T 23-04-2016 NIAKO_RS31545 625911951345135196446e15a5ca4acf 119 Pfam PF04237 YjbR 11 102 2.8E-30 T 23-04-2016 IPR007351 Uncharacterised protein YjbR NIAKO_RS31545 625911951345135196446e15a5ca4acf 119 SUPERFAMILY SSF142906 1 115 1.44E-41 T 23-04-2016 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 SUPERFAMILY SSF90123 3 336 7.98E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 Gene3D G3DSA:1.20.1560.10 2 332 5.4E-41 T 23-04-2016 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 Pfam PF00664 ABC transporter transmembrane region 16 304 2.5E-24 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 PANTHER PTHR24221 1 595 2.7E-148 T 23-04-2016 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 SUPERFAMILY SSF52540 346 586 2.19E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 PANTHER PTHR24221:SF138 1 595 2.7E-148 T 23-04-2016 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 SMART SM00382 374 562 2.5E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 Gene3D G3DSA:3.40.50.300 348 582 3.8E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 Pfam PF00005 ABC transporter 366 514 1.5E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS27450 f1157a2d3b1703ecbf1414bccd47a4b2 598 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.40.170.20 830 894 2.2E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.40.170.20 926 1007 2.2E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.40.170.20 242 258 2.2E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.40.170.20 314 783 2.2E-50 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 1.2E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532:SF57 808 1006 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532:SF57 475 544 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532:SF57 568 791 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532:SF57 9 368 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532 808 1006 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532 475 544 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532 568 791 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 PANTHER PTHR11532 9 368 5.3E-180 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.170.130.10 123 241 4.3E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Gene3D G3DSA:2.60.40.1120 29 122 1.5E-18 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1007 2.4E-202 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 238 1.7E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 103 2.4E-16 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF49452 22 103 8.44E-19 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF56935 850 894 7.33E-91 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF56935 926 1007 7.33E-91 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF56935 380 783 7.33E-91 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF56935 305 350 7.33E-91 T 23-04-2016 NIAKO_RS18750 a96844e966abc8fb9573cef38d6fb2e4 1008 SUPERFAMILY SSF56935 112 262 7.33E-91 T 23-04-2016 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 Gene3D G3DSA:3.40.50.2300 62 183 1.7E-37 T 23-04-2016 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 Pfam PF13377 Periplasmic binding protein-like domain 180 344 1.2E-30 T 23-04-2016 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 Gene3D G3DSA:1.10.260.40 11 61 4.4E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.3E-11 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 SMART SM00354 9 79 1.6E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 Gene3D G3DSA:3.40.50.2300 184 320 4.8E-41 T 23-04-2016 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 PANTHER PTHR30146 9 344 2.2E-95 T 23-04-2016 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 SUPERFAMILY SSF47413 10 68 1.13E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25795 2b0bcd32c2b00c87dd1b9bcf9ba8c915 344 SUPERFAMILY SSF53822 69 344 8.64E-64 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 Pfam PF00186 Dihydrofolate reductase 3 162 4.7E-58 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 Gene3D G3DSA:3.40.430.10 2 164 8.8E-59 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PIRSF PIRSF000194 1 165 1.0E-57 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PANTHER PTHR22778:SF16 1 164 2.7E-45 T 23-04-2016 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.6E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.6E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.6E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.6E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 PANTHER PTHR22778 1 164 2.7E-45 T 23-04-2016 NIAKO_RS22525 9a4d18a40496e2dcadeeb91575182bf9 166 SUPERFAMILY SSF53597 1 163 9.03E-57 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 PANTHER PTHR38165 2 421 2.1E-26 T 23-04-2016 NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 SUPERFAMILY SSF49695 425 508 1.03E-19 T 23-04-2016 IPR011024 Gamma-crystallin-related NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 Pfam PF16483 Beta-1,3-glucanase 37 413 1.2E-84 T 23-04-2016 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 663 731 1.9E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 SMART SM00247 424 508 6.4E-4 T 23-04-2016 IPR001064 Beta/gamma crystallin NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 SUPERFAMILY SSF49785 514 637 1.7E-34 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 Pfam PF03422 Carbohydrate binding module (family 6) 518 636 5.2E-29 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 Gene3D G3DSA:2.60.120.260 515 636 4.3E-38 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 Gene3D G3DSA:2.60.20.10 424 509 4.2E-30 T 23-04-2016 NIAKO_RS04020 2e1bb12f1fe65b7ef3397d66471a4cac 731 SMART SM00606 510 637 2.1E-33 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 PANTHER PTHR26402 3 148 3.3E-20 T 23-04-2016 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 Gene3D G3DSA:3.40.50.2300 4 121 3.2E-21 T 23-04-2016 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 SMART SM00448 3 113 1.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 Pfam PF00072 Response regulator receiver domain 6 113 2.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 Gene3D G3DSA:2.40.50.40 144 212 3.2E-13 T 23-04-2016 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 PANTHER PTHR26402:SF501 3 148 3.3E-20 T 23-04-2016 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 SMART SM00850 152 248 9.7E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 SUPERFAMILY SSF52172 6 126 1.99E-22 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03035 4aa69390ef7b93718041c189798b6ce7 249 Pfam PF04397 LytTr DNA-binding domain 155 247 4.5E-12 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 PANTHER PTHR30097:SF4 42 356 2.7E-72 T 23-04-2016 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 281 5.3E-47 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 352 2.9E-50 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 PANTHER PTHR30097 42 356 2.7E-72 T 23-04-2016 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 SUPERFAMILY SSF111369 55 286 5.62E-25 T 23-04-2016 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 Gene3D G3DSA:2.40.50.100 69 102 1.6E-10 T 23-04-2016 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 Gene3D G3DSA:2.40.50.100 173 204 1.6E-10 T 23-04-2016 NIAKO_RS23515 c55ef6a07e7f8efb1c347f46c8314d3e 358 Gene3D G3DSA:1.20.1600.10 103 162 7.3E-4 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 Gene3D G3DSA:3.40.720.10 45 487 7.4E-109 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 ProSitePatterns PS00523 Sulfatases signature 1. 91 103 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 SUPERFAMILY SSF53649 47 579 1.45E-129 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 Gene3D G3DSA:3.30.1120.10 491 584 1.2E-21 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 Pfam PF00884 Sulfatase 47 460 2.1E-79 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342:SF201 298 353 8.3E-190 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342:SF201 19 268 8.3E-190 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342:SF201 404 600 8.3E-190 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342 298 353 8.3E-190 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342 19 268 8.3E-190 T 23-04-2016 NIAKO_RS06775 3940cba5f46e371458912c58e2001496 603 PANTHER PTHR10342 404 600 8.3E-190 T 23-04-2016 NIAKO_RS08885 e1d6f25595ebb874dc67f1fdb00ea235 231 Pfam PF08445 FR47-like protein 139 221 8.5E-14 T 23-04-2016 IPR013653 FR47-like GO:0016747 NIAKO_RS08885 e1d6f25595ebb874dc67f1fdb00ea235 231 Gene3D G3DSA:3.40.630.30 101 222 3.7E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS08885 e1d6f25595ebb874dc67f1fdb00ea235 231 SUPERFAMILY SSF55729 93 223 3.78E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS09860 585bbd3a15df3a0b933d49f977e30aa9 254 Pfam PF06271 RDD family 20 160 6.6E-18 T 23-04-2016 IPR010432 RDD NIAKO_RS09860 585bbd3a15df3a0b933d49f977e30aa9 254 PANTHER PTHR38480 137 251 4.6E-24 T 23-04-2016 NIAKO_RS09860 585bbd3a15df3a0b933d49f977e30aa9 254 PANTHER PTHR38480 1 120 4.6E-24 T 23-04-2016 NIAKO_RS09860 585bbd3a15df3a0b933d49f977e30aa9 254 PANTHER PTHR38480:SF1 137 251 4.6E-24 T 23-04-2016 NIAKO_RS09860 585bbd3a15df3a0b933d49f977e30aa9 254 PANTHER PTHR38480:SF1 1 120 4.6E-24 T 23-04-2016 NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 368 433 1.7E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 Gene3D G3DSA:2.60.40.670 190 263 3.9E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 Gene3D G3DSA:2.60.120.260 33 180 8.9E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 Pfam PF04862 Protein of unknown function (DUF642) 48 179 1.4E-7 T 23-04-2016 IPR006946 Domain of unknown function DUF642 NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 SUPERFAMILY SSF49785 31 180 2.83E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS25840 cfddd26bec1f7ef2e9a87689e207def4 447 SUPERFAMILY SSF49299 190 265 3.53E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 SUPERFAMILY SSF54001 7 264 1.25E-42 T 23-04-2016 NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 SMART SM00460 171 237 3.8E-17 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 Pfam PF01841 Transglutaminase-like superfamily 139 235 5.7E-24 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 Gene3D G3DSA:3.90.260.10 174 239 2.3E-16 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 81 3.7E-18 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 PANTHER PTHR33490:SF6 1 286 4.6E-52 T 23-04-2016 NIAKO_RS31295 c3aa910f241c5e889e7e24dfc22e4a06 321 PANTHER PTHR33490 1 286 4.6E-52 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 SUPERFAMILY SSF55681 65 250 1.66E-61 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 SUPERFAMILY SSF55681 8 35 1.66E-61 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 Gene3D G3DSA:3.90.1550.10 5 248 2.5E-74 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 PANTHER PTHR10993 8 252 3.9E-81 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 Hamap MF_00013 Octanoyltransferase [lipB]. 8 251 34.169 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 PIRSF PIRSF016262 4 254 2.7E-64 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 Pfam PF03099 Biotin/lipoate A/B protein ligase family 92 203 1.6E-6 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 113 166 5.0E-11 T 23-04-2016 NIAKO_RS21720 c2ec4d512e99662ffec8a4b2031a5d4f 255 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 66 248 2.1E-49 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 PANTHER PTHR30303:SF0 10 344 1.5E-143 T 23-04-2016 NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 15 344 4.6E-128 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 Gene3D G3DSA:3.30.1330.10 44 162 6.5E-19 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 PANTHER PTHR30303 10 344 1.5E-143 T 23-04-2016 NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 Gene3D G3DSA:3.90.650.10 167 322 4.7E-18 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 PIRSF PIRSF005644 10 344 7.3E-116 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 316 7.5E-24 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 SUPERFAMILY SSF55326 16 161 2.27E-27 T 23-04-2016 NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 SUPERFAMILY SSF56042 165 340 2.24E-36 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NIAKO_RS06245 f22e9133b63eab52401c4fc21852bb37 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 157 7.1E-14 T 23-04-2016 IPR016188 PurM-like, N-terminal domain NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 PIRSF PIRSF002211 1 60 2.9E-25 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 7.4E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 PANTHER PTHR15892 1 60 2.0E-21 T 23-04-2016 NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 Gene3D G3DSA:3.30.1390.20 1 58 2.6E-28 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.3E-24 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.237 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22910 b23f6e8c037f9ba01ab52723bc851655 60 SUPERFAMILY SSF55129 1 59 2.75E-20 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 SMART SM00342 204 287 1.6E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 7.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 7.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 Gene3D G3DSA:1.10.10.60 187 240 8.7E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 Pfam PF02311 AraC-like ligand binding domain 54 169 2.5E-16 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 SUPERFAMILY SSF46689 189 238 2.53E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 PANTHER PTHR11019 19 289 2.8E-43 T 23-04-2016 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 SUPERFAMILY SSF46689 241 289 7.17E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 Pfam PF12833 Helix-turn-helix domain 211 288 1.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 Gene3D G3DSA:2.60.120.280 42 172 1.3E-25 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 Gene3D G3DSA:1.10.10.60 241 290 1.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 SUPERFAMILY SSF51215 8 172 3.14E-22 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS03480 60c6c84ccc37c1a5b0c1b560cc8cf37d 292 PANTHER PTHR11019:SF45 19 289 2.8E-43 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342 300 354 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342 402 587 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342 7 257 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 ProSitePatterns PS00523 Sulfatases signature 1. 80 92 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 SUPERFAMILY SSF53649 36 565 3.79E-126 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342:SF201 300 354 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342:SF201 402 587 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 PANTHER PTHR10342:SF201 7 257 1.6E-192 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 Pfam PF00884 Sulfatase 36 458 8.0E-79 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 Gene3D G3DSA:3.30.1120.10 490 574 9.9E-17 T 23-04-2016 NIAKO_RS18410 656af5efe0166963f2f6359e85677a33 775 Gene3D G3DSA:3.40.720.10 35 486 1.1E-102 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 Gene3D G3DSA:3.40.630.10 305 389 3.2E-100 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 Gene3D G3DSA:3.40.630.10 3 185 3.2E-100 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 Pfam PF01546 Peptidase family M20/M25/M40 77 387 1.4E-34 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 SUPERFAMILY SSF53187 305 390 3.29E-83 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 SUPERFAMILY SSF53187 6 204 3.29E-83 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 PANTHER PTHR11014:SF63 7 387 1.8E-150 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 Gene3D G3DSA:3.30.70.360 188 304 2.7E-38 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 PIRSF PIRSF005962 3 392 4.5E-124 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 382 5.9E-116 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 PANTHER PTHR11014 7 387 1.8E-150 T 23-04-2016 NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 Pfam PF07687 Peptidase dimerisation domain 194 285 1.8E-13 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS00745 b82547e2bb6b3242790c0261fd3c4d62 395 SUPERFAMILY SSF55031 188 305 2.22E-29 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS36780 f23bbbeec86c5941f3d57e53fdc601e3 239 SUPERFAMILY SSF53335 40 185 1.03E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS36780 f23bbbeec86c5941f3d57e53fdc601e3 239 PANTHER PTHR10108 27 164 5.0E-20 T 23-04-2016 NIAKO_RS36780 f23bbbeec86c5941f3d57e53fdc601e3 239 Gene3D G3DSA:3.40.50.150 25 235 2.5E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS36780 f23bbbeec86c5941f3d57e53fdc601e3 239 PANTHER PTHR10108:SF779 27 164 5.0E-20 T 23-04-2016 NIAKO_RS36780 f23bbbeec86c5941f3d57e53fdc601e3 239 Pfam PF13489 Methyltransferase domain 37 163 2.8E-13 T 23-04-2016 NIAKO_RS33015 7a32b5dbfd059be524712ef99b641428 408 PANTHER PTHR30572 1 408 2.5E-117 T 23-04-2016 NIAKO_RS33015 7a32b5dbfd059be524712ef99b641428 408 PANTHER PTHR30572:SF7 1 408 2.5E-117 T 23-04-2016 NIAKO_RS33015 7a32b5dbfd059be524712ef99b641428 408 Pfam PF12704 MacB-like periplasmic core domain 22 247 4.0E-40 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS33015 7a32b5dbfd059be524712ef99b641428 408 Pfam PF02687 FtsX-like permease family 289 401 3.0E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS03605 dbfcf70ceaf0c1da643758bfc1a4f8aa 512 Gene3D G3DSA:1.25.40.10 202 325 1.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03605 dbfcf70ceaf0c1da643758bfc1a4f8aa 512 Gene3D G3DSA:1.25.40.10 361 448 1.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03605 dbfcf70ceaf0c1da643758bfc1a4f8aa 512 SUPERFAMILY SSF48452 17 511 1.77E-105 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03605 dbfcf70ceaf0c1da643758bfc1a4f8aa 512 Pfam PF07980 SusD family 273 511 1.6E-27 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS03605 dbfcf70ceaf0c1da643758bfc1a4f8aa 512 Pfam PF14322 Starch-binding associating with outer membrane 23 220 5.7E-19 T 23-04-2016 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 5.4E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 174 196 5.4E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 352 363 5.4E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 90 104 5.4E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PANTHER PTHR11606 25 467 1.5E-221 T 23-04-2016 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 183 386 2.1E-55 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PANTHER PTHR11606:SF13 25 467 1.5E-221 T 23-04-2016 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 SUPERFAMILY SSF53223 8 185 5.44E-58 T 23-04-2016 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 SUPERFAMILY SSF51735 187 468 2.93E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 162 7.5E-54 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 PIRSF PIRSF000185 3 469 3.1E-142 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 Gene3D G3DSA:3.40.192.10 44 181 9.2E-54 T 23-04-2016 NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 Gene3D G3DSA:3.40.50.720 183 468 3.8E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24730 ea15429df52db8c9b52841f61945e1ce 469 SMART SM00839 185 466 3.3E-82 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 SUPERFAMILY SSF55920 172 463 1.83E-55 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 123 7.0E-25 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 SMART SM01011 6 138 3.3E-30 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 Gene3D G3DSA:3.90.230.10 175 463 4.7E-61 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 PANTHER PTHR10804:SF17 377 464 6.8E-114 T 23-04-2016 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 PANTHER PTHR10804:SF17 11 360 6.8E-114 T 23-04-2016 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 Gene3D G3DSA:3.40.350.10 6 174 6.2E-33 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 PANTHER PTHR10804 377 464 6.8E-114 T 23-04-2016 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 PANTHER PTHR10804 11 360 6.8E-114 T 23-04-2016 NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 Pfam PF00557 Metallopeptidase family M24 178 443 2.6E-45 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS26570 92b15e33301334f9ff0fbd5450500ac0 466 SUPERFAMILY SSF53092 5 171 7.85E-33 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 Pfam PF10566 Glycoside hydrolase 97 287 499 3.0E-53 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 Gene3D G3DSA:3.20.20.70 303 417 2.2E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 525 618 1.0E-31 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 SUPERFAMILY SSF51445 296 482 1.32E-14 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 24 270 1.3E-52 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS15290 2777c0ba9cb17a3fc3dbc438442bfc39 628 PANTHER PTHR35803 1 622 2.3E-167 T 23-04-2016 NIAKO_RS35455 402da7faa94d2b582e1e4b05b0b3b2fe 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 198 4.1E-32 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like NIAKO_RS35455 402da7faa94d2b582e1e4b05b0b3b2fe 203 PANTHER PTHR31573:SF1 17 201 1.4E-63 T 23-04-2016 NIAKO_RS35455 402da7faa94d2b582e1e4b05b0b3b2fe 203 PANTHER PTHR31573 17 201 1.4E-63 T 23-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 NIAKO_RS35455 402da7faa94d2b582e1e4b05b0b3b2fe 203 SUPERFAMILY SSF51197 8 200 1.25E-61 T 23-04-2016 NIAKO_RS35455 402da7faa94d2b582e1e4b05b0b3b2fe 203 Gene3D G3DSA:2.60.120.590 23 201 6.2E-42 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 446 474 4900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 309 330 15.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 275 296 1200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 248 274 8.8 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 336 357 22.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SMART SM00710 419 440 6500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 PANTHER PTHR31339 40 151 4.5E-122 T 23-04-2016 NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 PANTHER PTHR31339 204 511 4.5E-122 T 23-04-2016 NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 PANTHER PTHR31339:SF0 40 151 4.5E-122 T 23-04-2016 NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 PANTHER PTHR31339:SF0 204 511 4.5E-122 T 23-04-2016 NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 Pfam PF12708 Pectate lyase superfamily protein 40 120 1.9E-8 T 23-04-2016 IPR024535 Pectate lyase superfamily protein NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 Gene3D G3DSA:2.160.20.10 211 530 1.2E-117 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 Gene3D G3DSA:2.160.20.10 26 156 1.2E-117 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SUPERFAMILY SSF51126 208 466 1.28E-97 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 SUPERFAMILY SSF51126 28 165 1.28E-97 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26040 108d8ae1b451729729e9cc42e60ea4f6 547 Pfam PF00295 Glycosyl hydrolases family 28 216 394 2.7E-28 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 SUPERFAMILY SSF56601 27 360 2.0E-76 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 PANTHER PTHR22935 29 426 2.0E-78 T 23-04-2016 NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 Pfam PF00144 Beta-lactamase 30 357 7.1E-60 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 Gene3D G3DSA:3.40.710.10 37 375 5.0E-76 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 Pfam PF11954 Domain of unknown function (DUF3471) 404 491 2.8E-9 T 23-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal NIAKO_RS03140 1e948a4c19223855769d10a1dc1df33a 506 PANTHER PTHR22935:SF68 29 426 2.0E-78 T 23-04-2016 NIAKO_RS13150 4843f2022c2ef71a6e3654fe86a06aac 353 PANTHER PTHR30273:SF2 1 350 3.2E-45 T 23-04-2016 NIAKO_RS13150 4843f2022c2ef71a6e3654fe86a06aac 353 Pfam PF16344 Domain of unknown function (DUF4974) 239 345 2.5E-16 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS13150 4843f2022c2ef71a6e3654fe86a06aac 353 PANTHER PTHR30273 1 350 3.2E-45 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13150 4843f2022c2ef71a6e3654fe86a06aac 353 PIRSF PIRSF018266 1 349 6.4E-43 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13150 4843f2022c2ef71a6e3654fe86a06aac 353 Pfam PF04773 FecR protein 132 216 9.9E-15 T 23-04-2016 IPR006860 FecR protein NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Gene3D G3DSA:2.60.120.260 16 175 3.9E-39 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 SUPERFAMILY SSF49785 847 951 3.86E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 311 449 7.0E-5 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Pfam PF00703 Glycosyl hydrolases family 2 201 308 5.3E-13 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 PANTHER PTHR10066:SF46 614 669 1.2E-159 T 23-04-2016 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 PANTHER PTHR10066:SF46 5 596 1.2E-159 T 23-04-2016 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Pfam PF16355 Domain of unknown function (DUF4982) 618 678 1.7E-14 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Gene3D G3DSA:2.60.40.1560 607 693 3.7E-16 T 23-04-2016 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Gene3D G3DSA:3.20.20.80 311 597 7.2E-19 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 SUPERFAMILY SSF49785 5 183 5.59E-39 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Gene3D G3DSA:2.60.40.320 176 309 2.6E-18 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 SUPERFAMILY SSF51445 311 596 2.55E-24 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 53 180 1.4E-13 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 SUPERFAMILY SSF49303 207 308 1.58E-13 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 PANTHER PTHR10066 614 669 1.2E-159 T 23-04-2016 NIAKO_RS10240 13a873c2a307e235dbf2f8c11944bfa3 983 PANTHER PTHR10066 5 596 1.2E-159 T 23-04-2016 NIAKO_RS23795 878fc08ed2902efb7bc16242935605d1 115 PANTHER PTHR33204:SF8 1 115 2.7E-37 T 23-04-2016 NIAKO_RS23795 878fc08ed2902efb7bc16242935605d1 115 Pfam PF01638 HxlR-like helix-turn-helix 20 105 4.2E-28 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS23795 878fc08ed2902efb7bc16242935605d1 115 SUPERFAMILY SSF46785 7 107 1.12E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23795 878fc08ed2902efb7bc16242935605d1 115 Gene3D G3DSA:1.10.10.10 3 110 1.5E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23795 878fc08ed2902efb7bc16242935605d1 115 PANTHER PTHR33204 1 115 2.7E-37 T 23-04-2016 NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 SMART SM00487 99 296 9.9E-8 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 SUPERFAMILY SSF52540 83 303 3.33E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 Gene3D G3DSA:3.40.50.300 426 566 9.0E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 SMART SM00490 469 557 4.7E-12 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 Pfam PF00176 SNF2 family N-terminal domain 123 291 6.0E-10 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 PANTHER PTHR10799:SF688 102 408 5.1E-35 T 23-04-2016 NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 PANTHER PTHR10799:SF688 431 570 5.1E-35 T 23-04-2016 NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 Gene3D G3DSA:3.40.50.300 97 271 1.5E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 SUPERFAMILY SSF52540 224 286 3.41E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 SUPERFAMILY SSF52540 426 599 3.41E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 Pfam PF00271 Helicase conserved C-terminal domain 439 557 4.1E-16 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 PANTHER PTHR10799 102 408 5.1E-35 T 23-04-2016 NIAKO_RS23645 f235efb82ef05cf99ca52f0cf555626f 961 PANTHER PTHR10799 431 570 5.1E-35 T 23-04-2016 NIAKO_RS10995 a31953a18601460c2f885dce3a6e0b66 444 Gene3D G3DSA:3.40.50.2000 181 382 3.2E-37 T 23-04-2016 NIAKO_RS10995 a31953a18601460c2f885dce3a6e0b66 444 PANTHER PTHR12526 3 409 9.0E-67 T 23-04-2016 NIAKO_RS10995 a31953a18601460c2f885dce3a6e0b66 444 SUPERFAMILY SSF53756 21 409 4.32E-86 T 23-04-2016 NIAKO_RS10995 a31953a18601460c2f885dce3a6e0b66 444 Pfam PF13439 Glycosyltransferase Family 4 23 199 1.4E-27 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS10995 a31953a18601460c2f885dce3a6e0b66 444 Pfam PF00534 Glycosyl transferases group 1 210 384 3.9E-36 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 Gene3D G3DSA:3.10.50.40 227 348 2.3E-27 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 Gene3D G3DSA:3.10.50.40 116 223 1.8E-25 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 PANTHER PTHR10657:SF11 83 224 8.1E-18 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 SUPERFAMILY SSF54534 228 332 5.36E-20 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 PANTHER PTHR10657 83 224 8.1E-18 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 SUPERFAMILY SSF54534 121 222 3.01E-21 T 23-04-2016 NIAKO_RS29965 71563d716d2398c65b2bae2f30a410ea 648 Pfam PF13616 PPIC-type PPIASE domain 216 326 7.0E-21 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.40.170.20 457 521 5.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.40.170.20 969 1025 5.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.40.170.20 1079 1086 5.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.40.170.20 564 934 5.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.40.170.20 347 379 5.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Pfam PF07715 TonB-dependent Receptor Plug Domain 213 347 1.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.60.40.1120 119 206 1.2E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF49464 120 215 4.05E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF56935 586 934 2.64E-69 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF56935 201 370 2.64E-69 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF56935 1085 1097 2.64E-69 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF56935 448 536 2.64E-69 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 SUPERFAMILY SSF56935 992 1035 2.64E-69 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 118 1177 6.3E-158 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532:SF51 656 1176 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532:SF51 116 287 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532:SF51 586 633 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532:SF51 314 523 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 323 353 2.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532 656 1176 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532 116 287 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532 586 633 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 PANTHER PTHR11532 314 523 1.7E-144 T 23-04-2016 NIAKO_RS12495 60917c540f0120df81ba440456d18598 1178 Gene3D G3DSA:2.170.130.10 207 346 5.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 PANTHER PTHR31223:SF0 10 186 1.4E-72 T 23-04-2016 NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 Gene3D G3DSA:3.40.50.450 7 186 2.3E-63 T 23-04-2016 NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 PANTHER PTHR31223 10 186 1.4E-72 T 23-04-2016 NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 Pfam PF03641 Possible lysine decarboxylase 56 186 3.7E-39 T 23-04-2016 IPR031100 LOG family NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 SUPERFAMILY SSF102405 10 186 7.02E-57 T 23-04-2016 NIAKO_RS27105 7746335f863bcbaf99ace6bc8ff54d78 187 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 13 186 1.7E-52 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 Pfam PF01965 DJ-1/PfpI family 40 165 2.1E-11 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 SUPERFAMILY SSF52317 1 197 9.82E-32 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 PANTHER PTHR11019 38 320 8.2E-40 T 23-04-2016 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 SUPERFAMILY SSF46689 270 319 5.38E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 Gene3D G3DSA:1.10.10.60 270 319 2.5E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 Pfam PF12833 Helix-turn-helix domain 239 317 3.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 SMART SM00342 232 316 1.9E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 Gene3D G3DSA:1.10.10.60 222 269 6.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 SUPERFAMILY SSF46689 216 267 3.0E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 PANTHER PTHR11019:SF68 38 320 8.2E-40 T 23-04-2016 NIAKO_RS25550 d8488490ce0465c4f71ede77b94fb6a5 321 Gene3D G3DSA:3.40.50.880 2 221 2.6E-32 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 131 8.1E-54 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 SUPERFAMILY SSF53137 21 134 2.04E-45 T 23-04-2016 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 PANTHER PTHR11759 26 134 7.7E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 134 31.35 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 Pfam PF00411 Ribosomal protein S11 24 133 1.0E-45 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 Gene3D G3DSA:3.30.420.80 14 134 1.1E-48 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS21860 8d4d58dce70b38adf90830028cc0c5d4 134 PIRSF PIRSF002131 1 134 6.4E-50 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS31995 73d33a55ef5103e0ce5b6427034c6ba0 240 PANTHER PTHR11054 2 238 3.1E-85 T 23-04-2016 NIAKO_RS31995 73d33a55ef5103e0ce5b6427034c6ba0 240 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 4 238 3.0E-64 T 23-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NIAKO_RS31995 73d33a55ef5103e0ce5b6427034c6ba0 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 7 228 6.0E-67 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 NIAKO_RS31995 73d33a55ef5103e0ce5b6427034c6ba0 240 SUPERFAMILY SSF100950 2 238 1.38E-66 T 23-04-2016 NIAKO_RS31995 73d33a55ef5103e0ce5b6427034c6ba0 240 Gene3D G3DSA:3.40.50.1360 2 238 2.8E-74 T 23-04-2016 NIAKO_RS30685 28ac36ea9548b7a4b0c59cd760ef87cb 251 PANTHER PTHR38477 69 251 1.2E-58 T 23-04-2016 NIAKO_RS30685 28ac36ea9548b7a4b0c59cd760ef87cb 251 PANTHER PTHR38477:SF1 69 251 1.2E-58 T 23-04-2016 NIAKO_RS30685 28ac36ea9548b7a4b0c59cd760ef87cb 251 Pfam PF13645 L,D-transpeptidase catalytic domain 69 236 1.6E-63 T 23-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain NIAKO_RS19015 a43abbfbd32b38beb0aea847a82d007c 232 Gene3D G3DSA:3.30.870.10 13 141 8.6E-10 T 23-04-2016 NIAKO_RS19015 a43abbfbd32b38beb0aea847a82d007c 232 SUPERFAMILY SSF56024 12 141 6.67E-9 T 23-04-2016 NIAKO_RS19015 a43abbfbd32b38beb0aea847a82d007c 232 Pfam PF13091 PLD-like domain 15 134 2.9E-9 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 PANTHER PTHR26402 6 137 3.0E-12 T 23-04-2016 NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 SMART SM00448 6 130 5.8E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 Gene3D G3DSA:3.40.50.2300 7 140 1.2E-19 T 23-04-2016 NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 Pfam PF00072 Response regulator receiver domain 8 133 3.7E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 PANTHER PTHR26402:SF483 6 137 3.0E-12 T 23-04-2016 NIAKO_RS14405 7493b549e527cb6a75a44af84e2a9158 145 SUPERFAMILY SSF52172 7 139 1.71E-17 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS31060 b1abe396809702be6fd67d14eae8673c 175 Pfam PF13521 AAA domain 3 161 3.3E-28 T 23-04-2016 NIAKO_RS31060 b1abe396809702be6fd67d14eae8673c 175 Gene3D G3DSA:3.40.50.300 1 166 2.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31060 b1abe396809702be6fd67d14eae8673c 175 PANTHER PTHR37512 1 175 5.0E-43 T 23-04-2016 NIAKO_RS31060 b1abe396809702be6fd67d14eae8673c 175 SUPERFAMILY SSF52540 2 169 6.23E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 175 1.2E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 Pfam PF08281 Sigma-70, region 4 120 171 1.2E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 Gene3D G3DSA:1.10.10.10 116 176 2.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 PANTHER PTHR30173:SF21 1 176 1.9E-34 T 23-04-2016 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 Pfam PF04542 Sigma-70 region 2 25 93 5.2E-14 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 PANTHER PTHR30173 1 176 1.9E-34 T 23-04-2016 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 SUPERFAMILY SSF88946 2 107 8.16E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 Gene3D G3DSA:1.10.1740.10 3 111 7.3E-23 T 23-04-2016 NIAKO_RS32665 5bcb670173c48e3febaf5ebf82f235d7 180 SUPERFAMILY SSF88659 113 176 6.76E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 Gene3D G3DSA:3.40.390.10 299 418 3.5E-103 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 Gene3D G3DSA:3.40.390.10 458 671 3.5E-103 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 Pfam PF05649 Peptidase family M13 38 415 3.3E-87 T 23-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 Pfam PF01431 Peptidase family M13 468 667 4.6E-70 T 23-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 SUPERFAMILY SSF55486 30 671 6.41E-188 T 23-04-2016 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PANTHER PTHR11733:SF65 32 671 4.8E-180 T 23-04-2016 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PANTHER PTHR11733 32 671 4.8E-180 T 23-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 569 580 4.3E-19 T 23-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 514 4.3E-19 T 23-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 477 489 4.3E-19 T 23-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 NIAKO_RS18795 88178ffcb16ea24fd3f7de7c5584d6a4 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 459 471 4.3E-19 T 23-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 PANTHER PTHR31956:SF6 384 567 7.3E-105 T 23-04-2016 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 PANTHER PTHR31956:SF6 2 285 7.3E-105 T 23-04-2016 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 PANTHER PTHR31956 384 567 7.3E-105 T 23-04-2016 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 PANTHER PTHR31956 2 285 7.3E-105 T 23-04-2016 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 Pfam PF05506 Domain of unknown function (DUF756) 740 828 2.2E-10 T 23-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 Pfam PF05506 Domain of unknown function (DUF756) 632 734 9.7E-17 T 23-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 842 2.0E-236 T 23-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 Pfam PF04185 Phosphoesterase family 46 272 1.4E-43 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS14030 640ded84294e2106179a5562aa920342 846 Pfam PF04185 Phosphoesterase family 354 540 8.4E-43 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PANTHER PTHR11999 1 500 4.5E-184 T 23-04-2016 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 Gene3D G3DSA:3.40.640.10 112 390 7.8E-94 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 377 392 1.9E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 420 439 1.9E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 102 121 1.9E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 142 161 1.9E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 SUPERFAMILY SSF53383 35 506 6.74E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 81 438 1.0E-63 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 PANTHER PTHR11999:SF106 1 500 4.5E-184 T 23-04-2016 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 Gene3D G3DSA:1.20.1650.10 19 101 6.3E-17 T 23-04-2016 NIAKO_RS13595 936af7414aadcf65f1a91cdf3413710a 517 Gene3D G3DSA:3.90.1150.10 391 506 2.5E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815:SF13 568 736 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815:SF13 97 230 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815:SF13 265 548 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815:SF13 752 764 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815 568 736 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815 97 230 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815 752 764 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 PANTHER PTHR12815 265 548 2.3E-80 T 23-04-2016 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 Pfam PF01103 Surface antigen 366 737 3.3E-32 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS28745 bc90444148b4346cc6b45af2859346f2 764 Gene3D G3DSA:2.40.160.50 364 738 1.9E-17 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Pfam PF13715 CarboxypepD_reg-like domain 34 113 3.5E-14 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.60.40.1120 34 116 4.9E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF49464 32 111 2.88E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.170.130.10 117 227 9.0E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 433 567 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 895 938 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 972 1075 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 318 391 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 111 256 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 SUPERFAMILY SSF56935 594 812 2.43E-83 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532:SF57 441 492 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532:SF57 1055 1073 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532:SF57 1 374 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532:SF57 518 548 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532:SF57 593 1034 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 226 4.9E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532 441 492 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532 1055 1073 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532 1 374 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532 518 548 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 PANTHER PTHR11532 593 1034 7.0E-248 T 23-04-2016 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 33 1075 6.4E-263 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 202 232 5.9E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.40.170.20 228 248 5.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.40.170.20 318 386 5.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.40.170.20 981 1075 5.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.40.170.20 427 817 5.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11755 a61b77221dd49d62ee6ceeb0caab7764 1075 Gene3D G3DSA:2.40.170.20 903 948 5.5E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS27300 d16478d83fcebd761cdd6a77d786b4c5 567 Pfam PF14052 Capsule assembly protein Wzi 296 532 2.2E-8 T 23-04-2016 IPR026950 Capsule assembly protein Wzi NIAKO_RS26205 f61984ebf48d089974e24bea32bf78b9 276 PANTHER PTHR34216:SF3 29 197 4.3E-28 T 23-04-2016 NIAKO_RS26205 f61984ebf48d089974e24bea32bf78b9 276 SUPERFAMILY SSF88713 43 248 8.06E-32 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS26205 f61984ebf48d089974e24bea32bf78b9 276 Gene3D G3DSA:3.20.20.370 57 224 4.6E-24 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS26205 f61984ebf48d089974e24bea32bf78b9 276 PANTHER PTHR34216 29 197 4.3E-28 T 23-04-2016 NIAKO_RS26205 f61984ebf48d089974e24bea32bf78b9 276 Pfam PF01522 Polysaccharide deacetylase 83 202 1.9E-18 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS14000 f7bfe32bb292aa3a2d353e967a6a5f9c 638 Gene3D G3DSA:2.60.40.10 468 550 1.8E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS14000 f7bfe32bb292aa3a2d353e967a6a5f9c 638 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 562 638 1.6E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Pfam PF00664 ABC transporter transmembrane region 176 443 1.0E-12 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 PANTHER PTHR24221:SF138 144 728 8.7E-140 T 23-04-2016 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Pfam PF00005 ABC transporter 507 656 9.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Gene3D G3DSA:3.90.70.10 11 127 7.4E-18 T 23-04-2016 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 SMART SM00382 516 702 3.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Pfam PF03412 Peptidase C39 family 4 127 8.6E-30 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 ProSitePatterns PS00211 ABC transporters family signature. 628 642 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Gene3D G3DSA:3.40.50.300 489 726 2.2E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 SUPERFAMILY SSF52540 481 726 5.85E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 Gene3D G3DSA:1.20.1560.10 164 468 2.1E-45 T 23-04-2016 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 PANTHER PTHR24221 144 728 8.7E-140 T 23-04-2016 NIAKO_RS04160 272cb231207a9cd87a868fd94c037e50 731 SUPERFAMILY SSF90123 163 471 4.45E-42 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 471 540 1.5E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 131 168 0.002 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 351 388 1.3E-4 T 23-04-2016 IPR013431 Delta-60 repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Gene3D G3DSA:2.120.10.30 189 431 8.1E-16 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Gene3D G3DSA:2.120.10.30 18 188 2.8E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 PANTHER PTHR35580 11 548 2.4E-28 T 23-04-2016 NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 PANTHER PTHR35580:SF1 11 548 2.4E-28 T 23-04-2016 NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 SUPERFAMILY SSF50998 278 438 4.63E-7 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Pfam PF06739 Beta-propeller repeat 116 146 2.5E-5 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Pfam PF06739 Beta-propeller repeat 9 43 2.4E-6 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Pfam PF06739 Beta-propeller repeat 339 370 9.7E-6 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 Pfam PF06739 Beta-propeller repeat 176 201 6.8E-5 T 23-04-2016 IPR010620 Beta-propeller repeat NIAKO_RS06755 5866abf6482bbaeb07695409d78001b1 554 SUPERFAMILY SSF63829 20 314 1.57E-13 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.170.130.10 119 226 1.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.60.40.1120 25 93 1.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 199 229 1.8E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532:SF57 538 1030 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532:SF57 7 384 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532:SF57 401 445 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Pfam PF13715 CarboxypepD_reg-like domain 25 107 9.1E-17 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.40.170.20 227 251 5.4E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.40.170.20 840 1029 5.4E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.40.170.20 339 403 5.4E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Gene3D G3DSA:2.40.170.20 447 806 5.4E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 223 3.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1031 1.9E-237 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532 538 1030 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532 7 384 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 PANTHER PTHR11532 401 445 3.7E-211 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF56935 104 247 6.87E-82 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF56935 946 1029 6.87E-82 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF56935 863 907 6.87E-82 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF56935 330 418 6.87E-82 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF56935 467 806 6.87E-82 T 23-04-2016 NIAKO_RS15740 b4b5d06d3577ee7aff27dda9841487f1 1032 SUPERFAMILY SSF49464 25 106 2.22E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 Pfam PF08544 GHMP kinases C terminal 240 319 5.7E-8 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 Gene3D G3DSA:3.30.70.890 194 333 4.4E-16 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 Gene3D G3DSA:3.30.230.10 3 177 2.6E-31 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 Pfam PF00288 GHMP kinases N terminal domain 105 167 7.3E-11 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 SUPERFAMILY SSF54211 2 181 1.44E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PRINTS PR00960 LmbP protein signature 283 302 2.9E-38 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PRINTS PR00960 LmbP protein signature 147 166 2.9E-38 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PRINTS PR00960 LmbP protein signature 255 279 2.9E-38 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PRINTS PR00960 LmbP protein signature 7 22 2.9E-38 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PRINTS PR00960 LmbP protein signature 105 126 2.9E-38 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PIRSF PIRSF036406 1 339 8.1E-127 T 23-04-2016 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 SUPERFAMILY SSF55060 186 329 4.93E-27 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS12560 5dde3075354f53b0ad2f1b85777c9175 339 PANTHER PTHR32463 1 319 4.3E-81 T 23-04-2016 NIAKO_RS00205 428dde953a9ac9469ee0b55d242814e7 118 Gene3D G3DSA:2.60.120.10 15 104 7.9E-4 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS00205 428dde953a9ac9469ee0b55d242814e7 118 SUPERFAMILY SSF51182 23 99 1.19E-8 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS10295 5bc90d8e0f2c7fb62c9a8c9bf0ea5ded 185 Gene3D G3DSA:3.90.79.10 5 179 3.0E-48 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS10295 5bc90d8e0f2c7fb62c9a8c9bf0ea5ded 185 SUPERFAMILY SSF55811 5 179 7.99E-43 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS10295 5bc90d8e0f2c7fb62c9a8c9bf0ea5ded 185 Pfam PF00293 NUDIX domain 47 159 3.5E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS10295 5bc90d8e0f2c7fb62c9a8c9bf0ea5ded 185 PANTHER PTHR11839 5 180 3.1E-35 T 23-04-2016 NIAKO_RS10295 5bc90d8e0f2c7fb62c9a8c9bf0ea5ded 185 PANTHER PTHR11839:SF9 5 180 3.1E-35 T 23-04-2016 NIAKO_RS11495 4859f20aef2d337e802cfe1e57cc35de 389 SUPERFAMILY SSF53448 46 243 3.94E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS11495 4859f20aef2d337e802cfe1e57cc35de 389 PANTHER PTHR31646:SF1 42 283 1.5E-73 T 23-04-2016 NIAKO_RS11495 4859f20aef2d337e802cfe1e57cc35de 389 PANTHER PTHR31646 42 283 1.5E-73 T 23-04-2016 NIAKO_RS11495 4859f20aef2d337e802cfe1e57cc35de 389 Pfam PF11051 Mannosyltransferase putative 185 253 1.3E-10 T 23-04-2016 IPR022751 Alpha-mannosyltransferase GO:0006486|GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.-|UniPathway: UPA00378 NIAKO_RS11495 4859f20aef2d337e802cfe1e57cc35de 389 Pfam PF11051 Mannosyltransferase putative 45 171 2.8E-29 T 23-04-2016 IPR022751 Alpha-mannosyltransferase GO:0006486|GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.-|UniPathway: UPA00378 NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273:SF2 110 152 7.2E-46 T 23-04-2016 NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273:SF2 1 89 7.2E-46 T 23-04-2016 NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273:SF2 204 412 7.2E-46 T 23-04-2016 NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 Pfam PF04773 FecR protein 203 295 2.1E-11 T 23-04-2016 IPR006860 FecR protein NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 Pfam PF16344 Domain of unknown function (DUF4974) 306 404 2.5E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273 110 152 7.2E-46 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273 1 89 7.2E-46 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS07150 f3327b5963c4214b6649e56d74029bf9 412 PANTHER PTHR30273 204 412 7.2E-46 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 PANTHER PTHR26402:SF151 2 200 3.0E-39 T 23-04-2016 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 PANTHER PTHR26402 2 200 3.0E-39 T 23-04-2016 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 SUPERFAMILY SSF46894 136 202 1.7E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 SUPERFAMILY SSF52172 1 129 7.68E-21 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.56E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.56E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.56E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 Gene3D G3DSA:1.10.10.10 152 203 4.7E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 Pfam PF00072 Response regulator receiver domain 5 112 2.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 SMART SM00448 2 115 1.1E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.3E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 Gene3D G3DSA:3.40.50.2300 2 151 5.9E-22 T 23-04-2016 NIAKO_RS15920 cbad24ec89a1af8cb9c8faf4c1f8d5fe 208 SMART SM00421 146 203 2.9E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 Pfam PF00005 ABC transporter 22 159 2.2E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 PANTHER PTHR24220 7 219 1.3E-97 T 23-04-2016 NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 SUPERFAMILY SSF52540 3 221 5.22E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 SMART SM00382 30 216 1.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 Gene3D G3DSA:3.40.50.300 2 221 9.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS10305 0e8cc1c070fbe31ba84b565e5b746bc2 254 PANTHER PTHR24220:SF414 7 219 1.3E-97 T 23-04-2016 NIAKO_RS33085 4f8a843b75a4776177375fb8529f0a39 204 Pfam PF13563 2'-5' RNA ligase superfamily 67 178 1.5E-6 T 23-04-2016 NIAKO_RS33085 4f8a843b75a4776177375fb8529f0a39 204 SUPERFAMILY SSF55144 52 192 1.26E-8 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS33085 4f8a843b75a4776177375fb8529f0a39 204 Gene3D G3DSA:3.90.1140.10 71 143 2.5E-4 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 SUPERFAMILY SSF55174 7 58 1.85E-10 T 23-04-2016 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 PANTHER PTHR21600:SF24 7 245 4.4E-119 T 23-04-2016 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 SUPERFAMILY SSF55120 66 227 1.01E-39 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 Pfam PF01479 S4 domain 7 50 1.9E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 PANTHER PTHR21600 7 245 4.4E-119 T 23-04-2016 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 4.8E-46 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 SMART SM00363 5 71 1.2E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 Gene3D G3DSA:3.10.290.10 7 62 1.0E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS10015 38734fd68fd0544e2803018108310a0b 360 Pfam PF00849 RNA pseudouridylate synthase 67 192 6.2E-14 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS14780 2bd02ece92ab99b459ef19a6d2844629 164 Pfam PF13673 Acetyltransferase (GNAT) domain 43 147 3.7E-20 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS14780 2bd02ece92ab99b459ef19a6d2844629 164 PANTHER PTHR23091 1 155 8.0E-27 T 23-04-2016 NIAKO_RS14780 2bd02ece92ab99b459ef19a6d2844629 164 Gene3D G3DSA:3.40.630.30 1 162 4.6E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS14780 2bd02ece92ab99b459ef19a6d2844629 164 SUPERFAMILY SSF55729 1 153 5.49E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 Gene3D G3DSA:3.20.20.10 31 260 5.0E-64 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 Gene3D G3DSA:2.40.37.10 261 401 8.0E-46 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PANTHER PTHR11482:SF5 10 404 1.1E-127 T 23-04-2016 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 49 67 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 SUPERFAMILY SSF51419 18 272 3.05E-61 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 4.2E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 260 279 4.2E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 49 67 4.2E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 371 4.2E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 69 81 4.2E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01181 Diaminopimelate decarboxylase signature 368 390 5.8E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01181 Diaminopimelate decarboxylase signature 152 161 5.8E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01181 Diaminopimelate decarboxylase signature 67 84 5.8E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PRINTS PR01181 Diaminopimelate decarboxylase signature 288 306 5.8E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 378 8.9E-14 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 SUPERFAMILY SSF50621 246 401 7.33E-49 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 400 1.9E-115 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 7 401 35.153 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 PANTHER PTHR11482 10 404 1.1E-127 T 23-04-2016 NIAKO_RS25905 6ca69f9a96899fe4657bbf44ee216fbc 404 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 27 270 1.3E-43 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 PANTHER PTHR34220 713 963 9.5E-40 T 23-04-2016 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 SUPERFAMILY SSF55874 813 964 3.59E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Pfam PF07495 Y_Y_Y domain 646 692 3.3E-10 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 SUPERFAMILY SSF63829 345 388 3.6E-5 T 23-04-2016 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 SUPERFAMILY SSF63829 426 548 3.6E-5 T 23-04-2016 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Pfam PF07494 Two component regulator propeller 33 55 0.0029 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Pfam PF06580 Histidine kinase 762 835 9.5E-20 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 SUPERFAMILY SSF63829 37 189 1.96E-8 T 23-04-2016 NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Gene3D G3DSA:2.120.10.30 346 388 2.3E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Gene3D G3DSA:2.120.10.30 462 561 2.3E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Gene3D G3DSA:2.120.10.30 283 305 2.3E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Gene3D G3DSA:2.120.10.30 111 163 2.3E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14810 1945cbea914ec8c9adfe281e7b0b3d8b 966 Gene3D G3DSA:3.30.565.10 811 965 5.0E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 Gene3D G3DSA:1.10.10.10 3 106 1.2E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 SUPERFAMILY SSF46785 2 96 7.26E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 PANTHER PTHR33154:SF6 1 96 5.0E-18 T 23-04-2016 NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 SMART SM00418 6 84 1.5E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 Pfam PF12840 Helix-turn-helix domain 6 64 3.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 PANTHER PTHR33154 1 96 5.0E-18 T 23-04-2016 NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.8E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.8E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS17080 afe9a9a8cd3b29cd97b12a2bb5daf690 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 7.8E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 210 240 4.2E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 234 6.4E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Gene3D G3DSA:2.40.170.20 235 262 1.4E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Gene3D G3DSA:2.40.170.20 937 1101 1.4E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Gene3D G3DSA:2.40.170.20 377 857 1.4E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532:SF57 17 305 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532:SF57 527 847 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532:SF57 864 1099 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532:SF57 358 422 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532 17 305 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532 527 847 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532 864 1099 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 PANTHER PTHR11532 358 422 2.6E-174 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF56935 928 972 1.33E-68 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF56935 114 258 1.33E-68 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF56935 368 456 1.33E-68 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF56935 1010 1101 1.33E-68 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF56935 490 837 1.33E-68 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Pfam PF13715 CarboxypepD_reg-like domain 39 118 3.9E-15 T 23-04-2016 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Gene3D G3DSA:2.60.40.1120 38 121 1.9E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 Gene3D G3DSA:2.170.130.10 122 234 6.1E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 36 1101 4.3E-201 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS14165 64f6823801753163e1675fc1a82bb163 1101 SUPERFAMILY SSF49464 36 116 1.44E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08815 48da21a25989cee0ffb74b7280e353c5 307 PANTHER PTHR16222 15 300 3.0E-30 T 23-04-2016 NIAKO_RS08815 48da21a25989cee0ffb74b7280e353c5 307 SUPERFAMILY SSF101478 13 298 1.7E-42 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS08815 48da21a25989cee0ffb74b7280e353c5 307 PANTHER PTHR16222:SF12 15 300 3.0E-30 T 23-04-2016 NIAKO_RS08815 48da21a25989cee0ffb74b7280e353c5 307 Pfam PF03747 ADP-ribosylglycohydrolase 16 289 1.8E-41 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS23150 6a6c60e85d86e5d8078e11ee30dfa916 306 SUPERFAMILY SSF53756 19 249 1.26E-8 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 SMART SM00939 361 627 5.1E-62 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Gene3D G3DSA:3.40.50.1820 2 194 7.4E-83 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Gene3D G3DSA:3.40.50.1820 274 389 7.4E-83 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 40 632 9.8E-82 T 23-04-2016 IPR005674 CocE/Serine esterase GO:0016787 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731 29 203 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731 351 383 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731 268 335 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Gene3D G3DSA:2.60.120.260 390 630 1.0E-79 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 43 333 2.9E-52 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731:SF151 29 203 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731:SF151 351 383 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 PANTHER PTHR11731:SF151 268 335 6.5E-32 T 23-04-2016 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 SUPERFAMILY SSF53474 25 396 9.46E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 383 625 1.2E-29 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 SUPERFAMILY SSF49785 393 631 4.25E-56 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS19420 109c1230951f203a662f9da32c4ebef9 632 Gene3D G3DSA:1.10.3020.10 195 273 2.4E-20 T 23-04-2016 NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 Gene3D G3DSA:3.10.310.10 153 317 2.9E-66 T 23-04-2016 NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 Gene3D G3DSA:3.10.310.10 1 152 1.2E-63 T 23-04-2016 NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 Pfam PF05544 Proline racemase 7 331 4.8E-128 T 23-04-2016 IPR008794 Proline racemase family NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 PANTHER PTHR33442 1 333 7.2E-123 T 23-04-2016 NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 PIRSF PIRSF029792 1 333 1.6E-125 T 23-04-2016 IPR008794 Proline racemase family NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 SUPERFAMILY SSF54506 2 330 1.35E-110 T 23-04-2016 NIAKO_RS12690 97fffa61e1bca6a2d81cca7d67c01e75 333 PANTHER PTHR33442:SF2 1 333 7.2E-123 T 23-04-2016 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 Gene3D G3DSA:1.10.10.60 67 113 9.0E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 2.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 2.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 PANTHER PTHR11019 13 116 8.9E-21 T 23-04-2016 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 SUPERFAMILY SSF46689 66 114 7.62E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 Gene3D G3DSA:1.10.10.60 16 66 4.4E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 SUPERFAMILY SSF46689 17 63 4.51E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 SMART SM00342 30 112 1.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14925 c81861df4e03934ebb44272b2fc58fa2 116 Pfam PF12833 Helix-turn-helix domain 36 112 9.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS04965 8de58798cda28159fa1245a566b6d03d 146 Gene3D G3DSA:2.60.40.360 42 138 7.2E-22 T 23-04-2016 IPR008962 PapD-like NIAKO_RS04965 8de58798cda28159fa1245a566b6d03d 146 PANTHER PTHR37833:SF1 39 125 1.5E-16 T 23-04-2016 NIAKO_RS04965 8de58798cda28159fa1245a566b6d03d 146 PANTHER PTHR37833 39 125 1.5E-16 T 23-04-2016 NIAKO_RS04965 8de58798cda28159fa1245a566b6d03d 146 Pfam PF07610 Protein of unknown function (DUF1573) 64 107 2.9E-20 T 23-04-2016 IPR011467 Protein of unknown function DUF1573 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 SUPERFAMILY SSF53822 65 337 2.36E-60 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 SMART SM00354 5 75 8.6E-18 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 Gene3D G3DSA:3.40.50.2300 58 180 3.8E-41 T 23-04-2016 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 PANTHER PTHR30146 6 337 1.2E-93 T 23-04-2016 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 SUPERFAMILY SSF47413 4 63 2.72E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 Gene3D G3DSA:1.10.260.40 6 57 8.6E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 318 2.4E-27 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.3E-11 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS27715 2789cac34e3483dea4b56f809a8a9f6f 337 Gene3D G3DSA:3.40.50.2300 181 315 3.7E-36 T 23-04-2016 NIAKO_RS21420 8d73590d13c6900085c96b5e8a8ad4f6 203 SUPERFAMILY SSF51206 19 143 2.62E-16 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS21420 8d73590d13c6900085c96b5e8a8ad4f6 203 PANTHER PTHR24567:SF33 21 195 2.9E-24 T 23-04-2016 NIAKO_RS21420 8d73590d13c6900085c96b5e8a8ad4f6 203 PANTHER PTHR24567 21 195 2.9E-24 T 23-04-2016 NIAKO_RS21420 8d73590d13c6900085c96b5e8a8ad4f6 203 Gene3D G3DSA:2.60.120.10 11 150 3.5E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 Pfam PF00266 Aminotransferase class-V 72 359 2.7E-33 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 PANTHER PTHR11601:SF40 42 432 9.1E-74 T 23-04-2016 NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 Gene3D G3DSA:3.40.640.10 83 322 1.1E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 PANTHER PTHR11601 42 432 9.1E-74 T 23-04-2016 NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 SUPERFAMILY SSF53383 54 432 1.64E-67 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS24325 fbb4e10c1642c8d2dd785d87fff95f6a 440 Gene3D G3DSA:3.90.1150.10 323 429 2.2E-4 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 SUPERFAMILY SSF49785 47 190 1.63E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 454 635 2.6E-38 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 SMART SM00813 454 635 6.3E-33 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 SUPERFAMILY SSF51445 185 531 2.02E-57 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 PANTHER PTHR31776:SF0 18 649 6.6E-211 T 23-04-2016 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 Pfam PF02018 Carbohydrate binding domain 46 189 9.5E-9 T 23-04-2016 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 SUPERFAMILY SSF51011 538 641 7.55E-7 T 23-04-2016 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 PANTHER PTHR31776 18 649 6.6E-211 T 23-04-2016 NIAKO_RS03940 a4f1a88caacdf98373863ce9b1db72ce 649 Gene3D G3DSA:2.60.120.260 47 202 1.0E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS35975 74bc0bc12808e5f95134f3da8c53f1ca 138 PANTHER PTHR41288 3 136 2.9E-24 T 23-04-2016 NIAKO_RS03870 91f9ad68b953d7a28e3ccbb47dbab644 372 PANTHER PTHR39338 126 368 1.5E-69 T 23-04-2016 NIAKO_RS03870 91f9ad68b953d7a28e3ccbb47dbab644 372 PIRSF PIRSF010256 3 372 8.4E-89 T 23-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 NIAKO_RS03870 91f9ad68b953d7a28e3ccbb47dbab644 372 PANTHER PTHR39338:SF1 126 368 1.5E-69 T 23-04-2016 NIAKO_RS03870 91f9ad68b953d7a28e3ccbb47dbab644 372 SUPERFAMILY SSF53300 203 330 2.89E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS03870 91f9ad68b953d7a28e3ccbb47dbab644 372 Pfam PF05762 VWA domain containing CoxE-like protein 147 365 1.9E-57 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 330 34.982 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 PIRSF PIRSF000148 1 335 3.2E-124 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 316 2.3E-53 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 SMART SM00859 2 117 2.3E-34 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 PANTHER PTHR10174 65 330 6.8E-75 T 23-04-2016 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 Gene3D G3DSA:3.40.50.720 1 138 2.5E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 SUPERFAMILY SSF55347 125 317 1.75E-75 T 23-04-2016 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 116 1.4E-28 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 SUPERFAMILY SSF51735 1 153 1.25E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 PANTHER PTHR10174:SF2 65 330 6.8E-75 T 23-04-2016 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 Gene3D G3DSA:3.30.360.10 139 313 1.3E-79 T 23-04-2016 NIAKO_RS29780 2eefab47b87ec3a9f71e516815cec737 336 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 330 1.3E-133 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NIAKO_RS07525 9a18a1706315a04df8c46178e956592b 294 SUPERFAMILY SSF51569 8 284 1.11E-48 T 23-04-2016 NIAKO_RS07525 9a18a1706315a04df8c46178e956592b 294 PANTHER PTHR10277:SF1 2 281 3.8E-86 T 23-04-2016 NIAKO_RS07525 9a18a1706315a04df8c46178e956592b 294 Pfam PF00682 HMGL-like 17 281 2.5E-26 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NIAKO_RS07525 9a18a1706315a04df8c46178e956592b 294 PANTHER PTHR10277 2 281 3.8E-86 T 23-04-2016 NIAKO_RS07525 9a18a1706315a04df8c46178e956592b 294 Gene3D G3DSA:3.20.20.70 10 282 2.9E-47 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 SMART SM00100 30 149 6.4E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 Gene3D G3DSA:1.10.10.10 167 236 9.2E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 SMART SM00419 180 228 0.0013 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 SUPERFAMILY SSF46785 167 235 3.93E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 SUPERFAMILY SSF51206 46 164 1.31E-26 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 Gene3D G3DSA:2.60.120.10 35 160 1.1E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 Pfam PF00027 Cyclic nucleotide-binding domain 51 137 1.3E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 PANTHER PTHR24567 51 233 4.5E-32 T 23-04-2016 NIAKO_RS02405 f1ca0b9cdb51d98172b89b7c43cf1b7b 237 Pfam PF13545 Crp-like helix-turn-helix domain 170 233 1.3E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS34825 d6a9661726a3fe35efd1dfcc2f00350f 461 Pfam PF00361 Proton-conducting membrane transporter 117 398 3.8E-68 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS34825 d6a9661726a3fe35efd1dfcc2f00350f 461 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 1 452 16.483 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34825 d6a9661726a3fe35efd1dfcc2f00350f 461 PANTHER PTHR22773:SF41 4 453 3.3E-138 T 23-04-2016 NIAKO_RS34825 d6a9661726a3fe35efd1dfcc2f00350f 461 PANTHER PTHR22773 4 453 3.3E-138 T 23-04-2016 NIAKO_RS34825 d6a9661726a3fe35efd1dfcc2f00350f 461 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 452 1.2E-113 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Gene3D G3DSA:1.10.1740.10 307 388 2.0E-26 T 23-04-2016 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 SUPERFAMILY SSF51735 8 154 1.72E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 PANTHER PTHR30525 8 389 1.7E-199 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 383 1.7E-135 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 SUPERFAMILY SSF69055 297 387 1.2E-28 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 5.3E-37 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 SUPERFAMILY SSF55347 130 268 1.9E-57 T 23-04-2016 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 10 386 45.158 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 233 1.8E-38 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 10 136 4.0E-42 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 PIRSF PIRSF006205 7 389 3.4E-151 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS02845 309eef407cbed3876cfde322dc6df548 389 Gene3D G3DSA:3.40.50.720 7 154 1.4E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12315 05f730867486aca3685cc4f961ea5ced 108 Gene3D G3DSA:1.10.1740.10 4 94 2.6E-22 T 23-04-2016 NIAKO_RS12315 05f730867486aca3685cc4f961ea5ced 108 PANTHER PTHR30173:SF20 3 103 2.3E-22 T 23-04-2016 NIAKO_RS12315 05f730867486aca3685cc4f961ea5ced 108 SUPERFAMILY SSF88946 4 96 1.96E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS12315 05f730867486aca3685cc4f961ea5ced 108 PANTHER PTHR30173 3 103 2.3E-22 T 23-04-2016 NIAKO_RS12315 05f730867486aca3685cc4f961ea5ced 108 Pfam PF04542 Sigma-70 region 2 23 89 9.8E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01095 422be8559393cbdfd08b6dd7fbbf4b84 103 SUPERFAMILY SSF117916 4 101 1.83E-29 T 23-04-2016 NIAKO_RS01095 422be8559393cbdfd08b6dd7fbbf4b84 103 Pfam PF01883 Domain of unknown function DUF59 7 81 1.3E-18 T 23-04-2016 IPR002744 Domain of unknown function DUF59 NIAKO_RS01095 422be8559393cbdfd08b6dd7fbbf4b84 103 PANTHER PTHR13696:SF62 3 100 2.4E-20 T 23-04-2016 NIAKO_RS01095 422be8559393cbdfd08b6dd7fbbf4b84 103 PANTHER PTHR13696 3 100 2.4E-20 T 23-04-2016 NIAKO_RS02270 74fa834d6396f17505994dcc712cf0f6 198 Pfam PF14065 Protein of unknown function (DUF4255) 9 181 1.3E-32 T 23-04-2016 IPR025351 Protein of unknown function DUF4255 NIAKO_RS14700 12943f51a909bce1dbb1a748d6a70f81 151 Gene3D G3DSA:3.30.530.20 4 147 4.0E-21 T 23-04-2016 IPR023393 START-like domain NIAKO_RS14700 12943f51a909bce1dbb1a748d6a70f81 151 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 145 3.2E-13 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS14700 12943f51a909bce1dbb1a748d6a70f81 151 SUPERFAMILY SSF55961 8 147 1.6E-18 T 23-04-2016 NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 PANTHER PTHR23024 49 128 5.9E-21 T 23-04-2016 NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 SUPERFAMILY SSF53474 29 171 2.27E-23 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 PANTHER PTHR23024:SF24 49 128 5.9E-21 T 23-04-2016 NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 Gene3D G3DSA:3.40.50.1820 25 128 1.5E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 Pfam PF07859 alpha/beta hydrolase fold 50 130 7.7E-24 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS36930 f2382f770054c1b3406430b01b818ab8 177 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 50 66 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 NIAKO_RS28070 1a91b205a4b56e6eb18a52b84902da5c 214 PANTHER PTHR38477 54 213 3.4E-25 T 23-04-2016 NIAKO_RS28070 1a91b205a4b56e6eb18a52b84902da5c 214 PANTHER PTHR38477:SF1 54 213 3.4E-25 T 23-04-2016 NIAKO_RS28070 1a91b205a4b56e6eb18a52b84902da5c 214 Pfam PF13645 L,D-transpeptidase catalytic domain 51 201 7.8E-37 T 23-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SUPERFAMILY SSF52540 174 451 3.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PANTHER PTHR11638:SF18 1 817 1.1E-253 T 23-04-2016 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 730 803 2.8E-18 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Gene3D G3DSA:1.10.8.60 352 434 4.7E-20 T 23-04-2016 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SUPERFAMILY SSF52540 510 801 5.53E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SUPERFAMILY SSF81923 13 143 2.75E-12 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Gene3D G3DSA:3.40.50.300 170 349 2.5E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SMART SM01086 729 819 1.0E-19 T 23-04-2016 IPR019489 Clp ATPase, C-terminal NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Gene3D G3DSA:3.40.50.300 514 738 9.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 56 6.1E-5 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Gene3D G3DSA:1.10.8.60 739 814 8.8E-20 T 23-04-2016 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 3.8E-35 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 610 628 3.8E-35 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 672 686 3.8E-35 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 639 657 3.8E-35 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Gene3D G3DSA:1.10.1780.10 11 143 6.3E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SMART SM00382 208 346 3.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 SMART SM00382 561 722 7.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 PANTHER PTHR11638 1 817 1.1E-253 T 23-04-2016 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Pfam PF07724 AAA domain (Cdc48 subfamily) 561 723 6.4E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS12825 fe1492add63387b20c905c3f6ebfbdf0 828 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 342 2.5E-11 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS20870 f51d28c628c096431ccf13cc581dbb1f 195 Gene3D G3DSA:2.40.128.110 71 190 5.0E-17 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS20870 f51d28c628c096431ccf13cc581dbb1f 195 SMART SM00867 34 193 0.0039 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS20870 f51d28c628c096431ccf13cc581dbb1f 195 SUPERFAMILY SSF101874 68 192 2.35E-17 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS20870 f51d28c628c096431ccf13cc581dbb1f 195 Pfam PF04264 YceI-like domain 63 190 1.8E-15 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 Pfam PF00580 UvrD/REP helicase N-terminal domain 199 277 6.4E-13 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 88 2.3E-7 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 Gene3D G3DSA:3.40.50.300 211 284 3.4E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 Gene3D G3DSA:3.40.50.300 23 126 3.4E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 SUPERFAMILY SSF52540 186 342 4.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 SUPERFAMILY SSF52540 25 158 4.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 SUPERFAMILY SSF52540 550 631 4.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 SUPERFAMILY SSF52540 371 517 4.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08680 8ca4edd6b096f1395f515565f0c9b764 649 PANTHER PTHR11070 25 277 5.6E-19 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 Gene3D G3DSA:1.25.40.10 249 316 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 Gene3D G3DSA:1.25.40.10 608 660 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 Gene3D G3DSA:1.25.40.10 356 432 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 Gene3D G3DSA:1.25.40.10 713 778 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 SUPERFAMILY SSF81901 252 429 1.7E-7 T 23-04-2016 NIAKO_RS01840 42c4ba9a35fd292aaf7e71ebb4851a4d 1061 Pfam PF13432 Tetratricopeptide repeat 619 675 0.0067 T 23-04-2016 NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 SUPERFAMILY SSF51735 1 160 5.1E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 Gene3D G3DSA:3.40.50.720 1 160 1.0E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16050 0f36b62f186d99475303a02372ad2a96 198 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 159 9.2E-14 T 23-04-2016 NIAKO_RS24975 1c6261f27615c3c0e631bed85afe68b8 149 PANTHER PTHR10545 1 147 6.7E-49 T 23-04-2016 NIAKO_RS24975 1c6261f27615c3c0e631bed85afe68b8 149 SUPERFAMILY SSF55729 3 141 2.1E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24975 1c6261f27615c3c0e631bed85afe68b8 149 Gene3D G3DSA:3.40.630.30 1 146 2.5E-49 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24975 1c6261f27615c3c0e631bed85afe68b8 149 Pfam PF00583 Acetyltransferase (GNAT) family 56 134 1.4E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS29770 f62291ac907ceb5cf6a844c3919bc2bf 187 Pfam PF13392 HNH endonuclease 70 112 4.8E-6 T 23-04-2016 IPR003615 HNH nuclease NIAKO_RS29770 f62291ac907ceb5cf6a844c3919bc2bf 187 Pfam PF07463 NUMOD4 motif 8 60 8.5E-12 T 23-04-2016 IPR010902 NUMOD4 GO:0016788 NIAKO_RS29770 f62291ac907ceb5cf6a844c3919bc2bf 187 Gene3D G3DSA:1.10.10.10 144 176 1.1E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29770 f62291ac907ceb5cf6a844c3919bc2bf 187 SUPERFAMILY SSF54060 20 117 1.09E-15 T 23-04-2016 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 Pfam PF14322 Starch-binding associating with outer membrane 54 224 5.0E-16 T 23-04-2016 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 SUPERFAMILY SSF48452 360 420 9.23E-73 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 SUPERFAMILY SSF48452 459 658 9.23E-73 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 SUPERFAMILY SSF48452 22 326 9.23E-73 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 Pfam PF07980 SusD family 314 658 4.9E-39 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 Gene3D G3DSA:1.25.40.10 207 335 7.8E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15455 3d68d8617a6bb72928ee45fe5c9efb5f 659 Gene3D G3DSA:1.25.40.10 472 583 7.8E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 PANTHER PTHR30328:SF7 3 187 1.1E-29 T 23-04-2016 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.1E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 PANTHER PTHR30328 3 187 1.1E-29 T 23-04-2016 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 SUPERFAMILY SSF48498 80 189 5.84E-19 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 Gene3D G3DSA:1.10.357.10 3 184 3.3E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 SUPERFAMILY SSF46689 3 80 7.7E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 8.1E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS01380 9d4f8e786c0e6e0515460b7ccc1cdd16 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 8.1E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 SUPERFAMILY SSF88659 121 177 7.41E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 Pfam PF04542 Sigma-70 region 2 24 87 4.8E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 180 4.4E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 PANTHER PTHR30173 2 188 3.2E-43 T 23-04-2016 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 18 179 1.6E-41 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 Gene3D G3DSA:1.10.1740.10 4 88 5.2E-17 T 23-04-2016 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 Pfam PF08281 Sigma-70, region 4 127 176 6.0E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 Gene3D G3DSA:1.10.10.10 121 180 1.8E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 PANTHER PTHR30173:SF20 2 188 3.2E-43 T 23-04-2016 NIAKO_RS36910 e714819e2fa8ceb14072af4be872df59 188 SUPERFAMILY SSF88946 4 88 2.75E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS27020 3ce8ca3f5b0b2cbc8d4ab5948b9cd207 348 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 8 329 6.4E-40 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS27020 3ce8ca3f5b0b2cbc8d4ab5948b9cd207 348 Pfam PF11751 Protein of unknown function (DUF3308) 24 329 5.7E-32 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 SUPERFAMILY SSF51735 434 703 7.04E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 452 701 5.6E-43 T 23-04-2016 NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 SMART SM01007 31 233 5.7E-38 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PANTHER PTHR24322 597 628 1.9E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PANTHER PTHR24322 450 581 1.9E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 Gene3D G3DSA:3.40.225.10 30 233 1.2E-37 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 232 3.1E-24 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 30 707 4.4E-290 T 23-04-2016 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 Gene3D G3DSA:3.40.50.720 423 701 3.3E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 SUPERFAMILY SSF53639 29 233 2.94E-31 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 523 534 7.6E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 571 587 7.6E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 597 616 7.6E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 618 635 7.6E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18000 7342b9be54e1b8562d13d64d0de13b54 707 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 447 464 7.6E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS06640 ff5c71ed2f66dae21b3e80762ba47a58 583 Pfam PF14322 Starch-binding associating with outer membrane 104 231 1.4E-20 T 23-04-2016 NIAKO_RS06640 ff5c71ed2f66dae21b3e80762ba47a58 583 Pfam PF07980 SusD family 326 583 7.0E-45 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06640 ff5c71ed2f66dae21b3e80762ba47a58 583 Gene3D G3DSA:1.25.40.10 419 511 6.8E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06640 ff5c71ed2f66dae21b3e80762ba47a58 583 Gene3D G3DSA:1.25.40.10 211 344 6.8E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06640 ff5c71ed2f66dae21b3e80762ba47a58 583 SUPERFAMILY SSF48452 19 583 5.69E-114 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21910 5ce0e77721e1d46bb963674dff8adf7e 368 PANTHER PTHR30294 1 366 6.3E-100 T 23-04-2016 NIAKO_RS21910 5ce0e77721e1d46bb963674dff8adf7e 368 PANTHER PTHR30294:SF12 1 366 6.3E-100 T 23-04-2016 NIAKO_RS21910 5ce0e77721e1d46bb963674dff8adf7e 368 Pfam PF12698 ABC-2 family transporter protein 19 360 4.6E-50 T 23-04-2016 NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 SUPERFAMILY SSF53067 7 286 1.13E-28 T 23-04-2016 NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 Gene3D G3DSA:3.30.420.40 6 145 8.8E-22 T 23-04-2016 NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 Pfam PF00480 ROK family 8 159 2.7E-11 T 23-04-2016 IPR000600 ROK family NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 PANTHER PTHR18964 8 281 3.3E-12 T 23-04-2016 NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 PANTHER PTHR18964:SF121 8 281 3.3E-12 T 23-04-2016 NIAKO_RS02625 86e1dd0c3b5fd36158788cae4a192ebb 292 Gene3D G3DSA:3.30.420.40 146 262 2.2E-7 T 23-04-2016 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 SMART SM01217 634 703 1.2E-22 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 Gene3D G3DSA:3.40.50.1700 356 600 7.3E-64 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 Gene3D G3DSA:3.20.20.300 23 342 8.7E-108 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 369 597 3.9E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 PANTHER PTHR30620 16 717 4.4E-281 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 PANTHER PTHR30620:SF8 16 717 4.4E-281 T 23-04-2016 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 53 328 1.5E-53 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 SUPERFAMILY SSF51445 23 368 2.42E-97 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 85 104 7.3E-11 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 250 268 7.3E-11 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 7.3E-11 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 Pfam PF14310 Fibronectin type III-like domain 634 703 1.6E-18 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS35800 a5fa05c263caf5f91c74bf057915a3dc 718 SUPERFAMILY SSF52279 369 600 1.44E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS11215 ddf83f5a4fb3d16fc27ddb7813931c0c 144 SUPERFAMILY SSF49764 12 143 7.48E-38 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS11215 ddf83f5a4fb3d16fc27ddb7813931c0c 144 Gene3D G3DSA:2.60.40.790 16 143 2.0E-37 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS11215 ddf83f5a4fb3d16fc27ddb7813931c0c 144 PANTHER PTHR11527:SF122 13 144 4.8E-33 T 23-04-2016 NIAKO_RS11215 ddf83f5a4fb3d16fc27ddb7813931c0c 144 Pfam PF00011 Hsp20/alpha crystallin family 42 144 1.5E-27 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS11215 ddf83f5a4fb3d16fc27ddb7813931c0c 144 PANTHER PTHR11527 13 144 4.8E-33 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 PANTHER PTHR20836 1 238 8.4E-51 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 PIRSF PIRSF000161 1 238 1.3E-57 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 33 237 2.2E-41 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 Gene3D G3DSA:3.30.360.10 110 207 7.1E-25 T 23-04-2016 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 106 236 1.5E-37 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 103 1.6E-13 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 Gene3D G3DSA:3.40.50.720 1 109 1.4E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 SUPERFAMILY SSF55347 105 209 5.23E-21 T 23-04-2016 NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 SUPERFAMILY SSF51735 1 102 5.52E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05615 da827a58cf28c09c9e5dc26dbd3aa843 238 SUPERFAMILY SSF51735 208 238 5.52E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 27.354 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 219 1.6E-59 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 PANTHER PTHR32125 4 224 5.6E-63 T 23-04-2016 NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 220 2.5E-50 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 Gene3D G3DSA:3.90.550.10 1 222 2.0E-62 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 SUPERFAMILY SSF53448 3 220 4.38E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS23220 e9f00b6bd98a90f7865c9e61904aad50 225 PANTHER PTHR32125:SF4 4 224 5.6E-63 T 23-04-2016 NIAKO_RS21540 14bfe295fabe397b2edccfc72b3c73e6 610 Pfam PF00474 Sodium:solute symporter family 36 475 7.1E-21 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS21540 14bfe295fabe397b2edccfc72b3c73e6 610 PANTHER PTHR11819 175 559 7.9E-38 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS21540 14bfe295fabe397b2edccfc72b3c73e6 610 PANTHER PTHR11819 4 159 7.9E-38 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS21540 14bfe295fabe397b2edccfc72b3c73e6 610 PANTHER PTHR11819 604 609 7.9E-38 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 SUPERFAMILY SSF63737 36 230 1.7E-33 T 23-04-2016 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 SUPERFAMILY SSF48371 583 717 2.92E-10 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PANTHER PTHR11533:SF163 67 536 1.5E-84 T 23-04-2016 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PANTHER PTHR11533:SF163 757 801 1.5E-84 T 23-04-2016 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 Pfam PF01433 Peptidase family M1 37 410 8.3E-57 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 Gene3D G3DSA:1.25.10.10 588 702 5.4E-9 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 341 353 1.7E-5 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 322 337 1.7E-5 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 165 180 1.7E-5 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PANTHER PTHR11533 67 536 1.5E-84 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 PANTHER PTHR11533 757 801 1.5E-84 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 Gene3D G3DSA:1.10.390.10 336 478 4.6E-30 T 23-04-2016 NIAKO_RS11620 64c1ed9cf393ee8e5b2a025366821bd2 812 SUPERFAMILY SSF55486 237 477 8.67E-57 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 PANTHER PTHR11373:SF29 159 461 3.1E-62 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 PANTHER PTHR11373:SF29 1 140 3.1E-62 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Pfam PF01966 HD domain 63 175 2.9E-9 T 23-04-2016 IPR006674 HD domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Pfam PF13286 Phosphohydrolase-associated domain 353 450 5.8E-8 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Gene3D G3DSA:1.10.3410.10 259 370 1.9E-33 T 23-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Gene3D G3DSA:1.10.3210.10 1 120 8.9E-61 T 23-04-2016 IPR006674 HD domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Gene3D G3DSA:1.10.3210.10 160 258 8.9E-61 T 23-04-2016 IPR006674 HD domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 SUPERFAMILY SSF109604 159 198 2.62E-61 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 SUPERFAMILY SSF109604 25 132 2.62E-61 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 SUPERFAMILY SSF109604 238 453 2.62E-61 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 PANTHER PTHR11373 159 461 3.1E-62 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 PANTHER PTHR11373 1 140 3.1E-62 T 23-04-2016 NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 SMART SM00471 59 269 1.6E-7 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Gene3D G3DSA:1.10.3550.10 121 157 4.3E-36 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 Gene3D G3DSA:1.10.3550.10 371 457 4.3E-36 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain NIAKO_RS31970 407cc7a262559de29b37c4ca66c41b36 461 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 453 1.1E-103 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 Gene3D G3DSA:2.40.170.20 785 847 8.7E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 Gene3D G3DSA:2.40.170.20 309 753 8.7E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 PANTHER PTHR30069 76 373 4.3E-17 T 23-04-2016 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 SUPERFAMILY SSF49464 116 194 1.22E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 SUPERFAMILY SSF56935 197 860 8.79E-54 T 23-04-2016 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 Gene3D G3DSA:2.60.40.1120 118 191 8.8E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 PANTHER PTHR30069:SF1 76 373 4.3E-17 T 23-04-2016 NIAKO_RS19490 2bf8666fec0b52a88879ef7458c73181 860 Pfam PF13715 CarboxypepD_reg-like domain 119 201 6.1E-14 T 23-04-2016 NIAKO_RS06285 0901d9170f474d0a4409050889cc7391 533 Gene3D G3DSA:1.25.40.10 81 160 3.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 Gene3D G3DSA:3.90.550.10 425 649 4.1E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 Gene3D G3DSA:3.40.50.2000 211 375 7.6E-15 T 23-04-2016 NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 SUPERFAMILY SSF53756 5 401 8.07E-49 T 23-04-2016 NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 SUPERFAMILY SSF53448 425 646 6.03E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 Pfam PF00535 Glycosyl transferase family 2 427 555 4.9E-31 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 Pfam PF13439 Glycosyltransferase Family 4 16 197 7.1E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 Pfam PF00534 Glycosyl transferases group 1 208 374 1.8E-19 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS27395 423a3857dec135d34eca24748f9d8ad3 712 PANTHER PTHR22916 425 646 1.2E-44 T 23-04-2016 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 SUPERFAMILY SSF51395 15 239 2.82E-36 T 23-04-2016 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 22 234 1.0E-54 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 PANTHER PTHR21235 47 244 1.1E-52 T 23-04-2016 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 Pfam PF01884 PcrB family 20 241 1.4E-45 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 1 252 64.501 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 PANTHER PTHR21235:SF22 47 244 1.1E-52 T 23-04-2016 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 Gene3D G3DSA:3.20.20.390 12 240 2.1E-61 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 NIAKO_RS28000 10847c852d1c9fc95328026e8f1f05c1 252 TIGRFAM TIGR01769 GGGP: phosphoglycerol geranylgeranyltransferase 22 227 6.2E-61 T 23-04-2016 IPR010946 Geranylgeranylglyceryl phosphate synthase GO:0000287|GO:0005737|GO:0006650|GO:0047294 KEGG: 00564+2.5.1.41|MetaCyc: PWY-6349|UniPathway: UPA00940 NIAKO_RS12015 d45111324c862842a58f66863fb267a2 604 SUPERFAMILY SSF48452 21 604 1.39E-86 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12015 d45111324c862842a58f66863fb267a2 604 Pfam PF07980 SusD family 341 604 2.9E-37 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS12015 d45111324c862842a58f66863fb267a2 604 Pfam PF14322 Starch-binding associating with outer membrane 109 248 7.1E-19 T 23-04-2016 NIAKO_RS12015 d45111324c862842a58f66863fb267a2 604 Gene3D G3DSA:1.25.40.10 428 527 1.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12015 d45111324c862842a58f66863fb267a2 604 Gene3D G3DSA:1.25.40.10 229 357 1.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PANTHER PTHR24321:SF6 2 248 2.9E-51 T 23-04-2016 NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 Gene3D G3DSA:3.40.50.720 1 247 5.7E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PANTHER PTHR24321 2 248 2.9E-51 T 23-04-2016 NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 8.3E-4 T 23-04-2016 NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 SUPERFAMILY SSF51735 5 247 3.8E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17325 5d6131dfb70140c2a8258ee24c9187a9 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 4.1E-59 T 23-04-2016 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 Gene3D G3DSA:3.40.50.720 139 272 4.1E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 6.6E-40 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.01E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 291 37.57 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 288 8.1E-68 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 SUPERFAMILY SSF53223 1 120 1.63E-39 T 23-04-2016 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 Gene3D G3DSA:3.40.192.10 5 138 5.0E-48 T 23-04-2016 NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 SUPERFAMILY SSF51735 121 287 5.42E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00830 886b348261ca15d57b6091b3292ce281 291 PANTHER PTHR10025 2 287 4.7E-163 T 23-04-2016 NIAKO_RS25420 bf01892047226e924efd851aaf84a9ca 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 286 2.7E-36 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NIAKO_RS25420 bf01892047226e924efd851aaf84a9ca 297 PANTHER PTHR30606 4 289 2.7E-50 T 23-04-2016 NIAKO_RS25420 bf01892047226e924efd851aaf84a9ca 297 PANTHER PTHR30606:SF2 4 289 2.7E-50 T 23-04-2016 NIAKO_RS14710 7fb2534fd57b9ebb921dba61b9132fed 215 PANTHER PTHR30098 1 214 8.1E-68 T 23-04-2016 NIAKO_RS14710 7fb2534fd57b9ebb921dba61b9132fed 215 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 202 4.4E-70 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NIAKO_RS14710 7fb2534fd57b9ebb921dba61b9132fed 215 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 30 213 5.6E-60 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NIAKO_RS14710 7fb2534fd57b9ebb921dba61b9132fed 215 SUPERFAMILY SSF55729 3 213 3.6E-84 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS14710 7fb2534fd57b9ebb921dba61b9132fed 215 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 215 82.601 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NIAKO_RS01915 853d32fd934e9b612baad7db1ba0621e 278 SUPERFAMILY SSF52317 5 233 1.43E-17 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS01915 853d32fd934e9b612baad7db1ba0621e 278 Gene3D G3DSA:3.40.50.880 31 241 2.2E-14 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS23620 0616fcd5b54258375c64a8a7247eab32 288 Gene3D G3DSA:3.40.50.1820 32 255 1.2E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23620 0616fcd5b54258375c64a8a7247eab32 288 SUPERFAMILY SSF53474 32 258 1.04E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23620 0616fcd5b54258375c64a8a7247eab32 288 PANTHER PTHR10992 36 254 7.6E-34 T 23-04-2016 NIAKO_RS23620 0616fcd5b54258375c64a8a7247eab32 288 Pfam PF12697 Alpha/beta hydrolase family 55 254 4.1E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS14230 dbe9d9648fcd5250451128df31399dba 209 SUPERFAMILY SSF53474 5 209 2.68E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS14230 dbe9d9648fcd5250451128df31399dba 209 Pfam PF01738 Dienelactone hydrolase family 18 192 6.6E-5 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NIAKO_RS14230 dbe9d9648fcd5250451128df31399dba 209 Gene3D G3DSA:3.40.50.1820 6 209 7.4E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Gene3D G3DSA:2.60.40.670 657 720 4.5E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SMART SM00089 648 735 2.4E-9 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SMART SM00089 736 824 0.002 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SMART SM00089 565 646 8.3E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SUPERFAMILY SSF49299 729 821 2.88E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Gene3D G3DSA:2.60.40.670 562 646 7.1E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Gene3D G3DSA:2.60.40.670 733 824 1.5E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SUPERFAMILY SSF49299 641 719 7.32E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Pfam PF00801 PKD domain 752 810 1.0E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Pfam PF00801 PKD domain 656 718 9.9E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 Pfam PF13585 C-terminal domain of CHU protein family 1086 1168 9.0E-26 T 23-04-2016 NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1086 1170 3.3E-22 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS25440 fccd4a278992a6791dfe0243e4ad3789 1171 SUPERFAMILY SSF49299 529 645 3.66E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 SUPERFAMILY SSF53774 30 354 7.85E-100 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 Gene3D G3DSA:3.40.50.40 242 352 5.0E-37 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PRINTS PR00139 Asparaginase/glutaminase family signature 110 128 4.2E-25 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PRINTS PR00139 Asparaginase/glutaminase family signature 31 42 4.2E-25 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PRINTS PR00139 Asparaginase/glutaminase family signature 289 307 4.2E-25 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 33 41 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PANTHER PTHR11707 30 352 2.4E-96 T 23-04-2016 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PIRSF PIRSF500176 27 355 4.6E-77 T 23-04-2016 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PIRSF PIRSF001220 25 354 8.2E-90 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 Pfam PF00710 Asparaginase, N-terminal 30 211 2.3E-54 T 23-04-2016 IPR027474 L-asparaginase, N-terminal NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 16 355 2.9E-128 T 23-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 111 121 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 SMART SM00870 30 349 4.7E-135 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 Gene3D G3DSA:3.40.50.1170 26 238 1.5E-63 T 23-04-2016 IPR027474 L-asparaginase, N-terminal NIAKO_RS10470 320869cad90a26b5ecc3f1b3c4b965f4 355 PANTHER PTHR11707:SF29 30 352 2.4E-96 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532:SF57 451 516 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532:SF57 6 418 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532:SF57 599 1069 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532 451 516 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532 6 418 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 PANTHER PTHR11532 599 1069 4.4E-92 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 Gene3D G3DSA:2.170.130.10 103 232 5.7E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 223 1.2E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1071 3.7E-134 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 Pfam PF13715 CarboxypepD_reg-like domain 25 106 5.4E-14 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF49464 24 104 1.02E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 Gene3D G3DSA:2.60.40.1120 24 102 6.0E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 890 935 2.52E-50 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 455 638 2.52E-50 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 670 814 2.52E-50 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 103 247 2.52E-50 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 328 417 2.52E-50 T 23-04-2016 NIAKO_RS06540 11b30098d624142001553baed278c9b1 1071 SUPERFAMILY SSF56935 977 1044 2.52E-50 T 23-04-2016 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 Pfam PF01595 Domain of unknown function DUF21 4 194 1.1E-48 T 23-04-2016 IPR002550 Domain of unknown function DUF21 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 Pfam PF00571 CBS domain 283 330 1.7E-8 T 23-04-2016 IPR000644 CBS domain NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 SMART SM00116 282 330 9.2E-5 T 23-04-2016 IPR000644 CBS domain NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 SUPERFAMILY SSF54631 206 346 2.36E-26 T 23-04-2016 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 PANTHER PTHR22777:SF8 1 423 2.8E-150 T 23-04-2016 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 Gene3D G3DSA:3.30.465.10 325 423 7.6E-24 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 Pfam PF03471 Transporter associated domain 345 423 2.1E-17 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 SUPERFAMILY SSF56176 340 423 7.36E-21 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 PANTHER PTHR22777 1 423 2.8E-150 T 23-04-2016 NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 SMART SM01091 344 424 1.3E-21 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS35130 39dd9cb62aa4cd1a0c67fe9d7379fc1e 424 Gene3D G3DSA:3.10.580.10 197 324 2.0E-16 T 23-04-2016 NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 SUPERFAMILY SSF52540 40 236 1.66E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 Gene3D G3DSA:3.40.50.300 7 237 5.8E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 Pfam PF00005 ABC transporter 45 175 8.5E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 PANTHER PTHR24220 42 243 1.7E-72 T 23-04-2016 NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 PANTHER PTHR24220 8 18 1.7E-72 T 23-04-2016 NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 SMART SM00382 54 225 2.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 PANTHER PTHR24220:SF117 42 243 1.7E-72 T 23-04-2016 NIAKO_RS27405 61b36ee0dac332cedb3bf5b96991f708 244 PANTHER PTHR24220:SF117 8 18 1.7E-72 T 23-04-2016 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 Gene3D G3DSA:3.90.930.12 2 83 5.4E-29 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 SUPERFAMILY SSF56053 1 83 3.6E-23 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 PANTHER PTHR11655:SF14 1 184 4.7E-82 T 23-04-2016 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.0E-24 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 PRINTS PR00059 Ribosomal protein L6 signature 146 167 1.0E-24 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 PIRSF PIRSF002162 1 182 3.5E-48 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 PANTHER PTHR11655 1 184 4.7E-82 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 Pfam PF00347 Ribosomal protein L6 91 169 4.3E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 Pfam PF00347 Ribosomal protein L6 14 83 3.5E-19 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 181 36.376 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 SUPERFAMILY SSF56053 84 181 1.01E-32 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 181 1.6E-70 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 Gene3D G3DSA:3.90.930.12 84 181 1.9E-36 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NIAKO_RS22925 96b6cf4541165034d9c12a6ee2b20339 184 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 159 167 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 Pfam PF12697 Alpha/beta hydrolase family 22 242 3.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 PANTHER PTHR10992 13 250 1.3E-41 T 23-04-2016 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 SUPERFAMILY SSF53474 11 249 1.08E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 2.7E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 194 208 2.7E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 2.7E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS32415 acef8331299e571c57d0b088080fb918 258 Gene3D G3DSA:3.40.50.1820 10 249 3.8E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 SUPERFAMILY SSF49265 438 495 4.54E-7 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 Pfam PF02638 Glycosyl hydrolase-like 10 66 366 7.3E-65 T 23-04-2016 IPR003790 Glycosyl hydrolase-like 10 NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 PANTHER PTHR30032:SF2 265 475 1.6E-80 T 23-04-2016 NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 PANTHER PTHR30032:SF2 32 239 1.6E-80 T 23-04-2016 NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 SUPERFAMILY SSF51445 95 343 3.84E-19 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 Gene3D G3DSA:2.60.40.10 440 487 1.4E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 PANTHER PTHR30032 265 475 1.6E-80 T 23-04-2016 NIAKO_RS03415 566865707009ffa4f1ed4f012022b969 521 PANTHER PTHR30032 32 239 1.6E-80 T 23-04-2016 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 10 148 8.2E-35 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 SUPERFAMILY SSF53163 6 151 4.45E-32 T 23-04-2016 IPR023430 Peptidase HybD-like domain NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PRINTS PR00446 Hydrogen uptake protein signature 59 69 2.3E-14 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PRINTS PR00446 Hydrogen uptake protein signature 38 55 2.3E-14 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PRINTS PR00446 Hydrogen uptake protein signature 19 30 2.3E-14 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PRINTS PR00446 Hydrogen uptake protein signature 7 19 2.3E-14 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PANTHER PTHR30302:SF1 2 164 2.4E-35 T 23-04-2016 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 Pfam PF01750 Hydrogenase maturation protease 24 146 1.2E-20 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 PANTHER PTHR30302 2 164 2.4E-35 T 23-04-2016 NIAKO_RS06195 b88c53c87c8e66ecfc7fca183d3a6861 168 Gene3D G3DSA:3.40.50.1450 6 151 3.2E-37 T 23-04-2016 IPR023430 Peptidase HybD-like domain NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 Gene3D G3DSA:1.10.10.10 3 71 5.3E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 Gene3D G3DSA:1.10.60.10 74 137 2.6E-31 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 SMART SM00529 25 124 8.8E-37 T 23-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 SUPERFAMILY SSF46785 4 62 8.61E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 PANTHER PTHR33238 2 200 3.5E-56 T 23-04-2016 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 5 60 6.9E-16 T 23-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 Pfam PF04023 FeoA domain 145 216 1.4E-6 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 PANTHER PTHR33238:SF1 2 200 3.5E-56 T 23-04-2016 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 SUPERFAMILY SSF47979 64 137 9.81E-27 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS03845 c409f2b4c932eb6c8d339b3cda2b5c9a 218 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 133 2.7E-31 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 Gene3D G3DSA:3.40.50.720 2 252 7.4E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 Pfam PF00106 short chain dehydrogenase 3 188 8.7E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.1E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.1E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.1E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 SUPERFAMILY SSF51735 2 247 1.58E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PANTHER PTHR24322 148 179 1.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07015 58e3a9616dc16942168dd516f3c23698 274 PANTHER PTHR24322 7 132 1.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 SUPERFAMILY SSF51735 2 158 1.14E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 150 6.7E-48 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 Gene3D G3DSA:3.30.360.10 157 311 3.8E-48 T 23-04-2016 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 309 5.5E-42 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 SUPERFAMILY SSF55347 150 310 7.34E-45 T 23-04-2016 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 Gene3D G3DSA:3.40.50.720 1 156 1.5E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PANTHER PTHR10836 1 326 2.1E-125 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 SMART SM00846 2 150 5.7E-65 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PANTHER PTHR10836:SF50 1 326 2.1E-125 T 23-04-2016 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PIRSF PIRSF000149 1 327 1.2E-99 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.9E-17 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 226 243 7.9E-17 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 7.9E-17 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS28670 625a300f3f8a63ec26d3b0c248078dc0 327 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 7.9E-17 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 SUPERFAMILY SSF51445 24 474 3.36E-68 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 SMART SM00642 34 453 7.1E-48 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PRINTS PR00110 Alpha-amylase signature 255 266 8.2E-8 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PRINTS PR00110 Alpha-amylase signature 374 386 8.2E-8 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PRINTS PR00110 Alpha-amylase signature 139 150 8.2E-8 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357:SF11 63 177 3.7E-58 T 23-04-2016 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357:SF11 25 44 3.7E-58 T 23-04-2016 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357:SF11 325 523 3.7E-58 T 23-04-2016 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357:SF11 235 307 3.7E-58 T 23-04-2016 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 Gene3D G3DSA:3.20.20.80 24 461 1.9E-67 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357 63 177 3.7E-58 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357 25 44 3.7E-58 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357 325 523 3.7E-58 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 PANTHER PTHR10357 235 307 3.7E-58 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS20665 ec8d1b52771171f4f9b1da3efe65af08 574 Pfam PF00128 Alpha amylase, catalytic domain 67 429 2.0E-45 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00412 Epoxide hydrolase signature 300 322 1.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00412 Epoxide hydrolase signature 79 97 1.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00412 Epoxide hydrolase signature 142 155 1.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 2.9E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 2.9E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 2.9E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 SUPERFAMILY SSF53474 37 323 2.23E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 Pfam PF00561 alpha/beta hydrolase fold 74 178 2.7E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 Gene3D G3DSA:3.40.50.1820 38 323 5.7E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PANTHER PTHR10992 4 325 1.5E-45 T 23-04-2016 NIAKO_RS15545 e720eee90c23528be9aeb22343083b2d 326 PANTHER PTHR10992:SF778 4 325 1.5E-45 T 23-04-2016 NIAKO_RS29320 cd78b6603ad9b986c21c1fdd29a6f8cb 344 PANTHER PTHR34220 13 340 5.0E-52 T 23-04-2016 NIAKO_RS29320 cd78b6603ad9b986c21c1fdd29a6f8cb 344 Gene3D G3DSA:3.30.565.10 208 290 1.3E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS29320 cd78b6603ad9b986c21c1fdd29a6f8cb 344 Pfam PF06580 Histidine kinase 153 232 1.6E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS29320 cd78b6603ad9b986c21c1fdd29a6f8cb 344 SUPERFAMILY SSF55874 216 319 7.27E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36825 c927790882bdbbd92cd88657ca427e68 175 Gene3D G3DSA:3.30.310.70 64 151 1.4E-8 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS36825 c927790882bdbbd92cd88657ca427e68 175 Pfam PF03625 Domain of unknown function DUF302 89 136 5.0E-7 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS36825 c927790882bdbbd92cd88657ca427e68 175 SUPERFAMILY SSF103247 65 152 4.05E-8 T 23-04-2016 IPR005180 Domain of unknown function DUF302 NIAKO_RS26240 3f71b4f3427778994f10582a4727cb69 391 Pfam PF00534 Glycosyl transferases group 1 196 361 8.5E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS26240 3f71b4f3427778994f10582a4727cb69 391 Gene3D G3DSA:3.40.50.2000 177 361 2.2E-24 T 23-04-2016 NIAKO_RS26240 3f71b4f3427778994f10582a4727cb69 391 SUPERFAMILY SSF53756 23 381 4.93E-67 T 23-04-2016 NIAKO_RS26240 3f71b4f3427778994f10582a4727cb69 391 PANTHER PTHR12526 74 380 1.4E-49 T 23-04-2016 NIAKO_RS26240 3f71b4f3427778994f10582a4727cb69 391 Pfam PF13579 Glycosyl transferase 4-like domain 45 173 5.4E-14 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 Gene3D G3DSA:3.40.50.1820 35 276 3.3E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 PANTHER PTHR10992 37 277 1.5E-28 T 23-04-2016 NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 Pfam PF12697 Alpha/beta hydrolase family 38 268 8.1E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 SUPERFAMILY SSF53474 35 137 1.79E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 SUPERFAMILY SSF53474 211 272 1.79E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 9.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 9.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS08640 8a6a3b7bde1cb0a7b0724101ca23312c 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 9.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PRINTS PR00739 Glycosyl hydrolase family 26 signature 204 227 1.3E-17 T 23-04-2016 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PRINTS PR00739 Glycosyl hydrolase family 26 signature 243 255 1.3E-17 T 23-04-2016 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PRINTS PR00739 Glycosyl hydrolase family 26 signature 107 121 1.3E-17 T 23-04-2016 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PRINTS PR00739 Glycosyl hydrolase family 26 signature 175 192 1.3E-17 T 23-04-2016 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PANTHER PTHR40079 175 255 1.3E-17 T 23-04-2016 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PIRSF PIRSF018168 4 369 4.9E-88 T 23-04-2016 IPR016714 Mannan endo-1,4-beta-mannosidase GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 PANTHER PTHR40079:SF3 175 255 1.3E-17 T 23-04-2016 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 Pfam PF02156 Glycosyl hydrolase family 26 22 306 3.4E-45 T 23-04-2016 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 SUPERFAMILY SSF51445 20 367 1.62E-67 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21545 2177f86ea504d3ccde95e585ca96e435 373 Gene3D G3DSA:3.20.20.80 19 366 5.3E-94 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 256 2.7E-75 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 PANTHER PTHR22748 1 255 3.2E-141 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 1.1E-79 T 23-04-2016 NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.6E-22 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 PANTHER PTHR22748:SF9 1 255 3.2E-141 T 23-04-2016 NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 Gene3D G3DSA:3.60.10.10 1 256 7.3E-86 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS08135 c92d523b35d4bd019ca0c6d48a890d37 257 SUPERFAMILY SSF56219 1 256 2.36E-83 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 Pfam PF07584 Aerotolerance regulator N-terminal 10 81 9.9E-13 T 23-04-2016 IPR024163 Aerotolerance regulator, N-terminal NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 Gene3D G3DSA:3.40.50.410 93 285 1.8E-32 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 PANTHER PTHR22550:SF8 9 322 1.1E-72 T 23-04-2016 NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 Pfam PF00092 von Willebrand factor type A domain 96 281 7.8E-29 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 SUPERFAMILY SSF53300 93 284 1.93E-39 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 SMART SM00327 94 289 6.9E-24 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS27940 73203c76e8fb446f2ed463595b80161f 330 PANTHER PTHR22550 9 322 1.1E-72 T 23-04-2016 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PANTHER PTHR30371:SF0 84 282 2.2E-71 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PANTHER PTHR30371:SF0 7 61 2.2E-71 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 11 278 17.509 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 263 4.4E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PANTHER PTHR30371 84 282 2.2E-71 T 23-04-2016 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PANTHER PTHR30371 7 61 2.2E-71 T 23-04-2016 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 118 136 2.1E-30 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 136 162 2.1E-30 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 190 218 2.1E-30 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 2.1E-30 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS32375 fb62220fb15d00a5b4cf25048462dd33 285 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 258 5.6E-61 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 Gene3D G3DSA:1.10.10.10 125 181 8.6E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 Gene3D G3DSA:1.10.1740.10 2 111 6.7E-19 T 23-04-2016 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 179 1.1E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 Pfam PF04542 Sigma-70 region 2 25 90 5.5E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 Pfam PF08281 Sigma-70, region 4 125 174 3.4E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 PANTHER PTHR30173 1 195 1.5E-29 T 23-04-2016 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 SUPERFAMILY SSF88946 2 95 5.34E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS23400 8162ba2c6e869c920bcd648415f7e879 200 SUPERFAMILY SSF88659 121 181 5.05E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33285 438d8ab1b16024e7db1024202ae15a79 294 PANTHER PTHR10108 37 225 4.6E-16 T 23-04-2016 NIAKO_RS33285 438d8ab1b16024e7db1024202ae15a79 294 Gene3D G3DSA:3.40.50.150 73 226 6.6E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33285 438d8ab1b16024e7db1024202ae15a79 294 SUPERFAMILY SSF53335 43 216 3.44E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33285 438d8ab1b16024e7db1024202ae15a79 294 Pfam PF08241 Methyltransferase domain 86 176 6.2E-15 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS20095 da731299d58a6139efb5ea46eabbbfb8 486 SUPERFAMILY SSF48452 16 477 7.38E-51 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20095 da731299d58a6139efb5ea46eabbbfb8 486 Gene3D G3DSA:1.25.40.10 205 422 1.3E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20095 da731299d58a6139efb5ea46eabbbfb8 486 Pfam PF07980 SusD family 315 455 3.4E-10 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20095 da731299d58a6139efb5ea46eabbbfb8 486 Pfam PF14322 Starch-binding associating with outer membrane 19 221 1.0E-33 T 23-04-2016 NIAKO_RS36510 4a1720891299b559c1c2bb78b69e3c72 106 PANTHER PTHR13847:SF201 3 89 3.1E-17 T 23-04-2016 NIAKO_RS36510 4a1720891299b559c1c2bb78b69e3c72 106 Pfam PF01266 FAD dependent oxidoreductase 15 88 3.4E-10 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS36510 4a1720891299b559c1c2bb78b69e3c72 106 PANTHER PTHR13847 3 89 3.1E-17 T 23-04-2016 NIAKO_RS36510 4a1720891299b559c1c2bb78b69e3c72 106 Gene3D G3DSA:3.50.50.60 39 105 3.2E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS32575 c8fd4db1e5ec9215e52265f54c75e582 218 PANTHER PTHR35809 3 218 1.5E-56 T 23-04-2016 NIAKO_RS32575 c8fd4db1e5ec9215e52265f54c75e582 218 Pfam PF02666 Phosphatidylserine decarboxylase 50 214 1.5E-27 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NIAKO_RS32575 c8fd4db1e5ec9215e52265f54c75e582 218 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 33 217 2.0E-53 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 SUPERFAMILY SSF52540 1 220 5.73E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 PANTHER PTHR24220 3 221 5.5E-95 T 23-04-2016 NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 SMART SM00382 30 217 2.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 PANTHER PTHR24220:SF342 3 221 5.5E-95 T 23-04-2016 NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 Gene3D G3DSA:3.40.50.300 1 220 5.0E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05910 6e7b84c61bd2046cca92ab98eaf978e3 221 Pfam PF00005 ABC transporter 21 169 2.8E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS13185 8a9c52197c558cae5a94c5c6b20e9795 175 SUPERFAMILY SSF160574 50 153 1.83E-8 T 23-04-2016 NIAKO_RS36600 5b5117851bb624ac3310489654e47de0 207 PANTHER PTHR31157 86 206 8.6E-26 T 23-04-2016 NIAKO_RS36600 5b5117851bb624ac3310489654e47de0 207 Pfam PF00188 Cysteine-rich secretory protein family 91 205 1.6E-14 T 23-04-2016 IPR014044 CAP domain NIAKO_RS36600 5b5117851bb624ac3310489654e47de0 207 Gene3D G3DSA:3.40.33.10 87 197 1.7E-9 T 23-04-2016 IPR014044 CAP domain NIAKO_RS36600 5b5117851bb624ac3310489654e47de0 207 SUPERFAMILY SSF55797 84 206 1.11E-18 T 23-04-2016 IPR014044 CAP domain NIAKO_RS23720 ec311599742f77e3f41ae9a7c187487d 141 Gene3D G3DSA:3.40.630.30 44 139 1.4E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS23720 ec311599742f77e3f41ae9a7c187487d 141 Pfam PF00583 Acetyltransferase (GNAT) family 47 119 1.0E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS23720 ec311599742f77e3f41ae9a7c187487d 141 SUPERFAMILY SSF55729 25 139 3.49E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS07375 85c61a19f2dd7653c3b6ade3a7bb3081 389 PANTHER PTHR21015 107 369 2.0E-12 T 23-04-2016 NIAKO_RS07375 85c61a19f2dd7653c3b6ade3a7bb3081 389 SUPERFAMILY SSF53756 161 362 9.87E-13 T 23-04-2016 NIAKO_RS07375 85c61a19f2dd7653c3b6ade3a7bb3081 389 Gene3D G3DSA:3.40.50.2000 191 358 4.7E-16 T 23-04-2016 NIAKO_RS07375 85c61a19f2dd7653c3b6ade3a7bb3081 389 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 226 360 1.3E-6 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS07375 85c61a19f2dd7653c3b6ade3a7bb3081 389 PANTHER PTHR21015:SF21 107 369 2.0E-12 T 23-04-2016 NIAKO_RS22790 8452cf6cfb13b9b927b764d6fbf7d330 163 Gene3D G3DSA:3.40.109.10 32 74 4.1E-5 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS22790 8452cf6cfb13b9b927b764d6fbf7d330 163 Gene3D G3DSA:3.40.109.10 77 162 1.4E-9 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS22790 8452cf6cfb13b9b927b764d6fbf7d330 163 SUPERFAMILY SSF55469 32 162 2.75E-11 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS23050 f5027f1b4378d5ef097e2d4a9e3f64fa 263 SUPERFAMILY SSF55486 234 263 2.98E-15 T 23-04-2016 NIAKO_RS23050 f5027f1b4378d5ef097e2d4a9e3f64fa 263 SUPERFAMILY SSF55486 100 201 2.98E-15 T 23-04-2016 NIAKO_RS23050 f5027f1b4378d5ef097e2d4a9e3f64fa 263 Gene3D G3DSA:3.40.390.10 106 263 2.9E-12 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS23050 f5027f1b4378d5ef097e2d4a9e3f64fa 263 Pfam PF12388 Dual-action HEIGH metallo-peptidase 61 263 2.0E-45 T 23-04-2016 IPR024653 Peptidase, metallopeptidase M10/M27/M57 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 PANTHER PTHR30128 296 408 3.7E-23 T 23-04-2016 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 Pfam PF00691 OmpA family 310 404 1.9E-18 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 SUPERFAMILY SSF103088 299 413 9.42E-24 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 Pfam PF06078 Bacterial protein of unknown function (DUF937) 8 135 1.2E-20 T 23-04-2016 IPR009282 Protein of unknown function DUF937 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 PRINTS PR01021 OMPA domain signature 356 372 5.1E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 PRINTS PR01021 OMPA domain signature 311 333 5.1E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 PRINTS PR01021 OMPA domain signature 341 356 5.1E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS31490 218af5038729d17f0ac2100c0dce0985 416 Gene3D G3DSA:3.30.1330.60 300 413 5.7E-28 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 SUPERFAMILY SSF51430 1 290 1.31E-77 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 Gene3D G3DSA:3.20.20.100 1 295 1.0E-77 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.5E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 PRINTS PR00069 Aldo-keto reductase signature 134 151 2.5E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 PRINTS PR00069 Aldo-keto reductase signature 103 121 2.5E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 PANTHER PTHR11732 1 295 4.9E-119 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 PANTHER PTHR11732:SF254 1 295 4.9E-119 T 23-04-2016 NIAKO_RS35920 51e557ef2d0d87aa3025bb60a9364e38 298 Pfam PF00248 Aldo/keto reductase family 15 288 4.1E-60 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 Pfam PF01979 Amidohydrolase family 51 377 4.9E-25 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 Gene3D G3DSA:2.30.40.10 6 60 2.6E-4 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 SUPERFAMILY SSF51556 54 362 5.38E-43 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 Gene3D G3DSA:3.20.20.140 61 379 7.8E-37 T 23-04-2016 NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 PANTHER PTHR11271 16 215 5.5E-27 T 23-04-2016 NIAKO_RS28285 0df13e4fcbdcb137cea3c37318164423 389 PANTHER PTHR11271 233 371 5.5E-27 T 23-04-2016 NIAKO_RS20115 f9666a56443eb0411d0707151ee1a3ab 364 Pfam PF03572 Peptidase family S41 138 348 1.0E-15 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS20115 f9666a56443eb0411d0707151ee1a3ab 364 Gene3D G3DSA:3.90.226.10 236 350 1.1E-20 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS20115 f9666a56443eb0411d0707151ee1a3ab 364 Gene3D G3DSA:3.90.226.10 125 199 1.1E-20 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS20115 f9666a56443eb0411d0707151ee1a3ab 364 SUPERFAMILY SSF52096 61 219 2.82E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS20115 f9666a56443eb0411d0707151ee1a3ab 364 SUPERFAMILY SSF52096 264 354 2.82E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29360 a6d0602242b7b0300eb02f1b3f128859 136 PANTHER PTHR26402 6 128 2.4E-21 T 23-04-2016 NIAKO_RS29360 a6d0602242b7b0300eb02f1b3f128859 136 Gene3D G3DSA:3.40.50.2300 4 130 2.5E-27 T 23-04-2016 NIAKO_RS29360 a6d0602242b7b0300eb02f1b3f128859 136 SUPERFAMILY SSF52172 8 130 1.11E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS29360 a6d0602242b7b0300eb02f1b3f128859 136 Pfam PF00072 Response regulator receiver domain 8 124 4.8E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS29360 a6d0602242b7b0300eb02f1b3f128859 136 SMART SM00448 6 124 5.3E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 PIRSF PIRSF036594 1 304 2.0E-79 T 23-04-2016 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 UniPathway: UPA00344 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 PANTHER PTHR10192 140 293 5.5E-55 T 23-04-2016 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 SUPERFAMILY SSF55040 1 139 1.83E-40 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 Pfam PF00994 Probable molybdopterin binding domain 150 292 2.4E-31 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 Gene3D G3DSA:3.40.980.10 145 298 5.3E-48 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 147 287 3.4E-31 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 Pfam PF01967 MoaC family 1 135 4.7E-40 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 209 222 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 SUPERFAMILY SSF53218 147 297 6.15E-43 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 SMART SM00852 150 293 1.3E-22 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS02730 3b2edfe42b0ff589e2323152ee96c460 304 Gene3D G3DSA:3.30.70.640 1 139 5.9E-43 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 SUPERFAMILY SSF56349 90 381 3.77E-41 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 PANTHER PTHR30349:SF26 16 402 1.3E-57 T 23-04-2016 NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 Gene3D G3DSA:1.10.150.130 91 173 5.0E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 Gene3D G3DSA:1.10.443.10 192 379 4.4E-27 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 Pfam PF13102 Phage integrase SAM-like domain 83 139 1.7E-6 T 23-04-2016 IPR025269 Phage integrase SAM-like domain NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 Pfam PF00589 Phage integrase family 226 373 2.0E-16 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS30250 fe4ffc3b2b2b4f4e0a2b4d3d0b7314f5 402 PANTHER PTHR30349 16 402 1.3E-57 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 TIGRFAM TIGR00400 mgtE: magnesium transporter 28 455 5.1E-92 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Gene3D G3DSA:1.25.60.10 28 123 7.5E-9 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 PANTHER PTHR41394 2 454 5.3E-35 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 SUPERFAMILY SSF158791 27 128 1.7E-12 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Pfam PF01769 Divalent cation transporter 317 448 1.3E-30 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Gene3D G3DSA:1.10.357.20 273 454 4.0E-58 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 SUPERFAMILY SSF54631 131 267 6.19E-24 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Pfam PF03448 MgtE intracellular N domain 28 129 5.5E-12 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Pfam PF00571 CBS domain 131 178 2.2E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Pfam PF00571 CBS domain 204 249 6.1E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 Gene3D G3DSA:3.10.580.10 124 257 9.5E-15 T 23-04-2016 NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 SMART SM00924 28 131 1.4E-8 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NIAKO_RS02440 6a3be6ee908d39ca7da82167ece4a255 459 SUPERFAMILY SSF161093 274 454 5.36E-47 T 23-04-2016 NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 SUPERFAMILY SSF51011 440 536 3.78E-5 T 23-04-2016 NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 Pfam PF12891 Glycoside hydrolase family 44 88 314 2.7E-49 T 23-04-2016 IPR024745 Glycoside hydrolase, family 44 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 SUPERFAMILY SSF51445 54 147 5.84E-10 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 SUPERFAMILY SSF51445 354 423 5.84E-10 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 SUPERFAMILY SSF51445 175 322 5.84E-10 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11960 e514e800f86d2839be5f60656376fe3e 718 Gene3D G3DSA:2.60.120.260 560 629 1.8E-4 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PANTHER PTHR11405:SF1 13 320 2.1E-59 T 23-04-2016 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 4.9E-13 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 4.9E-13 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 4.9E-13 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PANTHER PTHR11405 13 320 2.1E-59 T 23-04-2016 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 Gene3D G3DSA:3.40.50.1370 1 157 5.5E-43 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 Gene3D G3DSA:3.40.50.1370 158 306 5.9E-38 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 160 1.3E-25 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 190 316 3.2E-22 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 8.9E-7 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 146 163 8.9E-7 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 8.9E-7 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 8.9E-7 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS28030 8c27551a2093fee3aa0f78adc7f00ae4 322 SUPERFAMILY SSF53671 1 320 4.32E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 Gene3D G3DSA:3.40.50.450 52 235 1.2E-63 T 23-04-2016 NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 SUPERFAMILY SSF102405 35 227 4.12E-60 T 23-04-2016 NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 55 229 2.6E-43 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 Pfam PF03641 Possible lysine decarboxylase 97 226 1.5E-34 T 23-04-2016 IPR031100 LOG family NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 PANTHER PTHR31223 37 229 4.0E-79 T 23-04-2016 NIAKO_RS29650 378076ecfa449cb5b60f5a7071efb6a1 249 PANTHER PTHR31223:SF1 37 229 4.0E-79 T 23-04-2016 NIAKO_RS03010 b49d90347ed83ed408fd3d14ffaa37f8 81 PANTHER PTHR34309:SF1 2 81 7.1E-14 T 23-04-2016 NIAKO_RS03010 b49d90347ed83ed408fd3d14ffaa37f8 81 SUPERFAMILY SSF143744 2 80 6.15E-21 T 23-04-2016 NIAKO_RS03010 b49d90347ed83ed408fd3d14ffaa37f8 81 Pfam PF03928 Haem-degrading 2 77 3.6E-16 T 23-04-2016 IPR005624 Haem-degrading NIAKO_RS03010 b49d90347ed83ed408fd3d14ffaa37f8 81 PANTHER PTHR34309 2 81 7.1E-14 T 23-04-2016 NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 SUPERFAMILY SSF111369 58 302 2.35E-50 T 23-04-2016 NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 294 7.5E-14 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 377 7.7E-77 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 PANTHER PTHR30158 1 385 9.9E-98 T 23-04-2016 NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 Gene3D G3DSA:2.40.50.100 178 208 6.9E-16 T 23-04-2016 NIAKO_RS25140 a4453245be257ec55ff97164724a71c9 391 Gene3D G3DSA:2.40.50.100 70 103 6.9E-16 T 23-04-2016 NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 SUPERFAMILY SSF51735 13 97 3.43E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 PANTHER PTHR24321:SF6 12 98 8.0E-17 T 23-04-2016 NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 PANTHER PTHR24321 12 98 8.0E-17 T 23-04-2016 NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 9.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 60 80 9.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 96 2.0E-20 T 23-04-2016 NIAKO_RS16270 3f24f9b8f7dfb362afa4c21e8ec2bd48 98 Gene3D G3DSA:3.40.50.720 13 97 7.2E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31185 649e88e5b7356d966a35b779dd4d020e 149 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 9 147 16.163 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NIAKO_RS31185 649e88e5b7356d966a35b779dd4d020e 149 SUPERFAMILY SSF55486 19 144 4.39E-32 T 23-04-2016 NIAKO_RS31185 649e88e5b7356d966a35b779dd4d020e 149 Gene3D G3DSA:3.40.390.30 22 145 4.9E-32 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 NIAKO_RS31185 649e88e5b7356d966a35b779dd4d020e 149 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.4E-28 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NIAKO_RS31185 649e88e5b7356d966a35b779dd4d020e 149 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 143 1.7E-28 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NIAKO_RS01065 3905e96b0e972d82205916d1047f4a1d 889 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 813 888 1.6E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS01065 3905e96b0e972d82205916d1047f4a1d 889 SUPERFAMILY SSF89372 227 375 4.58E-8 T 23-04-2016 NIAKO_RS01065 3905e96b0e972d82205916d1047f4a1d 889 SUPERFAMILY SSF89372 511 694 8.5E-8 T 23-04-2016 NIAKO_RS01065 3905e96b0e972d82205916d1047f4a1d 889 SUPERFAMILY SSF89372 367 524 2.35E-10 T 23-04-2016 NIAKO_RS01065 3905e96b0e972d82205916d1047f4a1d 889 SUPERFAMILY SSF89372 13 209 2.48E-10 T 23-04-2016 NIAKO_RS01850 0eef6324dcff8164f0858be509e847e0 112 Pfam PF04519 Polymer-forming cytoskeletal 15 111 7.7E-29 T 23-04-2016 IPR007607 Protein of unknown function DUF583 NIAKO_RS01850 0eef6324dcff8164f0858be509e847e0 112 PANTHER PTHR35024 15 112 3.4E-23 T 23-04-2016 NIAKO_RS01850 0eef6324dcff8164f0858be509e847e0 112 PANTHER PTHR35024:SF2 15 112 3.4E-23 T 23-04-2016 NIAKO_RS22885 ccef2d9fe6d73c34b734a568b248525f 160 Gene3D G3DSA:1.20.120.450 14 147 1.8E-9 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS22885 ccef2d9fe6d73c34b734a568b248525f 160 SUPERFAMILY SSF109854 6 149 5.86E-15 T 23-04-2016 NIAKO_RS22885 ccef2d9fe6d73c34b734a568b248525f 160 Pfam PF07609 Protein of unknown function (DUF1572) 18 146 2.4E-10 T 23-04-2016 IPR011466 Protein of unknown function DUF1572 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 Pfam PF00664 ABC transporter transmembrane region 30 285 1.2E-5 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 PANTHER PTHR24222:SF30 140 551 2.9E-66 T 23-04-2016 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 Pfam PF00005 ABC transporter 359 507 1.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 PANTHER PTHR24222 140 551 2.9E-66 T 23-04-2016 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 Gene3D G3DSA:3.40.50.300 344 550 1.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 SUPERFAMILY SSF90123 8 312 1.44E-20 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 SUPERFAMILY SSF90123 484 493 1.44E-20 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 SMART SM00382 368 550 4.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 Gene3D G3DSA:1.20.1560.10 6 313 3.3E-12 T 23-04-2016 NIAKO_RS21235 61246e6f0439f4054d5462c7991c91f9 551 SUPERFAMILY SSF52540 341 551 3.09E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 PANTHER PTHR22916 162 291 5.2E-57 T 23-04-2016 NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 PANTHER PTHR22916 1 141 5.2E-57 T 23-04-2016 NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 PANTHER PTHR22916:SF26 162 291 5.2E-57 T 23-04-2016 NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 PANTHER PTHR22916:SF26 1 141 5.2E-57 T 23-04-2016 NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 SUPERFAMILY SSF53448 1 269 1.16E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 Gene3D G3DSA:3.90.550.10 4 253 5.6E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS02530 f5520a5f38188c2859677641cc523d6e 342 Pfam PF00535 Glycosyl transferase family 2 7 125 5.9E-26 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS00315 965a4c06677d578973a834abeb62e257 211 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 207 2.2E-53 T 23-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein NIAKO_RS00315 965a4c06677d578973a834abeb62e257 211 SUPERFAMILY SSF141318 39 206 3.53E-21 T 23-04-2016 NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 PANTHER PTHR24220:SF0 5 227 2.4E-107 T 23-04-2016 NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 PANTHER PTHR24220 5 227 2.4E-107 T 23-04-2016 NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 SMART SM00382 32 226 6.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 Gene3D G3DSA:3.40.50.300 4 230 1.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 SUPERFAMILY SSF52540 20 229 6.53E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11350 ea202dc33c5415a936527ab680e525b9 305 Pfam PF00005 ABC transporter 23 164 1.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS08445 666f0184c5c7ecc42dece7bc5d5c55fa 120 PIRSF PIRSF033199 6 120 1.8E-49 T 23-04-2016 IPR014580 Uncharacterised conserved protein UCP033199 NIAKO_RS08445 666f0184c5c7ecc42dece7bc5d5c55fa 120 Gene3D G3DSA:1.10.8.290 6 119 2.4E-55 T 23-04-2016 IPR023204 SP1917 domain NIAKO_RS08445 666f0184c5c7ecc42dece7bc5d5c55fa 120 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 10 119 5.9E-53 T 23-04-2016 IPR014580 Uncharacterised conserved protein UCP033199 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 Gene3D G3DSA:2.40.50.100 198 222 1.7E-14 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 Gene3D G3DSA:2.40.50.100 62 95 1.7E-14 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 SUPERFAMILY SSF111369 120 255 1.7E-11 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 PANTHER PTHR32347 1 353 3.3E-59 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 PANTHER PTHR32347 384 447 3.3E-59 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 SUPERFAMILY SSF111369 49 116 6.54E-9 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 PANTHER PTHR32347:SF14 1 353 3.3E-59 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 PANTHER PTHR32347:SF14 384 447 3.3E-59 T 23-04-2016 NIAKO_RS33710 9999b097dbd993a26a5139d1fff53a1b 456 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 282 4.7E-20 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 256 271 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 PANTHER PTHR30031:SF0 5 534 9.0E-293 T 23-04-2016 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 Gene3D G3DSA:3.90.228.20 342 533 4.4E-127 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 Gene3D G3DSA:3.90.228.20 219 281 4.4E-127 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 PANTHER PTHR30031 5 534 9.0E-293 T 23-04-2016 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 13 534 2.0E-218 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 17 534 52.066 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 PIRSF PIRSF006294 7 534 4.1E-230 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 486 1.6E-216 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 SUPERFAMILY SSF68923 9 215 1.67E-71 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 SUPERFAMILY SSF53795 219 534 4.88E-136 T 23-04-2016 NIAKO_RS26905 4403e9e45c56ed32ac55abc137cd2ece 534 Gene3D G3DSA:3.40.449.10 24 216 1.7E-68 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 PANTHER PTHR23024 58 288 1.5E-49 T 23-04-2016 NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 Pfam PF00326 Prolyl oligopeptidase family 111 287 2.1E-12 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 SUPERFAMILY SSF52266 303 502 2.44E-38 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 PANTHER PTHR23024:SF41 58 288 1.5E-49 T 23-04-2016 NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 Gene3D G3DSA:3.40.50.1820 53 288 1.5E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 Gene3D G3DSA:3.40.50.1110 300 502 6.7E-36 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 345 493 3.0E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS37505 1f5ad5a134da0ed2fd48e880219675ad 504 SUPERFAMILY SSF53474 59 295 5.4E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS02385 97d90aa676dc0222b51995af55d19475 250 PANTHER PTHR30269:SF24 7 248 2.6E-40 T 23-04-2016 NIAKO_RS02385 97d90aa676dc0222b51995af55d19475 250 PANTHER PTHR30269 7 248 2.6E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS02385 97d90aa676dc0222b51995af55d19475 250 Pfam PF01925 Sulfite exporter TauE/SafE 16 244 1.4E-18 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 SUPERFAMILY SSF48371 587 721 5.31E-9 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 PANTHER PTHR11533 40 510 2.5E-90 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 355 367 5.9E-7 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 303 313 5.9E-7 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 336 351 5.9E-7 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 SUPERFAMILY SSF55486 250 491 5.49E-60 T 23-04-2016 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 Pfam PF01433 Peptidase family M1 46 423 1.3E-59 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 Gene3D G3DSA:1.10.390.10 349 492 1.1E-29 T 23-04-2016 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 SUPERFAMILY SSF63737 37 243 3.14E-34 T 23-04-2016 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 PANTHER PTHR11533:SF163 40 510 2.5E-90 T 23-04-2016 NIAKO_RS25255 e92e3dc1dc19b6338740bdd1330bd7ef 832 Gene3D G3DSA:1.25.10.10 588 712 1.7E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PANTHER PTHR24423 6 12 2.4E-63 T 23-04-2016 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PANTHER PTHR24423 103 322 2.4E-63 T 23-04-2016 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 SMART SM00387 214 328 1.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 Pfam PF00512 His Kinase A (phospho-acceptor) domain 106 171 1.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 Gene3D G3DSA:1.10.287.130 97 164 6.4E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 SUPERFAMILY SSF55874 161 322 6.02E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 SUPERFAMILY SSF47384 92 172 1.84E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 Gene3D G3DSA:3.30.565.10 172 328 2.2E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 SMART SM00388 105 171 1.5E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 322 6.2E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 265 7.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 279 7.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 7.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS32600 4a1eb4131fb656f36e61c847027405e0 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 7.4E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37110 b8f6ccb0d11cc615a8fc906c96d3db93 412 SUPERFAMILY SSF55874 285 379 5.59E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37110 b8f6ccb0d11cc615a8fc906c96d3db93 412 Pfam PF06580 Histidine kinase 223 301 2.9E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS37110 b8f6ccb0d11cc615a8fc906c96d3db93 412 PANTHER PTHR34220:SF1 170 412 5.8E-61 T 23-04-2016 NIAKO_RS37110 b8f6ccb0d11cc615a8fc906c96d3db93 412 PANTHER PTHR34220 170 412 5.8E-61 T 23-04-2016 NIAKO_RS07540 bffad39cb3d87618a3d6c84fde7af7f0 231 SUPERFAMILY SSF52141 33 230 5.23E-15 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS07540 bffad39cb3d87618a3d6c84fde7af7f0 231 Pfam PF16265 Domain of unknown function (DUF4918) 9 228 3.5E-93 T 23-04-2016 IPR032579 Domain of unknown function DUF4918 NIAKO_RS07540 bffad39cb3d87618a3d6c84fde7af7f0 231 Gene3D G3DSA:3.40.470.10 14 229 9.5E-41 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 SUPERFAMILY SSF56935 706 888 1.51E-11 T 23-04-2016 NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 SUPERFAMILY SSF56935 144 281 1.51E-11 T 23-04-2016 NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 SUPERFAMILY SSF56935 321 436 1.51E-11 T 23-04-2016 NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 SUPERFAMILY SSF56935 467 629 1.51E-11 T 23-04-2016 NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 Pfam PF13620 Carboxypeptidase regulatory-like domain 27 95 5.4E-10 T 23-04-2016 NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 Gene3D G3DSA:2.60.40.1120 27 122 1.6E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12110 73b9e5746627d8b66877cce248b98afa 892 SUPERFAMILY SSF49464 26 121 2.88E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30610 f58fc9eb84a52a2ee1c0403c52cadb4a 213 SUPERFAMILY SSF56925 13 202 2.25E-9 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS30610 f58fc9eb84a52a2ee1c0403c52cadb4a 213 Gene3D G3DSA:2.40.160.20 92 203 5.2E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 270 8.1E-92 T 23-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 PANTHER PTHR11904 1 273 5.6E-106 T 23-04-2016 IPR001369 PNP/MTAP phosphorylase NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 PIRSF PIRSF000477 1 273 3.0E-92 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 271 4.4E-91 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 Pfam PF01048 Phosphorylase superfamily 26 270 1.2E-45 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 PANTHER PTHR11904:SF9 1 273 5.6E-106 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 Gene3D G3DSA:3.40.50.1580 3 273 1.7E-94 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 SUPERFAMILY SSF53167 5 272 9.43E-82 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS00930 fb5a67b6377cf4814c9675af1d38a04e 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 23-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Pfam PF02824 TGS domain 2 61 2.6E-13 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 3.8E-39 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 332 360 3.8E-39 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 3.8E-39 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 3.8E-39 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 365 388 3.8E-39 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PANTHER PTHR11451 1 646 5.1E-272 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 8.1E-13 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.30.980.10 66 132 9.0E-34 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.30.980.10 189 225 9.0E-34 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 639 6.6E-202 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 537 2.4E-33 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 SUPERFAMILY SSF52954 537 642 1.22E-33 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 SUPERFAMILY SSF55681 244 533 1.37E-78 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 PANTHER PTHR11451:SF5 1 646 5.1E-272 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.30.54.20 133 188 5.8E-20 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.40.50.800 539 643 5.4E-37 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 SUPERFAMILY SSF55186 63 242 6.28E-58 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 SUPERFAMILY SSF81271 2 62 5.67E-18 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.30.930.10 243 538 1.7E-95 T 23-04-2016 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 642 31.862 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 SMART SM00863 171 220 1.3E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Gene3D G3DSA:3.10.20.30 1 64 3.1E-27 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS10770 12fc0eab7689583074d997465f618e70 646 Pfam PF03129 Anticodon binding domain 549 637 1.9E-22 T 23-04-2016 IPR004154 Anticodon-binding NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 Pfam PF01544 CorA-like Mg2+ transporter protein 23 307 1.3E-55 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 SUPERFAMILY SSF143865 17 246 3.27E-40 T 23-04-2016 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 PANTHER PTHR21535 6 312 2.0E-65 T 23-04-2016 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 Gene3D G3DSA:1.20.58.340 130 234 2.8E-7 T 23-04-2016 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 SUPERFAMILY SSF144083 248 310 3.27E-14 T 23-04-2016 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 Gene3D G3DSA:1.20.58.340 237 311 3.1E-20 T 23-04-2016 NIAKO_RS21215 476cedb559861640b02fd3b383ba4043 312 PANTHER PTHR21535:SF40 6 312 2.0E-65 T 23-04-2016 NIAKO_RS06695 eb9e31be17d40885abccaa8c920d7fc6 464 SUPERFAMILY SSF52266 27 234 8.86E-33 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS06695 eb9e31be17d40885abccaa8c920d7fc6 464 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 225 2.0E-15 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS06695 eb9e31be17d40885abccaa8c920d7fc6 464 PANTHER PTHR30383:SF6 24 464 2.7E-86 T 23-04-2016 NIAKO_RS06695 eb9e31be17d40885abccaa8c920d7fc6 464 PANTHER PTHR30383 24 464 2.7E-86 T 23-04-2016 NIAKO_RS06695 eb9e31be17d40885abccaa8c920d7fc6 464 Gene3D G3DSA:3.40.50.1110 30 229 2.8E-26 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 Pfam PF01546 Peptidase family M20/M25/M40 145 407 5.1E-13 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 Gene3D G3DSA:3.40.630.10 10 215 2.8E-104 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 Gene3D G3DSA:3.40.630.10 329 413 2.8E-104 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 PANTHER PTHR11014:SF3 11 96 3.4E-148 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 PANTHER PTHR11014:SF3 137 416 3.4E-148 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 144 183 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 PANTHER PTHR11014 11 96 3.4E-148 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 PANTHER PTHR11014 137 416 3.4E-148 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 TIGRFAM TIGR01882 peptidase-T: peptidase T 11 414 3.8E-130 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 PIRSF PIRSF037215 4 415 9.9E-161 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 Gene3D G3DSA:3.30.70.360 216 326 4.0E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 SUPERFAMILY SSF55031 215 326 6.8E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 Pfam PF07687 Peptidase dimerisation domain 216 307 3.5E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 SUPERFAMILY SSF53187 10 216 3.52E-69 T 23-04-2016 NIAKO_RS22455 b71cbdd3d7b4b35de69bf38dfc65c0c8 416 SUPERFAMILY SSF53187 329 408 3.52E-69 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 Gene3D G3DSA:2.40.50.100 55 85 8.4E-18 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 Gene3D G3DSA:2.40.50.100 216 249 8.4E-18 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 Pfam PF13437 HlyD family secretion protein 218 329 1.3E-18 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 PANTHER PTHR30386:SF0 11 350 9.6E-80 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 SUPERFAMILY SSF111369 188 291 4.97E-13 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 SUPERFAMILY SSF111369 52 133 1.26E-11 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 SUPERFAMILY SSF111369 121 179 5.75E-5 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 Pfam PF13533 Biotin-lipoyl like 56 100 2.6E-10 T 23-04-2016 NIAKO_RS32255 90abe2453c57f5ddc745df9d2a56ec79 350 PANTHER PTHR30386 11 350 9.6E-80 T 23-04-2016 NIAKO_RS05840 4bde4898647afd3701e91ffdc023c6e1 325 Pfam PF03631 Virulence factor BrkB 48 299 5.6E-51 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS05840 4bde4898647afd3701e91ffdc023c6e1 325 PANTHER PTHR30213 2 325 8.9E-38 T 23-04-2016 NIAKO_RS05840 4bde4898647afd3701e91ffdc023c6e1 325 PIRSF PIRSF035875 32 319 1.9E-49 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS05840 4bde4898647afd3701e91ffdc023c6e1 325 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 38 300 7.3E-28 T 23-04-2016 IPR017039 Virulence factor BrkB NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Gene3D G3DSA:3.30.70.240 396 475 2.8E-27 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 SUPERFAMILY SSF54980 298 383 3.96E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Pfam PF00679 Elongation factor G C-terminus 394 473 2.1E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Pfam PF03144 Elongation factor Tu domain 2 215 284 1.3E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 SMART SM00838 394 478 0.0011 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 SUPERFAMILY SSF54980 394 507 2.54E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 138 7.0E-22 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PANTHER PTHR23115 2 587 1.4E-260 T 23-04-2016 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Pfam PF00009 Elongation factor Tu GTP binding domain 2 192 3.2E-54 T 23-04-2016 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Gene3D G3DSA:3.30.70.870 300 395 1.4E-33 T 23-04-2016 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Gene3D G3DSA:3.40.50.300 2 196 1.7E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PANTHER PTHR23115:SF14 2 587 1.4E-260 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Gene3D G3DSA:2.40.50.250 477 571 1.4E-34 T 23-04-2016 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PRINTS PR00315 GTP-binding elongation factor signature 121 130 2.6E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PRINTS PR00315 GTP-binding elongation factor signature 69 79 2.6E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.6E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 PRINTS PR00315 GTP-binding elongation factor signature 5 18 2.6E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 Gene3D G3DSA:2.40.30.10 198 299 1.0E-25 T 23-04-2016 NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 SUPERFAMILY SSF50447 149 295 6.24E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 SUPERFAMILY SSF52540 2 196 2.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32170 8e82fd2f09ffe7c254b4f45c0b016843 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 593 6.2E-268 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 NIAKO_RS20785 ff28d5a21a28bc62face9757b0ff239a 260 SUPERFAMILY SSF48317 46 233 9.42E-26 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20785 ff28d5a21a28bc62face9757b0ff239a 260 Pfam PF01569 PAP2 superfamily 141 228 2.8E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20785 ff28d5a21a28bc62face9757b0ff239a 260 SMART SM00014 122 223 7.6E-8 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20785 ff28d5a21a28bc62face9757b0ff239a 260 Gene3D G3DSA:1.20.144.10 82 230 4.5E-25 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 SUPERFAMILY SSF52374 1 134 1.1E-10 T 23-04-2016 NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 Gene3D G3DSA:3.90.79.10 155 293 2.0E-20 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 Gene3D G3DSA:3.40.50.620 1 134 9.5E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 SUPERFAMILY SSF55811 156 284 8.67E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 Pfam PF00293 NUDIX domain 164 277 1.8E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS28945 caa943349f08bebee7d0630e0222df3b 298 PANTHER PTHR22769 160 275 4.2E-12 T 23-04-2016 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 SMART SM00387 273 398 1.4E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 SUPERFAMILY SSF55785 29 142 1.47E-15 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 46 148 2.6E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 PANTHER PTHR24423 36 396 1.5E-64 T 23-04-2016 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 395 1.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 376 1.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 1.8E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Pfam PF08447 PAS fold 49 135 4.6E-11 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 PANTHER PTHR24423:SF518 36 396 1.5E-64 T 23-04-2016 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 228 3.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 397 1.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 SUPERFAMILY SSF47384 151 230 4.32E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 SMART SM00388 164 232 2.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Gene3D G3DSA:3.30.450.20 34 168 4.6E-22 T 23-04-2016 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Gene3D G3DSA:1.10.287.130 169 228 8.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 Gene3D G3DSA:3.30.565.10 236 396 1.9E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28725 3aedfec94924f0a4aba504f103ef2d21 398 SUPERFAMILY SSF55874 222 395 7.07E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30180 6ee1427ce01acefc61d8dd57e321c4fd 293 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 228 272 4.7E-7 T 23-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 PANTHER PTHR22925 26 207 6.6E-14 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 SUPERFAMILY SSF75005 67 298 4.71E-34 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 Gene3D G3DSA:2.115.10.20 248 287 5.3E-4 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 Pfam PF04616 Glycosyl hydrolases family 43 70 252 4.6E-11 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 Gene3D G3DSA:2.115.10.20 68 247 4.1E-28 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17930 a4544b9bc84dcb6b973b9513f4b84d5f 309 PANTHER PTHR22925:SF35 26 207 6.6E-14 T 23-04-2016 NIAKO_RS02925 e4dced8f8f622ee9955a4cd7fa88bca4 354 PANTHER PTHR22893 12 354 5.1E-143 T 23-04-2016 NIAKO_RS02925 e4dced8f8f622ee9955a4cd7fa88bca4 354 Gene3D G3DSA:3.20.20.70 2 353 1.6E-116 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02925 e4dced8f8f622ee9955a4cd7fa88bca4 354 PANTHER PTHR22893:SF14 12 354 5.1E-143 T 23-04-2016 NIAKO_RS02925 e4dced8f8f622ee9955a4cd7fa88bca4 354 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 12 329 7.1E-79 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NIAKO_RS02925 e4dced8f8f622ee9955a4cd7fa88bca4 354 SUPERFAMILY SSF51395 2 354 2.29E-108 T 23-04-2016 NIAKO_RS15650 769348363eb15baccbc5ce2bd0c9e9af 133 SMART SM00448 3 123 9.4E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15650 769348363eb15baccbc5ce2bd0c9e9af 133 SUPERFAMILY SSF52172 2 128 2.28E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15650 769348363eb15baccbc5ce2bd0c9e9af 133 PANTHER PTHR26402 3 131 3.5E-19 T 23-04-2016 NIAKO_RS15650 769348363eb15baccbc5ce2bd0c9e9af 133 Pfam PF00072 Response regulator receiver domain 5 114 4.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15650 769348363eb15baccbc5ce2bd0c9e9af 133 Gene3D G3DSA:3.40.50.2300 3 125 2.7E-23 T 23-04-2016 NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 PANTHER PTHR10681:SF68 237 379 6.4E-17 T 23-04-2016 NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 Pfam PF14289 Domain of unknown function (DUF4369) 18 111 2.7E-9 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 Pfam PF13905 Thioredoxin-like 265 355 5.2E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 PANTHER PTHR10681 237 379 6.4E-17 T 23-04-2016 NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 SUPERFAMILY SSF52833 237 377 1.3E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 ProSitePatterns PS00194 Thioredoxin family active site. 269 287 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS37165 621306d1f2d3646a90272d8970ccbd3d 379 Gene3D G3DSA:3.40.30.10 231 377 7.5E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 SUPERFAMILY SSF56672 3 237 8.63E-91 T 23-04-2016 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Hamap MF_01113 DNA polymerase IV [dinB]. 3 357 39.812 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Pfam PF11798 IMS family HHH motif 169 200 6.2E-8 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 PANTHER PTHR11076 2 347 2.7E-153 T 23-04-2016 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 SUPERFAMILY SSF100879 241 342 8.48E-28 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Gene3D G3DSA:3.30.1490.100 244 347 4.4E-32 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Gene3D G3DSA:1.10.150.20 168 238 2.2E-23 T 23-04-2016 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Pfam PF00817 impB/mucB/samB family 9 157 1.5E-49 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 348 1.9E-21 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS06850 cb24a3271aac93430b1d9eac490e433c 358 Gene3D G3DSA:3.30.70.270 68 166 1.2E-32 T 23-04-2016 NIAKO_RS27280 6b1842cf0aeb7a3e20dbc1f435966a60 525 SUPERFAMILY SSF46626 157 261 7.16E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS27280 6b1842cf0aeb7a3e20dbc1f435966a60 525 Gene3D G3DSA:1.10.760.10 166 258 2.1E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16260 5f070ddc3cba4ea0d12cc6101a2ed443 83 Pfam PF00072 Response regulator receiver domain 20 82 1.7E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16260 5f070ddc3cba4ea0d12cc6101a2ed443 83 SUPERFAMILY SSF52172 14 83 5.69E-14 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS16260 5f070ddc3cba4ea0d12cc6101a2ed443 83 PANTHER PTHR26402 18 83 2.3E-14 T 23-04-2016 NIAKO_RS16260 5f070ddc3cba4ea0d12cc6101a2ed443 83 Gene3D G3DSA:3.40.50.2300 14 83 3.2E-15 T 23-04-2016 NIAKO_RS16260 5f070ddc3cba4ea0d12cc6101a2ed443 83 PANTHER PTHR26402:SF579 18 83 2.3E-14 T 23-04-2016 NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 PANTHER PTHR31793 5 132 3.9E-36 T 23-04-2016 NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 PANTHER PTHR31793:SF9 5 132 3.9E-36 T 23-04-2016 NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 PIRSF PIRSF003230 2 136 4.4E-35 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 Gene3D G3DSA:3.10.129.10 2 131 8.6E-40 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 120 8.4E-27 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 Pfam PF03061 Thioesterase superfamily 18 102 4.7E-13 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS21640 b546916db63027734e01a9413679eb81 137 SUPERFAMILY SSF54637 4 132 1.0E-34 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 Pfam PF00072 Response regulator receiver domain 12 124 1.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 SMART SM00421 157 214 3.1E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 PANTHER PTHR26402 10 220 8.0E-52 T 23-04-2016 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 SUPERFAMILY SSF46894 153 221 2.65E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 Gene3D G3DSA:1.10.10.10 165 221 3.9E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 SUPERFAMILY SSF52172 10 137 4.13E-32 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 PANTHER PTHR26402:SF151 10 220 8.0E-52 T 23-04-2016 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 SMART SM00448 10 123 6.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 3.0E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS24915 9758e6be01a1bf5ff167a20f694ef56c 224 Gene3D G3DSA:3.40.50.2300 10 164 1.1E-35 T 23-04-2016 NIAKO_RS15620 b6e1523532c13c53b3db3f059fa672e7 81 SUPERFAMILY SSF54928 2 74 2.85E-12 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15620 b6e1523532c13c53b3db3f059fa672e7 81 SMART SM00360 2 74 1.7E-6 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS15620 b6e1523532c13c53b3db3f059fa672e7 81 Gene3D G3DSA:3.30.70.330 2 74 2.9E-11 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15620 b6e1523532c13c53b3db3f059fa672e7 81 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 5.8E-9 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 Pfam PF00581 Rhodanese-like domain 137 231 4.5E-12 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 Gene3D G3DSA:3.40.250.10 115 235 2.5E-34 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 Pfam PF12368 Rhodanase C-terminal 245 307 1.5E-19 T 23-04-2016 IPR022111 Rhodanase, C-terminal NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 SUPERFAMILY SSF52821 113 254 1.37E-30 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 SMART SM00450 135 236 6.2E-24 T 23-04-2016 IPR001763 Rhodanese-like domain NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 276 37.956 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 PANTHER PTHR22778 1 321 1.4E-102 T 23-04-2016 NIAKO_RS07580 5454aecb6b95bd22a146771a918aceb4 354 PANTHER PTHR22778:SF21 1 321 1.4E-102 T 23-04-2016 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 30 52 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 77 98 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 156 174 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 175 196 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 132 155 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 112 129 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PRINTS PR00721 Stomatin signature 200 223 5.8E-70 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 Pfam PF01145 SPFH domain / Band 7 family 28 196 3.3E-33 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 SMART SM00244 23 180 4.1E-65 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 SUPERFAMILY SSF117892 54 187 6.54E-45 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PANTHER PTHR10264:SF60 11 248 3.1E-119 T 23-04-2016 NIAKO_RS31155 d32c007527eb8356b725b9d75a4becff 255 PANTHER PTHR10264 11 248 3.1E-119 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 Gene3D G3DSA:3.40.50.1950 3 183 2.5E-64 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 PANTHER PTHR14359:SF20 1 396 1.0E-161 T 23-04-2016 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 PANTHER PTHR14359 1 396 1.0E-161 T 23-04-2016 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 Gene3D G3DSA:3.40.50.10300 184 396 5.1E-77 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 SUPERFAMILY SSF52507 1 176 1.44E-57 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 Pfam PF02441 Flavoprotein 5 131 3.6E-38 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 183 367 9.6E-66 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 392 1.1E-125 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 NIAKO_RS25105 6f9f487a35489ac11e98050db7959b28 398 SUPERFAMILY SSF102645 181 396 8.24E-72 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NIAKO_RS21770 224d0e137947039a291a135085673019 501 PANTHER PTHR10196 1 498 2.5E-183 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 SUPERFAMILY SSF53067 247 488 1.08E-55 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 SUPERFAMILY SSF53067 1 244 7.64E-61 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 129 141 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS21770 224d0e137947039a291a135085673019 501 Gene3D G3DSA:3.30.420.40 247 488 1.4E-48 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 244 4.1E-59 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS21770 224d0e137947039a291a135085673019 501 PIRSF PIRSF000538 1 495 1.2E-130 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS21770 224d0e137947039a291a135085673019 501 PANTHER PTHR10196:SF41 1 498 2.5E-183 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 Gene3D G3DSA:3.30.420.40 1 244 5.2E-59 T 23-04-2016 NIAKO_RS21770 224d0e137947039a291a135085673019 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS21770 224d0e137947039a291a135085673019 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 443 1.2E-31 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 PANTHER PTHR13794 1 359 1.1E-103 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 Gene3D G3DSA:3.30.390.10 1 124 7.2E-30 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 Pfam PF13378 Enolase C-terminal domain-like 143 356 1.6E-51 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 SUPERFAMILY SSF54826 1 122 6.37E-28 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 SMART SM00922 140 236 1.3E-18 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 Gene3D G3DSA:3.20.20.120 125 351 7.9E-72 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 122 3.6E-19 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 PANTHER PTHR13794:SF55 1 359 1.1E-103 T 23-04-2016 NIAKO_RS22855 ac4535b8bed2a1cd88f94319237b94fe 366 SUPERFAMILY SSF51604 110 360 4.32E-68 T 23-04-2016 IPR029065 Enolase C-terminal domain-like NIAKO_RS36425 75aa6673122d22cc4033cb4018c1f0d6 367 Pfam PF05117 Family of unknown function (DUF695) 240 356 2.1E-14 T 23-04-2016 IPR016097 Domain of unknown function DUF695 NIAKO_RS37475 e7f4087cc9276118572b5965fac80c04 319 SUPERFAMILY SSF103473 31 137 6.41E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 Gene3D G3DSA:3.60.21.10 122 375 8.5E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 39 115 1.9E-23 T 23-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 333 480 9.1E-50 T 23-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 PANTHER PTHR22953 109 328 6.9E-20 T 23-04-2016 NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 PANTHER PTHR22953:SF27 109 328 6.9E-20 T 23-04-2016 NIAKO_RS13895 2c2c939be29f61b2734bee2a801a9eb9 487 SUPERFAMILY SSF56300 125 374 4.18E-32 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS36935 3eb4db230aa303a0876b99157fd7286d 261 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 121 233 2.1E-6 T 23-04-2016 IPR018728 Domain of unknown function DUF2268 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 SUPERFAMILY SSF51395 449 1217 3.34E-271 T 23-04-2016 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 PANTHER PTHR11938 6 1499 0.0 T 23-04-2016 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 PANTHER PTHR11938:SF1 6 1499 0.0 T 23-04-2016 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Gene3D G3DSA:3.20.20.70 451 802 6.2E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Gene3D G3DSA:2.160.20.60 1238 1505 1.3E-109 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Pfam PF01493 GXGXG motif 1263 1449 3.2E-88 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Pfam PF04898 Glutamate synthase central domain 469 753 4.4E-116 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 SUPERFAMILY SSF56235 17 443 2.14E-152 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Gene3D G3DSA:3.60.20.10 17 450 1.6E-181 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Pfam PF01645 Conserved region in glutamate synthase 815 1183 6.4E-156 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 SUPERFAMILY SSF69336 1232 1495 8.63E-98 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Gene3D G3DSA:3.20.20.70 807 1222 5.1E-186 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS00520 70a9bff613ca249d436382ade551c6ba 1507 Pfam PF00310 Glutamine amidotransferases class-II 17 440 3.7E-177 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain NIAKO_RS32490 3c49c1a848ad059a3513bfb12dc11a37 233 Pfam PF06439 Domain of Unknown Function (DUF1080) 34 230 2.0E-47 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS06925 a921ec9d2e638d2be2cb3927a7a0fc5d 708 SUPERFAMILY SSF56935 15 687 1.36E-45 T 23-04-2016 NIAKO_RS06925 a921ec9d2e638d2be2cb3927a7a0fc5d 708 Gene3D G3DSA:2.40.170.20 123 686 3.0E-15 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06925 a921ec9d2e638d2be2cb3927a7a0fc5d 708 Gene3D G3DSA:2.170.130.10 13 122 4.2E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06925 a921ec9d2e638d2be2cb3927a7a0fc5d 708 Pfam PF14905 Outer membrane protein beta-barrel family 286 685 8.5E-74 T 23-04-2016 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 PANTHER PTHR10342:SF199 1 207 1.2E-59 T 23-04-2016 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 Pfam PF00884 Sulfatase 2 92 6.1E-21 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 Gene3D G3DSA:3.30.1120.10 131 193 4.2E-17 T 23-04-2016 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 Gene3D G3DSA:3.40.720.10 1 130 5.3E-37 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 PANTHER PTHR10342 1 207 1.2E-59 T 23-04-2016 NIAKO_RS09375 1970938140cda4552392d35443dec7df 211 SUPERFAMILY SSF53649 1 184 6.83E-50 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 SUPERFAMILY SSF52540 159 322 1.37E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 SUPERFAMILY SSF52374 4 159 3.1E-13 T 23-04-2016 NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 PANTHER PTHR37512 1 324 1.1E-39 T 23-04-2016 NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 Gene3D G3DSA:3.40.50.620 2 165 1.8E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 37 4.9E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 Gene3D G3DSA:3.40.50.300 166 317 5.6E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01410 af8c82d544529e5e9282edee8d35c132 331 Pfam PF13521 AAA domain 159 312 1.2E-26 T 23-04-2016 NIAKO_RS12585 9bd8e5ab46077bfe737f653f681d2abf 211 PANTHER PTHR37938 5 202 6.7E-15 T 23-04-2016 NIAKO_RS12585 9bd8e5ab46077bfe737f653f681d2abf 211 Pfam PF03703 Bacterial PH domain 64 136 6.3E-9 T 23-04-2016 IPR005182 Domain of unknown function DUF304 NIAKO_RS12585 9bd8e5ab46077bfe737f653f681d2abf 211 PANTHER PTHR37938:SF1 5 202 6.7E-15 T 23-04-2016 NIAKO_RS12585 9bd8e5ab46077bfe737f653f681d2abf 211 Pfam PF09851 Short C-terminal domain 184 210 1.1E-7 T 23-04-2016 IPR018649 SHOCT domain NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 228 2.1E-50 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 Gene3D G3DSA:3.40.50.10410 76 177 2.7E-29 T 23-04-2016 IPR023215 Nitrophenylphosphatase-like domain NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 7.1E-33 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 PANTHER PTHR19288 4 263 3.1E-118 T 23-04-2016 NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 SUPERFAMILY SSF56784 4 253 9.15E-70 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 Gene3D G3DSA:3.40.50.1000 4 75 2.5E-47 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 Gene3D G3DSA:3.40.50.1000 178 254 2.5E-47 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 PANTHER PTHR19288:SF40 4 263 3.1E-118 T 23-04-2016 NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 Pfam PF13242 HAD-hyrolase-like 179 252 8.5E-21 T 23-04-2016 NIAKO_RS17385 470831c2fb46687121b3f89ff19d64f0 273 PIRSF PIRSF000915 3 257 2.5E-56 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA NIAKO_RS16100 af73f830df12c57e00197a894364c42f 160 Pfam PF12975 Domain of unknown function (DUF3859) 20 159 5.7E-33 T 23-04-2016 IPR024331 Domain of unknown function DUF3859 NIAKO_RS19810 848afef3ec9c87e8e0e67be38ca0423c 429 SUPERFAMILY SSF50974 95 329 1.2E-8 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal NIAKO_RS19810 848afef3ec9c87e8e0e67be38ca0423c 429 Gene3D G3DSA:2.130.10.10 170 380 4.6E-10 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19810 848afef3ec9c87e8e0e67be38ca0423c 429 Gene3D G3DSA:2.130.10.10 93 160 1.9E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19810 848afef3ec9c87e8e0e67be38ca0423c 429 Pfam PF10282 Lactonase, 7-bladed beta-propeller 94 164 7.8E-5 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NIAKO_RS28925 1990d671d5d04346ff86de6df37e1795 319 PANTHER PTHR16222 6 317 6.8E-53 T 23-04-2016 NIAKO_RS28925 1990d671d5d04346ff86de6df37e1795 319 PANTHER PTHR16222:SF12 6 317 6.8E-53 T 23-04-2016 NIAKO_RS28925 1990d671d5d04346ff86de6df37e1795 319 SUPERFAMILY SSF101478 7 315 5.89E-62 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS28925 1990d671d5d04346ff86de6df37e1795 319 Pfam PF03747 ADP-ribosylglycohydrolase 8 294 4.2E-60 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 SUPERFAMILY SSF55347 178 265 1.41E-6 T 23-04-2016 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 28 142 1.4E-14 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 SUPERFAMILY SSF51735 26 157 4.73E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 PANTHER PTHR22604 26 275 6.0E-26 T 23-04-2016 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 PANTHER PTHR22604 293 341 6.0E-26 T 23-04-2016 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 Gene3D G3DSA:3.30.360.10 167 342 2.0E-14 T 23-04-2016 NIAKO_RS24280 ce4b6cd352257487be67aefda693446c 346 Gene3D G3DSA:3.40.50.720 26 149 1.1E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 PIRSF PIRSF000883 1 257 8.7E-55 T 23-04-2016 IPR011152 Phosphoesterase MJ0912 NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 SUPERFAMILY SSF56300 1 256 1.02E-49 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 PANTHER PTHR11124 1 72 9.8E-46 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 PANTHER PTHR11124 105 256 9.8E-46 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 Gene3D G3DSA:3.60.21.10 1 257 5.2E-75 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 PANTHER PTHR11124:SF2 1 72 9.8E-46 T 23-04-2016 NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 PANTHER PTHR11124:SF2 105 256 9.8E-46 T 23-04-2016 NIAKO_RS20045 3bbb9826fdcf11fd46daed86cd057cf6 257 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 213 1.8E-28 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 PANTHER PTHR22925:SF34 27 509 3.6E-109 T 23-04-2016 NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 Gene3D G3DSA:2.115.10.20 33 310 2.6E-58 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 Pfam PF04616 Glycosyl hydrolases family 43 34 294 3.5E-46 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 PANTHER PTHR22925 27 509 3.6E-109 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 Gene3D G3DSA:2.60.120.200 320 514 1.1E-40 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 SUPERFAMILY SSF49899 320 512 3.96E-40 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS13985 03f397a01e4bb774f5dddce5cb446bdf 517 SUPERFAMILY SSF75005 34 309 2.3E-65 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS16430 bbe8036279f869d345d70d139203d764 166 Pfam PF09406 Protein of unknown function (DUF2004) 61 166 8.7E-24 T 23-04-2016 IPR018546 Protein of unknown function DUF2004 NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PANTHER PTHR24321:SF6 3 238 1.5E-22 T 23-04-2016 NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.2E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 2.2E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 2.2E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.2E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 PANTHER PTHR24321 3 238 1.5E-22 T 23-04-2016 NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 Gene3D G3DSA:3.40.50.720 3 237 4.2E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 237 6.9E-34 T 23-04-2016 NIAKO_RS08035 803c1cf47b5474c326d7358713bd97a1 238 SUPERFAMILY SSF51735 6 237 6.41E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23940 02849475112f5417b301f6741914b878 271 Gene3D G3DSA:2.70.70.10 114 234 1.5E-25 T 23-04-2016 NIAKO_RS23940 02849475112f5417b301f6741914b878 271 Pfam PF01551 Peptidase family M23 139 234 8.1E-21 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS23940 02849475112f5417b301f6741914b878 271 PANTHER PTHR21666 140 233 3.4E-17 T 23-04-2016 NIAKO_RS23940 02849475112f5417b301f6741914b878 271 SUPERFAMILY SSF51261 116 234 3.92E-25 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SMART SM00089 953 1030 2.5E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SMART SM00089 1034 1115 1.5E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SMART SM00089 779 857 4.3E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SMART SM00089 875 951 0.24 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SUPERFAMILY SSF49299 773 857 3.01E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Pfam PF00801 PKD domain 1043 1099 1.8E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Pfam PF00801 PKD domain 895 933 2.7E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Pfam PF00801 PKD domain 959 1013 8.6E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Pfam PF00801 PKD domain 790 842 3.3E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 PANTHER PTHR35580 77 399 6.3E-20 T 23-04-2016 NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 PANTHER PTHR35580 419 638 6.3E-20 T 23-04-2016 NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1119 1205 1.5E-10 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SUPERFAMILY SSF49299 1025 1110 1.7E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SUPERFAMILY SSF49299 864 936 9.81E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 SUPERFAMILY SSF49299 947 1020 1.83E-15 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Pfam PF13585 C-terminal domain of CHU protein family 1119 1203 6.7E-14 T 23-04-2016 NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Gene3D G3DSA:2.60.40.670 774 858 2.9E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Gene3D G3DSA:2.60.40.670 958 1031 8.1E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Gene3D G3DSA:2.60.40.670 863 940 6.5E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 Gene3D G3DSA:2.60.40.670 1032 1110 4.9E-16 T 23-04-2016 IPR000601 PKD domain NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 PANTHER PTHR35580:SF1 77 399 6.3E-20 T 23-04-2016 NIAKO_RS35925 93d404e3732ee3a6d8e8f31f6d8c51cf 1205 PANTHER PTHR35580:SF1 419 638 6.3E-20 T 23-04-2016 NIAKO_RS29165 59019c280ed327b071684fdf345ee8ed 169 Gene3D G3DSA:3.40.630.30 5 163 3.2E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS29165 59019c280ed327b071684fdf345ee8ed 169 Pfam PF00583 Acetyltransferase (GNAT) family 60 148 1.1E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS29165 59019c280ed327b071684fdf345ee8ed 169 PANTHER PTHR23091 4 151 2.5E-12 T 23-04-2016 NIAKO_RS29165 59019c280ed327b071684fdf345ee8ed 169 SUPERFAMILY SSF55729 10 165 3.43E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS30420 4e29f36a24b6c5d55d7bc65a89219999 267 Gene3D G3DSA:3.20.20.370 7 257 8.3E-25 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS30420 4e29f36a24b6c5d55d7bc65a89219999 267 SUPERFAMILY SSF88713 33 261 5.56E-26 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS30420 4e29f36a24b6c5d55d7bc65a89219999 267 Pfam PF01522 Polysaccharide deacetylase 31 150 4.7E-16 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS07980 ef9ad792858bcef4f15e7677a8c8203a 188 Pfam PF04286 Protein of unknown function (DUF445) 129 184 8.6E-9 T 23-04-2016 IPR007383 Protein of unknown function DUF445 NIAKO_RS03185 bf3f5494ac9992aedc8c357a4d5588c3 65 Gene3D G3DSA:2.30.30.100 3 52 1.5E-4 T 23-04-2016 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 Pfam PF17148 Domain of unknown function (DUF5117) 127 330 2.2E-59 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 Pfam PF16313 Met-zincin 464 771 2.2E-121 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 Gene3D G3DSA:3.40.390.10 322 558 6.2E-11 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 SUPERFAMILY SSF55486 273 557 5.31E-20 T 23-04-2016 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 Pfam PF17162 Domain of unknown function (DUF5118) 63 112 6.0E-22 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS11640 fc9f94c5462e80666800f9969a1c2e36 855 PANTHER PTHR38478 11 848 2.9E-128 T 23-04-2016 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 2 274 4.8E-105 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 SUPERFAMILY SSF53328 79 275 5.1E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 Gene3D G3DSA:3.30.70.260 2 64 2.9E-12 T 23-04-2016 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PIRSF PIRSF036480 1 275 6.4E-104 T 23-04-2016 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 274 40.359 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PANTHER PTHR10520 2 268 4.2E-117 T 23-04-2016 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 Gene3D G3DSA:3.40.50.170 79 274 1.5E-56 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 Pfam PF01842 ACT domain 2 64 5.9E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 Pfam PF00551 Formyl transferase 79 256 1.9E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 SUPERFAMILY SSF55021 2 66 1.03E-10 T 23-04-2016 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 102 129 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 226 248 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 3 29 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 35 47 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 80 102 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 248 273 1.1E-50 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS12895 7620aebe75f9d5945daf20d1dea58a96 275 PANTHER PTHR10520:SF7 2 268 4.2E-117 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 NIAKO_RS23805 bdb9f101b8c2150a469fe1ccf49620f1 297 Pfam PF13460 NAD(P)H-binding 8 115 7.5E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23805 bdb9f101b8c2150a469fe1ccf49620f1 297 PANTHER PTHR14194 3 297 2.6E-20 T 23-04-2016 NIAKO_RS23805 bdb9f101b8c2150a469fe1ccf49620f1 297 SUPERFAMILY SSF51735 1 278 2.03E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23805 bdb9f101b8c2150a469fe1ccf49620f1 297 Gene3D G3DSA:3.40.50.720 1 203 7.8E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 SUPERFAMILY SSF56935 113 392 1.51E-19 T 23-04-2016 NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 236 3.2E-6 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 Gene3D G3DSA:2.60.40.1120 28 118 1.2E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 PANTHER PTHR30069 26 361 4.4E-35 T 23-04-2016 NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 Gene3D G3DSA:2.170.130.10 119 236 9.3E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 PANTHER PTHR30069:SF1 26 361 4.4E-35 T 23-04-2016 NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 SUPERFAMILY SSF49464 27 113 1.04E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS22565 87d08f6d01f5151e9ad577f96e09dc4e 399 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 105 4.0E-16 T 23-04-2016 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 SUPERFAMILY SSF48498 88 188 1.04E-16 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 Pfam PF13305 WHG domain 91 179 2.0E-20 T 23-04-2016 IPR025996 WHG domain NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 PANTHER PTHR30055:SF52 1 186 1.9E-32 T 23-04-2016 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 SUPERFAMILY SSF46689 6 77 1.2E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 PANTHER PTHR30055 1 186 1.9E-32 T 23-04-2016 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 3.2E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS27160 eaa11efab172a0b0f38241a3e2baebeb 211 Gene3D G3DSA:1.10.357.10 5 183 4.6E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS16920 5b84963df45f71bc6b9f7e64de1c28e3 154 SUPERFAMILY SSF55961 9 152 2.42E-36 T 23-04-2016 NIAKO_RS16920 5b84963df45f71bc6b9f7e64de1c28e3 154 PANTHER PTHR36929 6 154 2.8E-17 T 23-04-2016 NIAKO_RS16920 5b84963df45f71bc6b9f7e64de1c28e3 154 PANTHER PTHR36929:SF1 6 154 2.8E-17 T 23-04-2016 NIAKO_RS16920 5b84963df45f71bc6b9f7e64de1c28e3 154 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 24 150 9.8E-18 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS16920 5b84963df45f71bc6b9f7e64de1c28e3 154 Gene3D G3DSA:3.30.530.20 4 153 5.7E-31 T 23-04-2016 IPR023393 START-like domain NIAKO_RS18845 ddd40e32f079d0a935ac6fef3de74418 179 SUPERFAMILY SSF69118 5 175 4.42E-33 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS18845 ddd40e32f079d0a935ac6fef3de74418 179 Gene3D G3DSA:1.20.1290.10 57 175 1.2E-17 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS18845 ddd40e32f079d0a935ac6fef3de74418 179 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 106 3.4E-8 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS18845 ddd40e32f079d0a935ac6fef3de74418 179 PANTHER PTHR35446 1 170 3.3E-14 T 23-04-2016 NIAKO_RS18845 ddd40e32f079d0a935ac6fef3de74418 179 Gene3D G3DSA:1.20.5.810 11 51 2.0E-6 T 23-04-2016 NIAKO_RS29830 3be975efb1e8cdb21a68048e192a6e9b 186 Pfam PF13835 Domain of unknown function (DUF4194) 15 180 1.1E-39 T 23-04-2016 IPR025449 Protein of unknown function DUF4194 NIAKO_RS02110 0c34e92d69298259bf4483e8d0915365 417 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 166 394 2.6E-60 T 23-04-2016 IPR019219 Protein of unknown function DUF2130 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 PANTHER PTHR11532:SF57 510 1075 3.0E-221 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 PANTHER PTHR11532:SF57 5 370 3.0E-221 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF56935 479 820 2.43E-76 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF56935 900 944 2.43E-76 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF56935 317 404 2.43E-76 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF56935 110 253 2.43E-76 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF56935 979 1077 2.43E-76 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 PANTHER PTHR11532 510 1075 3.0E-221 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 PANTHER PTHR11532 5 370 3.0E-221 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 SUPERFAMILY SSF49464 30 112 1.44E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 229 3.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1077 1.4E-227 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Gene3D G3DSA:2.60.40.1120 31 122 1.3E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Pfam PF13715 CarboxypepD_reg-like domain 31 114 2.4E-12 T 23-04-2016 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Gene3D G3DSA:2.170.130.10 123 238 1.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 1.6E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Gene3D G3DSA:2.40.170.20 459 818 1.6E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS25705 d8478ab46bd34b42e59928b8a6fbe9b8 1077 Gene3D G3DSA:2.40.170.20 325 394 1.6E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12905 260a35b00888133a9649f5cf3d5cd620 347 PANTHER PTHR30273 1 345 3.9E-45 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS12905 260a35b00888133a9649f5cf3d5cd620 347 Pfam PF16344 Domain of unknown function (DUF4974) 237 338 2.0E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS12905 260a35b00888133a9649f5cf3d5cd620 347 PANTHER PTHR30273:SF2 1 345 3.9E-45 T 23-04-2016 NIAKO_RS12905 260a35b00888133a9649f5cf3d5cd620 347 Pfam PF04773 FecR protein 130 214 1.7E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS12905 260a35b00888133a9649f5cf3d5cd620 347 PIRSF PIRSF018266 2 343 3.4E-44 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 SUPERFAMILY SSF53613 1 287 7.33E-55 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 Gene3D G3DSA:3.40.1190.20 1 295 1.2E-55 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 PANTHER PTHR10584 3 307 6.6E-58 T 23-04-2016 NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 Pfam PF00294 pfkB family carbohydrate kinase 5 280 2.8E-30 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 231 244 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NIAKO_RS29790 0f6d0bb7b4ca4f638b732e63cc73df02 307 PANTHER PTHR10584:SF179 3 307 6.6E-58 T 23-04-2016 NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 Pfam PF12904 Putative collagen-binding domain of a collagenase 369 460 1.6E-35 T 23-04-2016 IPR024749 Putative collagen-binding domain NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 PANTHER PTHR37836 30 450 1.1E-93 T 23-04-2016 NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 Gene3D G3DSA:3.20.20.80 27 226 1.7E-10 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 PANTHER PTHR37836:SF2 30 450 1.1E-93 T 23-04-2016 NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 Pfam PF13204 Protein of unknown function (DUF4038) 32 366 1.6E-106 T 23-04-2016 IPR025277 Putative glycohydrolase domain DUF4038 NIAKO_RS17750 4ce90bf627bae41cf91080747fbbe0a8 461 SUPERFAMILY SSF51445 30 340 4.59E-16 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PANTHER PTHR11592 39 194 1.6E-41 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 Pfam PF00255 Glutathione peroxidase 41 147 2.6E-28 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PANTHER PTHR11592:SF40 39 194 1.6E-41 T 23-04-2016 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PRINTS PR01011 Glutathione peroxidase family signature 59 76 1.5E-13 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PRINTS PR01011 Glutathione peroxidase family signature 160 169 1.5E-13 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PRINTS PR01011 Glutathione peroxidase family signature 93 109 1.5E-13 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 ProSitePatterns PS00460 Glutathione peroxidases active site. 61 76 - T 23-04-2016 IPR029759 Glutathione peroxidase active site NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 PIRSF PIRSF000303 15 197 4.4E-48 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 Gene3D G3DSA:3.40.30.10 39 190 6.1E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS32535 90f5d3ffac03a722ea11238f36fa406c 198 SUPERFAMILY SSF52833 40 187 1.64E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS32975 b28023df10fe1faad376662b26384d93 274 Pfam PF04909 Amidohydrolase 3 274 2.0E-43 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS32975 b28023df10fe1faad376662b26384d93 274 Gene3D G3DSA:3.20.20.140 2 274 3.1E-69 T 23-04-2016 NIAKO_RS32975 b28023df10fe1faad376662b26384d93 274 PANTHER PTHR21240:SF1 2 274 4.6E-62 T 23-04-2016 NIAKO_RS32975 b28023df10fe1faad376662b26384d93 274 PANTHER PTHR21240 2 274 4.6E-62 T 23-04-2016 NIAKO_RS32975 b28023df10fe1faad376662b26384d93 274 SUPERFAMILY SSF51556 3 274 1.42E-71 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 Pfam PF03150 Di-haem cytochrome c peroxidase 61 210 8.9E-48 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 Pfam PF00034 Cytochrome c 219 332 3.5E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 Gene3D G3DSA:1.10.760.10 203 340 5.1E-36 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 SUPERFAMILY SSF46626 198 346 9.43E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 PANTHER PTHR30600 56 342 3.6E-91 T 23-04-2016 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 SUPERFAMILY SSF46626 45 199 9.89E-47 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 Gene3D G3DSA:1.10.760.10 54 202 4.6E-47 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 PANTHER PTHR30600:SF7 56 342 3.6E-91 T 23-04-2016 NIAKO_RS16200 60cf721426549ac27851c9180b4aa919 350 PIRSF PIRSF000294 15 346 5.6E-106 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 Gene3D G3DSA:3.40.800.20 8 297 9.8E-63 T 23-04-2016 IPR023801 Histone deacetylase domain NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 SUPERFAMILY SSF52768 9 295 5.28E-79 T 23-04-2016 NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 PANTHER PTHR10625:SF131 16 294 5.4E-103 T 23-04-2016 NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 Pfam PF00850 Histone deacetylase domain 36 293 3.5E-48 T 23-04-2016 IPR023801 Histone deacetylase domain NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 7.8E-12 T 23-04-2016 IPR000286 Histone deacetylase superfamily NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 7.8E-12 T 23-04-2016 IPR000286 Histone deacetylase superfamily NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 7.8E-12 T 23-04-2016 IPR000286 Histone deacetylase superfamily NIAKO_RS25040 410f0056d9662601c8e4d6943fad54c2 307 PANTHER PTHR10625 16 294 5.4E-103 T 23-04-2016 IPR000286 Histone deacetylase superfamily NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 PANTHER PTHR22925:SF11 39 480 9.4E-34 T 23-04-2016 NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 SUPERFAMILY SSF49785 531 653 2.21E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 SMART SM00606 524 656 0.0028 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 Gene3D G3DSA:2.60.120.260 528 655 2.2E-17 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 Gene3D G3DSA:2.60.120.200 345 523 5.1E-23 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 SUPERFAMILY SSF49899 345 525 3.09E-26 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 PANTHER PTHR22925 39 480 9.4E-34 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 Pfam PF04616 Glycosyl hydrolases family 43 41 315 4.9E-42 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 Gene3D G3DSA:2.115.10.20 40 330 7.9E-47 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 SUPERFAMILY SSF75005 40 323 1.7E-50 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS11995 ca602cf0efc62bdbaef807cdb8522fb8 656 Pfam PF03422 Carbohydrate binding module (family 6) 533 656 1.1E-14 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS05705 8664da90e5510428b755c4068e6e8054 284 SUPERFAMILY SSF53474 51 281 2.22E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS05705 8664da90e5510428b755c4068e6e8054 284 PANTHER PTHR22946:SF0 17 284 2.4E-62 T 23-04-2016 NIAKO_RS05705 8664da90e5510428b755c4068e6e8054 284 PANTHER PTHR22946 17 284 2.4E-62 T 23-04-2016 NIAKO_RS05705 8664da90e5510428b755c4068e6e8054 284 Pfam PF01738 Dienelactone hydrolase family 60 282 7.0E-50 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NIAKO_RS05705 8664da90e5510428b755c4068e6e8054 284 Gene3D G3DSA:3.40.50.1820 49 281 1.6E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS17825 b3506cc3b39489fd0000ad12d1aa3a76 577 SUPERFAMILY SSF48452 19 577 9.61E-96 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17825 b3506cc3b39489fd0000ad12d1aa3a76 577 Pfam PF07980 SusD family 294 577 3.8E-31 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS17825 b3506cc3b39489fd0000ad12d1aa3a76 577 Pfam PF14322 Starch-binding associating with outer membrane 65 221 3.6E-22 T 23-04-2016 NIAKO_RS17825 b3506cc3b39489fd0000ad12d1aa3a76 577 Gene3D G3DSA:1.25.40.10 429 516 2.9E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17825 b3506cc3b39489fd0000ad12d1aa3a76 577 Gene3D G3DSA:1.25.40.10 202 331 2.9E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26640 4dc385e65d12487f716ea719d7eee9c8 86 Pfam PF12728 Helix-turn-helix domain 36 83 4.1E-8 T 23-04-2016 NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 22 310 9.5E-161 T 23-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 Gene3D G3DSA:1.20.1260.10 32 287 5.0E-102 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 PANTHER PTHR30458 1 328 2.6E-162 T 23-04-2016 NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 SUPERFAMILY SSF47240 42 285 1.04E-82 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 PANTHER PTHR30458:SF0 1 328 2.6E-162 T 23-04-2016 NIAKO_RS30550 41bb129a7a04e097b637f91fe7628f96 331 Pfam PF05138 Phenylacetic acid catabolic protein 32 306 2.6E-99 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 PANTHER PTHR30173 7 383 3.4E-79 T 23-04-2016 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 PANTHER PTHR30173:SF15 7 383 3.4E-79 T 23-04-2016 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 Gene3D G3DSA:1.10.10.10 113 170 3.7E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 SUPERFAMILY SSF88946 9 80 7.85E-8 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 Gene3D G3DSA:1.10.1740.10 10 77 2.9E-5 T 23-04-2016 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 SUPERFAMILY SSF88659 111 170 1.87E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS09745 e404f69f7a38d02a8674c755d32094e9 412 Pfam PF04542 Sigma-70 region 2 15 78 1.9E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 PIRSF PIRSF006113 1 118 2.0E-43 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 SUPERFAMILY SSF55620 2 117 2.0E-41 T 23-04-2016 NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 3.2E-32 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 PANTHER PTHR12589 1 118 5.2E-45 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 Gene3D G3DSA:3.30.479.10 2 118 6.7E-41 T 23-04-2016 NIAKO_RS04800 87282c48511156f0f2ff33312d46c921 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 118 1.6E-37 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS29405 a192cf5d795dbddcfcc3b86611a5c421 205 Gene3D G3DSA:2.40.160.20 40 156 6.1E-8 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS29405 a192cf5d795dbddcfcc3b86611a5c421 205 SUPERFAMILY SSF56925 27 177 2.88E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS29405 a192cf5d795dbddcfcc3b86611a5c421 205 Pfam PF13505 Outer membrane protein beta-barrel domain 8 179 1.8E-8 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS31915 92cb5df1645d23d5583b71100b69f486 236 PANTHER PTHR23417 29 209 7.9E-36 T 23-04-2016 NIAKO_RS31915 92cb5df1645d23d5583b71100b69f486 236 PANTHER PTHR23417:SF14 29 209 7.9E-36 T 23-04-2016 NIAKO_RS31915 92cb5df1645d23d5583b71100b69f486 236 SUPERFAMILY SSF53335 32 177 2.43E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS31915 92cb5df1645d23d5583b71100b69f486 236 Pfam PF02390 Putative methyltransferase 36 196 1.1E-26 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 NIAKO_RS31915 92cb5df1645d23d5583b71100b69f486 236 Gene3D G3DSA:3.40.50.150 36 153 9.3E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 SUPERFAMILY SSF51735 4 249 2.23E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.2E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 Gene3D G3DSA:3.40.50.720 1 250 8.3E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PANTHER PTHR24321:SF6 1 250 5.5E-42 T 23-04-2016 NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 PANTHER PTHR24321 1 250 5.5E-42 T 23-04-2016 NIAKO_RS31920 c948e47393ed60bfcc3cffd41b0e68be 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 7.1E-59 T 23-04-2016 NIAKO_RS31975 c7a55e6f78ac274a174d46b515f44106 135 Gene3D G3DSA:3.30.70.900 25 132 4.1E-39 T 23-04-2016 NIAKO_RS31975 c7a55e6f78ac274a174d46b515f44106 135 Pfam PF07876 Stress responsive A/B Barrel Domain 38 131 3.3E-14 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel NIAKO_RS31975 c7a55e6f78ac274a174d46b515f44106 135 SMART SM00886 36 133 1.5E-19 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel NIAKO_RS31975 c7a55e6f78ac274a174d46b515f44106 135 SUPERFAMILY SSF54909 34 132 6.44E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 Gene3D G3DSA:2.60.120.280 28 181 1.0E-26 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 SUPERFAMILY SSF51215 36 180 4.58E-24 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 Gene3D G3DSA:1.10.10.60 192 249 1.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PANTHER PTHR11019 56 162 1.0E-37 T 23-04-2016 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PANTHER PTHR11019 181 301 1.0E-37 T 23-04-2016 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PANTHER PTHR11019:SF65 56 162 1.0E-37 T 23-04-2016 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PANTHER PTHR11019:SF65 181 301 1.0E-37 T 23-04-2016 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 SUPERFAMILY SSF46689 251 299 1.84E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 Pfam PF12833 Helix-turn-helix domain 221 298 2.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 SMART SM00342 214 297 4.5E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 Pfam PF02311 AraC-like ligand binding domain 53 159 6.8E-15 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 7.7E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 7.7E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 SUPERFAMILY SSF46689 198 248 6.27E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS17625 8fbed30c9b9a860e1dfa5415fd5cf3f3 302 Gene3D G3DSA:1.10.10.60 250 300 3.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 69 5.2E-5 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Gene3D G3DSA:1.10.150.120 82 163 2.1E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 SUPERFAMILY SSF54292 2 85 3.88E-19 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Gene3D G3DSA:3.30.465.10 234 347 6.6E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 358 457 1.1E-22 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 SMART SM01092 356 458 5.5E-19 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 SUPERFAMILY SSF56176 200 347 8.72E-32 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 PIRSF PIRSF036557 1 464 1.0E-106 T 23-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 SUPERFAMILY SSF55447 357 461 1.57E-23 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Gene3D G3DSA:3.30.390.50 356 462 5.9E-27 T 23-04-2016 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 202 346 4.9E-29 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Gene3D G3DSA:3.10.20.30 2 81 6.0E-25 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 Pfam PF01799 [2Fe-2S] binding domain 80 151 1.1E-22 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 PANTHER PTHR11908 2 462 4.6E-92 T 23-04-2016 NIAKO_RS02225 d6cb499df6cc5ba121749c667ab48f61 464 SUPERFAMILY SSF47741 80 179 3.14E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 SUPERFAMILY SSF88946 4 101 1.35E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 SUPERFAMILY SSF88659 96 176 1.29E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 Gene3D G3DSA:1.10.1740.10 4 103 6.3E-23 T 23-04-2016 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 Pfam PF08281 Sigma-70, region 4 117 169 2.3E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 PANTHER PTHR30173 1 176 3.0E-37 T 23-04-2016 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 172 4.0E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 Pfam PF04542 Sigma-70 region 2 23 90 2.4E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS13735 47ce85d4fbef88ddf25554a9db924dd0 187 Gene3D G3DSA:1.10.10.10 113 175 4.3E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 Gene3D G3DSA:1.10.1740.10 5 76 1.5E-18 T 23-04-2016 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 Pfam PF08281 Sigma-70, region 4 109 159 1.3E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 SUPERFAMILY SSF88659 102 163 5.67E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 SUPERFAMILY SSF88946 5 86 1.29E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 Pfam PF04542 Sigma-70 region 2 14 74 8.2E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 Gene3D G3DSA:1.10.10.10 103 165 7.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 162 1.2E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS33415 b642e3c69b37ae393ade8fd160dc7711 166 PANTHER PTHR30173 5 166 8.4E-36 T 23-04-2016 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 Gene3D G3DSA:3.90.1150.10 319 420 6.7E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 Gene3D G3DSA:3.90.1150.10 3 60 6.7E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 PANTHER PTHR11986:SF8 3 422 9.1E-164 T 23-04-2016 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 PANTHER PTHR11986 3 422 9.1E-164 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 Pfam PF00202 Aminotransferase class-III 18 418 2.3E-100 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 Gene3D G3DSA:3.40.640.10 61 314 1.1E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 SUPERFAMILY SSF53383 10 418 1.84E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS04685 a01554ec695cd6d84730c90fea6adda5 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 418 1.1E-153 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 NIAKO_RS05430 647594e52e84c9fa4a27a4b0b5672845 208 Gene3D G3DSA:3.40.50.360 1 198 9.9E-36 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS05430 647594e52e84c9fa4a27a4b0b5672845 208 Pfam PF02525 Flavodoxin-like fold 2 191 2.1E-33 T 23-04-2016 IPR003680 Flavodoxin-like fold NIAKO_RS05430 647594e52e84c9fa4a27a4b0b5672845 208 SUPERFAMILY SSF52218 1 198 6.86E-34 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS05430 647594e52e84c9fa4a27a4b0b5672845 208 PANTHER PTHR10204 1 195 2.5E-57 T 23-04-2016 NIAKO_RS05430 647594e52e84c9fa4a27a4b0b5672845 208 PANTHER PTHR10204:SF36 1 195 2.5E-57 T 23-04-2016 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.8E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.9E-59 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 PANTHER PTHR11761 1 122 6.1E-72 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 SUPERFAMILY SSF50193 1 122 4.71E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 SMART SM01374 1 122 7.1E-85 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.446 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22950 c083133e918ff0079ed63a2f9e2788c2 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site NIAKO_RS34435 18ed3bf815a21784ca2b81ebdabe547d 390 SUPERFAMILY SSF56935 298 367 6.87E-5 T 23-04-2016 NIAKO_RS34435 18ed3bf815a21784ca2b81ebdabe547d 390 SUPERFAMILY SSF103515 134 350 5.1E-5 T 23-04-2016 IPR005546 Autotransporter beta-domain NIAKO_RS34435 18ed3bf815a21784ca2b81ebdabe547d 390 Gene3D G3DSA:2.40.160.60 309 361 1.2E-7 T 23-04-2016 NIAKO_RS34435 18ed3bf815a21784ca2b81ebdabe547d 390 Gene3D G3DSA:2.40.160.60 42 211 1.2E-7 T 23-04-2016 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 SUPERFAMILY SSF52402 494 627 1.34E-22 T 23-04-2016 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 12 432 37.466 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 210 233 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 161 182 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 376 395 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 344 361 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 316 335 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PRINTS PR00447 Natural resistance-associated macrophage protein signature 136 155 6.7E-61 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 Pfam PF00582 Universal stress protein family 494 626 1.5E-19 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 Gene3D G3DSA:3.40.50.620 491 627 1.5E-23 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 400 7.2E-118 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 PANTHER PTHR11706 1 468 7.6E-204 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS21415 6bc27aef3f81e690f01e4bba7e151ab0 628 Pfam PF01566 Natural resistance-associated macrophage protein 49 406 2.0E-131 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS30085 23ce8b6299231b84c64e4671cff9828f 246 Pfam PF13568 Outer membrane protein beta-barrel domain 40 203 1.5E-10 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 Pfam PF07980 SusD family 304 655 4.1E-44 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 SUPERFAMILY SSF48452 20 544 2.28E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 SUPERFAMILY SSF48452 623 655 2.28E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 Pfam PF14322 Starch-binding associating with outer membrane 76 239 1.6E-21 T 23-04-2016 NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 Gene3D G3DSA:1.25.40.10 421 517 4.7E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17765 d9861f9e7ba9427a4703f0164740a05e 669 Gene3D G3DSA:1.25.40.10 219 348 4.7E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 PANTHER PTHR34606 3 218 1.4E-44 T 23-04-2016 NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 Pfam PF04972 BON domain 151 215 1.6E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 Pfam PF04972 BON domain 78 146 7.8E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 Pfam PF04972 BON domain 3 69 1.5E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 SMART SM00749 83 146 78.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 SMART SM00749 154 217 0.003 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 SMART SM00749 8 71 1.3 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS11320 4039ccd1cf252922b348dd864426a2be 222 PANTHER PTHR34606:SF2 3 218 1.4E-44 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 Gene3D G3DSA:2.40.50.40 136 203 3.7E-15 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 SUPERFAMILY SSF52172 2 113 1.85E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 Gene3D G3DSA:3.40.50.2300 2 119 3.1E-30 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 Gene3D G3DSA:2.20.25.10 206 243 2.9E-8 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 Pfam PF00072 Response regulator receiver domain 4 110 1.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 PANTHER PTHR26402:SF524 1 112 8.8E-34 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 PANTHER PTHR26402 1 112 8.8E-34 T 23-04-2016 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 Pfam PF04397 LytTr DNA-binding domain 146 241 3.4E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 SMART SM00850 145 242 1.0E-27 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS28055 062e7533fa9a6dc28ca7e6df10e53af3 243 SMART SM00448 1 109 5.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 21 339 2.4E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.4E-12 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 2.4E-12 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 2.4E-12 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 2.4E-12 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 7.4E-9 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 7.4E-9 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 21 43 7.4E-9 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 SUPERFAMILY SSF51905 21 353 2.11E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 Gene3D G3DSA:3.50.50.60 17 124 1.7E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 Gene3D G3DSA:3.50.50.60 125 346 3.4E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PANTHER PTHR22912 209 346 1.3E-25 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PANTHER PTHR22912 10 155 1.3E-25 T 23-04-2016 NIAKO_RS01060 ea90c70e2f52589e977f4855de875070 450 PANTHER PTHR22912 172 193 1.3E-25 T 23-04-2016 NIAKO_RS09090 59409c4a9458c44dc9bf0131f203a109 440 PANTHER PTHR11706:SF43 10 225 9.0E-72 T 23-04-2016 NIAKO_RS09090 59409c4a9458c44dc9bf0131f203a109 440 PANTHER PTHR11706:SF43 250 440 9.0E-72 T 23-04-2016 NIAKO_RS09090 59409c4a9458c44dc9bf0131f203a109 440 PANTHER PTHR11706 10 225 9.0E-72 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS09090 59409c4a9458c44dc9bf0131f203a109 440 PANTHER PTHR11706 250 440 9.0E-72 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS09090 59409c4a9458c44dc9bf0131f203a109 440 Pfam PF01566 Natural resistance-associated macrophage protein 34 414 3.8E-76 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 18.751 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 Pfam PF00830 Ribosomal L28 family 3 61 3.8E-24 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 PANTHER PTHR13528 1 64 9.6E-27 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 SUPERFAMILY SSF143800 1 77 2.35E-27 T 23-04-2016 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 Gene3D G3DSA:2.30.170.40 2 77 3.3E-31 T 23-04-2016 NIAKO_RS12720 6ecad9b99dcd4cf92d4353c84ce118ba 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.9E-23 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS09980 467e8ae8cf6f9786a208e22dfdfea0e0 331 Gene3D G3DSA:3.40.50.970 3 322 5.0E-124 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS09980 467e8ae8cf6f9786a208e22dfdfea0e0 331 Pfam PF00676 Dehydrogenase E1 component 17 312 2.2E-90 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS09980 467e8ae8cf6f9786a208e22dfdfea0e0 331 PANTHER PTHR11516 4 320 2.6E-139 T 23-04-2016 NIAKO_RS09980 467e8ae8cf6f9786a208e22dfdfea0e0 331 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 320 1.8E-129 T 23-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NIAKO_RS09980 467e8ae8cf6f9786a208e22dfdfea0e0 331 SUPERFAMILY SSF52518 4 323 7.52E-98 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 Pfam PF13458 Periplasmic binding protein 34 359 5.4E-52 T 23-04-2016 IPR028081 Leucine-binding protein domain NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 PANTHER PTHR30483:SF6 1 364 3.5E-64 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 Gene3D G3DSA:3.40.50.2300 34 222 2.3E-45 T 23-04-2016 NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 SUPERFAMILY SSF53822 34 364 1.28E-74 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 253 271 2.7E-5 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 2.7E-5 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 2.7E-5 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NIAKO_RS06430 720a54ca90b366ca58a6a55698b5c150 365 PANTHER PTHR30483 1 364 3.5E-64 T 23-04-2016 NIAKO_RS16945 6a57c39fe76b1d3ddbbf6777dcafa578 132 PANTHER PTHR38436 5 131 9.4E-16 T 23-04-2016 NIAKO_RS16945 6a57c39fe76b1d3ddbbf6777dcafa578 132 Pfam PF07366 SnoaL-like polyketide cyclase 11 128 3.2E-24 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS16945 6a57c39fe76b1d3ddbbf6777dcafa578 132 Gene3D G3DSA:3.10.450.50 6 127 3.4E-31 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS16945 6a57c39fe76b1d3ddbbf6777dcafa578 132 SUPERFAMILY SSF54427 6 127 5.27E-28 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS03965 0406d46ef3531df42a42b87425565c42 221 Gene3D G3DSA:3.40.50.1820 19 220 9.0E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03965 0406d46ef3531df42a42b87425565c42 221 Pfam PF06057 Bacterial virulence protein (VirJ) 38 220 1.0E-42 T 23-04-2016 IPR010333 Bacterial virulence NIAKO_RS03965 0406d46ef3531df42a42b87425565c42 221 SUPERFAMILY SSF53474 19 220 1.08E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 PANTHER PTHR10887:SF140 85 633 2.0E-163 T 23-04-2016 NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 PANTHER PTHR10887:SF140 1 62 2.0E-163 T 23-04-2016 NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 Pfam PF13086 AAA domain 177 399 1.0E-57 T 23-04-2016 NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 SUPERFAMILY SSF52540 175 623 4.04E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 Gene3D G3DSA:3.40.50.300 441 604 3.7E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 Gene3D G3DSA:3.40.50.300 357 440 3.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 Gene3D G3DSA:3.40.50.300 174 288 3.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 Pfam PF13087 AAA domain 408 603 1.8E-54 T 23-04-2016 NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 PANTHER PTHR10887 85 633 2.0E-163 T 23-04-2016 NIAKO_RS17320 fd66fa8cf4dbc961cf3e5f9f99a0521a 633 PANTHER PTHR10887 1 62 2.0E-163 T 23-04-2016 NIAKO_RS33530 1aa886a2b2838f1bcb4cc5870903ff71 394 Pfam PF05569 BlaR1 peptidase M56 163 257 2.0E-12 T 23-04-2016 IPR008756 Peptidase M56 NIAKO_RS32355 eb17223998faab3b01977bdf9b44410e 162 SUPERFAMILY SSF160574 42 151 3.01E-9 T 23-04-2016 NIAKO_RS37345 5c9931742c9e7f674df3657ae9a42b88 284 Gene3D G3DSA:2.40.160.20 19 199 5.6E-9 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS37345 5c9931742c9e7f674df3657ae9a42b88 284 SUPERFAMILY SSF56925 15 199 4.71E-10 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS37345 5c9931742c9e7f674df3657ae9a42b88 284 Pfam PF13505 Outer membrane protein beta-barrel domain 6 197 5.7E-14 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 SUPERFAMILY SSF53686 33 304 1.58E-42 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 PANTHER PTHR10314:SF79 40 299 1.4E-15 T 23-04-2016 NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 38 297 1.7E-12 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 Gene3D G3DSA:3.40.50.1100 107 304 1.4E-43 T 23-04-2016 NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 PANTHER PTHR10314 40 299 1.4E-15 T 23-04-2016 NIAKO_RS21710 78ea9802ddf98e57ecfa0fa65a7edd08 313 PIRSF PIRSF006278 8 310 2.6E-62 T 23-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 Gene3D G3DSA:1.20.1600.10 30 421 7.2E-34 T 23-04-2016 NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 Pfam PF02321 Outer membrane efflux protein 35 216 4.7E-16 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 Pfam PF02321 Outer membrane efflux protein 244 420 2.8E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 SUPERFAMILY SSF56954 6 422 2.22E-48 T 23-04-2016 NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 PANTHER PTHR30203 21 425 2.9E-76 T 23-04-2016 NIAKO_RS23510 36f84e7a6220580ce2a2179b4a8d4482 426 PANTHER PTHR30203:SF4 21 425 2.9E-76 T 23-04-2016 NIAKO_RS24395 b9f0725795bdb1532c9c4924a76b4ae5 309 SUPERFAMILY SSF53474 50 214 9.51E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24395 b9f0725795bdb1532c9c4924a76b4ae5 309 SUPERFAMILY SSF53474 252 277 9.51E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24395 b9f0725795bdb1532c9c4924a76b4ae5 309 PANTHER PTHR38050 24 309 5.8E-42 T 23-04-2016 NIAKO_RS24395 b9f0725795bdb1532c9c4924a76b4ae5 309 Gene3D G3DSA:3.40.50.1820 41 307 7.6E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24395 b9f0725795bdb1532c9c4924a76b4ae5 309 Pfam PF10503 Esterase PHB depolymerase 48 184 1.7E-10 T 23-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 980 1115 2.5E-6 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 SMART SM01359 980 1118 0.0036 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 PANTHER PTHR11412:SF80 919 1095 2.1E-26 T 23-04-2016 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 PANTHER PTHR11412:SF80 597 881 2.1E-26 T 23-04-2016 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 Pfam PF01835 MG2 domain 596 678 2.0E-15 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 PANTHER PTHR11412 919 1095 2.1E-26 T 23-04-2016 NIAKO_RS00665 1f9733fd56bc474359209a73ef88d38e 1291 PANTHER PTHR11412 597 881 2.1E-26 T 23-04-2016 NIAKO_RS19805 acfdcdc22a6c589dc1f66ddbf3b2e40e 191 SUPERFAMILY SSF56925 26 165 1.44E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS19805 acfdcdc22a6c589dc1f66ddbf3b2e40e 191 Pfam PF13568 Outer membrane protein beta-barrel domain 24 167 3.9E-16 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 PANTHER PTHR13754 1 257 1.3E-61 T 23-04-2016 NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 Pfam PF12706 Beta-lactamase superfamily domain 26 206 1.3E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 SUPERFAMILY SSF56281 1 232 4.72E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 Gene3D G3DSA:3.60.15.10 11 242 2.3E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 SMART SM00849 13 188 4.7E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13120 3149af3a8aa4f3c2e87bd3f1c2a4a9c6 284 PANTHER PTHR13754:SF15 1 257 1.3E-61 T 23-04-2016 NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 SUPERFAMILY SSF55347 134 290 4.25E-13 T 23-04-2016 NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 127 2.3E-12 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 PANTHER PTHR22604 11 343 6.2E-39 T 23-04-2016 NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 Gene3D G3DSA:3.30.360.10 139 343 1.2E-19 T 23-04-2016 NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 Gene3D G3DSA:3.40.50.720 11 138 2.8E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17840 562f4daca765bc8b700fa4ddd0fede28 353 SUPERFAMILY SSF51735 10 159 8.93E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01415 5cbb9f5003c9c66b50d23b7d6407f8ec 395 PANTHER PTHR30480 21 340 1.3E-88 T 23-04-2016 NIAKO_RS01415 5cbb9f5003c9c66b50d23b7d6407f8ec 395 Pfam PF07075 Protein of unknown function (DUF1343) 23 356 8.9E-103 T 23-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 NIAKO_RS01415 5cbb9f5003c9c66b50d23b7d6407f8ec 395 PANTHER PTHR30480:SF3 21 340 1.3E-88 T 23-04-2016 NIAKO_RS01415 5cbb9f5003c9c66b50d23b7d6407f8ec 395 PIRSF PIRSF016719 1 366 3.8E-103 T 23-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 NIAKO_RS11805 1012c4b8b83e7ae7d08b26a2766bf679 127 SMART SM00342 28 112 3.3E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11805 1012c4b8b83e7ae7d08b26a2766bf679 127 SUPERFAMILY SSF46689 67 117 3.27E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11805 1012c4b8b83e7ae7d08b26a2766bf679 127 Gene3D G3DSA:1.10.10.60 65 115 1.5E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11805 1012c4b8b83e7ae7d08b26a2766bf679 127 Pfam PF12833 Helix-turn-helix domain 44 112 7.5E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS05460 2610dcc4fbe154956418e5bb7c074ac5 795 SUPERFAMILY SSF55781 358 416 8.34E-6 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS05460 2610dcc4fbe154956418e5bb7c074ac5 795 Gene3D G3DSA:3.30.450.40 362 416 1.2E-4 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 PANTHER PTHR12526 6 44 5.8E-24 T 23-04-2016 NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 PANTHER PTHR12526 60 372 5.8E-24 T 23-04-2016 NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 SUPERFAMILY SSF53756 6 372 8.9E-47 T 23-04-2016 NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 Pfam PF13439 Glycosyltransferase Family 4 17 167 4.1E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 Gene3D G3DSA:3.40.50.2000 182 343 2.1E-13 T 23-04-2016 NIAKO_RS12555 3c3e2fb6ec728a4c3d126dcd736a4290 372 Pfam PF00534 Glycosyl transferases group 1 190 346 4.2E-20 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS30640 d205daf8a24d7816dbb7b0617127b14a 181 PANTHER PTHR30543:SF6 1 173 9.2E-27 T 23-04-2016 NIAKO_RS30640 d205daf8a24d7816dbb7b0617127b14a 181 PANTHER PTHR30543 1 173 9.2E-27 T 23-04-2016 NIAKO_RS30640 d205daf8a24d7816dbb7b0617127b14a 181 Gene3D G3DSA:3.40.50.360 2 174 2.7E-34 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS30640 d205daf8a24d7816dbb7b0617127b14a 181 SUPERFAMILY SSF52218 6 168 1.93E-28 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS30640 d205daf8a24d7816dbb7b0617127b14a 181 Pfam PF03358 NADPH-dependent FMN reductase 6 140 1.5E-25 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NIAKO_RS02315 7fdd4cac0bba537975c9d866b8e141d0 1279 Pfam PF04865 Baseplate J-like protein 993 1183 1.3E-4 T 23-04-2016 IPR006949 Baseplate protein J-like NIAKO_RS17340 6807af86d095a0e4087d544709f0e598 532 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 530 3.2E-109 T 23-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 NIAKO_RS17340 6807af86d095a0e4087d544709f0e598 532 PANTHER PTHR10110 7 531 2.0E-98 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 NIAKO_RS17340 6807af86d095a0e4087d544709f0e598 532 PANTHER PTHR10110:SF86 7 531 2.0E-98 T 23-04-2016 NIAKO_RS17340 6807af86d095a0e4087d544709f0e598 532 Pfam PF00999 Sodium/hydrogen exchanger family 12 409 3.0E-63 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 PANTHER PTHR24221:SF138 1 591 2.1E-89 T 23-04-2016 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 Pfam PF00005 ABC transporter 366 514 2.3E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 Gene3D G3DSA:3.40.50.300 345 586 7.7E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 Pfam PF00664 ABC transporter transmembrane region 25 270 4.6E-18 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 Gene3D G3DSA:1.20.1560.10 13 311 4.1E-36 T 23-04-2016 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 PANTHER PTHR24221 1 591 2.1E-89 T 23-04-2016 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 SUPERFAMILY SSF52540 342 584 9.1E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 SUPERFAMILY SSF90123 11 308 6.28E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS35020 01b02085b4997874feec4fd1c6c5d0e8 591 SMART SM00382 375 587 3.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS09315 27d5f4d408f6aed7d23bcfce47cf4c1d 396 Pfam PF12094 Protein of unknown function (DUF3570) 111 354 3.2E-35 T 23-04-2016 IPR021953 Protein of unknown function DUF3570 NIAKO_RS06410 5583e8393faedf8d7250cc2b2ab727f9 390 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 79 353 4.2E-9 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS06410 5583e8393faedf8d7250cc2b2ab727f9 390 Gene3D G3DSA:3.20.20.80 58 369 4.9E-67 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS06410 5583e8393faedf8d7250cc2b2ab727f9 390 SUPERFAMILY SSF51445 59 378 2.54E-53 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30545 d83cf5b0d34a0117938aef7feaa51cb3 83 Pfam PF06243 Phenylacetic acid degradation B 2 79 2.8E-33 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NIAKO_RS30545 d83cf5b0d34a0117938aef7feaa51cb3 83 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 2 83 1.3E-37 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NIAKO_RS30545 d83cf5b0d34a0117938aef7feaa51cb3 83 PIRSF PIRSF030200 1 83 1.4E-35 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 SUPERFAMILY SSF56801 333 593 1.02E-107 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 SUPERFAMILY SSF56801 7 286 1.02E-107 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 PRINTS PR00154 AMP-binding signature 179 190 3.9E-5 T 23-04-2016 IPR020459 AMP-binding NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 PRINTS PR00154 AMP-binding signature 191 199 3.9E-5 T 23-04-2016 IPR020459 AMP-binding NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 PANTHER PTHR24096 28 593 2.5E-174 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 PANTHER PTHR24096:SF193 28 593 2.5E-174 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 Gene3D G3DSA:3.40.50.980 22 190 1.4E-33 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 Gene3D G3DSA:2.30.38.10 402 458 2.6E-17 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 Gene3D G3DSA:3.40.50.980 330 390 4.0E-32 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 Gene3D G3DSA:3.40.50.980 191 281 4.0E-32 T 23-04-2016 NIAKO_RS28630 1e16758bc5b09260c4ee955db901f186 594 Pfam PF00501 AMP-binding enzyme 22 464 2.0E-95 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS32185 d3df741b633bf43571c94539796ae1d3 330 Pfam PF00534 Glycosyl transferases group 1 158 270 2.2E-21 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS32185 d3df741b633bf43571c94539796ae1d3 330 Pfam PF13439 Glycosyltransferase Family 4 64 139 2.8E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS32185 d3df741b633bf43571c94539796ae1d3 330 PANTHER PTHR12526 68 327 4.0E-38 T 23-04-2016 NIAKO_RS32185 d3df741b633bf43571c94539796ae1d3 330 Gene3D G3DSA:3.40.50.2000 155 309 1.9E-15 T 23-04-2016 NIAKO_RS32185 d3df741b633bf43571c94539796ae1d3 330 SUPERFAMILY SSF53756 43 327 1.67E-50 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 Gene3D G3DSA:2.40.440.10 325 375 8.8E-13 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 Gene3D G3DSA:2.40.440.10 425 473 8.8E-13 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 Gene3D G3DSA:1.10.101.10 237 313 1.3E-8 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 PANTHER PTHR41533:SF1 205 542 7.4E-78 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 Pfam PF03734 L,D-transpeptidase catalytic domain 332 484 1.1E-31 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 SUPERFAMILY SSF141523 329 384 9.81E-22 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 SUPERFAMILY SSF141523 423 477 9.81E-22 T 23-04-2016 NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 SUPERFAMILY SSF47090 236 310 6.59E-7 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS19330 3efff8dfc7ea38695b34935b4a70f514 546 PANTHER PTHR41533 205 542 7.4E-78 T 23-04-2016 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 21 389 5.9E-91 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PANTHER PTHR10572 49 389 2.6E-62 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Gene3D G3DSA:3.90.770.10 77 109 1.3E-52 T 23-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Gene3D G3DSA:3.90.770.10 232 391 1.3E-52 T 23-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 168 186 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 213 238 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 48 69 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 79 99 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 262 288 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 314 335 1.4E-31 T 23-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 326 333 - T 23-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 SUPERFAMILY SSF56542 230 378 5.89E-50 T 23-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 SUPERFAMILY SSF56542 40 110 5.89E-50 T 23-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Pfam PF01636 Phosphotransferase enzyme family 507 706 2.1E-11 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 SUPERFAMILY SSF55035 113 232 1.18E-30 T 23-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Gene3D G3DSA:3.90.1200.10 562 704 1.4E-12 T 23-04-2016 NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 SUPERFAMILY SSF56112 503 763 2.1E-17 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS37235 a2e3d4e076126e74677f01323d1a5d6a 771 Gene3D G3DSA:3.30.70.420 113 231 4.3E-30 T 23-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 NIAKO_RS30865 2afeb1d14756767d6ae156646e0d3087 247 PANTHER PTHR34220:SF1 9 233 7.1E-63 T 23-04-2016 NIAKO_RS30865 2afeb1d14756767d6ae156646e0d3087 247 Pfam PF06580 Histidine kinase 41 120 1.3E-24 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS30865 2afeb1d14756767d6ae156646e0d3087 247 PANTHER PTHR34220 9 233 7.1E-63 T 23-04-2016 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 SUPERFAMILY SSF55973 2 108 7.46E-43 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Gene3D G3DSA:3.30.300.10 10 133 1.3E-45 T 23-04-2016 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Gene3D G3DSA:3.30.300.10 134 243 1.3E-37 T 23-04-2016 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 PANTHER PTHR11964 3 378 3.5E-218 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 PANTHER PTHR11964 399 412 3.5E-218 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 SUPERFAMILY SSF55973 111 242 3.83E-42 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 414 50.739 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 PIRSF PIRSF000497 1 415 4.4E-165 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 376 9.7E-62 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 SUPERFAMILY SSF55973 243 414 1.57E-58 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 383 2.9E-156 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 241 7.9E-44 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Gene3D G3DSA:3.30.300.10 254 415 2.7E-64 T 23-04-2016 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS07505 d05e097de40b10dd2e1c8e903dba7477 417 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 5.9E-41 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NIAKO_RS26420 4fe2d501747bc9bbec251e0fd6b15aa4 223 Pfam PF02469 Fasciclin domain 117 218 3.7E-5 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS26420 4fe2d501747bc9bbec251e0fd6b15aa4 223 Gene3D G3DSA:2.30.180.10 88 218 6.3E-6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS26420 4fe2d501747bc9bbec251e0fd6b15aa4 223 SUPERFAMILY SSF82153 116 218 1.96E-7 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 Gene3D G3DSA:1.10.10.10 134 230 2.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 SUPERFAMILY SSF46894 134 230 1.05E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 4.4E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 PANTHER PTHR26402:SF292 6 232 1.2E-69 T 23-04-2016 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 PANTHER PTHR26402 6 232 1.2E-69 T 23-04-2016 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 Gene3D G3DSA:3.40.50.2300 2 126 2.2E-40 T 23-04-2016 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 SUPERFAMILY SSF52172 3 131 1.85E-38 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 Pfam PF00072 Response regulator receiver domain 8 116 6.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 SMART SM00862 153 227 5.9E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS04900 097b73db5e95a1ba1192f90227a3d868 232 SMART SM00448 6 117 1.7E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 PANTHER PTHR30469:SF11 46 347 5.0E-64 T 23-04-2016 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 PANTHER PTHR30469 46 347 5.0E-64 T 23-04-2016 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 Gene3D G3DSA:2.40.50.100 160 191 3.0E-14 T 23-04-2016 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 Gene3D G3DSA:2.40.50.100 66 99 3.0E-14 T 23-04-2016 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 265 2.2E-24 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 345 1.6E-69 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS12650 becc9bf10c396bca9af3906b52d263b3 349 SUPERFAMILY SSF111369 54 272 2.62E-43 T 23-04-2016 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 Pfam PF12833 Helix-turn-helix domain 34 114 9.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 SMART SM00342 28 112 2.7E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 PANTHER PTHR11019 12 120 7.9E-16 T 23-04-2016 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 SUPERFAMILY SSF46689 64 116 8.96E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 PANTHER PTHR11019:SF50 12 120 7.9E-16 T 23-04-2016 NIAKO_RS23350 485ada8eabc746ffcc9b60f6ac355e63 129 Gene3D G3DSA:1.10.10.60 63 117 1.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS08880 e53a895f31a9bdfc471ea3706c178ccf 121 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 36 93 4.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS08880 e53a895f31a9bdfc471ea3706c178ccf 121 SUPERFAMILY SSF46785 15 115 1.02E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08880 e53a895f31a9bdfc471ea3706c178ccf 121 PANTHER PTHR30432 1 120 1.0E-25 T 23-04-2016 NIAKO_RS08880 e53a895f31a9bdfc471ea3706c178ccf 121 Gene3D G3DSA:1.10.10.10 13 119 1.4E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21325 274e854dc167b50251f038616d9d5ee4 337 SUPERFAMILY SSF88713 135 298 3.95E-40 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS21325 274e854dc167b50251f038616d9d5ee4 337 Pfam PF01522 Polysaccharide deacetylase 171 294 1.2E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS21325 274e854dc167b50251f038616d9d5ee4 337 Gene3D G3DSA:3.20.20.370 146 302 1.7E-35 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS21325 274e854dc167b50251f038616d9d5ee4 337 PANTHER PTHR34216:SF3 111 329 4.9E-41 T 23-04-2016 NIAKO_RS21325 274e854dc167b50251f038616d9d5ee4 337 PANTHER PTHR34216 111 329 4.9E-41 T 23-04-2016 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 Gene3D G3DSA:1.20.1560.10 23 340 1.8E-19 T 23-04-2016 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 Pfam PF00664 ABC transporter transmembrane region 64 291 1.0E-7 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 PANTHER PTHR24221 86 599 5.9E-110 T 23-04-2016 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 Pfam PF00005 ABC transporter 378 529 7.6E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 SMART SM00382 387 591 7.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 Gene3D G3DSA:3.40.50.300 363 596 1.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 SUPERFAMILY SSF52540 353 599 1.03E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 PANTHER PTHR24221:SF138 86 599 5.9E-110 T 23-04-2016 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 SUPERFAMILY SSF90123 505 513 3.79E-26 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 SUPERFAMILY SSF90123 84 327 3.79E-26 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS26320 89cc387ef72c7752a020641bb849001a 601 SUPERFAMILY SSF90123 20 57 3.79E-26 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS08185 ddabae53d91e8042235920930fa81e49 128 Pfam PF13564 DoxX-like family 12 97 1.8E-12 T 23-04-2016 IPR032808 DoxX family NIAKO_RS08185 ddabae53d91e8042235920930fa81e49 128 PIRSF PIRSF030066 1 128 3.9E-25 T 23-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 Gene3D G3DSA:3.40.50.1860 114 215 5.8E-29 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 3.8E-54 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 SUPERFAMILY SSF53681 118 228 2.83E-28 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 PANTHER PTHR21198 1 227 1.5E-63 T 23-04-2016 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 SUPERFAMILY SSF53681 1 116 3.27E-34 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 PANTHER PTHR21198:SF7 1 227 1.5E-63 T 23-04-2016 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 228 4.2E-60 T 23-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 NIAKO_RS26740 143ce3be08e3c0c1c57dd4bb963adc14 229 Gene3D G3DSA:3.40.50.1860 1 113 1.6E-37 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS07060 e930b4db1f5078327e30fcd12d6087ca 127 PANTHER PTHR33204 8 111 2.7E-30 T 23-04-2016 NIAKO_RS07060 e930b4db1f5078327e30fcd12d6087ca 127 Gene3D G3DSA:1.10.10.10 6 117 8.7E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07060 e930b4db1f5078327e30fcd12d6087ca 127 SUPERFAMILY SSF46785 16 118 8.53E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07060 e930b4db1f5078327e30fcd12d6087ca 127 Pfam PF01638 HxlR-like helix-turn-helix 30 113 5.9E-26 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 63 136 3.5E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 Gene3D G3DSA:3.30.1150.10 46 138 4.1E-9 T 23-04-2016 NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 SUPERFAMILY SSF74653 56 135 2.22E-16 T 23-04-2016 NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 61 137 1.9E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 PANTHER PTHR33446 35 139 1.1E-20 T 23-04-2016 NIAKO_RS27220 01dacc9eeb87db4b6a2b9b9659cacef1 139 PANTHER PTHR33446:SF2 35 139 1.1E-20 T 23-04-2016 NIAKO_RS02005 14f9d6b48be749ec38c1545cb0b2f58f 838 SUPERFAMILY SSF52317 632 830 1.3E-17 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS02005 14f9d6b48be749ec38c1545cb0b2f58f 838 Gene3D G3DSA:3.40.50.10320 46 291 2.7E-34 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS02005 14f9d6b48be749ec38c1545cb0b2f58f 838 Pfam PF02585 GlcNAc-PI de-N-acetylase 49 182 1.4E-14 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related NIAKO_RS02005 14f9d6b48be749ec38c1545cb0b2f58f 838 Gene3D G3DSA:3.40.50.880 629 807 1.9E-5 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS02005 14f9d6b48be749ec38c1545cb0b2f58f 838 SUPERFAMILY SSF102588 46 270 2.49E-31 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532:SF57 13 435 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532:SF57 523 549 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532:SF57 575 1052 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532 13 435 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532 523 549 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 PANTHER PTHR11532 575 1052 2.0E-214 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF56935 313 402 5.13E-56 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF56935 440 799 5.13E-56 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF56935 968 1054 5.13E-56 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF56935 878 921 5.13E-56 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF56935 118 256 5.13E-56 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 Gene3D G3DSA:2.170.130.10 129 240 5.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 Gene3D G3DSA:2.60.40.1120 39 104 2.4E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 Pfam PF13715 CarboxypepD_reg-like domain 40 121 6.5E-11 T 23-04-2016 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 SUPERFAMILY SSF49464 38 119 1.44E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 38 1054 1.2E-225 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 208 237 2.8E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS24520 d4958cf9ed225a9a96a1e7348710f886 1054 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 231 4.7E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS23735 0a56cffcf7082b649c37cb960a2836f6 139 SUPERFAMILY SSF52172 4 132 1.99E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS23735 0a56cffcf7082b649c37cb960a2836f6 139 Gene3D G3DSA:3.40.50.2300 3 133 9.5E-26 T 23-04-2016 NIAKO_RS23735 0a56cffcf7082b649c37cb960a2836f6 139 Pfam PF00072 Response regulator receiver domain 7 123 2.1E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23735 0a56cffcf7082b649c37cb960a2836f6 139 SMART SM00448 5 123 1.1E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS23735 0a56cffcf7082b649c37cb960a2836f6 139 PANTHER PTHR26402 5 139 1.2E-20 T 23-04-2016 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 Gene3D G3DSA:1.10.10.60 71 119 2.0E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 Gene3D G3DSA:1.10.10.60 9 65 5.2E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 Pfam PF12833 Helix-turn-helix domain 34 112 3.1E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 SUPERFAMILY SSF46689 12 62 5.38E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 107 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 PANTHER PTHR11019 9 117 2.4E-22 T 23-04-2016 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 SUPERFAMILY SSF46689 65 112 4.08E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 SMART SM00342 28 111 5.6E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS24400 f97f8c40ed8ad6abff02e22daeadd94b 129 PANTHER PTHR11019:SF61 9 117 2.4E-22 T 23-04-2016 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 Pfam PF01807 CHC2 zinc finger 30 87 2.4E-7 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 Gene3D G3DSA:3.40.1360.10 202 302 1.2E-10 T 23-04-2016 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 Gene3D G3DSA:3.90.580.10 7 87 8.3E-18 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 SUPERFAMILY SSF56731 151 299 9.42E-5 T 23-04-2016 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 Pfam PF13155 Toprim-like 208 295 2.7E-8 T 23-04-2016 NIAKO_RS19615 1f5bfdca192408f3931f7168c6dc7d41 313 SUPERFAMILY SSF57783 8 90 3.4E-18 T 23-04-2016 NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 SUPERFAMILY SSF69360 26 179 7.46E-10 T 23-04-2016 NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 Pfam PF14903 WG containing repeat 13 32 0.0032 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 Pfam PF14903 WG containing repeat 33 67 2.0E-9 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 Pfam PF14903 WG containing repeat 136 168 3.9E-10 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 Pfam PF14903 WG containing repeat 67 95 6.1E-11 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 Pfam PF14903 WG containing repeat 101 136 5.1E-11 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS19895 bb1f50c3caad8a996d5c83e35a93b456 182 PANTHER PTHR37841 13 180 1.7E-29 T 23-04-2016 NIAKO_RS13335 348c6150a87ad2d325219577d5644cd0 430 SUPERFAMILY SSF103473 9 424 6.71E-10 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 PRINTS PR00061 Ribosomal protein L19 signature 89 114 1.3E-32 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 PRINTS PR00061 Ribosomal protein L19 signature 35 64 1.3E-32 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 PRINTS PR00061 Ribosomal protein L19 signature 5 34 1.3E-32 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 114 3.7E-44 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 Pfam PF01245 Ribosomal protein L19 11 114 2.1E-44 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 115 28.228 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 PANTHER PTHR15680 10 115 1.8E-41 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 PIRSF PIRSF002191 1 123 2.3E-46 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS27550 56dd366800411e6bfe80da3092f0c1e4 123 SUPERFAMILY SSF50104 8 115 8.02E-41 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS21115 538843a7051b84f88198c49ce4bc392f 378 PANTHER PTHR33567 3 374 2.1E-64 T 23-04-2016 NIAKO_RS21115 538843a7051b84f88198c49ce4bc392f 378 PIRSF PIRSF004810 1 378 2.9E-91 T 23-04-2016 IPR014047 Chromate transporter, long chain NIAKO_RS21115 538843a7051b84f88198c49ce4bc392f 378 TIGRFAM TIGR00937 2A51: chromate efflux transporter 14 371 2.3E-125 T 23-04-2016 IPR014047 Chromate transporter, long chain NIAKO_RS21115 538843a7051b84f88198c49ce4bc392f 378 Pfam PF02417 Chromate transporter 208 371 1.3E-36 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS21115 538843a7051b84f88198c49ce4bc392f 378 Pfam PF02417 Chromate transporter 10 173 1.2E-36 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 PANTHER PTHR11609 1 370 6.2E-98 T 23-04-2016 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 SUPERFAMILY SSF56059 100 294 1.25E-39 T 23-04-2016 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 359 2.9E-96 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 SUPERFAMILY SSF51246 298 368 2.75E-13 T 23-04-2016 IPR011054 Rudiment single hybrid motif NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 Pfam PF02222 ATP-grasp domain 109 273 5.8E-34 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 Gene3D G3DSA:3.30.470.20 142 371 5.8E-61 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 Gene3D G3DSA:3.40.50.20 2 108 2.5E-31 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 355 34.134 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 SUPERFAMILY SSF52440 2 96 5.18E-24 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS12645 fbc7d8ef788a28b5c0b7b060cca54870 373 PANTHER PTHR11609:SF8 1 370 6.2E-98 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 Pfam PF13620 Carboxypeptidase regulatory-like domain 20 89 1.2E-14 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 PANTHER PTHR32552:SF38 29 326 1.6E-101 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 PANTHER PTHR32552:SF38 342 808 1.6E-101 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 PANTHER PTHR32552 29 326 1.6E-101 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 PANTHER PTHR32552 342 808 1.6E-101 T 23-04-2016 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 Pfam PF07715 TonB-dependent Receptor Plug Domain 111 217 8.7E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 Gene3D G3DSA:2.40.170.20 220 807 2.2E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 SUPERFAMILY SSF49464 21 95 3.92E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 Gene3D G3DSA:2.170.130.10 103 219 1.7E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 Gene3D G3DSA:2.60.40.1120 21 94 1.7E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01595 d785ed16d21f5f4b47cdc94672d46a83 808 SUPERFAMILY SSF56935 100 807 3.37E-77 T 23-04-2016 NIAKO_RS29040 e70eb5606ade550ada883e2a5dd409cf 251 PIRSF PIRSF030959 6 247 5.0E-42 T 23-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing NIAKO_RS29040 e70eb5606ade550ada883e2a5dd409cf 251 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 49 2.2E-7 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal NIAKO_RS29040 e70eb5606ade550ada883e2a5dd409cf 251 Gene3D G3DSA:1.25.40.10 92 217 3.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29040 e70eb5606ade550ada883e2a5dd409cf 251 SUPERFAMILY SSF48452 85 218 4.27E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31555 582e2f5a28e257bae78972dcb403162a 163 Pfam PF00583 Acetyltransferase (GNAT) family 54 133 1.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS31555 582e2f5a28e257bae78972dcb403162a 163 SUPERFAMILY SSF55729 1 157 1.83E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS31555 582e2f5a28e257bae78972dcb403162a 163 PANTHER PTHR23091 1 153 7.4E-15 T 23-04-2016 NIAKO_RS31555 582e2f5a28e257bae78972dcb403162a 163 Gene3D G3DSA:3.40.630.30 2 157 2.9E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 Gene3D G3DSA:3.40.50.2300 175 313 2.6E-35 T 23-04-2016 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 PANTHER PTHR30146 3 336 6.7E-98 T 23-04-2016 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 SUPERFAMILY SSF53822 62 335 8.52E-61 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 Gene3D G3DSA:1.10.260.40 4 55 2.9E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 6.2E-29 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 SMART SM00354 3 73 7.4E-19 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 1.8E-8 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 SUPERFAMILY SSF47413 3 61 2.17E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26355 2af14cd7ea5da8b127d59d5bd91af190 338 Gene3D G3DSA:3.40.50.2300 56 174 3.8E-44 T 23-04-2016 NIAKO_RS10370 341b6b5e962f1250943a5976b84154fe 184 SUPERFAMILY SSF52833 10 169 3.16E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS10370 341b6b5e962f1250943a5976b84154fe 184 Pfam PF13462 Thioredoxin 9 168 4.0E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS10370 341b6b5e962f1250943a5976b84154fe 184 PANTHER PTHR13887 13 176 5.5E-39 T 23-04-2016 NIAKO_RS10370 341b6b5e962f1250943a5976b84154fe 184 Gene3D G3DSA:3.40.30.10 9 174 2.0E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 375 2.0E-145 T 23-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 SUPERFAMILY SSF52440 164 273 1.52E-38 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 PANTHER PTHR30094:SF0 6 375 4.6E-111 T 23-04-2016 NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 SUPERFAMILY SSF56059 260 373 3.71E-78 T 23-04-2016 NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 SUPERFAMILY SSF56059 1 159 3.71E-78 T 23-04-2016 NIAKO_RS15865 ab2e346f550b63263a7b1b68d33caa6c 376 PANTHER PTHR30094 6 375 4.6E-111 T 23-04-2016 NIAKO_RS11170 f06a971003de972840de4083357622ff 155 SUPERFAMILY SSF52833 2 150 2.08E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11170 f06a971003de972840de4083357622ff 155 PIRSF PIRSF000239 2 155 5.8E-25 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS11170 f06a971003de972840de4083357622ff 155 Pfam PF00578 AhpC/TSA family 5 128 1.6E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS11170 f06a971003de972840de4083357622ff 155 PANTHER PTHR10681 6 136 2.8E-39 T 23-04-2016 NIAKO_RS11170 f06a971003de972840de4083357622ff 155 Gene3D G3DSA:3.40.30.10 5 150 2.3E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 Gene3D G3DSA:3.40.50.300 6 243 1.2E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 Gene3D G3DSA:3.40.50.300 245 488 4.9E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 PANTHER PTHR22942 11 312 6.0E-55 T 23-04-2016 NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 PANTHER PTHR22942:SF43 11 312 6.0E-55 T 23-04-2016 NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 SMART SM00382 274 441 0.096 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 SMART SM00382 33 205 1.5 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 SUPERFAMILY SSF52540 254 475 5.21E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 Pfam PF06745 KaiC 17 241 3.3E-67 T 23-04-2016 IPR014774 KaiC-like domain NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 Pfam PF06745 KaiC 257 472 1.4E-37 T 23-04-2016 IPR014774 KaiC-like domain NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 SUPERFAMILY SSF52540 11 241 5.95E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS15630 54bbbaa131eb3b091ec96eaa0073fa71 573 PIRSF PIRSF039117 1 502 7.2E-146 T 23-04-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 NIAKO_RS03855 aa3701f73f51bade80753dabab11747d 148 Pfam PF00355 Rieske [2Fe-2S] domain 68 133 6.7E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS03855 aa3701f73f51bade80753dabab11747d 148 SUPERFAMILY SSF50022 67 144 1.96E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS03855 aa3701f73f51bade80753dabab11747d 148 Gene3D G3DSA:2.102.10.10 1 143 3.5E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NIAKO_RS17630 e4cfc4abf0043a88f614dac2d0b7b326 779 SUPERFAMILY SSF48208 295 768 7.65E-33 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17760 07008cf1b8b11bc3112e6a350aec6aba 552 PANTHER PTHR31683 80 414 3.9E-115 T 23-04-2016 NIAKO_RS17760 07008cf1b8b11bc3112e6a350aec6aba 552 Gene3D G3DSA:2.160.20.10 69 424 9.8E-52 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17760 07008cf1b8b11bc3112e6a350aec6aba 552 SUPERFAMILY SSF51126 43 426 1.15E-64 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17760 07008cf1b8b11bc3112e6a350aec6aba 552 PANTHER PTHR31683:SF9 80 414 3.9E-115 T 23-04-2016 NIAKO_RS31055 a6290bf9f21817f336b3ff6f101722e8 234 Pfam PF04973 Nicotinamide mononucleotide transporter 40 223 1.5E-47 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 NIAKO_RS31055 a6290bf9f21817f336b3ff6f101722e8 234 PANTHER PTHR36122:SF1 13 233 4.2E-29 T 23-04-2016 NIAKO_RS31055 a6290bf9f21817f336b3ff6f101722e8 234 PANTHER PTHR36122 13 233 4.2E-29 T 23-04-2016 NIAKO_RS31055 a6290bf9f21817f336b3ff6f101722e8 234 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 40 226 3.1E-24 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 10 295 2.4E-86 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 PANTHER PTHR36510:SF1 1 360 4.2E-135 T 23-04-2016 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 PANTHER PTHR36510 1 360 4.2E-135 T 23-04-2016 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 11 289 3.3E-56 T 23-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 370 74.03 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NIAKO_RS01945 4339cfeb1ecfa8d9676f0ce0fcb355a9 370 SUPERFAMILY SSF55931 7 364 6.18E-98 T 23-04-2016 NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 Pfam PF14873 N-terminal domain of BNR-repeat neuraminidase 30 158 5.2E-35 T 23-04-2016 IPR029456 Sialidase, N-terminal KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 SUPERFAMILY SSF50939 174 552 1.09E-84 T 23-04-2016 IPR011040 Sialidases NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 PANTHER PTHR10628 170 272 2.4E-84 T 23-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 PANTHER PTHR10628 298 552 2.4E-84 T 23-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 Gene3D G3DSA:2.120.10.10 175 551 6.6E-89 T 23-04-2016 IPR011040 Sialidases NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 Pfam PF13859 BNR repeat-like domain 190 483 9.3E-22 T 23-04-2016 IPR011040 Sialidases NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 PANTHER PTHR10628:SF19 170 272 2.4E-84 T 23-04-2016 NIAKO_RS13750 a70c12b84da31e558c6fd0dd7dab8f80 554 PANTHER PTHR10628:SF19 298 552 2.4E-84 T 23-04-2016 NIAKO_RS24425 b8019b1c37aa167f122fd9e66a807b70 165 Gene3D G3DSA:3.40.30.10 40 158 7.6E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS24425 b8019b1c37aa167f122fd9e66a807b70 165 SUPERFAMILY SSF52833 42 158 6.46E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 Pfam PF01095 Pectinesterase 33 312 2.1E-74 T 23-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 PANTHER PTHR31321 4 315 1.5E-107 T 23-04-2016 NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 ProSitePatterns PS00800 Pectinesterase signature 1. 56 75 - T 23-04-2016 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 ProSitePatterns PS00503 Pectinesterase signature 2. 177 186 - T 23-04-2016 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 PANTHER PTHR31321:SF1 4 315 1.5E-107 T 23-04-2016 NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 Gene3D G3DSA:2.160.20.10 29 316 1.9E-103 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS29150 96cc1ed5454a48f2df3b70e206359815 342 SUPERFAMILY SSF51126 28 315 2.75E-79 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 Gene3D G3DSA:2.40.10.240 64 144 1.2E-20 T 23-04-2016 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 PANTHER PTHR30307 2 349 2.8E-151 T 23-04-2016 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 349 9.4E-121 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 SUPERFAMILY SSF111337 1 348 1.22E-124 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 Pfam PF02547 Queuosine biosynthesis protein 3 348 1.0E-133 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 43.193 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 Gene3D G3DSA:3.40.1780.10 186 348 3.7E-93 T 23-04-2016 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 Gene3D G3DSA:3.40.1780.10 1 62 3.7E-93 T 23-04-2016 NIAKO_RS24840 8d4c5ee2525cbf573fb138183cb2bcf2 349 PANTHER PTHR30307:SF0 2 349 2.8E-151 T 23-04-2016 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Pfam PF05199 GMC oxidoreductase 439 563 8.3E-20 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Pfam PF00732 GMC oxidoreductase 104 327 2.7E-11 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 SUPERFAMILY SSF51905 112 353 5.07E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 SUPERFAMILY SSF51905 511 572 5.07E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 SUPERFAMILY SSF51905 15 78 5.07E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 PANTHER PTHR11552 19 88 7.4E-52 T 23-04-2016 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 PANTHER PTHR11552 107 565 7.4E-52 T 23-04-2016 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 PANTHER PTHR11552:SF139 19 88 7.4E-52 T 23-04-2016 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 PANTHER PTHR11552:SF139 107 565 7.4E-52 T 23-04-2016 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Gene3D G3DSA:3.50.50.60 15 172 7.5E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Gene3D G3DSA:3.50.50.60 242 350 7.5E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Gene3D G3DSA:3.50.50.60 449 462 7.5E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 Gene3D G3DSA:3.50.50.60 502 568 7.5E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23320 67bf36cc6c77f251b68cecfa23750818 576 SUPERFAMILY SSF54373 364 512 1.77E-45 T 23-04-2016 NIAKO_RS20415 9a0b0869ad907aaece2625ec191d1f09 474 Pfam PF07980 SusD family 322 473 2.9E-30 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20415 9a0b0869ad907aaece2625ec191d1f09 474 Pfam PF14322 Starch-binding associating with outer membrane 39 227 1.3E-27 T 23-04-2016 NIAKO_RS20415 9a0b0869ad907aaece2625ec191d1f09 474 SUPERFAMILY SSF48452 17 473 1.64E-96 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20415 9a0b0869ad907aaece2625ec191d1f09 474 Gene3D G3DSA:1.25.40.10 207 417 8.9E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PANTHER PTHR24319 1 258 1.1E-58 T 23-04-2016 NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 PANTHER PTHR24319:SF23 1 258 1.1E-58 T 23-04-2016 NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 Gene3D G3DSA:3.40.50.720 3 258 3.6E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 2.0E-40 T 23-04-2016 NIAKO_RS22365 96b58a77c954090a320e8a1299355ef4 261 SUPERFAMILY SSF51735 6 257 3.85E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF56935 1077 1164 8.06E-95 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF56935 443 531 8.06E-95 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF56935 569 915 8.06E-95 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF56935 993 1037 8.06E-95 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF56935 213 357 8.06E-95 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.60.40.1120 136 217 6.2E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 309 339 7.8E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 135 1164 1.2E-258 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Pfam PF13715 CarboxypepD_reg-like domain 136 217 4.7E-15 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532:SF57 609 671 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532:SF57 135 414 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532:SF57 439 497 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532:SF57 701 1162 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532 609 671 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532 135 414 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532 439 497 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 PANTHER PTHR11532 701 1162 3.7E-229 T 23-04-2016 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Pfam PF00593 TonB dependent receptor 748 1162 7.7E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.170.130.10 218 334 3.7E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 SUPERFAMILY SSF49464 135 215 1.57E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.40.170.20 1076 1164 3.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.40.170.20 553 941 3.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.40.170.20 1002 1027 3.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.40.170.20 335 353 3.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Gene3D G3DSA:2.40.170.20 452 516 3.4E-59 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS09010 da0cc7c961ca30a50f71063338cb97e0 1164 Pfam PF07715 TonB-dependent Receptor Plug Domain 229 333 5.6E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 Gene3D G3DSA:3.30.950.10 121 236 7.3E-29 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 PANTHER PTHR21091 82 187 1.0E-17 T 23-04-2016 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 PIRSF PIRSF005917 2 237 3.4E-46 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 24 216 4.9E-10 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 SUPERFAMILY SSF53790 6 233 2.36E-60 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS34480 6a911423e47022716d9e59ff0cec172c 237 PANTHER PTHR21091:SF18 82 187 1.0E-17 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 PANTHER PTHR11532 142 150 7.3E-32 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 PANTHER PTHR11532 641 1077 7.3E-32 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 PANTHER PTHR11532:SF57 142 150 7.3E-32 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 PANTHER PTHR11532:SF57 641 1077 7.3E-32 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 SUPERFAMILY SSF56935 908 953 3.25E-31 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 SUPERFAMILY SSF56935 208 288 3.25E-31 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 SUPERFAMILY SSF56935 484 843 3.25E-31 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 SUPERFAMILY SSF56935 362 451 3.25E-31 T 23-04-2016 NIAKO_RS07155 f3616e1757c8c70a6be06a029ff05751 1079 SUPERFAMILY SSF56935 997 1077 3.25E-31 T 23-04-2016 NIAKO_RS26965 a2a839c61108361cf2c644b52fc34734 251 Pfam PF02591 C4-type zinc ribbon domain 207 239 3.3E-13 T 23-04-2016 IPR003743 C4-type zinc ribbon domain NIAKO_RS26965 a2a839c61108361cf2c644b52fc34734 251 PANTHER PTHR39082 9 251 4.5E-28 T 23-04-2016 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 9.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 9.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 PANTHER PTHR11019:SF50 67 305 5.2E-35 T 23-04-2016 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 SMART SM00342 219 302 5.8E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 PANTHER PTHR11019 67 305 5.2E-35 T 23-04-2016 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 Gene3D G3DSA:1.10.10.60 257 304 4.6E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 Pfam PF12833 Helix-turn-helix domain 225 303 9.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10055 99e4c43e9f85d41f6613ab01432a8a87 306 SUPERFAMILY SSF46689 257 305 5.82E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 PANTHER PTHR10357 132 492 1.8E-152 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 PANTHER PTHR10357 3 110 1.8E-152 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 Gene3D G3DSA:2.60.40.1180 407 492 1.7E-35 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 Pfam PF09154 Domain of unknown function (DUF1939) 444 490 1.9E-5 T 23-04-2016 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 Pfam PF00128 Alpha amylase, catalytic domain 31 334 4.5E-22 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 SUPERFAMILY SSF51445 5 372 6.47E-87 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 PANTHER PTHR10357:SF168 132 492 1.8E-152 T 23-04-2016 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 PANTHER PTHR10357:SF168 3 110 1.8E-152 T 23-04-2016 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 SUPERFAMILY SSF51011 404 492 2.01E-33 T 23-04-2016 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 PIRSF PIRSF001021 1 495 7.0E-199 T 23-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 SMART SM00642 4 414 1.1E-49 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS15690 d8db4494b7a6cfe4e67d9cafb91b6ac1 495 Gene3D G3DSA:3.20.20.80 2 391 2.6E-65 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS31235 ea0f88b3e532208c4294ac1ac6037170 344 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 10 220 1.8E-50 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NIAKO_RS31235 ea0f88b3e532208c4294ac1ac6037170 344 PIRSF PIRSF000267 7 344 4.2E-106 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NIAKO_RS31235 ea0f88b3e532208c4294ac1ac6037170 344 PANTHER PTHR30365:SF6 5 341 2.0E-93 T 23-04-2016 NIAKO_RS31235 ea0f88b3e532208c4294ac1ac6037170 344 PANTHER PTHR30365 5 341 2.0E-93 T 23-04-2016 NIAKO_RS31235 ea0f88b3e532208c4294ac1ac6037170 344 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 333 1.4E-91 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NIAKO_RS19350 9defce9d68b3692cf2b4528dd7cd6e93 419 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 42 358 4.3E-68 T 23-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 NIAKO_RS19350 9defce9d68b3692cf2b4528dd7cd6e93 419 PANTHER PTHR10151 5 399 5.6E-113 T 23-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family NIAKO_RS19350 9defce9d68b3692cf2b4528dd7cd6e93 419 Gene3D G3DSA:3.40.720.10 32 324 2.0E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS19350 9defce9d68b3692cf2b4528dd7cd6e93 419 SUPERFAMILY SSF53649 36 398 2.78E-84 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 PANTHER PTHR11986 17 393 9.3E-129 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 215 252 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 SUPERFAMILY SSF53383 10 391 8.62E-109 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 Gene3D G3DSA:3.40.640.10 56 299 2.2E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 Gene3D G3DSA:3.90.1150.10 302 392 5.9E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 Gene3D G3DSA:3.90.1150.10 11 55 5.9E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS27920 451f877e0ed0f6d3d140f3a2da33b319 394 Pfam PF00202 Aminotransferase class-III 19 390 3.3E-97 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS36485 ccd90d7db0caa15990046d7b4cff9c2c 161 SUPERFAMILY SSF51182 66 153 1.4E-11 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS36485 ccd90d7db0caa15990046d7b4cff9c2c 161 Gene3D G3DSA:2.60.120.10 59 156 5.6E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS34145 9796f867e0213efd4f472241dab041f3 454 PANTHER PTHR23519 6 453 2.0E-49 T 23-04-2016 NIAKO_RS34145 9796f867e0213efd4f472241dab041f3 454 Pfam PF11700 Vacuole effluxer Atg22 like 6 442 1.3E-67 T 23-04-2016 IPR024671 Autophagy-related protein 22-like NIAKO_RS34145 9796f867e0213efd4f472241dab041f3 454 Gene3D G3DSA:1.20.1250.20 261 449 1.5E-11 T 23-04-2016 NIAKO_RS34145 9796f867e0213efd4f472241dab041f3 454 Gene3D G3DSA:1.20.1250.20 56 238 8.7E-11 T 23-04-2016 NIAKO_RS34145 9796f867e0213efd4f472241dab041f3 454 SUPERFAMILY SSF103473 6 450 3.53E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS20135 5122e558e7668a5878251d9fd8dfdd93 490 SUPERFAMILY SSF48452 15 215 2.78E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20135 5122e558e7668a5878251d9fd8dfdd93 490 SUPERFAMILY SSF48452 242 487 2.78E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20135 5122e558e7668a5878251d9fd8dfdd93 490 Pfam PF14322 Starch-binding associating with outer membrane 19 203 4.8E-21 T 23-04-2016 NIAKO_RS20135 5122e558e7668a5878251d9fd8dfdd93 490 Pfam PF07980 SusD family 360 457 2.0E-10 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20135 5122e558e7668a5878251d9fd8dfdd93 490 Gene3D G3DSA:1.25.40.10 238 443 2.9E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 Gene3D G3DSA:3.90.1150.10 258 361 1.3E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 SUPERFAMILY SSF53383 27 366 1.63E-86 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 Pfam PF00155 Aminotransferase class I and II 28 363 8.8E-46 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 PANTHER PTHR13693:SF53 1 367 1.7E-139 T 23-04-2016 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 PANTHER PTHR13693 1 367 1.7E-139 T 23-04-2016 NIAKO_RS07550 76f9160052bb340545cf6e1971673b86 367 Gene3D G3DSA:3.40.640.10 56 257 1.2E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS00105 58a60968105b52df867ef668adad6b1f 309 PANTHER PTHR30565:SF3 2 252 3.7E-78 T 23-04-2016 NIAKO_RS00105 58a60968105b52df867ef668adad6b1f 309 Pfam PF05067 Manganese containing catalase 1 278 5.8E-71 T 23-04-2016 IPR007760 Manganese catalase NIAKO_RS00105 58a60968105b52df867ef668adad6b1f 309 SUPERFAMILY SSF47240 1 261 1.31E-75 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS00105 58a60968105b52df867ef668adad6b1f 309 Gene3D G3DSA:1.20.1260.10 1 211 1.8E-70 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS00105 58a60968105b52df867ef668adad6b1f 309 PANTHER PTHR30565 2 252 3.7E-78 T 23-04-2016 NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 Gene3D G3DSA:3.60.10.10 1 253 6.3E-93 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 1.9E-29 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.9E-85 T 23-04-2016 NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 PANTHER PTHR22748 1 253 6.4E-105 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 2.1E-88 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 SUPERFAMILY SSF56219 1 253 2.36E-76 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29655 5f9d6fb53f65368dd98ab1232be309d3 257 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 NIAKO_RS20720 8093381a1f7239b17f72f000ce1a5d73 715 Gene3D G3DSA:2.40.170.20 132 657 3.0E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20720 8093381a1f7239b17f72f000ce1a5d73 715 Pfam PF14905 Outer membrane protein beta-barrel family 283 689 6.4E-94 T 23-04-2016 NIAKO_RS20720 8093381a1f7239b17f72f000ce1a5d73 715 SUPERFAMILY SSF56935 24 691 3.04E-49 T 23-04-2016 NIAKO_RS20720 8093381a1f7239b17f72f000ce1a5d73 715 Gene3D G3DSA:2.170.130.10 45 131 4.9E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 Gene3D G3DSA:3.40.50.150 202 247 8.5E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 Gene3D G3DSA:3.40.50.150 6 149 8.5E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 SUPERFAMILY SSF53335 13 246 1.03E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 Pfam PF13489 Methyltransferase domain 22 179 3.4E-15 T 23-04-2016 NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 PANTHER PTHR10108 10 148 8.0E-19 T 23-04-2016 NIAKO_RS21785 f3d5553a994e1dfc1bff082f15fae191 247 PANTHER PTHR10108:SF705 10 148 8.0E-19 T 23-04-2016 NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 Pfam PF01183 Glycosyl hydrolases family 25 60 235 8.1E-49 T 23-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 PANTHER PTHR34135:SF2 18 253 4.1E-54 T 23-04-2016 NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 SMART SM00641 57 168 4.3E-15 T 23-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 PANTHER PTHR34135 18 253 4.1E-54 T 23-04-2016 NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 SUPERFAMILY SSF51445 54 254 5.26E-54 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30735 2b51a1694c4f353728011e2aa17f2cf5 257 Gene3D G3DSA:3.20.20.80 55 254 1.1E-62 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17155 56b362f68282fdf3e4ce3cbcdd0988f3 261 PANTHER PTHR10108 4 140 9.8E-23 T 23-04-2016 NIAKO_RS17155 56b362f68282fdf3e4ce3cbcdd0988f3 261 Gene3D G3DSA:3.40.50.150 9 188 1.3E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17155 56b362f68282fdf3e4ce3cbcdd0988f3 261 SUPERFAMILY SSF53335 14 146 1.69E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17155 56b362f68282fdf3e4ce3cbcdd0988f3 261 PANTHER PTHR10108:SF730 4 140 9.8E-23 T 23-04-2016 NIAKO_RS17155 56b362f68282fdf3e4ce3cbcdd0988f3 261 Pfam PF08241 Methyltransferase domain 46 139 7.7E-15 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS21580 2fc6651ba6e02ea4494ea7c411ae886c 402 SUPERFAMILY SSF48208 56 401 5.44E-97 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS21580 2fc6651ba6e02ea4494ea7c411ae886c 402 Pfam PF07470 Glycosyl Hydrolase Family 88 75 397 4.6E-18 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS21580 2fc6651ba6e02ea4494ea7c411ae886c 402 PANTHER PTHR36845 3 400 4.7E-93 T 23-04-2016 NIAKO_RS21580 2fc6651ba6e02ea4494ea7c411ae886c 402 PANTHER PTHR36845:SF1 3 400 4.7E-93 T 23-04-2016 NIAKO_RS21580 2fc6651ba6e02ea4494ea7c411ae886c 402 Gene3D G3DSA:1.50.10.10 39 400 9.4E-138 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS12570 8af9dcb1d1252628a9fd3c5503013efe 233 Pfam PF00483 Nucleotidyl transferase 5 228 1.6E-25 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS12570 8af9dcb1d1252628a9fd3c5503013efe 233 PANTHER PTHR22572 3 228 4.6E-51 T 23-04-2016 NIAKO_RS12570 8af9dcb1d1252628a9fd3c5503013efe 233 SUPERFAMILY SSF53448 4 230 5.07E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS12570 8af9dcb1d1252628a9fd3c5503013efe 233 Gene3D G3DSA:3.90.550.10 4 228 4.5E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS07285 876a64b688c5dca70a24900acab0474b 334 Pfam PF14501 GHKL domain 247 328 4.2E-5 T 23-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain NIAKO_RS07285 876a64b688c5dca70a24900acab0474b 334 Gene3D G3DSA:3.30.565.10 196 318 1.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07285 876a64b688c5dca70a24900acab0474b 334 PANTHER PTHR34220 8 325 4.5E-59 T 23-04-2016 NIAKO_RS07285 876a64b688c5dca70a24900acab0474b 334 Pfam PF06580 Histidine kinase 146 224 2.4E-21 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS07285 876a64b688c5dca70a24900acab0474b 334 SUPERFAMILY SSF55874 204 312 3.61E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 SUPERFAMILY SSF54782 232 319 1.14E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 Gene3D G3DSA:3.40.190.10 2 103 8.0E-37 T 23-04-2016 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PIRSF PIRSF001438 1 322 6.8E-93 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PANTHER PTHR11557:SF0 1 320 1.1E-99 T 23-04-2016 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 SUPERFAMILY SSF53850 4 227 3.04E-56 T 23-04-2016 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 309 1.9E-80 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 Gene3D G3DSA:3.30.160.40 233 317 1.6E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 222 6.3E-65 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 1.2E-18 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PRINTS PR00151 Porphobilinogen deaminase signature 242 259 1.2E-18 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 1.2E-18 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 PANTHER PTHR11557 1 320 1.1E-99 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 238 307 7.6E-14 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 Gene3D G3DSA:3.40.190.10 104 211 6.1E-24 T 23-04-2016 NIAKO_RS28170 5dee14a7fa4be9644270daafa34487e8 322 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 243 259 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 Gene3D G3DSA:2.60.40.1500 453 603 2.2E-36 T 23-04-2016 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 PANTHER PTHR12631 144 568 3.6E-40 T 23-04-2016 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 SUPERFAMILY SSF51445 133 459 1.3E-51 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 SUPERFAMILY SSF51011 450 603 3.6E-28 T 23-04-2016 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 Gene3D G3DSA:3.20.20.80 82 452 1.0E-74 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 Pfam PF01229 Glycosyl hydrolases family 39 149 602 7.8E-55 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 PRINTS PR00745 Glycosyl hydrolase family 39 signature 537 548 2.2E-9 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 PRINTS PR00745 Glycosyl hydrolase family 39 signature 311 325 2.2E-9 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 PRINTS PR00745 Glycosyl hydrolase family 39 signature 548 562 2.2E-9 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS17925 f03e2e8730766b0480108574ea2dc438 604 PRINTS PR00745 Glycosyl hydrolase family 39 signature 160 176 2.2E-9 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 NIAKO_RS35515 ac2f8e004707a19b972da556fac0750f 204 PANTHER PTHR33269:SF1 1 195 1.3E-29 T 23-04-2016 NIAKO_RS35515 ac2f8e004707a19b972da556fac0750f 204 PANTHER PTHR33269 1 195 1.3E-29 T 23-04-2016 NIAKO_RS35515 ac2f8e004707a19b972da556fac0750f 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 164 9.6E-31 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 PANTHER PTHR30173 1 179 2.1E-29 T 23-04-2016 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 SUPERFAMILY SSF88659 114 176 2.83E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 Gene3D G3DSA:1.10.10.10 115 178 7.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 Pfam PF04542 Sigma-70 region 2 26 94 1.3E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 175 1.4E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 Pfam PF08281 Sigma-70, region 4 121 172 2.3E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 SUPERFAMILY SSF88946 5 101 2.35E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08980 ea04a62244ab8cdabcd5990f77bcd6e6 181 Gene3D G3DSA:1.10.1740.10 7 109 1.6E-21 T 23-04-2016 NIAKO_RS05070 642f060ec4231355b49f8f60a6580702 497 Pfam PF01943 Polysaccharide biosynthesis protein 5 270 3.0E-10 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS05070 642f060ec4231355b49f8f60a6580702 497 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 367 477 6.3E-9 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NIAKO_RS27565 9de1163278782711949860095855b650 363 PANTHER PTHR21666 109 246 1.1E-34 T 23-04-2016 NIAKO_RS27565 9de1163278782711949860095855b650 363 SUPERFAMILY SSF53955 108 247 2.36E-31 T 23-04-2016 IPR023346 Lysozyme-like domain NIAKO_RS27565 9de1163278782711949860095855b650 363 Gene3D G3DSA:1.10.530.10 108 249 5.2E-37 T 23-04-2016 NIAKO_RS27565 9de1163278782711949860095855b650 363 Pfam PF01464 Transglycosylase SLT domain 122 218 4.4E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 NIAKO_RS27565 9de1163278782711949860095855b650 363 PANTHER PTHR21666:SF219 109 246 1.1E-34 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 PIRSF PIRSF001589 1 608 8.6E-140 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 PANTHER PTHR11772 462 570 3.5E-136 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 PANTHER PTHR11772 2 390 3.5E-136 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 Gene3D G3DSA:3.40.50.620 228 415 1.5E-69 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 Gene3D G3DSA:3.40.50.620 466 595 1.5E-69 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 PANTHER PTHR11772:SF10 462 570 3.5E-136 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 PANTHER PTHR11772:SF10 2 390 3.5E-136 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 Pfam PF00733 Asparagine synthase 247 598 1.6E-76 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 SUPERFAMILY SSF56235 1 229 4.63E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 SUPERFAMILY SSF52402 239 388 3.93E-61 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 SUPERFAMILY SSF52402 470 592 3.93E-61 T 23-04-2016 NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 Gene3D G3DSA:3.60.20.10 1 227 4.0E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 Pfam PF13537 Glutamine amidotransferase domain 49 167 5.1E-46 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain NIAKO_RS32335 fcc7448dc5185523132793d97067c254 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 551 1.2E-146 T 23-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 Pfam PF00149 Calcineurin-like phosphoesterase 1 215 4.6E-17 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 Gene3D G3DSA:3.60.21.10 167 222 2.0E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 Gene3D G3DSA:3.60.21.10 1 79 2.0E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 Gene3D G3DSA:3.60.21.10 123 125 2.0E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 PANTHER PTHR37844 1 260 5.9E-47 T 23-04-2016 NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 SUPERFAMILY SSF56300 1 118 3.8E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35310 a7f9088ccfb350823b3da2343f55c246 264 SUPERFAMILY SSF56300 150 236 3.8E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 301 463 1.9E-33 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Gene3D G3DSA:2.60.120.260 15 167 1.8E-46 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Gene3D G3DSA:2.60.40.320 168 292 2.1E-27 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Pfam PF00703 Glycosyl hydrolases family 2 186 293 1.4E-14 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 406 420 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PANTHER PTHR10066:SF71 7 503 2.2E-206 T 23-04-2016 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PANTHER PTHR10066:SF71 541 723 2.2E-206 T 23-04-2016 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 SUPERFAMILY SSF51445 301 514 1.28E-77 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 SUPERFAMILY SSF51445 545 612 1.28E-77 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PANTHER PTHR10066 7 503 2.2E-206 T 23-04-2016 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PANTHER PTHR10066 541 723 2.2E-206 T 23-04-2016 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Pfam PF16355 Domain of unknown function (DUF4982) 626 686 6.9E-21 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 SUPERFAMILY SSF49785 12 178 5.35E-46 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 SUPERFAMILY SSF49303 184 293 5.47E-19 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Gene3D G3DSA:2.60.40.1560 615 699 5.6E-23 T 23-04-2016 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 SUPERFAMILY SSF49373 696 740 5.49E-5 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 336 354 2.7E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 406 421 2.7E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 305 319 2.7E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 PRINTS PR00132 Glycosyl hydrolase family 2 signature 107 122 2.7E-14 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 25 174 4.3E-32 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Gene3D G3DSA:2.60.40.920 700 798 4.3E-5 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain NIAKO_RS17780 a84d035d4cef0871b2d2cb1429a917be 804 Gene3D G3DSA:3.20.20.80 293 612 7.0E-87 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 Gene3D G3DSA:1.10.10.10 570 606 2.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 SUPERFAMILY SSF48452 298 422 7.25E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 Pfam PF00196 Bacterial regulatory proteins, luxR family 571 605 5.6E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 Gene3D G3DSA:1.25.40.10 301 422 3.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 ProSitePatterns PS00622 LuxR-type HTH domain signature. 575 602 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 SUPERFAMILY SSF46894 559 610 6.46E-7 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 Gene3D G3DSA:1.25.40.10 55 216 1.1E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13575 26bc8939cd13939d02eaddd2dc9672fe 619 SUPERFAMILY SSF48452 59 178 4.08E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13100 a728f7d057f5c8159abd342e6e6b8739 489 Pfam PF14322 Starch-binding associating with outer membrane 38 215 8.6E-22 T 23-04-2016 NIAKO_RS13100 a728f7d057f5c8159abd342e6e6b8739 489 SUPERFAMILY SSF48452 16 486 2.28E-85 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13100 a728f7d057f5c8159abd342e6e6b8739 489 Pfam PF07980 SusD family 311 453 4.9E-24 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13100 a728f7d057f5c8159abd342e6e6b8739 489 Gene3D G3DSA:1.25.40.10 308 434 1.1E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13100 a728f7d057f5c8159abd342e6e6b8739 489 Gene3D G3DSA:1.25.40.10 195 273 1.1E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 Pfam PF16344 Domain of unknown function (DUF4974) 306 401 2.9E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 PANTHER PTHR30273:SF2 202 403 8.3E-64 T 23-04-2016 NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 PANTHER PTHR30273:SF2 2 134 8.3E-64 T 23-04-2016 NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 Pfam PF04773 FecR protein 200 295 6.9E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 PANTHER PTHR30273 202 403 8.3E-64 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS01145 ccda1454c77f892389ee5bfdd282ad4f 405 PANTHER PTHR30273 2 134 8.3E-64 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Pfam PF13715 CarboxypepD_reg-like domain 28 108 1.9E-12 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF56935 105 262 1.14E-73 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF56935 446 789 1.14E-73 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF56935 324 413 1.14E-73 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF56935 927 991 1.14E-73 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF56935 842 885 1.14E-73 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 237 1.3E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 PANTHER PTHR11532 19 443 4.6E-147 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 PANTHER PTHR11532 515 1019 4.6E-147 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.60.40.1120 28 109 1.9E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 1020 7.9E-177 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 243 8.9E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 SUPERFAMILY SSF49464 27 106 6.02E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.170.130.10 110 238 2.4E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.40.170.20 850 895 1.0E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.40.170.20 239 265 1.0E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.40.170.20 333 408 1.0E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.40.170.20 441 798 1.0E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 Gene3D G3DSA:2.40.170.20 937 1018 1.0E-37 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 PANTHER PTHR11532:SF51 19 443 4.6E-147 T 23-04-2016 NIAKO_RS24625 eb844cc12f6a30e1c55ecba9eb703c84 1021 PANTHER PTHR11532:SF51 515 1019 4.6E-147 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 SUPERFAMILY SSF56935 134 260 9.16E-73 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 SUPERFAMILY SSF56935 378 552 9.16E-73 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 SUPERFAMILY SSF56935 304 350 9.16E-73 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 SUPERFAMILY SSF56935 580 951 9.16E-73 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Gene3D G3DSA:2.170.130.10 137 239 4.5E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Gene3D G3DSA:2.60.40.1120 27 103 8.5E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 SUPERFAMILY SSF49464 26 113 2.55E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 PANTHER PTHR30069:SF11 305 401 1.6E-30 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 PANTHER PTHR30069:SF11 27 263 1.6E-30 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Gene3D G3DSA:2.40.170.20 601 951 3.0E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Gene3D G3DSA:2.40.170.20 311 566 3.0E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Gene3D G3DSA:2.40.170.20 240 259 3.0E-45 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 237 1.3E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 Pfam PF13715 CarboxypepD_reg-like domain 28 114 1.5E-17 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 PANTHER PTHR30069 305 401 1.6E-30 T 23-04-2016 NIAKO_RS20705 3d0dd5ee8f6985b4013f18b2895976ac 951 PANTHER PTHR30069 27 263 1.6E-30 T 23-04-2016 NIAKO_RS21240 04e21d52331e92f09e13e3a3d1ee7566 401 PANTHER PTHR30160:SF1 39 392 2.1E-24 T 23-04-2016 NIAKO_RS21240 04e21d52331e92f09e13e3a3d1ee7566 401 Gene3D G3DSA:3.40.50.2000 205 383 5.2E-28 T 23-04-2016 NIAKO_RS21240 04e21d52331e92f09e13e3a3d1ee7566 401 SUPERFAMILY SSF53756 43 383 1.85E-35 T 23-04-2016 NIAKO_RS21240 04e21d52331e92f09e13e3a3d1ee7566 401 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 202 354 1.0E-12 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS21240 04e21d52331e92f09e13e3a3d1ee7566 401 PANTHER PTHR30160 39 392 2.1E-24 T 23-04-2016 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PIRSF PIRSF001092 15 436 3.7E-124 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PANTHER PTHR10030 4 338 4.8E-66 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 Pfam PF01120 Alpha-L-fucosidase 27 333 2.5E-85 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PANTHER PTHR10030:SF25 4 338 4.8E-66 T 23-04-2016 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 SMART SM00812 22 377 3.8E-112 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 Gene3D G3DSA:3.20.20.80 31 335 2.0E-91 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PRINTS PR00741 Glycosyl hydrolase family 29 signature 319 341 2.7E-16 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PRINTS PR00741 Glycosyl hydrolase family 29 signature 146 165 2.7E-16 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PRINTS PR00741 Glycosyl hydrolase family 29 signature 100 116 2.7E-16 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 PRINTS PR00741 Glycosyl hydrolase family 29 signature 286 307 2.7E-16 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS18475 3d846287c0d1b24cab5a078b6fadc454 444 SUPERFAMILY SSF51445 32 336 3.79E-88 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 PANTHER PTHR30055:SF82 1 181 1.7E-18 T 23-04-2016 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.5E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 SUPERFAMILY SSF46689 2 68 6.48E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 Gene3D G3DSA:1.10.357.10 1 189 2.1E-22 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 PANTHER PTHR30055 1 181 1.7E-18 T 23-04-2016 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.5E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS21890 175d41061577f1060e4a333673e1318e 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.5E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 PANTHER PTHR11532 57 377 1.1E-136 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 PANTHER PTHR11532 500 1011 1.1E-136 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 PANTHER PTHR11532:SF57 57 377 1.1E-136 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 PANTHER PTHR11532:SF57 500 1011 1.1E-136 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 157 187 3.3E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 57 1009 3.2E-174 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.40.170.20 423 776 1.3E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.40.170.20 916 1007 1.3E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.40.170.20 185 216 1.3E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.40.170.20 299 375 1.3E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.40.170.20 852 877 1.3E-44 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 SUPERFAMILY SSF56935 926 1007 2.61E-72 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 SUPERFAMILY SSF56935 430 769 2.61E-72 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 SUPERFAMILY SSF56935 845 887 2.61E-72 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 SUPERFAMILY SSF56935 63 206 2.61E-72 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 SUPERFAMILY SSF56935 290 378 2.61E-72 T 23-04-2016 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 181 9.6E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18335 12302bc7d6c3e6efef216863be2c32fa 1011 Gene3D G3DSA:2.170.130.10 76 184 6.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 SUPERFAMILY SSF52172 5 128 1.57E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 SMART SM00448 3 118 8.2E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 Gene3D G3DSA:3.40.50.2300 2 128 6.8E-25 T 23-04-2016 NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 PANTHER PTHR26402:SF534 3 128 1.1E-18 T 23-04-2016 NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 Pfam PF00072 Response regulator receiver domain 5 118 4.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36625 27f46fa07bf01668f762cc90dc30a365 140 PANTHER PTHR26402 3 128 1.1E-18 T 23-04-2016 NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 SMART SM00382 30 217 0.0028 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 SMART SM00382 283 489 1.3E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 Pfam PF00005 ABC transporter 274 427 3.9E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 Pfam PF00005 ABC transporter 21 169 1.7E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 PANTHER PTHR24220 7 382 3.1E-81 T 23-04-2016 NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 SUPERFAMILY SSF52540 254 484 1.81E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 SUPERFAMILY SSF52540 7 227 8.04E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 Gene3D G3DSA:3.40.50.300 260 486 2.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 Gene3D G3DSA:3.40.50.300 7 227 4.4E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04320 7ccebe79649a66a3ff47d03335655365 490 PANTHER PTHR24220:SF557 7 382 3.1E-81 T 23-04-2016 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 PANTHER PTHR11908:SF68 1 276 4.3E-83 T 23-04-2016 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 SMART SM01092 179 276 1.1E-20 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 Gene3D G3DSA:3.30.465.10 58 170 4.8E-37 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 Gene3D G3DSA:3.30.43.10 1 52 1.5E-19 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 SUPERFAMILY SSF55447 177 276 2.22E-23 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 180 275 2.7E-15 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 Gene3D G3DSA:3.30.390.50 179 275 1.0E-22 T 23-04-2016 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 SUPERFAMILY SSF56176 1 170 3.55E-54 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 PANTHER PTHR11908 1 276 4.3E-83 T 23-04-2016 NIAKO_RS03880 7e2612a8b986de07a7f2d1d4c43c9847 278 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 170 1.4E-49 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NIAKO_RS18125 a473b6f7160ffde866d7861d02e90315 149 SMART SM00712 14 83 0.0039 T 23-04-2016 IPR006628 Purine-rich element binding protein family NIAKO_RS18125 a473b6f7160ffde866d7861d02e90315 149 Pfam PF11680 Protein of unknown function (DUF3276) 9 104 3.7E-33 T 23-04-2016 IPR021694 Protein of unknown function DUF3276 NIAKO_RS02025 85b48921319bce22b3547aba5218d343 483 Pfam PF13715 CarboxypepD_reg-like domain 295 367 4.2E-9 T 23-04-2016 NIAKO_RS02025 85b48921319bce22b3547aba5218d343 483 SUPERFAMILY SSF49464 293 361 3.92E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS02025 85b48921319bce22b3547aba5218d343 483 SUPERFAMILY SSF74653 424 467 6.67E-5 T 23-04-2016 NIAKO_RS02025 85b48921319bce22b3547aba5218d343 483 Gene3D G3DSA:2.60.40.1120 295 370 7.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02025 85b48921319bce22b3547aba5218d343 483 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 425 482 2.1E-5 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34300 5707cdbb1d6c8c77714ecb135f50a08c 210 Pfam PF08495 FIST N domain 28 206 1.5E-18 T 23-04-2016 IPR013702 FIST domain, N-terminal NIAKO_RS34300 5707cdbb1d6c8c77714ecb135f50a08c 210 SMART SM00897 25 209 1.4E-10 T 23-04-2016 IPR013702 FIST domain, N-terminal NIAKO_RS34150 af6ba3d6916e564f5c6a8ddee3dd961c 266 PANTHER PTHR30622:SF3 1 266 2.8E-97 T 23-04-2016 NIAKO_RS34150 af6ba3d6916e564f5c6a8ddee3dd961c 266 Pfam PF02673 Bacitracin resistance protein BacA 6 253 5.0E-74 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NIAKO_RS34150 af6ba3d6916e564f5c6a8ddee3dd961c 266 PANTHER PTHR30622 1 266 2.8E-97 T 23-04-2016 NIAKO_RS34150 af6ba3d6916e564f5c6a8ddee3dd961c 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 259 17.08 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 368 28.462 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 SMART SM00788 4 349 5.0E-13 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 Gene3D G3DSA:3.40.440.10 3 93 4.3E-37 T 23-04-2016 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 Gene3D G3DSA:3.40.440.10 166 236 4.3E-37 T 23-04-2016 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 PANTHER PTHR11846 1 226 2.8E-14 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 SUPERFAMILY SSF52540 3 300 1.03E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 PANTHER PTHR11846:SF0 1 226 2.8E-14 T 23-04-2016 NIAKO_RS18775 bc3c022dc63e770007db972efc673c95 368 Pfam PF00709 Adenylosuccinate synthetase 6 266 3.4E-47 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 Gene3D G3DSA:1.10.1740.10 11 81 1.3E-15 T 23-04-2016 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 PANTHER PTHR30173 9 185 2.9E-43 T 23-04-2016 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 Gene3D G3DSA:1.10.10.10 111 169 1.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 10 167 2.5E-45 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 SUPERFAMILY SSF88659 108 170 8.97E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 167 2.6E-26 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 Pfam PF04542 Sigma-70 region 2 17 81 1.8E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 SUPERFAMILY SSF88946 10 92 1.14E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 Pfam PF08281 Sigma-70, region 4 114 163 1.0E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19480 2edb14cbeabe5db72614bb8cf953af37 187 PANTHER PTHR30173:SF20 9 185 2.9E-43 T 23-04-2016 NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 SUPERFAMILY SSF52540 77 362 1.62E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 Gene3D G3DSA:3.40.50.300 2 213 2.8E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 PANTHER PTHR24031:SF261 2 372 8.7E-181 T 23-04-2016 NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 Pfam PF00271 Helicase conserved C-terminal domain 238 341 2.0E-26 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 SMART SM00490 260 341 3.1E-33 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 PANTHER PTHR24031 2 372 8.7E-181 T 23-04-2016 NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 Pfam PF00270 DEAD/DEAH box helicase 25 195 8.9E-53 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 Gene3D G3DSA:3.40.50.300 214 371 5.2E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08235 febd7781b32c5f87abbe73f7574a8f01 419 SMART SM00487 20 224 6.4E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 SUPERFAMILY SSF50630 197 294 3.0E-6 T 23-04-2016 IPR021109 Aspartic peptidase domain NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 Pfam PF13650 Aspartyl protease 57 143 2.9E-9 T 23-04-2016 NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 Pfam PF13650 Aspartyl protease 187 284 1.0E-10 T 23-04-2016 NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 SUPERFAMILY SSF50156 316 393 4.07E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 SMART SM00228 317 383 4.9E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 SUPERFAMILY SSF50630 41 147 2.13E-5 T 23-04-2016 IPR021109 Aspartic peptidase domain NIAKO_RS31725 dc0c8bf4e79558fbebe40ce094575b54 399 Gene3D G3DSA:2.30.42.10 312 392 1.3E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS29660 5f65990d7e8af4bb8f990da55fbc2b56 101 Pfam PF14114 Domain of unknown function (DUF4286) 3 99 5.2E-30 T 23-04-2016 IPR025563 Protein of unknown function DUF4286 NIAKO_RS26595 8425cf78fd2671c24c4e3f84fb971705 824 SUPERFAMILY SSF56935 210 780 1.56E-38 T 23-04-2016 NIAKO_RS26595 8425cf78fd2671c24c4e3f84fb971705 824 Pfam PF13715 CarboxypepD_reg-like domain 101 170 1.8E-8 T 23-04-2016 NIAKO_RS26595 8425cf78fd2671c24c4e3f84fb971705 824 Gene3D G3DSA:2.60.40.1120 100 171 2.0E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS26595 8425cf78fd2671c24c4e3f84fb971705 824 SUPERFAMILY SSF49464 97 172 3.4E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Gene3D G3DSA:4.10.1080.10 236 370 4.8E-17 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF13568 Outer membrane protein beta-barrel domain 22 206 2.6E-13 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF02412 Thrombospondin type 3 repeat 263 280 0.017 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF02412 Thrombospondin type 3 repeat 321 340 0.024 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF02412 Thrombospondin type 3 repeat 350 367 0.0011 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF02412 Thrombospondin type 3 repeat 235 253 6.5E-4 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Pfam PF00691 OmpA family 394 489 3.4E-23 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 Gene3D G3DSA:3.30.1330.60 374 495 3.3E-38 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 SUPERFAMILY SSF103647 234 368 7.85E-10 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PANTHER PTHR30128 393 495 7.4E-43 T 23-04-2016 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PRINTS PR01021 OMPA domain signature 440 456 3.42E-8 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PRINTS PR01021 OMPA domain signature 425 440 3.42E-8 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 458 477 6.47E-9 T 23-04-2016 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 478 498 6.47E-9 T 23-04-2016 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 440 457 6.47E-9 T 23-04-2016 NIAKO_RS36480 61585c181497b533e7a11efce9c5e9d6 498 SUPERFAMILY SSF103088 375 494 4.45E-35 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PANTHER PTHR20861 2 308 1.4E-81 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 SUPERFAMILY SSF55060 172 287 3.6E-25 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 Gene3D G3DSA:3.30.230.10 8 156 9.9E-44 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 Hamap MF_00384 Homoserine kinase [thrB]. 8 308 28.413 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 Gene3D G3DSA:3.30.70.890 169 298 2.8E-32 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 91 102 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 TIGRFAM TIGR00191 thrB: homoserine kinase 8 308 3.5E-66 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 Pfam PF00288 GHMP kinases N terminal domain 85 151 4.0E-14 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PIRSF PIRSF000676 4 310 2.7E-77 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 SUPERFAMILY SSF54211 8 157 5.46E-29 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PANTHER PTHR20861:SF1 2 308 1.4E-81 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 Pfam PF08544 GHMP kinases C terminal 212 282 1.0E-10 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PRINTS PR00958 Homoserine kinase signature 254 269 5.5E-25 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PRINTS PR00958 Homoserine kinase signature 138 151 5.5E-25 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PRINTS PR00958 Homoserine kinase signature 175 192 5.5E-25 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PRINTS PR00958 Homoserine kinase signature 15 30 5.5E-25 T 23-04-2016 NIAKO_RS00555 b92aa5661259425d79e2bfb68fcf1063 312 PRINTS PR00958 Homoserine kinase signature 98 113 5.5E-25 T 23-04-2016 NIAKO_RS20775 d9d518fca42dce9b23df45168f3c6087 426 SUPERFAMILY SSF56954 10 421 1.7E-32 T 23-04-2016 NIAKO_RS20775 d9d518fca42dce9b23df45168f3c6087 426 Pfam PF02321 Outer membrane efflux protein 275 424 1.5E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS20775 d9d518fca42dce9b23df45168f3c6087 426 Gene3D G3DSA:1.20.1600.10 34 422 2.7E-21 T 23-04-2016 NIAKO_RS17015 003da89bec4d6b3d12a0cadc455c2ce9 104 Gene3D G3DSA:3.30.70.330 2 94 7.7E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS17015 003da89bec4d6b3d12a0cadc455c2ce9 104 SMART SM00360 2 75 3.3E-30 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS17015 003da89bec4d6b3d12a0cadc455c2ce9 104 PANTHER PTHR24012 1 94 1.0E-34 T 23-04-2016 NIAKO_RS17015 003da89bec4d6b3d12a0cadc455c2ce9 104 SUPERFAMILY SSF54928 2 102 2.15E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS17015 003da89bec4d6b3d12a0cadc455c2ce9 104 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 1.9E-24 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 PANTHER PTHR11019:SF61 228 333 2.6E-32 T 23-04-2016 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 Pfam PF12833 Helix-turn-helix domain 256 331 2.0E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 SUPERFAMILY SSF46689 286 332 1.79E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 Gene3D G3DSA:1.10.10.60 228 285 5.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 Gene3D G3DSA:1.10.10.60 286 331 1.1E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 SUPERFAMILY SSF46689 234 283 7.08E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 SMART SM00342 250 332 1.1E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 PANTHER PTHR11019 228 333 2.6E-32 T 23-04-2016 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 287 328 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS19230 00a9fe86ff6b8a99c3d3c014a1b1f4f9 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 SMART SM00448 2 110 1.3E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 Gene3D G3DSA:2.40.50.40 131 197 9.1E-20 T 23-04-2016 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 Pfam PF00072 Response regulator receiver domain 6 110 4.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 Gene3D G3DSA:3.40.50.2300 1 116 8.2E-24 T 23-04-2016 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 Pfam PF04397 LytTr DNA-binding domain 139 227 1.2E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 PANTHER PTHR26402 2 113 3.9E-24 T 23-04-2016 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 SMART SM00850 137 228 3.3E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 SUPERFAMILY SSF52172 2 115 3.7E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS12125 a3a92514ce2ee5446d8d48943213df07 230 PANTHER PTHR26402:SF522 2 113 3.9E-24 T 23-04-2016 NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 PANTHER PTHR24567 21 194 1.7E-24 T 23-04-2016 NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 SUPERFAMILY SSF51206 19 151 1.06E-24 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 SMART SM00100 20 137 5.9E-4 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 Pfam PF00027 Cyclic nucleotide-binding domain 39 126 2.3E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 Gene3D G3DSA:2.60.120.10 14 164 1.2E-35 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS08660 177553fdcb9c42a366ef4e60dd0f8a6a 197 PANTHER PTHR24567:SF33 21 194 1.7E-24 T 23-04-2016 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 SMART SM00342 215 298 1.0E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 PANTHER PTHR11019 26 301 1.1E-27 T 23-04-2016 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 SUPERFAMILY SSF46689 253 301 3.05E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 Pfam PF12833 Helix-turn-helix domain 221 299 1.8E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 PANTHER PTHR11019:SF50 26 301 1.1E-27 T 23-04-2016 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 Gene3D G3DSA:1.10.10.60 216 249 4.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 Gene3D G3DSA:1.10.10.60 253 300 3.9E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 3.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS02995 ebcb47a8265daac85ed138b8065b2569 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 3.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS06070 0d23af3895d70630cea86a1825549dd9 951 Gene3D G3DSA:2.60.40.10 781 860 1.2E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06070 0d23af3895d70630cea86a1825549dd9 951 Pfam PF13573 SprB repeat 69 91 1.4E-4 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS16640 d42602d642bdcf42b0c8cd87d8518626 471 SUPERFAMILY SSF116734 280 454 5.4E-25 T 23-04-2016 NIAKO_RS16640 d42602d642bdcf42b0c8cd87d8518626 471 Pfam PF01420 Type I restriction modification DNA specificity domain 39 216 9.6E-14 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 NIAKO_RS16640 d42602d642bdcf42b0c8cd87d8518626 471 Pfam PF01420 Type I restriction modification DNA specificity domain 342 452 3.8E-8 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 NIAKO_RS16640 d42602d642bdcf42b0c8cd87d8518626 471 SUPERFAMILY SSF116734 39 224 6.54E-31 T 23-04-2016 NIAKO_RS16640 d42602d642bdcf42b0c8cd87d8518626 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 74 86 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 SMART SM00448 5 118 2.3E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 Pfam PF00072 Response regulator receiver domain 7 118 2.7E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 SUPERFAMILY SSF46894 128 224 6.12E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 Gene3D G3DSA:1.10.10.10 128 224 5.3E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 Gene3D G3DSA:3.40.50.2300 3 127 4.4E-41 T 23-04-2016 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 223 3.2E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 PANTHER PTHR26402 5 224 3.9E-85 T 23-04-2016 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 SMART SM00862 152 223 9.6E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 PANTHER PTHR26402:SF50 5 224 3.9E-85 T 23-04-2016 NIAKO_RS33965 cf1cf1498695d1157ee0ff070f90d33d 225 SUPERFAMILY SSF52172 3 132 4.98E-41 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 2.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 2.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 Gene3D G3DSA:1.10.10.60 211 261 1.4E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 SMART SM00342 174 258 5.4E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 SUPERFAMILY SSF46689 211 262 1.52E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 PANTHER PTHR11019 169 266 1.4E-18 T 23-04-2016 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 Pfam PF12833 Helix-turn-helix domain 182 259 1.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS14645 ddaafbe3fae136ca36430c36367afbff 274 PANTHER PTHR11019:SF126 169 266 1.4E-18 T 23-04-2016 NIAKO_RS37200 269bb8e6fe6bceea4c1134bc7f6dd7d7 286 Pfam PF00535 Glycosyl transferase family 2 5 116 2.0E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS37200 269bb8e6fe6bceea4c1134bc7f6dd7d7 286 Gene3D G3DSA:3.90.550.10 2 188 8.4E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37200 269bb8e6fe6bceea4c1134bc7f6dd7d7 286 SUPERFAMILY SSF53448 2 250 1.52E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37200 269bb8e6fe6bceea4c1134bc7f6dd7d7 286 PANTHER PTHR22916 7 270 7.8E-28 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305 355 645 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305 1115 1231 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305 687 1098 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 627 666 6.7E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 999 1040 0.0017 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 751 785 1.3E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 584 624 6.9E-5 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 508 540 2.3E-5 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 877 916 3.8E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 SUPERFAMILY SSF69304 936 1063 6.67E-5 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 SUPERFAMILY SSF69304 568 672 6.67E-5 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 SUPERFAMILY SSF69304 741 792 6.67E-5 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305:SF6 355 645 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305:SF6 1115 1231 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 PANTHER PTHR32305:SF6 687 1098 1.4E-73 T 23-04-2016 NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Pfam PF05593 RHS Repeat 521 557 5.1E-5 T 23-04-2016 IPR031325 RHS repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Pfam PF05593 RHS Repeat 751 785 1.5E-5 T 23-04-2016 IPR031325 RHS repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Pfam PF05593 RHS Repeat 1023 1055 2.2E-5 T 23-04-2016 IPR031325 RHS repeat NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Gene3D G3DSA:2.120.10.30 907 908 1.8E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Gene3D G3DSA:2.120.10.30 990 1026 1.8E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Gene3D G3DSA:2.120.10.30 533 670 1.8E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 Gene3D G3DSA:2.120.10.30 721 806 1.8E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS06885 9081ed0d96e1aa228b72aad22e078601 1366 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1157 1231 8.9E-20 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 PANTHER PTHR11361:SF86 5 862 0.0 T 23-04-2016 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 PIRSF PIRSF037677 2 857 1.2E-165 T 23-04-2016 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 869 1.2E-277 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SUPERFAMILY SSF53150 115 268 2.35E-41 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SMART SM00534 611 799 6.3E-106 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Pfam PF05190 MutS family domain IV 429 519 1.3E-28 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Pfam PF01624 MutS domain I 9 120 3.3E-39 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Pfam PF05192 MutS domain III 272 560 4.8E-38 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 8 864 23.788 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Gene3D G3DSA:3.40.1170.10 4 122 5.8E-46 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Gene3D G3DSA:1.10.1420.10 265 469 3.6E-47 T 23-04-2016 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Pfam PF00488 MutS domain V 614 802 1.6E-78 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 PANTHER PTHR11361 5 862 0.0 T 23-04-2016 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Gene3D G3DSA:3.40.50.300 570 803 1.4E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SUPERFAMILY SSF48334 269 566 3.14E-84 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SUPERFAMILY SSF52540 568 803 5.16E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SUPERFAMILY SSF55271 6 115 4.45E-39 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 SMART SM00533 284 592 9.6E-91 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Gene3D G3DSA:3.30.420.110 127 258 1.7E-37 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NIAKO_RS21755 aa828db947ae5a1600cb67b05734febe 873 Pfam PF05188 MutS domain II 129 254 1.3E-19 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NIAKO_RS00985 278a45108f76d6395a8d67387dfa51c1 456 Pfam PF14322 Starch-binding associating with outer membrane 25 228 8.5E-40 T 23-04-2016 NIAKO_RS00985 278a45108f76d6395a8d67387dfa51c1 456 Pfam PF07980 SusD family 338 410 8.0E-7 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS00985 278a45108f76d6395a8d67387dfa51c1 456 Gene3D G3DSA:1.25.40.10 212 396 1.3E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00985 278a45108f76d6395a8d67387dfa51c1 456 SUPERFAMILY SSF48452 19 448 2.93E-61 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 Pfam PF02780 Transketolase, C-terminal domain 199 320 5.2E-39 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 SUPERFAMILY SSF52518 9 190 1.85E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 Gene3D G3DSA:3.40.50.920 200 328 1.7E-42 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 SUPERFAMILY SSF52922 195 329 1.13E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 PANTHER PTHR11624 8 328 2.5E-130 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 Pfam PF02779 Transketolase, pyrimidine binding domain 9 183 8.9E-39 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 SMART SM00861 9 184 2.9E-53 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS11295 5c26235daec954d65d37956711ef8582 331 Gene3D G3DSA:3.40.50.970 8 199 1.0E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS18500 4c8b905bb14475286a67cad80681fc53 129 PANTHER PTHR34389 8 127 2.9E-24 T 23-04-2016 NIAKO_RS18500 4c8b905bb14475286a67cad80681fc53 129 SUPERFAMILY SSF54909 20 127 1.93E-23 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS18500 4c8b905bb14475286a67cad80681fc53 129 Pfam PF05336 Domain of unknown function (DUF718) 20 127 4.9E-31 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 NIAKO_RS18500 4c8b905bb14475286a67cad80681fc53 129 PANTHER PTHR34389:SF1 8 127 2.9E-24 T 23-04-2016 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 SMART SM00361 2 75 0.0022 T 23-04-2016 IPR003954 RNA recognition motif domain, eukaryote GO:0003676 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 SUPERFAMILY SSF54928 2 101 3.76E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 SMART SM00360 2 75 1.4E-28 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 1.4E-23 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 Gene3D G3DSA:3.30.70.330 2 92 2.3E-31 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS08300 61b68d3ce0fa25489b7c70e7ad785904 105 PANTHER PTHR24012 1 100 7.3E-33 T 23-04-2016 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Pfam PF05199 GMC oxidoreductase 435 558 1.3E-19 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Pfam PF00732 GMC oxidoreductase 108 345 2.4E-10 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 PANTHER PTHR11552:SF139 119 570 8.9E-58 T 23-04-2016 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 PANTHER PTHR11552:SF139 21 103 8.9E-58 T 23-04-2016 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 SUPERFAMILY SSF54373 361 507 1.73E-42 T 23-04-2016 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Gene3D G3DSA:3.50.50.60 239 347 9.4E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Gene3D G3DSA:3.50.50.60 17 170 9.4E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Gene3D G3DSA:3.50.50.60 457 458 9.4E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 Gene3D G3DSA:3.50.50.60 497 564 9.4E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 SUPERFAMILY SSF51905 506 567 9.89E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 SUPERFAMILY SSF51905 16 79 9.89E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 SUPERFAMILY SSF51905 110 350 9.89E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 PANTHER PTHR11552 119 570 8.9E-58 T 23-04-2016 NIAKO_RS30770 51e05e5d5558f4bfd0296281f2317632 571 PANTHER PTHR11552 21 103 8.9E-58 T 23-04-2016 NIAKO_RS19205 dc8d094c6d5ce9af07546829be73c522 157 SUPERFAMILY SSF69118 12 141 3.09E-38 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS19205 dc8d094c6d5ce9af07546829be73c522 157 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 38 77 2.5E-12 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS19205 dc8d094c6d5ce9af07546829be73c522 157 Gene3D G3DSA:1.20.1290.10 2 141 1.6E-45 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS19205 dc8d094c6d5ce9af07546829be73c522 157 Pfam PF02627 Carboxymuconolactone decarboxylase family 16 94 6.0E-12 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.1E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.1E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.1E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 Gene3D G3DSA:1.10.10.10 162 215 2.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 PANTHER PTHR26402:SF458 7 218 1.9E-52 T 23-04-2016 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 SUPERFAMILY SSF52172 6 136 4.13E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 SMART SM00421 153 210 5.6E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 Pfam PF00072 Response regulator receiver domain 9 121 5.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 6.1E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 PANTHER PTHR26402 7 218 1.9E-52 T 23-04-2016 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 Gene3D G3DSA:3.40.50.2300 5 161 6.0E-34 T 23-04-2016 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 SMART SM00448 7 121 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28455 7cdaeaa3d72584f1d2eb55d56d8f79d4 218 SUPERFAMILY SSF46894 149 216 6.8E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS20605 02ae0e8f7ea47042c352b84cc15e0d34 199 SUPERFAMILY SSF109604 1 196 1.12E-26 T 23-04-2016 NIAKO_RS20605 02ae0e8f7ea47042c352b84cc15e0d34 199 Gene3D G3DSA:1.10.3210.10 5 133 4.6E-14 T 23-04-2016 IPR006674 HD domain NIAKO_RS20605 02ae0e8f7ea47042c352b84cc15e0d34 199 SMART SM00471 26 141 3.3E-4 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS01750 2618c5817a31bae126d060b4115633cd 93 PANTHER PTHR31435 1 93 1.7E-19 T 23-04-2016 NIAKO_RS01750 2618c5817a31bae126d060b4115633cd 93 Gene3D G3DSA:3.40.630.30 3 93 1.0E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01750 2618c5817a31bae126d060b4115633cd 93 SUPERFAMILY SSF55729 3 92 2.62E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01750 2618c5817a31bae126d060b4115633cd 93 PANTHER PTHR31435:SF3 1 93 1.7E-19 T 23-04-2016 NIAKO_RS01750 2618c5817a31bae126d060b4115633cd 93 Pfam PF14542 GCN5-related N-acetyl-transferase 14 91 5.2E-21 T 23-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase NIAKO_RS09430 132e125c4db87733b4ffa05b59276ba9 608 Gene3D G3DSA:1.10.390.10 390 522 4.2E-10 T 23-04-2016 NIAKO_RS09430 132e125c4db87733b4ffa05b59276ba9 608 SUPERFAMILY SSF55486 310 518 2.12E-19 T 23-04-2016 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 Gene3D G3DSA:2.40.50.140 1 124 1.4E-65 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.461 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.7E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.4E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PANTHER PTHR11652 1 116 2.6E-74 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 SUPERFAMILY SSF50249 2 123 3.68E-53 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 PIRSF PIRSF002133 1 124 9.5E-56 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS23065 1fd6f1946b6ff35d978ce36fb21299c3 126 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.5E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 PANTHER PTHR38478 4 787 2.5E-131 T 23-04-2016 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 SUPERFAMILY SSF55486 322 543 2.45E-23 T 23-04-2016 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 Pfam PF16313 Met-zincin 448 760 8.3E-110 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 Gene3D G3DSA:3.40.390.10 277 542 9.2E-16 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 Pfam PF17148 Domain of unknown function (DUF5117) 113 316 2.4E-52 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS15150 01effb22bf9768cb2bc93ec92177f487 860 Pfam PF17162 Domain of unknown function (DUF5118) 56 103 2.3E-19 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 SUPERFAMILY SSF88659 93 150 3.18E-7 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 Gene3D G3DSA:1.10.1740.10 7 66 9.8E-8 T 23-04-2016 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 PANTHER PTHR30173:SF25 11 277 3.8E-53 T 23-04-2016 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 Pfam PF04542 Sigma-70 region 2 9 64 7.7E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 Gene3D G3DSA:1.10.10.10 101 148 2.9E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 SUPERFAMILY SSF88946 7 63 3.92E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 PANTHER PTHR30173 11 277 3.8E-53 T 23-04-2016 NIAKO_RS16820 ec5b6013d1fe0c094f15049f4a2c6449 282 Pfam PF08281 Sigma-70, region 4 100 148 1.6E-6 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS14010 5f6277e8c364c5b5c4f31140abf4a432 610 PANTHER PTHR31616 2 608 1.7E-166 T 23-04-2016 NIAKO_RS14010 5f6277e8c364c5b5c4f31140abf4a432 610 SUPERFAMILY SSF48208 208 599 6.8E-97 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS14010 5f6277e8c364c5b5c4f31140abf4a432 610 PANTHER PTHR31616:SF0 2 608 1.7E-166 T 23-04-2016 NIAKO_RS14010 5f6277e8c364c5b5c4f31140abf4a432 610 Gene3D G3DSA:1.50.10.10 221 607 4.3E-94 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS14010 5f6277e8c364c5b5c4f31140abf4a432 610 Pfam PF00723 Glycosyl hydrolases family 15 228 539 2.2E-42 T 23-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 PANTHER PTHR10030 35 463 1.1E-60 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 PIRSF PIRSF001092 3 463 5.2E-117 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 SUPERFAMILY SSF51445 28 367 8.21E-95 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 Pfam PF01120 Alpha-L-fucosidase 14 364 7.4E-102 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 Gene3D G3DSA:3.20.20.80 32 367 3.0E-99 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 376 463 7.9E-8 T 23-04-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 SMART SM00812 21 407 2.7E-110 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 PRINTS PR00741 Glycosyl hydrolase family 29 signature 350 372 1.4E-18 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 PRINTS PR00741 Glycosyl hydrolase family 29 signature 317 338 1.4E-18 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17170 e89334a085f03baa30125ab9a5e5ca32 463 PRINTS PR00741 Glycosyl hydrolase family 29 signature 113 129 1.4E-18 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 Gene3D G3DSA:3.40.50.1000 1 23 1.8E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 Gene3D G3DSA:3.40.50.1000 90 221 1.8E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 SUPERFAMILY SSF56784 1 221 2.8E-46 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 PANTHER PTHR18901 1 221 2.3E-43 T 23-04-2016 NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 4.4E-22 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS13340 f26bf479036069dd2ec7a64bc0d616c4 221 PANTHER PTHR18901:SF45 1 221 2.3E-43 T 23-04-2016 NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 Pfam PF16490 Putative oxidoreductase C terminal domain 177 447 1.3E-126 T 23-04-2016 IPR032459 Putative oxidoreductase, C-terminal NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 PANTHER PTHR22604:SF14 98 247 4.9E-22 T 23-04-2016 NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 86 159 2.4E-7 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 SUPERFAMILY SSF51735 229 245 1.58E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 SUPERFAMILY SSF51735 98 187 1.58E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 PANTHER PTHR22604 98 247 4.9E-22 T 23-04-2016 NIAKO_RS09415 99e926d0b9b1cfa6c46f1cb6f158b770 452 Gene3D G3DSA:3.40.50.720 90 247 1.5E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21625 58cebcdb077d15e7feef3c3cf90a5ff6 554 Gene3D G3DSA:2.40.170.20 100 551 5.0E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS21625 58cebcdb077d15e7feef3c3cf90a5ff6 554 SUPERFAMILY SSF56935 233 551 2.56E-17 T 23-04-2016 NIAKO_RS21625 58cebcdb077d15e7feef3c3cf90a5ff6 554 SUPERFAMILY SSF56935 98 205 2.56E-17 T 23-04-2016 NIAKO_RS37305 182c017c36271e0d28241a4d9c8d1b75 87 SUPERFAMILY SSF57783 11 77 1.87E-16 T 23-04-2016 NIAKO_RS37305 182c017c36271e0d28241a4d9c8d1b75 87 Gene3D G3DSA:3.90.580.10 12 82 2.5E-16 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS37305 182c017c36271e0d28241a4d9c8d1b75 87 Pfam PF01807 CHC2 zinc finger 32 84 2.0E-9 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NIAKO_RS16660 e1c699f0bb34d02e4314d777c83c0428 92 PANTHER PTHR40266 1 92 4.9E-18 T 23-04-2016 NIAKO_RS16660 e1c699f0bb34d02e4314d777c83c0428 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 92 3.3E-25 T 23-04-2016 IPR007711 Toxin HigB-1 NIAKO_RS16660 e1c699f0bb34d02e4314d777c83c0428 92 SUPERFAMILY SSF143011 1 92 2.09E-16 T 23-04-2016 NIAKO_RS16660 e1c699f0bb34d02e4314d777c83c0428 92 PANTHER PTHR40266:SF2 1 92 4.9E-18 T 23-04-2016 NIAKO_RS07905 c428dcd8b976ec1c61abbbf310e490d8 111 Pfam PF01588 Putative tRNA binding domain 14 107 2.6E-13 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 NIAKO_RS07905 c428dcd8b976ec1c61abbbf310e490d8 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 110 6.7E-47 T 23-04-2016 IPR008231 Probable chaperone CsaA NIAKO_RS07905 c428dcd8b976ec1c61abbbf310e490d8 111 Gene3D G3DSA:2.40.50.140 2 110 1.5E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07905 c428dcd8b976ec1c61abbbf310e490d8 111 SUPERFAMILY SSF50249 3 110 8.32E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS07905 c428dcd8b976ec1c61abbbf310e490d8 111 PANTHER PTHR11586 6 110 3.5E-26 T 23-04-2016 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PANTHER PTHR10381:SF22 38 240 1.2E-95 T 23-04-2016 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 Pfam PF00574 Clp protease 53 227 2.7E-73 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PANTHER PTHR10381 38 240 1.2E-95 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 SUPERFAMILY SSF52096 49 230 3.26E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 39 229 37.785 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PRINTS PR00127 Clp protease catalytic subunit P signature 126 143 1.1E-43 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PRINTS PR00127 Clp protease catalytic subunit P signature 204 223 1.1E-43 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PRINTS PR00127 Clp protease catalytic subunit P signature 147 166 1.1E-43 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PRINTS PR00127 Clp protease catalytic subunit P signature 55 70 1.1E-43 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 PRINTS PR00127 Clp protease catalytic subunit P signature 95 115 1.1E-43 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS19670 6b7efa538b9c05324a54a450a9132c65 240 Gene3D G3DSA:3.90.226.10 53 230 1.3E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 Gene3D G3DSA:2.160.20.10 69 426 1.3E-49 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 SUPERFAMILY SSF51126 69 336 6.49E-60 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 SUPERFAMILY SSF51126 363 428 6.49E-60 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 PANTHER PTHR31683:SF9 82 416 2.1E-125 T 23-04-2016 NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 PANTHER PTHR31683 82 416 2.1E-125 T 23-04-2016 NIAKO_RS12410 9a82974167ab9aaa3c20c27be5035b67 543 Gene3D G3DSA:4.10.1080.10 487 533 2.9E-4 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 PANTHER PTHR34134 8 127 4.1E-27 T 23-04-2016 NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 PANTHER PTHR34134:SF1 8 127 4.1E-27 T 23-04-2016 NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 Gene3D G3DSA:1.10.10.10 5 82 2.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 Pfam PF03965 Penicillinase repressor 10 122 3.9E-28 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 PIRSF PIRSF019455 1 127 2.3E-24 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS05790 b561b6a162c9343c13b6f1b76f3ae93e 127 SUPERFAMILY SSF46785 7 126 3.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09500 a0d497495ace97670ecd262a271d9f62 257 Pfam PF07883 Cupin domain 67 129 4.9E-10 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS09500 a0d497495ace97670ecd262a271d9f62 257 Pfam PF07883 Cupin domain 191 252 1.2E-11 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS09500 a0d497495ace97670ecd262a271d9f62 257 Gene3D G3DSA:2.60.120.10 164 255 2.5E-17 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS09500 a0d497495ace97670ecd262a271d9f62 257 Gene3D G3DSA:2.60.120.10 53 131 4.0E-15 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS09500 a0d497495ace97670ecd262a271d9f62 257 SUPERFAMILY SSF51182 55 255 9.57E-24 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 Gene3D G3DSA:3.10.180.10 10 164 3.6E-35 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 PANTHER PTHR10374 1 163 3.4E-45 T 23-04-2016 NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 PANTHER PTHR10374:SF14 1 163 3.4E-45 T 23-04-2016 NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 129 7.6E-14 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 ProSitePatterns PS00934 Glyoxalase I signature 1. 16 37 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 NIAKO_RS16480 634569b010dbd501e6819952a63b2fa6 166 SUPERFAMILY SSF54593 6 163 1.61E-48 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS21375 a39d75101c2c290d1229964b6b8d27cf 145 Pfam PF13279 Thioesterase-like superfamily 10 126 2.4E-14 T 23-04-2016 NIAKO_RS21375 a39d75101c2c290d1229964b6b8d27cf 145 PANTHER PTHR31793 4 143 7.4E-14 T 23-04-2016 NIAKO_RS21375 a39d75101c2c290d1229964b6b8d27cf 145 SUPERFAMILY SSF54637 3 139 1.42E-24 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS21375 a39d75101c2c290d1229964b6b8d27cf 145 Gene3D G3DSA:3.10.129.10 4 134 1.6E-20 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 SUPERFAMILY SSF53850 239 374 1.56E-27 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Gene3D G3DSA:3.40.190.120 239 313 4.4E-19 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 241 371 2.2E-25 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 386 516 6.4E-21 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 208 8.2E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 SUPERFAMILY SSF161098 15 201 1.85E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 PANTHER PTHR30177 5 375 2.5E-122 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Gene3D G3DSA:3.40.190.10 319 374 1.8E-13 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Gene3D G3DSA:3.40.190.10 381 505 1.3E-39 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 Gene3D G3DSA:1.10.3720.10 10 201 2.2E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 PANTHER PTHR30177:SF4 5 375 2.5E-122 T 23-04-2016 NIAKO_RS20625 289c416d4fda01e4723a6d780765ba93 521 SUPERFAMILY SSF53850 386 518 2.03E-23 T 23-04-2016 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 PANTHER PTHR30461 5 196 9.9E-20 T 23-04-2016 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 Pfam PF00239 Resolvase, N terminal domain 5 146 9.2E-23 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 SUPERFAMILY SSF53041 5 146 1.06E-22 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 SMART SM00857 5 147 2.6E-32 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 Gene3D G3DSA:3.40.50.1390 6 121 2.6E-17 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NIAKO_RS16795 dfdf524980b6eac13f6a3e2511575919 227 Gene3D G3DSA:1.20.5.40 122 146 1.4E-9 T 23-04-2016 NIAKO_RS25590 b3fbb33b27cd3512d3d711ad6eca34dc 259 PANTHER PTHR12729 10 224 8.7E-59 T 23-04-2016 IPR007537 tRNAHis guanylyltransferase Thg1 GO:0000287|GO:0006400|GO:0008193 NIAKO_RS25590 b3fbb33b27cd3512d3d711ad6eca34dc 259 Pfam PF04446 tRNAHis guanylyltransferase 10 130 1.9E-30 T 23-04-2016 IPR024956 tRNAHis guanylyltransferase catalytic domain GO:0000287|GO:0006400|GO:0008193 NIAKO_RS25590 b3fbb33b27cd3512d3d711ad6eca34dc 259 Pfam PF14413 Thg1 C terminal domain 134 216 5.0E-17 T 23-04-2016 IPR025845 Thg1 C-terminal domain NIAKO_RS26135 e027e816d3462ed6d3dd1d89acd0bdf7 495 SUPERFAMILY SSF57802 439 490 3.53E-15 T 23-04-2016 NIAKO_RS26135 e027e816d3462ed6d3dd1d89acd0bdf7 495 Gene3D G3DSA:2.20.28.10 440 489 5.2E-19 T 23-04-2016 IPR004039 Rubredoxin-type fold NIAKO_RS26135 e027e816d3462ed6d3dd1d89acd0bdf7 495 Pfam PF00301 Rubredoxin 440 485 9.6E-16 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Pfam PF07715 TonB-dependent Receptor Plug Domain 227 347 8.1E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Gene3D G3DSA:2.60.40.1120 136 221 2.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Gene3D G3DSA:2.170.130.10 227 349 1.8E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Gene3D G3DSA:2.40.170.20 350 1010 5.1E-85 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 SUPERFAMILY SSF49464 135 211 2.49E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 SUPERFAMILY SSF56935 442 855 6.96E-94 T 23-04-2016 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 SUPERFAMILY SSF56935 887 1010 6.96E-94 T 23-04-2016 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 SUPERFAMILY SSF56935 214 413 6.96E-94 T 23-04-2016 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Pfam PF13715 CarboxypepD_reg-like domain 136 216 1.0E-15 T 23-04-2016 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 PANTHER PTHR30069 205 958 2.9E-105 T 23-04-2016 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 Pfam PF00593 TonB dependent receptor 676 987 9.0E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12900 a0ebcd4789f96bccbd5ff8220f260583 1010 PANTHER PTHR30069:SF4 205 958 2.9E-105 T 23-04-2016 NIAKO_RS04830 59462c903301768f5795e60446b14f1e 294 Gene3D G3DSA:3.40.50.720 1 239 6.6E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04830 59462c903301768f5795e60446b14f1e 294 SUPERFAMILY SSF51735 1 293 8.2E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04830 59462c903301768f5795e60446b14f1e 294 PANTHER PTHR10491:SF4 1 294 1.1E-89 T 23-04-2016 NIAKO_RS04830 59462c903301768f5795e60446b14f1e 294 PANTHER PTHR10491 1 294 1.1E-89 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NIAKO_RS04830 59462c903301768f5795e60446b14f1e 294 Pfam PF04321 RmlD substrate binding domain 1 292 5.4E-65 T 23-04-2016 IPR029903 RmlD-like substrate binding domain NIAKO_RS33240 073bce7b552b6fb4c7f1a0c9a8070d79 185 SUPERFAMILY SSF53335 15 172 1.51E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33240 073bce7b552b6fb4c7f1a0c9a8070d79 185 Pfam PF13578 Methyltransferase domain 66 128 9.1E-10 T 23-04-2016 NIAKO_RS33240 073bce7b552b6fb4c7f1a0c9a8070d79 185 Gene3D G3DSA:3.40.50.150 20 176 4.9E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS31630 770a2c603191992a96ac8a3456759467 160 SUPERFAMILY SSF55961 1 147 1.82E-19 T 23-04-2016 NIAKO_RS31630 770a2c603191992a96ac8a3456759467 160 Gene3D G3DSA:3.30.530.20 5 124 8.6E-4 T 23-04-2016 IPR023393 START-like domain NIAKO_RS22800 15276ee1190b3b6ebac4144a8da64882 119 Pfam PF13564 DoxX-like family 30 107 1.9E-12 T 23-04-2016 IPR032808 DoxX family NIAKO_RS03285 41eb58f125eb571f1ccbdcb2fcf58c5f 166 Pfam PF00583 Acetyltransferase (GNAT) family 67 142 3.7E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS03285 41eb58f125eb571f1ccbdcb2fcf58c5f 166 PANTHER PTHR13947 17 163 1.1E-26 T 23-04-2016 NIAKO_RS03285 41eb58f125eb571f1ccbdcb2fcf58c5f 166 PANTHER PTHR13947:SF16 17 163 1.1E-26 T 23-04-2016 NIAKO_RS03285 41eb58f125eb571f1ccbdcb2fcf58c5f 166 Gene3D G3DSA:3.40.630.30 8 160 9.0E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS03285 41eb58f125eb571f1ccbdcb2fcf58c5f 166 SUPERFAMILY SSF55729 15 163 1.1E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 Pfam PF16344 Domain of unknown function (DUF4974) 302 398 3.7E-20 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 PANTHER PTHR30273:SF2 193 399 1.9E-67 T 23-04-2016 NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 PANTHER PTHR30273:SF2 1 121 1.9E-67 T 23-04-2016 NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 Pfam PF04773 FecR protein 195 286 4.4E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 PANTHER PTHR30273 193 399 1.9E-67 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS29265 106c2fa2c4affb5e6a5e5c82aa6b64c3 414 PANTHER PTHR30273 1 121 1.9E-67 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13810 208937006eed6d8d96cd7ca677d52678 287 SUPERFAMILY SSF56281 36 268 6.94E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13810 208937006eed6d8d96cd7ca677d52678 287 Gene3D G3DSA:3.60.15.10 38 285 1.9E-41 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13810 208937006eed6d8d96cd7ca677d52678 287 Pfam PF00753 Metallo-beta-lactamase superfamily 57 184 1.9E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13810 208937006eed6d8d96cd7ca677d52678 287 PANTHER PTHR11935 57 201 5.6E-23 T 23-04-2016 NIAKO_RS13810 208937006eed6d8d96cd7ca677d52678 287 SMART SM00849 54 244 7.2E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PRINTS PR00996 Glutamate methyltransferase family signature 99 119 6.1E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PRINTS PR00996 Glutamate methyltransferase family signature 205 219 6.1E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 6.1E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PRINTS PR00996 Glutamate methyltransferase family signature 131 147 6.1E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PRINTS PR00996 Glutamate methyltransferase family signature 224 247 6.1E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 SMART SM00138 4 267 2.0E-35 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 56 7.9E-13 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PANTHER PTHR24422:SF8 2 268 4.9E-99 T 23-04-2016 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 SUPERFAMILY SSF47757 2 69 6.67E-8 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 SUPERFAMILY SSF53335 70 249 3.06E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 Gene3D G3DSA:3.40.50.150 69 265 2.0E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 Gene3D G3DSA:1.10.155.10 2 68 3.8E-6 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 PANTHER PTHR24422 2 268 4.9E-99 T 23-04-2016 NIAKO_RS13505 f70762763ecc39ee1ddab67be80d9e99 270 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 248 1.2E-39 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NIAKO_RS25050 bd0c64a641188a1e8755b8f3c014fd22 154 Pfam PF14376 Haem-binding domain 11 142 3.1E-51 T 23-04-2016 IPR025992 Haem-binding domain NIAKO_RS25050 bd0c64a641188a1e8755b8f3c014fd22 154 SMART SM01235 10 145 2.9E-57 T 23-04-2016 IPR025992 Haem-binding domain NIAKO_RS21340 887efec267f28353a1cb3b43653d26e9 184 PANTHER PTHR10681:SF91 2 184 4.2E-67 T 23-04-2016 NIAKO_RS21340 887efec267f28353a1cb3b43653d26e9 184 Gene3D G3DSA:3.40.30.10 11 176 5.2E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS21340 887efec267f28353a1cb3b43653d26e9 184 PANTHER PTHR10681 2 184 4.2E-67 T 23-04-2016 NIAKO_RS21340 887efec267f28353a1cb3b43653d26e9 184 Pfam PF00578 AhpC/TSA family 12 136 2.0E-21 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS21340 887efec267f28353a1cb3b43653d26e9 184 SUPERFAMILY SSF52833 5 184 9.19E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1024 1.1E-256 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Gene3D G3DSA:2.40.170.20 228 249 1.8E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Gene3D G3DSA:2.40.170.20 856 1024 1.8E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Gene3D G3DSA:2.40.170.20 310 782 1.8E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Gene3D G3DSA:2.60.40.1120 29 114 2.4E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 202 232 8.6E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF49464 28 110 1.02E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Pfam PF13715 CarboxypepD_reg-like domain 29 112 2.7E-17 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF56935 110 250 3.89E-82 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF56935 301 389 3.89E-82 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF56935 428 767 3.89E-82 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF56935 847 891 3.89E-82 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 SUPERFAMILY SSF56935 929 1023 3.89E-82 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 226 3.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 Gene3D G3DSA:2.170.130.10 115 227 1.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532:SF57 1 355 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532:SF57 791 1022 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532:SF57 559 775 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532:SF57 462 528 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532 1 355 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532 791 1022 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532 559 775 5.9E-244 T 23-04-2016 NIAKO_RS20435 0143079bae8d66b304625ae2dcd24cd9 1024 PANTHER PTHR11532 462 528 5.9E-244 T 23-04-2016 NIAKO_RS13905 ab35f81dcb5c347a4bd5ca2b904d32d9 187 PANTHER PTHR24567:SF33 25 187 1.9E-32 T 23-04-2016 NIAKO_RS13905 ab35f81dcb5c347a4bd5ca2b904d32d9 187 SUPERFAMILY SSF51206 19 138 4.06E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS13905 ab35f81dcb5c347a4bd5ca2b904d32d9 187 Pfam PF00027 Cyclic nucleotide-binding domain 28 114 1.3E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS13905 ab35f81dcb5c347a4bd5ca2b904d32d9 187 Gene3D G3DSA:2.60.120.10 8 153 6.2E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS13905 ab35f81dcb5c347a4bd5ca2b904d32d9 187 PANTHER PTHR24567 25 187 1.9E-32 T 23-04-2016 NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 PANTHER PTHR30015:SF5 1 307 4.4E-122 T 23-04-2016 NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 SUPERFAMILY SSF52980 166 284 5.9E-15 T 23-04-2016 IPR011335 Restriction endonuclease type II-like NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 Gene3D G3DSA:3.40.1350.10 157 283 4.4E-13 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 Pfam PF04471 Restriction endonuclease 162 281 2.6E-33 T 23-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 PANTHER PTHR30015 1 307 4.4E-122 T 23-04-2016 NIAKO_RS35345 7e86c480e174b467135c147372a810f1 307 Pfam PF14338 Mrr N-terminal domain 5 90 5.1E-31 T 23-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain NIAKO_RS31480 0d593a8eca2bf209585aabff53b2c145 140 SUPERFAMILY SSF50044 106 138 5.63E-5 T 23-04-2016 IPR001452 SH3 domain GO:0005515 NIAKO_RS31480 0d593a8eca2bf209585aabff53b2c145 140 Pfam PF08239 Bacterial SH3 domain 84 137 2.4E-13 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type NIAKO_RS31480 0d593a8eca2bf209585aabff53b2c145 140 Gene3D G3DSA:2.30.30.40 105 138 3.2E-6 T 23-04-2016 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 Pfam PF14322 Starch-binding associating with outer membrane 19 229 4.9E-20 T 23-04-2016 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 Gene3D G3DSA:1.25.40.10 451 547 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 Gene3D G3DSA:1.25.40.10 210 350 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 SUPERFAMILY SSF48452 403 621 8.72E-114 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 SUPERFAMILY SSF48452 15 370 8.72E-114 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15940 09761558388f6be77832787a820547fc 621 Pfam PF07980 SusD family 308 621 4.0E-55 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS23765 5c0b68a45834f417b0b78a9ee326f078 464 Pfam PF02321 Outer membrane efflux protein 269 446 2.8E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS23765 5c0b68a45834f417b0b78a9ee326f078 464 Pfam PF02321 Outer membrane efflux protein 36 237 1.3E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS23765 5c0b68a45834f417b0b78a9ee326f078 464 SUPERFAMILY SSF56954 5 447 2.35E-46 T 23-04-2016 NIAKO_RS23765 5c0b68a45834f417b0b78a9ee326f078 464 PANTHER PTHR30026 6 460 4.0E-22 T 23-04-2016 NIAKO_RS23765 5c0b68a45834f417b0b78a9ee326f078 464 Gene3D G3DSA:1.20.1600.10 33 444 1.0E-37 T 23-04-2016 NIAKO_RS10325 8f63000f29be2053ed6e50e977837ce3 471 Pfam PF13483 Beta-lactamase superfamily domain 5 98 4.5E-6 T 23-04-2016 NIAKO_RS10325 8f63000f29be2053ed6e50e977837ce3 471 Gene3D G3DSA:3.60.15.10 1 222 1.8E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS10325 8f63000f29be2053ed6e50e977837ce3 471 PANTHER PTHR15032 1 113 8.5E-12 T 23-04-2016 NIAKO_RS10325 8f63000f29be2053ed6e50e977837ce3 471 SUPERFAMILY SSF56281 1 245 1.4E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS10325 8f63000f29be2053ed6e50e977837ce3 471 SMART SM00849 7 170 0.0073 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 Pfam PF03462 PCRF domain 5 152 1.4E-44 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 Pfam PF00472 RF-1 domain 162 270 7.7E-38 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 296 2.6E-115 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 SUPERFAMILY SSF75620 3 296 1.7E-109 T 23-04-2016 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 Gene3D G3DSA:3.30.160.20 160 236 2.3E-30 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 PANTHER PTHR11075 1 302 7.6E-129 T 23-04-2016 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 SMART SM00937 22 127 4.9E-35 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 177 193 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NIAKO_RS05715 9872714a8cc69286cb723f185e1c861c 302 PANTHER PTHR11075:SF6 1 302 7.6E-129 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 NIAKO_RS19295 6514f2e68035856b7380abbff9946df5 485 SUPERFAMILY SSF48452 17 483 1.23E-51 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19295 6514f2e68035856b7380abbff9946df5 485 Pfam PF14322 Starch-binding associating with outer membrane 21 222 1.3E-40 T 23-04-2016 NIAKO_RS19295 6514f2e68035856b7380abbff9946df5 485 Pfam PF07980 SusD family 354 445 3.3E-7 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS19295 6514f2e68035856b7380abbff9946df5 485 Gene3D G3DSA:1.25.40.10 205 394 1.8E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14745 adc0796eef5fd63d5b1612dc103781b8 141 Gene3D G3DSA:3.30.750.24 5 96 3.4E-10 T 23-04-2016 IPR002645 STAS domain NIAKO_RS14745 adc0796eef5fd63d5b1612dc103781b8 141 SUPERFAMILY SSF52091 3 115 1.71E-14 T 23-04-2016 IPR002645 STAS domain NIAKO_RS14745 adc0796eef5fd63d5b1612dc103781b8 141 Pfam PF01740 STAS domain 11 96 2.8E-5 T 23-04-2016 IPR002645 STAS domain NIAKO_RS14745 adc0796eef5fd63d5b1612dc103781b8 141 PANTHER PTHR33745 1 125 4.1E-40 T 23-04-2016 NIAKO_RS25850 0521e42338bea4205b43da21b3243e8d 569 Pfam PF05960 Bacterial protein of unknown function (DUF885) 54 550 1.7E-72 T 23-04-2016 IPR010281 Protein of unknown function DUF885 NIAKO_RS25850 0521e42338bea4205b43da21b3243e8d 569 SUPERFAMILY SSF55486 362 535 3.66E-7 T 23-04-2016 NIAKO_RS25850 0521e42338bea4205b43da21b3243e8d 569 SUPERFAMILY SSF55486 302 325 3.66E-7 T 23-04-2016 NIAKO_RS12965 6512ccb3ab80990c0f1ce282a7781dcd 272 PANTHER PTHR22726 8 269 1.1E-66 T 23-04-2016 NIAKO_RS12965 6512ccb3ab80990c0f1ce282a7781dcd 272 Pfam PF01435 Peptidase family M48 88 260 1.9E-34 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NIAKO_RS12965 6512ccb3ab80990c0f1ce282a7781dcd 272 Gene3D G3DSA:3.30.2010.10 88 154 2.9E-13 T 23-04-2016 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 Gene3D G3DSA:2.40.10.10 143 218 6.9E-18 T 23-04-2016 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 Gene3D G3DSA:2.40.10.10 219 327 3.2E-17 T 23-04-2016 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 SUPERFAMILY SSF50494 138 327 1.75E-35 T 23-04-2016 IPR009003 Peptidase S1, PA clan NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PANTHER PTHR22939 165 328 1.7E-24 T 23-04-2016 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PRINTS PR00834 HtrA/DegQ protease family signature 269 286 5.0E-14 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PRINTS PR00834 HtrA/DegQ protease family signature 291 308 5.0E-14 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PRINTS PR00834 HtrA/DegQ protease family signature 195 215 5.0E-14 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PRINTS PR00834 HtrA/DegQ protease family signature 174 186 5.0E-14 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 Pfam PF13365 Trypsin-like peptidase domain 165 298 7.0E-23 T 23-04-2016 NIAKO_RS21700 40d6a8a5e752968dabae8cf1f5c91064 364 PANTHER PTHR22939:SF79 165 328 1.7E-24 T 23-04-2016 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 PANTHER PTHR23091 136 316 1.7E-21 T 23-04-2016 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 SUPERFAMILY SSF46785 10 139 1.33E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 Gene3D G3DSA:1.10.10.10 9 132 1.3E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 PANTHER PTHR23091:SF265 136 316 1.7E-21 T 23-04-2016 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 Pfam PF12802 MarR family 37 94 2.1E-10 T 23-04-2016 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 SUPERFAMILY SSF55729 164 310 5.66E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 Pfam PF13508 Acetyltransferase (GNAT) domain 211 297 1.4E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 SMART SM00347 29 131 0.0067 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS02015 db4593bf49e6f97c0d10f1af9c651494 317 Gene3D G3DSA:3.40.630.30 164 315 4.4E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 Gene3D G3DSA:3.30.360.10 292 346 2.5E-22 T 23-04-2016 NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 Gene3D G3DSA:3.30.360.10 134 259 2.5E-22 T 23-04-2016 NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 SUPERFAMILY SSF51735 2 151 4.67E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 SUPERFAMILY SSF55347 134 288 5.89E-15 T 23-04-2016 NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 Gene3D G3DSA:3.40.50.720 1 133 4.6E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 1.2E-21 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS17680 68d69da2547558581104b445e51e28ed 354 PANTHER PTHR22604 1 353 2.8E-54 T 23-04-2016 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 SUPERFAMILY SSF88659 120 178 8.22E-9 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 175 5.9E-16 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 Pfam PF04542 Sigma-70 region 2 27 90 1.6E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 PANTHER PTHR30173 1 179 1.3E-18 T 23-04-2016 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 SUPERFAMILY SSF88946 2 97 3.4E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 Gene3D G3DSA:1.10.1740.10 1 107 6.5E-13 T 23-04-2016 NIAKO_RS03950 af222cb82e1867b99c28220b3c21543d 186 Gene3D G3DSA:1.10.10.10 122 178 2.3E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07280 8dd67af630fa57f8a800c26c45040150 198 PANTHER PTHR24567 30 196 4.8E-16 T 23-04-2016 NIAKO_RS07280 8dd67af630fa57f8a800c26c45040150 198 Gene3D G3DSA:2.60.120.10 24 150 2.2E-14 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS07280 8dd67af630fa57f8a800c26c45040150 198 SUPERFAMILY SSF51206 25 138 2.49E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS07280 8dd67af630fa57f8a800c26c45040150 198 Pfam PF00027 Cyclic nucleotide-binding domain 29 112 1.9E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07280 8dd67af630fa57f8a800c26c45040150 198 SMART SM00100 5 127 9.7E-4 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS36820 70dd663e2e1d68a8cd95ae6a4b9f7bc0 369 PANTHER PTHR34220 143 369 2.3E-55 T 23-04-2016 NIAKO_RS36820 70dd663e2e1d68a8cd95ae6a4b9f7bc0 369 Pfam PF06580 Histidine kinase 181 262 7.8E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36820 70dd663e2e1d68a8cd95ae6a4b9f7bc0 369 PANTHER PTHR34220:SF1 143 369 2.3E-55 T 23-04-2016 NIAKO_RS36820 70dd663e2e1d68a8cd95ae6a4b9f7bc0 369 Gene3D G3DSA:3.30.565.10 235 319 7.0E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS06560 f9ea1b8e72849924aada2c0b939af26d 397 Gene3D G3DSA:1.50.10.20 59 382 2.2E-116 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS06560 f9ea1b8e72849924aada2c0b939af26d 397 Pfam PF09492 Pectic acid lyase 76 373 2.0E-110 T 23-04-2016 IPR012669 Pectic acid lyase NIAKO_RS06560 f9ea1b8e72849924aada2c0b939af26d 397 TIGRFAM TIGR02474 pec_lyase: pectate lyase 76 373 5.5E-94 T 23-04-2016 IPR012669 Pectic acid lyase NIAKO_RS06560 f9ea1b8e72849924aada2c0b939af26d 397 SUPERFAMILY SSF81853 60 382 4.32E-81 T 23-04-2016 NIAKO_RS06490 e0184335fcca19bc4571cd4f41f8a326 205 Pfam PF14595 Thioredoxin 38 158 3.5E-38 T 23-04-2016 NIAKO_RS06490 e0184335fcca19bc4571cd4f41f8a326 205 Gene3D G3DSA:3.40.30.10 12 195 5.9E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06490 e0184335fcca19bc4571cd4f41f8a326 205 SUPERFAMILY SSF52833 61 151 4.84E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 5.8E-64 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Gene3D G3DSA:3.40.47.10 183 272 2.8E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Gene3D G3DSA:3.40.47.10 3 124 2.8E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Pfam PF02803 Thiolase, C-terminal domain 267 388 7.7E-46 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 388 5.6E-133 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Gene3D G3DSA:3.40.47.10 142 182 5.2E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 Gene3D G3DSA:3.40.47.10 274 389 5.2E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 PIRSF PIRSF000429 1 391 3.5E-124 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 PANTHER PTHR18919 1 391 3.8E-169 T 23-04-2016 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 SUPERFAMILY SSF53901 268 389 8.64E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 PANTHER PTHR18919:SF69 1 391 3.8E-169 T 23-04-2016 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 SUPERFAMILY SSF53901 2 267 3.84E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NIAKO_RS27495 8ebd3b56a6cd87c0348405d24130d357 391 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 ProSitePatterns PS00893 Nudix box signature. 106 127 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 SUPERFAMILY SSF55811 79 204 1.49E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 Gene3D G3DSA:3.90.79.10 80 197 6.2E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 Pfam PF00293 NUDIX domain 82 188 3.1E-17 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 PRINTS PR00502 NUDIX hydrolase family signature 101 115 8.89E-8 T 23-04-2016 IPR020476 NUDIX hydrolase NIAKO_RS05760 8ce270e8ee5a0294007a7f8323ba8ce9 207 PRINTS PR00502 NUDIX hydrolase family signature 115 130 8.89E-8 T 23-04-2016 IPR020476 NUDIX hydrolase NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.5E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.5E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.5E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 7.9E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 Gene3D G3DSA:1.10.10.10 5 106 1.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 SMART SM00418 6 87 6.6E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 SUPERFAMILY SSF46785 6 102 7.89E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01285 8a6c114c449d27906feda3f917d2b1fb 113 PANTHER PTHR33154 9 96 4.9E-14 T 23-04-2016 NIAKO_RS21705 0f5f717219414a37d9153183f488a920 301 Gene3D G3DSA:3.90.550.10 5 286 4.8E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS21705 0f5f717219414a37d9153183f488a920 301 Pfam PF00483 Nucleotidyl transferase 23 219 9.9E-7 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS21705 0f5f717219414a37d9153183f488a920 301 SUPERFAMILY SSF53448 6 288 4.73E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS35740 7f63a27797498997ecedc09aac864d0d 153 PANTHER PTHR11803:SF2 1 152 1.1E-34 T 23-04-2016 NIAKO_RS35740 7f63a27797498997ecedc09aac864d0d 153 SUPERFAMILY SSF55298 1 152 1.18E-47 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS35740 7f63a27797498997ecedc09aac864d0d 153 PANTHER PTHR11803 1 152 1.1E-34 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS35740 7f63a27797498997ecedc09aac864d0d 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 4 147 3.0E-24 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS35740 7f63a27797498997ecedc09aac864d0d 153 Gene3D G3DSA:3.30.1330.40 1 152 6.5E-55 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 72 202 1.3E-27 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 PANTHER PTHR34986 72 204 3.2E-29 T 23-04-2016 NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 Pfam PF04074 Domain of unknown function (DUF386) 63 201 4.6E-41 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 SUPERFAMILY SSF51197 62 201 9.89E-35 T 23-04-2016 NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 PANTHER PTHR34986:SF1 72 204 3.2E-29 T 23-04-2016 NIAKO_RS26380 d2aa7b47619c36034fa1604cf8928aaf 204 Gene3D G3DSA:2.60.120.370 61 202 9.3E-41 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PANTHER PTHR24093:SF50 101 775 1.5E-82 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00943 Copper-transporting ATPase signature 230 249 1.3E-9 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00943 Copper-transporting ATPase signature 137 157 1.3E-9 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00943 Copper-transporting ATPase signature 427 441 1.3E-9 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00943 Copper-transporting ATPase signature 661 678 1.3E-9 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 SUPERFAMILY SSF81653 308 402 1.83E-18 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Pfam PF00702 haloacid dehalogenase-like hydrolase 498 697 2.4E-24 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 12 85 3.4E-12 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 2.8E-11 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 502 516 2.8E-11 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 684 703 2.8E-11 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Gene3D G3DSA:3.30.70.100 90 157 1.1E-9 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 SUPERFAMILY SSF56784 501 520 1.49E-29 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 SUPERFAMILY SSF56784 555 781 1.49E-29 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 PANTHER PTHR24093 101 775 1.5E-82 T 23-04-2016 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Pfam PF00122 E1-E2 ATPase 279 493 3.8E-33 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Gene3D G3DSA:2.70.150.10 308 401 1.0E-14 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 306 758 3.2E-47 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Gene3D G3DSA:3.40.50.1000 544 545 8.6E-26 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Gene3D G3DSA:3.40.50.1000 481 511 8.6E-26 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 Gene3D G3DSA:3.40.50.1000 604 752 8.6E-26 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS09540 648b5fdf9afa4ad91e506037eed1db91 796 SUPERFAMILY SSF55008 90 158 5.63E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 PANTHER PTHR30069 166 408 1.4E-41 T 23-04-2016 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Gene3D G3DSA:2.60.40.1120 165 232 1.4E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Pfam PF07715 TonB-dependent Receptor Plug Domain 278 357 1.6E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Gene3D G3DSA:2.170.130.10 245 357 4.8E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Pfam PF13715 CarboxypepD_reg-like domain 165 248 7.8E-11 T 23-04-2016 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Gene3D G3DSA:2.40.170.20 630 891 4.9E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 Gene3D G3DSA:2.40.170.20 384 596 4.9E-42 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 SUPERFAMILY SSF49464 164 246 7.85E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 PANTHER PTHR30069:SF1 166 408 1.4E-41 T 23-04-2016 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 SUPERFAMILY SSF56935 633 901 7.85E-74 T 23-04-2016 NIAKO_RS33440 035d8e369e468776dc0f24ba33c44659 922 SUPERFAMILY SSF56935 245 599 7.85E-74 T 23-04-2016 NIAKO_RS03245 409affffb0341dbe4cfa8d3cd2878815 270 Gene3D G3DSA:2.40.50.40 160 227 2.6E-11 T 23-04-2016 NIAKO_RS03245 409affffb0341dbe4cfa8d3cd2878815 270 Pfam PF04397 LytTr DNA-binding domain 170 268 2.2E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS03245 409affffb0341dbe4cfa8d3cd2878815 270 SMART SM00850 167 269 1.1E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS05415 ae47d2e786ed12b213c6c64291a274e2 397 SUPERFAMILY SSF48317 110 391 7.19E-21 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS05415 ae47d2e786ed12b213c6c64291a274e2 397 PANTHER PTHR34599:SF1 104 386 3.5E-25 T 23-04-2016 NIAKO_RS05415 ae47d2e786ed12b213c6c64291a274e2 397 Gene3D G3DSA:1.10.606.10 140 385 9.0E-49 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS05415 ae47d2e786ed12b213c6c64291a274e2 397 PANTHER PTHR34599 104 386 3.5E-25 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 70 1055 1.9E-119 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Gene3D G3DSA:2.40.170.20 353 827 1.1E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Gene3D G3DSA:2.40.170.20 891 944 1.1E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Gene3D G3DSA:2.40.170.20 985 1055 1.1E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Gene3D G3DSA:2.170.130.10 224 274 9.1E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Gene3D G3DSA:2.170.130.10 126 188 9.1E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 978 1055 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 345 432 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 223 295 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 467 827 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 127 187 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 SUPERFAMILY SSF56935 893 937 1.05E-55 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532:SF57 601 1053 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532:SF57 223 437 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532:SF57 69 191 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532:SF57 545 571 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 271 4.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532 601 1053 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532 223 437 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532 69 191 1.2E-80 T 23-04-2016 NIAKO_RS15185 60b4bc9d79684a55f6490fb0c796081b 1055 PANTHER PTHR11532 545 571 1.2E-80 T 23-04-2016 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 Pfam PF14322 Starch-binding associating with outer membrane 66 233 1.6E-8 T 23-04-2016 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 Gene3D G3DSA:1.25.40.10 435 525 1.6E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 Gene3D G3DSA:1.25.40.10 215 312 1.6E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 SUPERFAMILY SSF48452 422 578 1.06E-84 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 SUPERFAMILY SSF48452 22 391 1.06E-84 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06275 233152232dd6592bf8af34d771248d60 578 Pfam PF07980 SusD family 429 578 4.2E-22 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 256 3.0E-55 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 228 1.5E-26 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 256 7.7E-54 T 23-04-2016 IPR000150 Cof protein GO:0016787 NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 Gene3D G3DSA:3.30.1240.10 82 174 2.3E-17 T 23-04-2016 NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 SUPERFAMILY SSF56784 2 260 5.19E-63 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 PANTHER PTHR10000 2 262 2.3E-50 T 23-04-2016 NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 Gene3D G3DSA:3.40.50.1000 2 72 6.4E-48 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS08430 6fb6365ed2d41cec2bf10f49020ca9d8 263 Gene3D G3DSA:3.40.50.1000 175 260 6.4E-48 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00369 Flavodoxin signature 177 196 1.4E-13 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00369 Flavodoxin signature 74 87 1.4E-13 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00369 Flavodoxin signature 122 133 1.4E-13 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00369 Flavodoxin signature 153 163 1.4E-13 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Gene3D G3DSA:3.40.50.360 69 216 6.7E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Pfam PF00175 Oxidoreductase NAD-binding domain 445 550 5.1E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Pfam PF00667 FAD binding domain 344 414 1.5E-11 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Pfam PF00667 FAD binding domain 237 308 1.1E-9 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 SUPERFAMILY SSF52218 71 215 1.93E-41 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Pfam PF00258 Flavodoxin 75 199 1.6E-28 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PANTHER PTHR19384 72 587 2.5E-162 T 23-04-2016 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Gene3D G3DSA:2.40.30.10 235 271 1.3E-30 T 23-04-2016 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Gene3D G3DSA:2.40.30.10 373 444 1.3E-30 T 23-04-2016 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PANTHER PTHR19384:SF76 72 587 2.5E-162 T 23-04-2016 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 536 544 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 469 478 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 409 418 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 513 529 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 444 463 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 482 493 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 376 383 4.1E-28 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 SUPERFAMILY SSF52343 434 587 2.49E-43 T 23-04-2016 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Gene3D G3DSA:1.20.990.10 272 311 2.2E-7 T 23-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 SUPERFAMILY SSF63380 236 435 1.97E-42 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NIAKO_RS34365 e491b2c070be164f785a9e6b409c71fd 587 Gene3D G3DSA:3.40.50.80 445 586 1.3E-51 T 23-04-2016 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 Gene3D G3DSA:3.50.50.60 132 192 1.2E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 Gene3D G3DSA:3.50.50.60 2 83 1.2E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 Gene3D G3DSA:3.50.50.60 290 346 1.2E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 Pfam PF01266 FAD dependent oxidoreductase 4 323 8.2E-14 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 SUPERFAMILY SSF51971 275 330 9.53E-17 T 23-04-2016 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 SUPERFAMILY SSF51971 2 219 9.53E-17 T 23-04-2016 NIAKO_RS00655 9cafe4ee5950785d8ceb14f08c3576ac 351 Gene3D G3DSA:3.30.9.10 193 289 1.2E-8 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339:SF0 24 127 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339:SF0 145 346 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339:SF0 367 394 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 Pfam PF00295 Glycosyl hydrolases family 28 57 351 2.8E-24 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 193 218 120.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 247 268 1300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 335 360 7200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 219 240 170.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 302 323 480.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 274 296 2000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SMART SM00710 382 404 3100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339 24 127 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339 145 346 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 PANTHER PTHR31339 367 394 2.4E-67 T 23-04-2016 NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 SUPERFAMILY SSF51126 1 397 4.51E-74 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS03530 46d2eb9132c26b6cd15b86411f48f9fb 511 Gene3D G3DSA:2.160.20.10 5 496 1.9E-103 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 PANTHER PTHR12526 1 473 1.2E-111 T 23-04-2016 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 Pfam PF08323 Starch synthase catalytic domain 3 227 1.5E-60 T 23-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 Hamap MF_00484 Glycogen synthase [glgA]. 1 470 35.87 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 PANTHER PTHR12526:SF17 1 473 1.2E-111 T 23-04-2016 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 470 1.2E-138 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 Pfam PF00534 Glycosyl transferases group 1 283 439 2.1E-8 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 SUPERFAMILY SSF53756 3 472 3.84E-99 T 23-04-2016 NIAKO_RS10600 36fc5c5adb8875441cef82ecfd51f625 473 Gene3D G3DSA:3.40.50.2000 247 451 1.1E-54 T 23-04-2016 NIAKO_RS35180 d8ca73f05ecc024d243a01397ab1205f 410 SUPERFAMILY SSF48230 40 376 1.28E-52 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS35180 d8ca73f05ecc024d243a01397ab1205f 410 Gene3D G3DSA:1.50.10.110 44 387 8.9E-53 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS35180 d8ca73f05ecc024d243a01397ab1205f 410 Pfam PF05426 Alginate lyase 95 319 4.1E-19 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 PRINTS PR00483 Bacterial acid phosphatase class A signature 273 291 3.0E-6 T 23-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 PRINTS PR00483 Bacterial acid phosphatase class A signature 207 233 3.0E-6 T 23-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 PRINTS PR00483 Bacterial acid phosphatase class A signature 239 263 3.0E-6 T 23-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 SMART SM00014 170 276 0.0024 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 SUPERFAMILY SSF48317 90 275 1.3E-20 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 Pfam PF01569 PAP2 superfamily 182 280 4.4E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS20055 238bfe6a2ddbe97e140984b5891fe2b7 299 Gene3D G3DSA:1.20.144.10 88 294 1.9E-30 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 SMART SM00862 155 231 6.6E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 2.0E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 Pfam PF00072 Response regulator receiver domain 7 116 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 PANTHER PTHR26402 5 233 6.2E-79 T 23-04-2016 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 PANTHER PTHR26402:SF553 5 233 6.2E-79 T 23-04-2016 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 SUPERFAMILY SSF52172 2 127 1.31E-37 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 Gene3D G3DSA:1.10.10.10 134 231 1.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 SUPERFAMILY SSF46894 133 231 1.19E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 SMART SM00448 5 116 2.5E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32595 50dc83efd9ec66473b17e835d3acb64b 233 Gene3D G3DSA:3.40.50.2300 3 127 3.8E-39 T 23-04-2016 NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 713 790 4.2E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 Pfam PF01345 Domain of unknown function DUF11 470 509 1.2E-7 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 44 92 1.3E-6 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 473 515 8.9E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 SUPERFAMILY SSF63829 243 430 1.44E-8 T 23-04-2016 NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 Gene3D G3DSA:2.60.40.10 622 698 7.1E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS34020 26c2a20ccf65e750f39e17fce8915ba4 790 SUPERFAMILY SSF63829 354 606 8.83E-6 T 23-04-2016 NIAKO_RS19725 a9ac1242e540ffac8f3f9468d043ff6a 455 Pfam PF07980 SusD family 337 454 1.8E-15 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS19725 a9ac1242e540ffac8f3f9468d043ff6a 455 SUPERFAMILY SSF48452 17 454 9.1E-56 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19725 a9ac1242e540ffac8f3f9468d043ff6a 455 Pfam PF14322 Starch-binding associating with outer membrane 21 224 1.4E-29 T 23-04-2016 NIAKO_RS19725 a9ac1242e540ffac8f3f9468d043ff6a 455 Gene3D G3DSA:1.25.40.10 207 396 9.5E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS33360 069c98ec30dd399f3818e5b34131209f 381 Gene3D G3DSA:3.40.50.2000 173 363 3.1E-26 T 23-04-2016 NIAKO_RS33360 069c98ec30dd399f3818e5b34131209f 381 PANTHER PTHR12526 59 381 3.1E-48 T 23-04-2016 NIAKO_RS33360 069c98ec30dd399f3818e5b34131209f 381 PANTHER PTHR12526 11 37 3.1E-48 T 23-04-2016 NIAKO_RS33360 069c98ec30dd399f3818e5b34131209f 381 SUPERFAMILY SSF53756 72 379 1.36E-57 T 23-04-2016 NIAKO_RS33360 069c98ec30dd399f3818e5b34131209f 381 Pfam PF00534 Glycosyl transferases group 1 198 361 1.5E-36 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 Pfam PF12838 4Fe-4S dicluster domain 9 91 1.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 Gene3D G3DSA:3.30.70.20 63 108 4.6E-14 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 Gene3D G3DSA:3.30.70.20 6 28 4.6E-14 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 PANTHER PTHR24960:SF38 64 110 2.3E-12 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 PANTHER PTHR24960:SF38 1 44 2.3E-12 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 SUPERFAMILY SSF54862 6 29 3.56E-14 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 SUPERFAMILY SSF54862 64 104 3.56E-14 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 PANTHER PTHR24960 64 110 2.3E-12 T 23-04-2016 NIAKO_RS01570 e46af6e3632174ceb8b4b42ac21927bf 115 PANTHER PTHR24960 1 44 2.3E-12 T 23-04-2016 NIAKO_RS28110 cc073e8752556271d691073cde2d387b 278 SUPERFAMILY SSF52518 3 272 5.19E-84 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS28110 cc073e8752556271d691073cde2d387b 278 PANTHER PTHR11624 1 273 1.6E-86 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS28110 cc073e8752556271d691073cde2d387b 278 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 267 1.5E-51 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS28110 cc073e8752556271d691073cde2d387b 278 PANTHER PTHR11624:SF86 1 273 1.6E-86 T 23-04-2016 NIAKO_RS28110 cc073e8752556271d691073cde2d387b 278 Gene3D G3DSA:3.40.50.970 3 271 2.4E-95 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS35240 1232aaf620e863ca36926fb2d0f64a3c 183 PANTHER PTHR35810:SF2 78 179 8.8E-26 T 23-04-2016 NIAKO_RS35240 1232aaf620e863ca36926fb2d0f64a3c 183 Pfam PF02661 Fic/DOC family 96 133 1.4E-8 T 23-04-2016 IPR003812 Fido domain NIAKO_RS35240 1232aaf620e863ca36926fb2d0f64a3c 183 PANTHER PTHR35810 78 179 8.8E-26 T 23-04-2016 NIAKO_RS35240 1232aaf620e863ca36926fb2d0f64a3c 183 Gene3D G3DSA:1.10.3290.10 102 141 8.0E-4 T 23-04-2016 IPR003812 Fido domain NIAKO_RS35240 1232aaf620e863ca36926fb2d0f64a3c 183 SUPERFAMILY SSF140931 99 137 2.49E-5 T 23-04-2016 IPR003812 Fido domain NIAKO_RS00460 70c9caa0554e79e885452634333dd197 194 Gene3D G3DSA:2.60.120.10 4 154 4.3E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS00460 70c9caa0554e79e885452634333dd197 194 SUPERFAMILY SSF51206 15 115 2.75E-13 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS00460 70c9caa0554e79e885452634333dd197 194 PANTHER PTHR24567:SF33 24 187 5.8E-18 T 23-04-2016 NIAKO_RS00460 70c9caa0554e79e885452634333dd197 194 PANTHER PTHR24567 24 187 5.8E-18 T 23-04-2016 NIAKO_RS00460 70c9caa0554e79e885452634333dd197 194 Pfam PF00027 Cyclic nucleotide-binding domain 26 111 4.4E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PANTHER PTHR24321 8 243 1.2E-15 T 23-04-2016 NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 240 6.1E-32 T 23-04-2016 NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PANTHER PTHR24321:SF6 8 243 1.2E-15 T 23-04-2016 NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.4E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 Gene3D G3DSA:3.40.50.720 6 243 8.9E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07140 4ffbe83d61ff1de31f87f16c94cbcae9 244 SUPERFAMILY SSF51735 10 243 1.46E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 SUPERFAMILY SSF51445 136 167 2.2E-5 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 SUPERFAMILY SSF51445 222 355 2.2E-5 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 PANTHER PTHR12872 33 732 0.0 T 23-04-2016 IPR007781 Alpha-N-acetylglucosaminidase KEGG: 00531+3.2.1.50 NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 Pfam PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 33 112 8.5E-26 T 23-04-2016 IPR024240 Alpha-N-acetylglucosaminidase, N-terminal KEGG: 00531+3.2.1.50 NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 Pfam PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 127 458 2.4E-148 T 23-04-2016 IPR024733 Alpha-N-acetylglucosaminidase, tim-barrel domain KEGG: 00531+3.2.1.50 NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 Pfam PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 467 729 1.9E-87 T 23-04-2016 IPR024732 Alpha-N-acetylglucosaminidase, C-terminal KEGG: 00531+3.2.1.50 NIAKO_RS03710 c0c1bd0517a1055bb7a74635efb1211e 735 PANTHER PTHR12872:SF1 33 732 0.0 T 23-04-2016 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 PANTHER PTHR21152 2 359 2.7E-152 T 23-04-2016 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 Gene3D G3DSA:3.40.640.10 15 254 3.6E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 Gene3D G3DSA:3.90.1150.10 256 357 1.1E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 Pfam PF00266 Aminotransferase class-V 4 345 1.4E-45 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 43.481 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 PIRSF PIRSF000525 1 359 5.1E-135 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 SUPERFAMILY SSF53383 2 356 6.95E-105 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 357 2.3E-141 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 NIAKO_RS28615 35a4dfc406c3071ccce5f4b5770014b8 359 PANTHER PTHR21152:SF1 2 359 2.7E-152 T 23-04-2016 NIAKO_RS29540 7ec81980fd7407ce0e15d2dbb840bab9 228 Gene3D G3DSA:3.40.1360.10 117 216 3.3E-10 T 23-04-2016 NIAKO_RS29540 7ec81980fd7407ce0e15d2dbb840bab9 228 Pfam PF13155 Toprim-like 123 210 1.0E-7 T 23-04-2016 NIAKO_RS29540 7ec81980fd7407ce0e15d2dbb840bab9 228 SUPERFAMILY SSF56731 56 217 1.96E-5 T 23-04-2016 NIAKO_RS35720 47c31d4b385d3d5780fb855ce6817118 509 PANTHER PTHR35148 4 508 5.0E-57 T 23-04-2016 NIAKO_RS35720 47c31d4b385d3d5780fb855ce6817118 509 Pfam PF12771 Starch-binding associating with outer membrane 13 509 1.5E-57 T 23-04-2016 NIAKO_RS35720 47c31d4b385d3d5780fb855ce6817118 509 SUPERFAMILY SSF48452 23 509 1.39E-110 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 Pfam PF00348 Polyprenyl synthetase 27 269 7.4E-76 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 Gene3D G3DSA:1.10.600.10 4 320 7.2E-96 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 SUPERFAMILY SSF48576 18 320 9.07E-89 T 23-04-2016 IPR008949 Isoprenoid synthase domain NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 PANTHER PTHR12001:SF23 23 321 2.1E-100 T 23-04-2016 NIAKO_RS04490 8cedebdb8e58cc293f7e52063ba620df 321 PANTHER PTHR12001 23 321 2.1E-100 T 23-04-2016 IPR017446 Polyprenyl synthetase-related NIAKO_RS33655 7a5d03241970b4050ec14fc49e8151bc 270 PANTHER PTHR34148 1 270 3.9E-52 T 23-04-2016 NIAKO_RS33655 7a5d03241970b4050ec14fc49e8151bc 270 Pfam PF02654 Cobalamin-5-phosphate synthase 11 260 5.0E-54 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 NIAKO_RS33655 7a5d03241970b4050ec14fc49e8151bc 270 PANTHER PTHR34148:SF1 1 270 3.9E-52 T 23-04-2016 NIAKO_RS33655 7a5d03241970b4050ec14fc49e8151bc 270 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 270 42.391 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 30 331 6.9E-101 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 338 31.813 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 SUPERFAMILY SSF56796 16 338 5.36E-84 T 23-04-2016 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 Gene3D G3DSA:1.20.1090.10 161 337 1.3E-53 T 23-04-2016 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 PIRSF PIRSF001455 1 339 8.8E-100 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 Pfam PF01761 3-dehydroquinate synthase 55 306 5.3E-87 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 Gene3D G3DSA:3.40.50.1970 18 159 5.6E-44 T 23-04-2016 NIAKO_RS22100 38eb86aae0c4d5366a24ff0d0b3798f5 339 PANTHER PTHR21090 24 338 3.6E-107 T 23-04-2016 NIAKO_RS37045 71d312b06f7f06e0e39ff36f5008c3df 365 SUPERFAMILY SSF81296 33 105 1.09E-5 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS37045 71d312b06f7f06e0e39ff36f5008c3df 365 SUPERFAMILY SSF81296 118 197 2.18E-5 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS37045 71d312b06f7f06e0e39ff36f5008c3df 365 Gene3D G3DSA:2.60.40.10 33 107 2.3E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS37045 71d312b06f7f06e0e39ff36f5008c3df 365 Gene3D G3DSA:2.60.40.10 119 193 7.4E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 PANTHER PTHR38478 1 836 6.9E-130 T 23-04-2016 NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 Pfam PF16313 Met-zincin 436 745 2.5E-109 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 SUPERFAMILY SSF55486 238 527 2.45E-24 T 23-04-2016 NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 Pfam PF17162 Domain of unknown function (DUF5118) 52 100 2.2E-19 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 Pfam PF17148 Domain of unknown function (DUF5117) 113 300 1.4E-60 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS19730 842a6d051be503239fb89c3fd5421c3d 842 Gene3D G3DSA:3.40.390.10 280 532 1.0E-12 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS12200 a1941eb48f1c4cff000ec1c67b8dd602 221 Gene3D G3DSA:3.40.50.880 1 220 1.1E-38 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS12200 a1941eb48f1c4cff000ec1c67b8dd602 221 SUPERFAMILY SSF52317 3 211 1.33E-12 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS12200 a1941eb48f1c4cff000ec1c67b8dd602 221 Pfam PF03575 Peptidase family S51 3 210 4.3E-24 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 NIAKO_RS11595 51e632e7e39b628fd1071e1d548877b9 325 SUPERFAMILY SSF53756 208 322 3.33E-9 T 23-04-2016 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 SUPERFAMILY SSF51445 166 396 3.66E-30 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 PANTHER PTHR10066:SF72 70 275 2.4E-41 T 23-04-2016 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Gene3D G3DSA:2.70.98.10 595 700 6.7E-6 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 PRINTS PR00132 Glycosyl hydrolase family 2 signature 180 194 6.5E-5 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 PRINTS PR00132 Glycosyl hydrolase family 2 signature 210 228 6.5E-5 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Gene3D G3DSA:3.20.20.80 168 396 4.3E-24 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Pfam PF00703 Glycosyl hydrolases family 2 77 169 7.7E-9 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 SUPERFAMILY SSF74650 522 703 2.98E-11 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 SUPERFAMILY SSF49303 82 169 2.88E-11 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Gene3D G3DSA:2.60.40.320 79 167 3.7E-12 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Gene3D G3DSA:2.60.40.320 409 484 4.2E-4 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Pfam PF02929 Beta galactosidase small chain 534 688 2.2E-5 T 23-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 173 251 9.5E-15 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS35915 88f89fac44d8f123f354c7fd7485dca5 768 PANTHER PTHR10066 70 275 2.4E-41 T 23-04-2016 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 PANTHER PTHR24012 1 82 6.1E-30 T 23-04-2016 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 Gene3D G3DSA:3.30.70.330 2 81 7.8E-31 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 SMART SM00361 2 75 1.6E-4 T 23-04-2016 IPR003954 RNA recognition motif domain, eukaryote GO:0003676 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 6.8E-24 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 SMART SM00360 2 75 9.6E-30 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS08220 2e52aca8627c6d2b19038ec8aaa61605 82 SUPERFAMILY SSF54928 2 81 9.0E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS26090 fd5d6134a789d3fd4520fb51f7132dfb 462 SUPERFAMILY SSF51126 28 373 1.3E-58 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26090 fd5d6134a789d3fd4520fb51f7132dfb 462 PANTHER PTHR31683:SF9 1 361 1.1E-100 T 23-04-2016 NIAKO_RS26090 fd5d6134a789d3fd4520fb51f7132dfb 462 PANTHER PTHR31683 1 361 1.1E-100 T 23-04-2016 NIAKO_RS26090 fd5d6134a789d3fd4520fb51f7132dfb 462 Gene3D G3DSA:2.160.20.10 13 364 1.2E-64 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS15170 18ec3645c1d269a572947733f42b6fcd 495 SUPERFAMILY SSF48452 24 494 3.98E-66 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15170 18ec3645c1d269a572947733f42b6fcd 495 Pfam PF07980 SusD family 385 471 4.3E-15 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15170 18ec3645c1d269a572947733f42b6fcd 495 Gene3D G3DSA:1.25.40.10 244 449 1.9E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15170 18ec3645c1d269a572947733f42b6fcd 495 Pfam PF14322 Starch-binding associating with outer membrane 28 261 3.2E-23 T 23-04-2016 NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 SUPERFAMILY SSF53448 5 282 2.7E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 Gene3D G3DSA:3.90.550.10 4 273 6.1E-77 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 SUPERFAMILY SSF159283 286 352 7.98E-16 T 23-04-2016 NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 Pfam PF01050 Mannose-6-phosphate isomerase 320 356 1.4E-5 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 Pfam PF00483 Nucleotidyl transferase 8 286 1.6E-43 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 PANTHER PTHR12526 156 291 1.4E-34 T 23-04-2016 NIAKO_RS00370 01f1e55b07180f27fa00f6a5c2082bff 378 PANTHER PTHR12526:SF387 156 291 1.4E-34 T 23-04-2016 NIAKO_RS34495 015afa62e082657c94c198582feefbe9 342 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 6 327 2.3E-50 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS34495 015afa62e082657c94c198582feefbe9 342 Pfam PF11751 Protein of unknown function (DUF3308) 21 326 3.2E-42 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 SUPERFAMILY SSF51998 178 627 2.47E-129 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 SUPERFAMILY SSF51998 751 834 2.47E-129 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PRINTS PR01183 Ribonucleotide reductase large chain signature 256 275 6.3E-13 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PRINTS PR01183 Ribonucleotide reductase large chain signature 383 394 6.3E-13 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PRINTS PR01183 Ribonucleotide reductase large chain signature 575 602 6.3E-13 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PRINTS PR01183 Ribonucleotide reductase large chain signature 456 478 6.3E-13 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 87 663 9.9E-148 T 23-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 746 851 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 312 530 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 888 1047 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 14 141 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 1076 1122 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 553 658 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573:SF18 172 289 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 41 128 2.6E-37 T 23-04-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Pfam PF02867 Ribonucleotide reductase, barrel domain 719 823 3.8E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Pfam PF02867 Ribonucleotide reductase, barrel domain 179 663 2.0E-112 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Gene3D G3DSA:3.20.70.20 47 504 8.6E-94 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Gene3D G3DSA:3.20.70.20 575 621 8.6E-94 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 Gene3D G3DSA:3.20.70.20 782 828 8.6E-94 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 746 851 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 312 530 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 888 1047 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 14 141 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 1076 1122 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 553 658 0.0 T 23-04-2016 NIAKO_RS27990 b7a0be21fefce4bb8a6cb31708b7af04 1122 PANTHER PTHR11573 172 289 0.0 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 PANTHER PTHR11911:SF6 312 500 5.9E-233 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 PANTHER PTHR11911:SF6 6 294 5.9E-233 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SUPERFAMILY SSF51412 230 490 3.53E-120 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SUPERFAMILY SSF51412 18 104 3.53E-120 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SUPERFAMILY SSF54631 97 218 1.39E-31 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 22 486 3.4E-159 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 22 499 82.725 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 Gene3D G3DSA:3.20.20.70 20 498 6.9E-196 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 PANTHER PTHR11911 312 500 5.9E-233 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 PANTHER PTHR11911 6 294 5.9E-233 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SMART SM01240 21 486 0.0 T 23-04-2016 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 PIRSF PIRSF000130 12 500 1.9E-203 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 22 468 1.0E-188 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 308 320 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 Pfam PF00571 CBS domain 110 154 7.4E-12 T 23-04-2016 IPR000644 CBS domain NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 Pfam PF00571 CBS domain 163 219 1.2E-9 T 23-04-2016 IPR000644 CBS domain NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SMART SM00116 171 219 7.9E-9 T 23-04-2016 IPR000644 CBS domain NIAKO_RS25025 f0f10f166c6d7acf5ca6c03b74ba9e01 500 SMART SM00116 110 158 4.5E-12 T 23-04-2016 IPR000644 CBS domain NIAKO_RS03630 6166613aaccaf4fa2f1e15f017a341e0 1217 Pfam PF14614 Domain of unknown function (DUF4450) 87 300 2.8E-93 T 23-04-2016 IPR028028 Protein of unknown function DUF4450 NIAKO_RS03630 6166613aaccaf4fa2f1e15f017a341e0 1217 SUPERFAMILY SSF48208 407 740 1.26E-28 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS03630 6166613aaccaf4fa2f1e15f017a341e0 1217 SUPERFAMILY SSF48208 294 378 1.26E-28 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS24285 8407fdf0477fa8c561f4562d77223ff7 246 SUPERFAMILY SSF53448 9 244 4.69E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS24285 8407fdf0477fa8c561f4562d77223ff7 246 Pfam PF00535 Glycosyl transferase family 2 10 128 4.2E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS24285 8407fdf0477fa8c561f4562d77223ff7 246 PANTHER PTHR10859 9 246 3.6E-33 T 23-04-2016 NIAKO_RS24285 8407fdf0477fa8c561f4562d77223ff7 246 Gene3D G3DSA:3.90.550.10 10 199 2.4E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 SMART SM00342 268 351 3.5E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 Gene3D G3DSA:1.10.10.60 308 353 1.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 Pfam PF12833 Helix-turn-helix domain 274 352 3.0E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 PANTHER PTHR11019 248 359 6.4E-15 T 23-04-2016 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 SUPERFAMILY SSF46689 307 354 4.93E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 PANTHER PTHR11019:SF61 248 359 6.4E-15 T 23-04-2016 NIAKO_RS19760 b0857db74820c650255e145b90f62545 359 Gene3D G3DSA:1.10.10.60 256 301 1.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 Pfam PF01381 Helix-turn-helix 8 62 1.7E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 SMART SM00530 7 62 3.6E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 SUPERFAMILY SSF51306 97 217 6.63E-10 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 Gene3D G3DSA:1.10.260.40 5 70 9.9E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 SUPERFAMILY SSF47413 2 64 2.17E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS25030 ccf1c93f534f64ba58ebe3e7b0a5a078 249 Gene3D G3DSA:2.10.109.10 96 214 1.1E-9 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 SMART SM00382 26 215 2.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 Gene3D G3DSA:3.40.50.300 1 231 4.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 SUPERFAMILY SSF52540 1 230 2.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 Pfam PF00005 ABC transporter 17 165 6.9E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 PANTHER PTHR24220:SF567 3 241 9.2E-107 T 23-04-2016 NIAKO_RS00680 2cf69ce4901157bec423da0b9330350b 270 PANTHER PTHR24220 3 241 9.2E-107 T 23-04-2016 NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 Gene3D G3DSA:2.60.120.10 21 250 4.1E-53 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 Pfam PF05726 Pirin C-terminal cupin domain 170 276 2.1E-24 T 23-04-2016 IPR008778 Pirin, C-terminal domain NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 PIRSF PIRSF006232 7 284 1.1E-56 T 23-04-2016 IPR012093 Pirin NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 PANTHER PTHR13903:SF8 25 276 2.3E-53 T 23-04-2016 NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 PANTHER PTHR13903 25 276 2.3E-53 T 23-04-2016 IPR012093 Pirin NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 SUPERFAMILY SSF51182 26 280 1.75E-53 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS08120 85d2e68bcb2068b7c4c4cb7f0ab16072 290 Pfam PF02678 Pirin 33 115 9.0E-16 T 23-04-2016 IPR003829 Pirin, N-terminal domain NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 Pfam PF00701 Dihydrodipicolinate synthetase family 22 296 2.0E-37 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 Gene3D G3DSA:3.20.20.70 1 301 2.3E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 PANTHER PTHR12128 1 302 4.1E-50 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 SUPERFAMILY SSF51569 5 299 3.45E-53 T 23-04-2016 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 SMART SM01130 5 302 1.9E-51 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS17715 16f9b569a001c3cb56a58e1ea06f846d 308 PIRSF PIRSF001365 1 305 1.0E-45 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS29775 8e8a603f139f98c28e6e9a7f50e6a055 224 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 3 221 1.9E-69 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 NIAKO_RS29775 8e8a603f139f98c28e6e9a7f50e6a055 224 PANTHER PTHR36452:SF1 1 221 2.4E-42 T 23-04-2016 NIAKO_RS29775 8e8a603f139f98c28e6e9a7f50e6a055 224 Pfam PF09365 Conserved hypothetical protein (DUF2461) 6 215 5.5E-74 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 NIAKO_RS29775 8e8a603f139f98c28e6e9a7f50e6a055 224 PIRSF PIRSF028451 1 224 5.4E-67 T 23-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 NIAKO_RS29775 8e8a603f139f98c28e6e9a7f50e6a055 224 PANTHER PTHR36452 1 221 2.4E-42 T 23-04-2016 NIAKO_RS15005 f79594f95db109bdaa0a06ed559174d6 496 Gene3D G3DSA:2.40.160.20 341 432 1.6E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS07190 f39bcce4d29ebd982fbbe8c13ce7c404 529 SUPERFAMILY SSF103473 18 208 7.46E-13 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07190 f39bcce4d29ebd982fbbe8c13ce7c404 529 SUPERFAMILY SSF103473 255 428 7.46E-13 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS07190 f39bcce4d29ebd982fbbe8c13ce7c404 529 Gene3D G3DSA:1.20.1250.20 275 424 4.3E-4 T 23-04-2016 NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 Pfam PF00578 AhpC/TSA family 450 565 3.4E-18 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 PANTHER PTHR10681 447 566 1.7E-19 T 23-04-2016 NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 Gene3D G3DSA:3.40.30.10 5 29 1.0E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 Gene3D G3DSA:3.40.30.10 446 592 1.0E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 ProSitePatterns PS00194 Thioredoxin family active site. 477 495 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS36805 9cc98ca454da9ff943fee8db76cdd1f4 594 SUPERFAMILY SSF52833 445 588 8.69E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.4E-5 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 Pfam PF00107 Zinc-binding dehydrogenase 161 271 6.1E-14 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 SUPERFAMILY SSF50129 4 142 1.02E-37 T 23-04-2016 IPR011032 GroES-like NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 Gene3D G3DSA:3.40.50.720 135 294 1.0E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 SMART SM00829 14 328 3.8E-8 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 Gene3D G3DSA:3.90.180.10 22 134 1.5E-8 T 23-04-2016 IPR011032 GroES-like NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 PANTHER PTHR11695:SF13 18 332 3.2E-129 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 330 8.4E-122 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 PANTHER PTHR11695 18 332 3.2E-129 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS07890 b7ed5dc424d35a34fad862ecebccae3d 333 SUPERFAMILY SSF51735 119 288 8.61E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04500 486b37311fb414301a400f9257cf5dc9 222 SUPERFAMILY SSF109604 35 210 6.28E-21 T 23-04-2016 NIAKO_RS04500 486b37311fb414301a400f9257cf5dc9 222 Gene3D G3DSA:1.10.472.50 36 124 2.1E-7 T 23-04-2016 NIAKO_RS04500 486b37311fb414301a400f9257cf5dc9 222 PANTHER PTHR21174 17 221 5.7E-42 T 23-04-2016 IPR009218 Predicted HD phosphohydrolase NIAKO_RS04500 486b37311fb414301a400f9257cf5dc9 222 PIRSF PIRSF035170 6 222 1.3E-47 T 23-04-2016 IPR009218 Predicted HD phosphohydrolase NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762 32 350 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762 372 626 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762 646 777 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 Pfam PF16338 Domain of unknown function (DUF4968) 31 118 1.1E-11 T 23-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 Pfam PF17137 Domain of unknown function (DUF5110) 711 777 1.6E-18 T 23-04-2016 IPR033403 Domain of unknown function DUF5110 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 SUPERFAMILY SSF51445 230 585 1.57E-56 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762:SF86 32 350 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762:SF86 372 626 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 PANTHER PTHR22762:SF86 646 777 1.6E-286 T 23-04-2016 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 Pfam PF01055 Glycosyl hydrolases family 31 220 693 4.0E-126 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 SUPERFAMILY SSF74650 20 224 3.04E-31 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS11970 5acc6304cfa26094fae82f0a0880ca08 796 SUPERFAMILY SSF51011 591 689 1.37E-17 T 23-04-2016 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 SUPERFAMILY SSF47413 5 63 2.76E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 SUPERFAMILY SSF53822 64 342 3.53E-70 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 Pfam PF13377 Periplasmic binding protein-like domain 174 340 4.8E-35 T 23-04-2016 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 SMART SM00354 5 75 3.6E-25 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 Gene3D G3DSA:3.40.50.2300 58 179 5.9E-44 T 23-04-2016 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 PANTHER PTHR30146 5 344 1.8E-105 T 23-04-2016 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.3E-14 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 Gene3D G3DSA:1.10.260.40 6 57 5.0E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26110 e8a1b9857be5dd47b00b95b11b717b57 346 Gene3D G3DSA:3.40.50.2300 180 317 4.8E-43 T 23-04-2016 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 PANTHER PTHR19278:SF1 5 222 6.1E-62 T 23-04-2016 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 Gene3D G3DSA:3.20.20.70 5 254 1.3E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 251 1.1E-65 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 SUPERFAMILY SSF51366 4 256 9.03E-73 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 PANTHER PTHR19278 5 222 6.1E-62 T 23-04-2016 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 16 250 9.3E-26 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS22355 24a4959a8b1bc4cfdfba8ca3213fce31 266 SMART SM00934 16 251 1.3E-45 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 Gene3D G3DSA:3.40.50.1100 110 343 3.8E-84 T 23-04-2016 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 418 4.7E-200 T 23-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 325 416 2.4E-25 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 PANTHER PTHR10314 15 364 7.1E-177 T 23-04-2016 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 SUPERFAMILY SSF55021 335 413 7.78E-10 T 23-04-2016 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 SUPERFAMILY SSF53686 14 362 8.38E-98 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 PANTHER PTHR10314:SF30 15 364 7.1E-177 T 23-04-2016 NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 2.1E-76 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS00515 a57ec688eae64de911a16e5455c34a65 418 Gene3D G3DSA:3.40.50.1100 22 109 7.6E-7 T 23-04-2016 NIAKO_RS10410 9b12be2bd5445817e041f3310a755dbc 142 Pfam PF12833 Helix-turn-helix domain 56 137 2.6E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10410 9b12be2bd5445817e041f3310a755dbc 142 SUPERFAMILY SSF46689 85 137 1.03E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10410 9b12be2bd5445817e041f3310a755dbc 142 Gene3D G3DSA:1.10.10.60 86 137 1.1E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS10410 9b12be2bd5445817e041f3310a755dbc 142 SMART SM00342 50 136 1.5E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03175 8ded0140258ac5c70e7b0f0babcf7571 719 SUPERFAMILY SSF48371 229 441 2.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS03175 8ded0140258ac5c70e7b0f0babcf7571 719 SUPERFAMILY SSF48371 513 575 2.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS03175 8ded0140258ac5c70e7b0f0babcf7571 719 Gene3D G3DSA:1.25.10.10 84 142 2.8E-7 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03175 8ded0140258ac5c70e7b0f0babcf7571 719 Gene3D G3DSA:1.25.10.10 233 411 2.8E-7 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS21830 1112b3249e83d6c3242aaa914a7714d7 182 SUPERFAMILY SSF74653 66 145 1.12E-6 T 23-04-2016 NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 Gene3D G3DSA:3.40.50.300 577 699 1.6E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 Gene3D G3DSA:3.40.50.300 330 516 5.0E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 Pfam PF00270 DEAD/DEAH box helicase 332 515 2.5E-9 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 38 257 3.3E-18 T 23-04-2016 IPR006483 CRISPR-associated Cas3-HD domain NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 SMART SM00487 319 549 7.4E-8 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 SUPERFAMILY SSF52540 339 393 3.7E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 SUPERFAMILY SSF52540 551 691 3.7E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 SUPERFAMILY SSF52540 426 517 3.7E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23680 e50acbecc861c84ebe6be140cf253c91 923 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 344 713 2.0E-41 T 23-04-2016 IPR006474 Helicase Cas3, CRISPR-associated, core NIAKO_RS30460 a3c0ce19cb13866f8c8600356fa7175a 326 Pfam PF12081 GldM N-terminal domain 29 221 1.5E-8 T 23-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Pfam PF00593 TonB dependent receptor 643 1092 4.2E-17 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 220 3.2E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532:SF57 876 1092 1.6E-241 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532:SF57 5 381 1.6E-241 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532:SF57 478 850 1.6E-241 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.60.40.1120 24 110 1.0E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Pfam PF13715 CarboxypepD_reg-like domain 24 107 7.7E-18 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.170.130.10 111 220 1.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 22 1094 1.0E-245 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 221 240 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 317 398 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 1007 1094 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 433 812 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 905 930 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 Gene3D G3DSA:2.40.170.20 962 963 6.4E-67 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 197 226 3.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF56935 104 244 1.79E-87 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF56935 894 940 1.79E-87 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF56935 438 797 1.79E-87 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF56935 997 1094 1.79E-87 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF56935 308 396 1.79E-87 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 SUPERFAMILY SSF49464 22 105 1.57E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532 876 1092 1.6E-241 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532 5 381 1.6E-241 T 23-04-2016 NIAKO_RS20900 1c3522951e5ce6249616845660d82469 1094 PANTHER PTHR11532 478 850 1.6E-241 T 23-04-2016 NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 Pfam PF13585 C-terminal domain of CHU protein family 807 891 2.9E-20 T 23-04-2016 NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 SUPERFAMILY SSF49299 324 399 1.83E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 Pfam PF00801 PKD domain 412 472 2.6E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 SMART SM00089 402 486 1.9E-7 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 SMART SM00089 317 400 3.7E-8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 Gene3D G3DSA:2.60.40.670 411 482 5.2E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 Gene3D G3DSA:2.60.40.670 322 397 5.3E-14 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 SUPERFAMILY SSF49299 403 486 4.19E-13 T 23-04-2016 IPR000601 PKD domain NIAKO_RS36765 0f54a40aeeedac168945e6fb74fd2102 895 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 809 895 1.5E-15 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 Pfam PF00892 EamA-like transporter family 13 145 2.0E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 Pfam PF00892 EamA-like transporter family 162 300 1.7E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 PANTHER PTHR32322 2 305 5.2E-70 T 23-04-2016 NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 SUPERFAMILY SSF103481 196 304 9.94E-16 T 23-04-2016 NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 SUPERFAMILY SSF103481 46 146 1.27E-9 T 23-04-2016 NIAKO_RS31365 e859d2118c6ffd9ec07f856e4f43a3ae 308 PANTHER PTHR32322:SF8 2 305 5.2E-70 T 23-04-2016 NIAKO_RS06325 ec50b260d920cb718eb67b1fca0f8916 235 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 82 104 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS06325 ec50b260d920cb718eb67b1fca0f8916 235 Pfam PF01066 CDP-alcohol phosphatidyltransferase 30 104 1.4E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS35610 607f57db2b31549a446de325f6aedbb6 156 Gene3D G3DSA:3.30.1330.40 52 156 3.1E-34 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS35610 607f57db2b31549a446de325f6aedbb6 156 SUPERFAMILY SSF55298 49 156 2.2E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS35610 607f57db2b31549a446de325f6aedbb6 156 Pfam PF01042 Endoribonuclease L-PSP 53 155 7.5E-21 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS35610 607f57db2b31549a446de325f6aedbb6 156 PANTHER PTHR11803 58 156 8.3E-25 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 PANTHER PTHR10859 756 881 1.8E-55 T 23-04-2016 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 PANTHER PTHR10859 921 1158 1.8E-55 T 23-04-2016 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Gene3D G3DSA:3.90.550.10 775 1051 6.2E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Gene3D G3DSA:3.20.20.370 485 704 5.3E-54 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Pfam PF13632 Glycosyl transferase family group 2 923 1079 2.5E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SUPERFAMILY SSF88713 487 698 1.9E-49 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Pfam PF00535 Glycosyl transferase family 2 778 879 6.3E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SUPERFAMILY SSF53448 919 1067 2.17E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SUPERFAMILY SSF53448 761 880 2.17E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Pfam PF01522 Polysaccharide deacetylase 491 595 2.2E-27 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 PANTHER PTHR10859:SF99 756 881 1.8E-55 T 23-04-2016 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 PANTHER PTHR10859:SF99 921 1158 1.8E-55 T 23-04-2016 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Pfam PF00704 Glycosyl hydrolases family 18 170 406 8.8E-20 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SUPERFAMILY SSF51445 378 416 1.16E-32 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SUPERFAMILY SSF51445 120 323 1.16E-32 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Gene3D G3DSA:3.20.20.80 121 326 7.5E-29 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 Gene3D G3DSA:3.20.20.80 383 417 7.5E-29 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS04920 602b26ee54bc666813ffc7803f8a6e29 1175 SMART SM00636 116 407 5.5E-7 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 NIAKO_RS17600 1cd4b972b9ba9c2f876695a4e4c2e809 202 PANTHER PTHR20857:SF21 2 185 1.1E-13 T 23-04-2016 NIAKO_RS17600 1cd4b972b9ba9c2f876695a4e4c2e809 202 Pfam PF02581 Thiamine monophosphate synthase/TENI 13 181 1.0E-12 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS17600 1cd4b972b9ba9c2f876695a4e4c2e809 202 SUPERFAMILY SSF51391 11 191 6.67E-19 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NIAKO_RS17600 1cd4b972b9ba9c2f876695a4e4c2e809 202 Gene3D G3DSA:3.20.20.70 2 197 1.6E-38 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS17600 1cd4b972b9ba9c2f876695a4e4c2e809 202 PANTHER PTHR20857 2 185 1.1E-13 T 23-04-2016 NIAKO_RS13245 d36b1841d3ae3d43026ecdabafcadeb7 92 SUPERFAMILY SSF46785 6 56 9.25E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS13245 d36b1841d3ae3d43026ecdabafcadeb7 92 Pfam PF08279 HTH domain 18 53 2.8E-6 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 NIAKO_RS13245 d36b1841d3ae3d43026ecdabafcadeb7 92 Gene3D G3DSA:1.10.10.10 8 64 1.8E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25450 7c5dc3f41b8bfa6800f23c112b7645c6 273 Gene3D G3DSA:3.40.50.1820 44 256 7.1E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25450 7c5dc3f41b8bfa6800f23c112b7645c6 273 PANTHER PTHR23024:SF156 30 250 1.0E-31 T 23-04-2016 NIAKO_RS25450 7c5dc3f41b8bfa6800f23c112b7645c6 273 SUPERFAMILY SSF53474 46 264 3.52E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25450 7c5dc3f41b8bfa6800f23c112b7645c6 273 Pfam PF07859 alpha/beta hydrolase fold 62 168 2.5E-17 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS25450 7c5dc3f41b8bfa6800f23c112b7645c6 273 PANTHER PTHR23024 30 250 1.0E-31 T 23-04-2016 NIAKO_RS06985 710a5dfdcf843813cba462221394d37d 264 Pfam PF04338 Protein of unknown function, DUF481 79 246 3.8E-12 T 23-04-2016 IPR007433 Protein of unknown function DUF481 NIAKO_RS16765 239bd5df0145f1c14561a997b8f4882a 68 Gene3D G3DSA:1.10.10.10 15 66 6.6E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16765 239bd5df0145f1c14561a997b8f4882a 68 SUPERFAMILY SSF46955 15 65 2.11E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 Gene3D G3DSA:3.20.20.70 2 274 4.2E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 PANTHER PTHR22960 1 278 2.9E-119 T 23-04-2016 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 SMART SM00729 11 211 5.7E-8 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 326 3.2E-105 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 Pfam PF04055 Radical SAM superfamily 16 173 7.9E-31 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 SUPERFAMILY SSF102114 2 270 3.01E-66 T 23-04-2016 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 180 298 4.9E-33 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 Pfam PF13353 4Fe-4S single cluster domain 18 119 6.2E-9 T 23-04-2016 NIAKO_RS02710 2d50c962d6b73143d595ae37bd7d46b4 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 Gene3D G3DSA:2.40.170.20 171 663 9.7E-51 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 SUPERFAMILY SSF56935 37 663 9.52E-56 T 23-04-2016 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 PANTHER PTHR32552 418 667 7.7E-14 T 23-04-2016 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 PANTHER PTHR32552:SF31 418 667 7.7E-14 T 23-04-2016 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 142 1.4E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 Pfam PF00593 TonB dependent receptor 420 663 1.4E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15215 78b3d621c2ef9167f48352b684cbc558 668 Gene3D G3DSA:2.170.130.10 35 136 4.2E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 Gene3D G3DSA:2.80.10.50 356 498 3.6E-23 T 23-04-2016 NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 SUPERFAMILY SSF50370 352 499 1.19E-32 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 Pfam PF00149 Calcineurin-like phosphoesterase 45 261 1.6E-6 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 SUPERFAMILY SSF56300 43 271 4.05E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 Gene3D G3DSA:3.60.21.10 43 196 1.0E-10 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 451 499 7.3E-9 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS31465 84c8f5670c3e63c0ff98b5bc17d86975 501 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 351 436 4.3E-16 T 23-04-2016 IPR000772 Ricin B, lectin domain NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 16 463 6.8E-134 T 23-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 Pfam PF02397 Bacterial sugar transferase 272 456 9.9E-57 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 Pfam PF13727 CoA-binding domain 77 235 4.6E-13 T 23-04-2016 NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 PANTHER PTHR30576 6 462 2.4E-123 T 23-04-2016 NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 459 5.4E-124 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NIAKO_RS00430 1fefa9685f0a50ad7263b76c5cfcd274 463 PANTHER PTHR30576:SF0 6 462 2.4E-123 T 23-04-2016 NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 PANTHER PTHR24220:SF86 6 224 7.1E-99 T 23-04-2016 NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 Pfam PF00005 ABC transporter 24 170 1.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 Gene3D G3DSA:3.40.50.300 2 223 1.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 PANTHER PTHR24220 6 224 7.1E-99 T 23-04-2016 NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 SUPERFAMILY SSF52540 4 222 6.21E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01050 054724a4a9072b1fb72ca482aa6d1459 226 SMART SM00382 33 218 7.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS14425 94f15b1867a7fd6fd3a1cd90540ac082 286 SUPERFAMILY SSF53335 105 243 1.59E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14425 94f15b1867a7fd6fd3a1cd90540ac082 286 Gene3D G3DSA:3.40.50.150 105 242 6.1E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS06565 f650cb42a7298092b829ab4ac1a8179d 382 Pfam PF11376 Protein of unknown function (DUF3179) 106 376 1.8E-57 T 23-04-2016 IPR021516 Protein of unknown function DUF3179 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 Gene3D G3DSA:3.50.50.60 3 199 5.4E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 SUPERFAMILY SSF51905 153 312 9.07E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 198 1.2E-31 T 23-04-2016 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 SUPERFAMILY SSF51905 3 199 4.89E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 PANTHER PTHR23023 3 375 3.8E-93 T 23-04-2016 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 PIRSF PIRSF000332 5 339 2.7E-26 T 23-04-2016 IPR012143 Dimethylaniline monooxygenase, N-oxide-forming GO:0004499|GO:0050660|GO:0050661|GO:0055114 KEGG: 00982+1.14.13.8 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 163 187 6.8E-9 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.8E-9 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 6.8E-9 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS23640 0d99e5609a8525f9ac24f84e9e3a48b5 377 Gene3D G3DSA:3.50.50.60 289 354 1.6E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS18150 b1aed62c06dd545efbebbc5416ceb29e 183 Gene3D G3DSA:2.30.110.10 3 128 1.5E-12 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS18150 b1aed62c06dd545efbebbc5416ceb29e 183 SUPERFAMILY SSF50475 7 103 3.4E-7 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS18150 b1aed62c06dd545efbebbc5416ceb29e 183 PANTHER PTHR39336 2 178 1.3E-70 T 23-04-2016 NIAKO_RS18150 b1aed62c06dd545efbebbc5416ceb29e 183 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 98 1.7E-8 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS18150 b1aed62c06dd545efbebbc5416ceb29e 183 PANTHER PTHR39336:SF2 2 178 1.3E-70 T 23-04-2016 NIAKO_RS13225 31f0047ac24a2747fdd8b5be9cdc3a4c 473 PANTHER PTHR30354:SF0 66 473 3.6E-123 T 23-04-2016 NIAKO_RS13225 31f0047ac24a2747fdd8b5be9cdc3a4c 473 PANTHER PTHR30354:SF0 1 45 3.6E-123 T 23-04-2016 NIAKO_RS13225 31f0047ac24a2747fdd8b5be9cdc3a4c 473 PANTHER PTHR30354 66 473 3.6E-123 T 23-04-2016 NIAKO_RS13225 31f0047ac24a2747fdd8b5be9cdc3a4c 473 PANTHER PTHR30354 1 45 3.6E-123 T 23-04-2016 NIAKO_RS13225 31f0047ac24a2747fdd8b5be9cdc3a4c 473 Pfam PF02447 GntP family permease 6 467 4.8E-83 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS33595 f71f9e63359eece07a96d9ee5d6f9773 288 SUPERFAMILY SSF51445 60 280 5.73E-23 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS33595 f71f9e63359eece07a96d9ee5d6f9773 288 PANTHER PTHR34154 24 283 2.0E-51 T 23-04-2016 NIAKO_RS33595 f71f9e63359eece07a96d9ee5d6f9773 288 Gene3D G3DSA:3.20.20.80 97 280 1.1E-16 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS33595 f71f9e63359eece07a96d9ee5d6f9773 288 Pfam PF11790 Glycosyl hydrolase catalytic core 61 277 5.3E-57 T 23-04-2016 IPR024655 Uncharacterised protein family, glycosyl hydrolase catalytic domain NIAKO_RS19245 c887d1696f7d116ad31e69d77170d460 148 PANTHER PTHR26402 7 133 9.0E-28 T 23-04-2016 NIAKO_RS19245 c887d1696f7d116ad31e69d77170d460 148 Gene3D G3DSA:3.40.50.2300 7 133 1.1E-27 T 23-04-2016 NIAKO_RS19245 c887d1696f7d116ad31e69d77170d460 148 SMART SM00448 7 118 7.3E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19245 c887d1696f7d116ad31e69d77170d460 148 SUPERFAMILY SSF52172 5 131 8.54E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19245 c887d1696f7d116ad31e69d77170d460 148 Pfam PF00072 Response regulator receiver domain 9 117 1.8E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS05660 f5e70dc6177b95d3b4d767ef0613e761 209 Pfam PF13568 Outer membrane protein beta-barrel domain 29 186 3.8E-21 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 PANTHER PTHR10459 119 542 4.7E-70 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Pfam PF04675 DNA ligase N terminus 3 174 8.1E-17 T 23-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Gene3D G3DSA:3.30.470.30 245 358 2.0E-26 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 539 2.6E-185 T 23-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 240 248 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Gene3D G3DSA:3.30.1490.70 212 244 9.5E-20 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Gene3D G3DSA:3.30.1490.70 371 414 9.5E-20 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Pfam PF04679 ATP dependent DNA ligase C terminal region 435 524 3.7E-13 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 PANTHER PTHR10459:SF10 119 542 4.7E-70 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Pfam PF01068 ATP dependent DNA ligase domain 234 414 1.8E-30 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 SUPERFAMILY SSF56091 214 414 7.2E-52 T 23-04-2016 NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 Gene3D G3DSA:2.40.50.140 419 539 4.0E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24895 a3b392dfa0342fbce679c9361a5f9189 544 SUPERFAMILY SSF50249 419 540 9.25E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 ProSitePatterns PS00018 EF-hand calcium-binding domain. 951 963 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532:SF57 509 540 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532:SF57 134 478 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532:SF57 639 1131 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 533 761 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 944 1006 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 1050 1133 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 425 502 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 792 894 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF56935 217 362 1.19E-61 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532 509 540 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532 134 478 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 PANTHER PTHR11532 639 1131 6.5E-298 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 Gene3D G3DSA:2.170.130.10 216 337 6.5E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 Gene3D G3DSA:2.60.40.1120 136 212 6.9E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 Pfam PF07715 TonB-dependent Receptor Plug Domain 232 334 3.4E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 310 340 7.6E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 Pfam PF13715 CarboxypepD_reg-like domain 137 206 8.3E-14 T 23-04-2016 NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 SUPERFAMILY SSF49464 135 208 1.18E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS15945 36785dd160e1464ce6c709cdbef39661 1133 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 136 1133 3.4E-287 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Gene3D G3DSA:3.30.559.10 214 451 6.7E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Gene3D G3DSA:4.10.320.10 126 177 8.7E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 SUPERFAMILY SSF47005 124 172 2.35E-7 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Pfam PF00364 Biotin-requiring enzyme 6 77 1.8E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Gene3D G3DSA:2.40.50.100 3 89 3.4E-25 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 224 451 4.7E-80 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151:SF8 191 207 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151:SF8 223 450 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151:SF8 3 174 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 SUPERFAMILY SSF52777 222 451 5.78E-82 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 Pfam PF02817 e3 binding domain 131 168 1.6E-8 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151 191 207 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151 223 450 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 PANTHER PTHR23151 3 174 3.6E-144 T 23-04-2016 NIAKO_RS21655 6e49524cf762b2cee1e0664bf6137e6c 457 SUPERFAMILY SSF51230 2 92 5.23E-24 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS29250 3e80b2f40d1eb4c11930008cb614b7a2 669 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 596 669 1.6E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS29250 3e80b2f40d1eb4c11930008cb614b7a2 669 PANTHER PTHR40446:SF1 45 393 3.9E-19 T 23-04-2016 NIAKO_RS29250 3e80b2f40d1eb4c11930008cb614b7a2 669 Gene3D G3DSA:2.60.120.260 460 543 0.001 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS29250 3e80b2f40d1eb4c11930008cb614b7a2 669 Pfam PF09992 Phosphodiester glycosidase 218 382 7.2E-28 T 23-04-2016 IPR018711 Phosphodiester glycosidase NIAKO_RS29250 3e80b2f40d1eb4c11930008cb614b7a2 669 PANTHER PTHR40446 45 393 3.9E-19 T 23-04-2016 NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 Gene3D G3DSA:3.20.20.150 10 324 8.9E-71 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 PANTHER PTHR12110 99 338 3.5E-27 T 23-04-2016 NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 PANTHER PTHR12110 8 80 3.5E-27 T 23-04-2016 NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 PANTHER PTHR12110:SF17 99 338 3.5E-27 T 23-04-2016 NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 PANTHER PTHR12110:SF17 8 80 3.5E-27 T 23-04-2016 NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 1.1E-31 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 SUPERFAMILY SSF51658 8 323 1.24E-63 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30795 046dd2880c39678f197a6279584cfe18 351 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 6.6E-23 T 23-04-2016 IPR011418 AP endonuclease, family 2, C-terminal NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 509 529 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 686 712 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 144 157 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 551 580 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 240 255 4.1E-29 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PANTHER PTHR30523:SF0 91 859 1.9E-182 T 23-04-2016 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 PANTHER PTHR30523 91 859 1.9E-182 T 23-04-2016 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 Pfam PF00311 Phosphoenolpyruvate carboxylase 309 851 1.7E-126 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 Pfam PF00311 Phosphoenolpyruvate carboxylase 141 289 2.5E-21 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NIAKO_RS00545 988c630c98a1b0307fc2e7146ae2eefa 859 SUPERFAMILY SSF51621 36 843 9.42E-212 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 23-04-2016 IPR020845 AMP-binding, conserved site NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Gene3D G3DSA:3.40.50.980 48 219 1.4E-26 T 23-04-2016 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 556 3.0E-22 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Gene3D G3DSA:3.30.300.30 464 565 3.6E-27 T 23-04-2016 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 SUPERFAMILY SSF56801 39 569 3.14E-142 T 23-04-2016 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Gene3D G3DSA:2.30.38.10 383 463 6.0E-20 T 23-04-2016 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Pfam PF00501 AMP-binding enzyme 53 469 5.1E-81 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 PANTHER PTHR24095 43 578 9.4E-176 T 23-04-2016 NIAKO_RS11305 3c39ecaf18b04a67b73665f2dc323683 578 Gene3D G3DSA:3.40.50.980 220 382 4.3E-30 T 23-04-2016 NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 370 7.9E-119 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 SUPERFAMILY SSF53383 14 375 1.26E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 Gene3D G3DSA:3.90.1150.10 252 375 8.9E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 PANTHER PTHR30244 1 376 1.4E-112 T 23-04-2016 NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 Gene3D G3DSA:3.40.640.10 15 250 9.7E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 PIRSF PIRSF000390 3 376 8.2E-106 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS24695 6e5724cef72470797bbd76007d8d0102 376 PANTHER PTHR30244:SF15 1 376 1.4E-112 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 PANTHER PTHR11532 15 430 1.4E-132 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 PANTHER PTHR11532 519 1043 1.4E-132 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 221 7.2E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF56935 948 1045 6.59E-74 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF56935 315 403 6.59E-74 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF56935 847 891 6.59E-74 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF56935 436 792 6.59E-74 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF56935 101 245 6.59E-74 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.170.130.10 107 221 5.4E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1045 2.5E-162 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.60.40.1120 24 106 6.8E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 SUPERFAMILY SSF49464 23 102 1.57E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 PANTHER PTHR11532:SF51 15 430 1.4E-132 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 PANTHER PTHR11532:SF51 519 1043 1.4E-132 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Pfam PF13715 CarboxypepD_reg-like domain 25 104 3.3E-14 T 23-04-2016 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.40.170.20 222 265 4.1E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.40.170.20 956 1045 4.1E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.40.170.20 440 816 4.1E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.40.170.20 857 889 4.1E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18790 24333d4620256f4de19832c558d1d775 1045 Gene3D G3DSA:2.40.170.20 322 389 4.1E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 SUPERFAMILY SSF52743 154 368 3.14E-63 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 23-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 Pfam PF00082 Subtilase family 164 368 7.5E-35 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 Pfam PF05922 Peptidase inhibitor I9 55 130 2.1E-4 T 23-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 199 209 - T 23-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 Gene3D G3DSA:3.40.50.200 121 369 2.0E-66 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 356 366 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PANTHER PTHR10795:SF389 48 368 1.4E-57 T 23-04-2016 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PANTHER PTHR10795:SF389 1 27 1.4E-57 T 23-04-2016 NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 195 208 9.3E-19 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 355 371 9.3E-19 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 9.3E-19 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PANTHER PTHR10795 48 368 1.4E-57 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 PANTHER PTHR10795 1 27 1.4E-57 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 SUPERFAMILY SSF54897 50 131 4.25E-6 T 23-04-2016 IPR009020 Proteinase inhibitor, propeptide NIAKO_RS30635 ffe13169ad2e3ea4dd84744f4d304518 395 Gene3D G3DSA:3.30.70.80 48 120 1.7E-8 T 23-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 NIAKO_RS08710 157d5be8ab53a663ac1d896e23c09ef6 366 Pfam PF06114 Domain of unknown function (DUF955) 201 283 2.5E-4 T 23-04-2016 IPR010359 HTH domain, IrrE-type NIAKO_RS17900 d9878a73ec5f6465e3c403a5699f03a3 583 PANTHER PTHR11819 5 541 1.3E-112 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17900 d9878a73ec5f6465e3c403a5699f03a3 583 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 478 4.5E-78 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17900 d9878a73ec5f6465e3c403a5699f03a3 583 Pfam PF00474 Sodium:solute symporter family 40 478 1.5E-50 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17900 d9878a73ec5f6465e3c403a5699f03a3 583 PANTHER PTHR11819:SF7 5 541 1.3E-112 T 23-04-2016 NIAKO_RS34965 7f96e72a2d4f106214a33fb9ef3c7e3d 390 PANTHER PTHR12526 23 367 5.2E-18 T 23-04-2016 NIAKO_RS34965 7f96e72a2d4f106214a33fb9ef3c7e3d 390 Gene3D G3DSA:3.40.50.2000 197 302 1.7E-11 T 23-04-2016 NIAKO_RS34965 7f96e72a2d4f106214a33fb9ef3c7e3d 390 SUPERFAMILY SSF53756 22 367 2.56E-40 T 23-04-2016 NIAKO_RS34965 7f96e72a2d4f106214a33fb9ef3c7e3d 390 Pfam PF00534 Glycosyl transferases group 1 204 348 3.3E-14 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 684 844 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 106 242 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 336 424 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 1016 1107 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 885 936 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF56935 468 654 1.47E-46 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1107 1.9E-121 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 217 1.2E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532:SF51 21 491 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532:SF51 596 691 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532:SF51 734 1105 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.40.170.20 747 846 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.40.170.20 475 673 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.40.170.20 713 714 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.40.170.20 883 923 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.40.170.20 340 441 1.2E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 SUPERFAMILY SSF49464 26 107 7.32E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.170.130.10 108 228 7.0E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532 21 491 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532 596 691 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 PANTHER PTHR11532 734 1105 3.1E-94 T 23-04-2016 NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Gene3D G3DSA:2.60.40.1120 28 107 3.0E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS13355 e023c7881a18534655626eb286424122 1107 Pfam PF13715 CarboxypepD_reg-like domain 28 109 1.0E-17 T 23-04-2016 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Gene3D G3DSA:3.40.50.300 489 723 1.0E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Gene3D G3DSA:1.20.1560.10 160 468 3.0E-59 T 23-04-2016 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Pfam PF03412 Peptidase C39 family 4 122 5.9E-35 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 ProSitePatterns PS00211 ABC transporters family signature. 629 643 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Gene3D G3DSA:3.90.70.10 11 123 3.2E-19 T 23-04-2016 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Pfam PF00005 ABC transporter 506 657 2.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 Pfam PF00664 ABC transporter transmembrane region 176 441 6.6E-22 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 PANTHER PTHR24221 151 729 7.6E-143 T 23-04-2016 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 SMART SM00382 515 703 3.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 SUPERFAMILY SSF90123 156 468 2.22E-55 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NIAKO_RS18655 0f0e7fbd5c47aee27498b089c945978e 732 SUPERFAMILY SSF52540 478 727 3.66E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 Gene3D G3DSA:3.40.50.1700 425 679 9.8E-68 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PANTHER PTHR30620 15 77 8.9E-243 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PANTHER PTHR30620 112 793 8.9E-243 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 Gene3D G3DSA:3.20.20.300 41 415 7.6E-96 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 Pfam PF14310 Fibronectin type III-like domain 712 781 9.7E-22 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 243 259 1.1E-21 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 317 335 1.1E-21 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 142 158 1.1E-21 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 211 227 1.1E-21 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 165 184 1.1E-21 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 127 400 3.3E-59 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 SUPERFAMILY SSF51445 41 438 1.05E-90 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PANTHER PTHR30620:SF37 15 77 8.9E-243 T 23-04-2016 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 PANTHER PTHR30620:SF37 112 793 8.9E-243 T 23-04-2016 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 SMART SM01217 712 781 2.4E-31 T 23-04-2016 IPR026891 Fibronectin type III-like domain NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 SUPERFAMILY SSF52279 439 507 8.11E-52 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 SUPERFAMILY SSF52279 532 679 8.11E-52 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS00275 e7fce179caa13c2ff42cadb97196f901 793 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 439 676 1.1E-55 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NIAKO_RS08110 24dffff71bad58cd74d733c2d1adebe5 131 Pfam PF14087 Domain of unknown function (DUF4267) 17 120 4.2E-19 T 23-04-2016 IPR025363 Protein of unknown function DUF4267 NIAKO_RS27880 e22d08d93fa68ffcf575abd8faf2c41f 526 Pfam PF13777 Domain of unknown function (DUF4173) 267 453 8.2E-45 T 23-04-2016 IPR025231 Domain of unknown function DUF4173 NIAKO_RS33675 835c8209e855f554e6850f9c880e96cd 75 Pfam PF14375 Cysteine-rich CWC 9 54 2.1E-12 T 23-04-2016 IPR032720 Cysteine-rich CWC NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF56935 850 914 2.09E-20 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF56935 492 814 2.09E-20 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF56935 105 246 2.09E-20 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF56935 335 445 2.09E-20 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF56935 282 288 2.09E-20 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 SUPERFAMILY SSF49464 22 124 2.59E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.60.40.1120 23 123 1.4E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.40.170.20 849 897 3.0E-4 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.40.170.20 494 817 3.0E-4 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.40.170.20 331 428 3.0E-4 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.40.170.20 220 282 3.0E-4 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Pfam PF13620 Carboxypeptidase regulatory-like domain 22 97 8.6E-8 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Pfam PF14905 Outer membrane protein beta-barrel family 472 915 1.5E-22 T 23-04-2016 NIAKO_RS20925 b574106643532da7da782342ecd914de 934 Gene3D G3DSA:2.170.130.10 132 212 5.8E-4 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS04330 54ca0db378cd573c11424db445b458bc 281 Pfam PF12395 Protein of unknown function 159 264 4.0E-27 T 23-04-2016 IPR022123 Protein of unknown function DUF3658 NIAKO_RS04330 54ca0db378cd573c11424db445b458bc 281 Pfam PF08874 Domain of unknown function (DUF1835) 2 126 1.9E-28 T 23-04-2016 IPR014973 Protein of unknown function DUF1835 NIAKO_RS06660 b16c3663a5355cdf18c7b02186d3a72d 582 Pfam PF07980 SusD family 318 582 2.2E-50 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06660 b16c3663a5355cdf18c7b02186d3a72d 582 SUPERFAMILY SSF48452 19 582 4.93E-110 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06660 b16c3663a5355cdf18c7b02186d3a72d 582 Pfam PF14322 Starch-binding associating with outer membrane 55 235 6.8E-14 T 23-04-2016 NIAKO_RS06660 b16c3663a5355cdf18c7b02186d3a72d 582 Gene3D G3DSA:1.25.40.10 405 506 6.6E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06660 b16c3663a5355cdf18c7b02186d3a72d 582 Gene3D G3DSA:1.25.40.10 216 342 6.6E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 Gene3D G3DSA:3.30.70.20 182 251 5.7E-9 T 23-04-2016 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 PANTHER PTHR30002:SF4 1 304 1.0E-121 T 23-04-2016 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 Pfam PF13484 4Fe-4S double cluster binding domain 186 250 5.3E-19 T 23-04-2016 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 SUPERFAMILY SSF54862 181 278 4.6E-14 T 23-04-2016 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 Pfam PF08331 Domain of unknown function (DUF1730) 60 132 7.1E-22 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 4 309 44.719 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 PANTHER PTHR30002 1 304 1.0E-121 T 23-04-2016 NIAKO_RS04710 89306822c5d7eeb74a45e29529013e9f 309 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 305 4.9E-96 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 306 326 7.0E-24 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 242 268 7.0E-24 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 92 118 7.0E-24 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 276 296 7.0E-24 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 192 214 7.0E-24 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PANTHER PTHR30009:SF0 501 544 2.7E-57 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PANTHER PTHR30009:SF0 50 453 2.7E-57 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 352 545 1.8E-15 T 23-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 Pfam PF01578 Cytochrome C assembly protein 104 327 3.1E-24 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PANTHER PTHR30009 501 544 2.7E-57 T 23-04-2016 NIAKO_RS07470 0b3c67fe2a8b56b63f16a005e20181a1 806 PANTHER PTHR30009 50 453 2.7E-57 T 23-04-2016 NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 SUPERFAMILY SSF53218 3 194 8.77E-36 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 PANTHER PTHR13939 4 418 4.0E-151 T 23-04-2016 NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Gene3D G3DSA:3.40.980.10 2 89 1.7E-33 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Gene3D G3DSA:3.40.980.10 136 173 1.7E-33 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 267 411 2.0E-45 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 6 413 1.6E-94 T 23-04-2016 IPR008135 Competence-induced protein CinA NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Pfam PF00994 Probable molybdopterin binding domain 8 173 4.9E-33 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 SMART SM00852 7 175 2.9E-33 T 23-04-2016 IPR001453 MoaB/Mog domain NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Pfam PF02464 Competence-damaged protein 263 413 2.6E-54 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Gene3D G3DSA:3.90.950.20 256 414 3.0E-52 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 PANTHER PTHR13939:SF0 4 418 4.0E-151 T 23-04-2016 NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 SUPERFAMILY SSF142433 257 414 3.4E-51 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 418 132.388 T 23-04-2016 IPR008135 Competence-induced protein CinA NIAKO_RS21650 cbfd74fc96768aacdad6950f26d4cd86 418 PIRSF PIRSF006728 3 418 2.8E-125 T 23-04-2016 IPR008135 Competence-induced protein CinA NIAKO_RS20200 19eeb6bbe20e4d4229749458e9537b64 431 Pfam PF00578 AhpC/TSA family 34 149 6.7E-7 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS20200 19eeb6bbe20e4d4229749458e9537b64 431 Pfam PF12543 Protein of unknown function (DUF3738) 277 423 9.8E-7 T 23-04-2016 IPR017801 Soil-associated protein DUF3738 NIAKO_RS20200 19eeb6bbe20e4d4229749458e9537b64 431 SUPERFAMILY SSF52833 1 155 7.74E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20200 19eeb6bbe20e4d4229749458e9537b64 431 Gene3D G3DSA:3.40.30.10 2 171 9.2E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 SUPERFAMILY SSF52540 1 238 7.37E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 SMART SM00382 26 211 6.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 PANTHER PTHR24220:SF434 3 240 4.2E-113 T 23-04-2016 NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 Gene3D G3DSA:3.40.50.300 1 235 1.3E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 Pfam PF00005 ABC transporter 18 162 3.1E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS20630 61ee492ea8b19a2918cbbc129c59aa84 264 PANTHER PTHR24220 3 240 4.2E-113 T 23-04-2016 NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 Pfam PF00905 Penicillin binding protein transpeptidase domain 58 246 9.7E-22 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 PANTHER PTHR30627 53 159 1.1E-21 T 23-04-2016 NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 SUPERFAMILY SSF56601 23 249 4.75E-32 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 ProSitePatterns PS00337 Beta-lactamase class-D active site. 66 76 - T 23-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 PANTHER PTHR30627:SF6 53 159 1.1E-21 T 23-04-2016 NIAKO_RS32925 638eba6912bd282c5931cbf29c2541cd 273 Gene3D G3DSA:3.40.710.10 25 268 5.8E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 212 247 1.9E-7 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 285 315 1.9E-5 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 69 103 8.0E-6 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 249 282 2.6E-5 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 105 139 5.2E-7 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 141 175 2.7E-7 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 177 210 4.0E-8 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Pfam PF08238 Sel1 repeat 320 355 1.6E-8 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Gene3D G3DSA:1.25.40.10 35 132 1.6E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Gene3D G3DSA:1.25.40.10 133 207 4.8E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Gene3D G3DSA:1.25.40.10 279 363 7.8E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 Gene3D G3DSA:1.25.40.10 208 278 1.3E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SUPERFAMILY SSF81901 196 363 5.58E-47 T 23-04-2016 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SUPERFAMILY SSF81901 38 219 7.5E-47 T 23-04-2016 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 PANTHER PTHR11102:SF11 54 365 1.5E-81 T 23-04-2016 NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 284 319 3.0E-8 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 176 211 4.5E-9 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 140 175 5.2E-11 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 248 283 1.3E-7 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 36 67 190.0 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 104 139 6.6E-7 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 68 103 2.0E-8 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 212 247 4.6E-11 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 SMART SM00671 320 355 9.1E-10 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS22725 0fb40dddfe2b364bce545a4b9830082a 370 PANTHER PTHR11102 54 365 1.5E-81 T 23-04-2016 NIAKO_RS14795 a6ad28488b080271b9828a6e41de2fe7 880 PANTHER PTHR38454 1 865 1.1E-19 T 23-04-2016 NIAKO_RS14795 a6ad28488b080271b9828a6e41de2fe7 880 PANTHER PTHR38454:SF1 1 865 1.1E-19 T 23-04-2016 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 Gene3D G3DSA:3.90.180.10 1 149 2.3E-45 T 23-04-2016 IPR011032 GroES-like NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 PANTHER PTHR11695:SF294 13 326 1.4E-98 T 23-04-2016 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 SMART SM00829 10 323 2.7E-47 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 SUPERFAMILY SSF51735 116 293 1.08E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 SUPERFAMILY SSF50129 1 148 2.43E-38 T 23-04-2016 IPR011032 GroES-like NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 Gene3D G3DSA:3.40.50.720 150 239 4.7E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 Pfam PF13602 Zinc-binding dehydrogenase 190 323 1.7E-21 T 23-04-2016 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 86 1.9E-10 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS18370 4087c01bee24c74b974fda40fa78bd4d 326 PANTHER PTHR11695 13 326 1.4E-98 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS23840 4fdb1d6ba4667424d82be1b57cbafb41 167 Gene3D G3DSA:1.20.120.450 5 150 1.9E-27 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS23840 4fdb1d6ba4667424d82be1b57cbafb41 167 Pfam PF05163 DinB family 1 149 1.5E-24 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS23840 4fdb1d6ba4667424d82be1b57cbafb41 167 SUPERFAMILY SSF109854 6 147 2.01E-26 T 23-04-2016 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 8.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 8.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 Gene3D G3DSA:1.10.357.10 147 249 4.6E-4 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 SMART SM00342 213 296 1.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 Pfam PF12833 Helix-turn-helix domain 220 297 1.1E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 Gene3D G3DSA:1.10.10.60 251 298 9.0E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 PANTHER PTHR11019:SF50 63 299 2.1E-34 T 23-04-2016 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 PANTHER PTHR11019 63 299 2.1E-34 T 23-04-2016 NIAKO_RS11160 b8d9d9debce20f0a074cc90e236c325b 300 SUPERFAMILY SSF46689 251 299 3.32E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 Gene3D G3DSA:3.40.50.720 37 180 8.6E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 43 167 9.2E-16 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 PANTHER PTHR22604 218 423 2.2E-109 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 PANTHER PTHR22604 1 202 2.2E-109 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 SUPERFAMILY SSF51735 32 200 4.24E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 PANTHER PTHR22604:SF122 218 423 2.2E-109 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 PANTHER PTHR22604:SF122 1 202 2.2E-109 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 Gene3D G3DSA:3.30.360.10 181 414 4.7E-26 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 SUPERFAMILY SSF55347 241 377 7.19E-20 T 23-04-2016 NIAKO_RS30815 31b18c0d10c193485d4e7ac2872b4f79 443 SUPERFAMILY SSF55347 176 213 7.19E-20 T 23-04-2016 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 46 147 4.2E-29 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 Pfam PF16387 Domain of unknown function 203 276 1.2E-10 T 23-04-2016 IPR032160 Domain of unknown function DUF4996 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 Gene3D G3DSA:3.20.20.190 35 279 2.5E-49 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 PANTHER PTHR23344 11 281 2.8E-48 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 SUPERFAMILY SSF51695 41 276 6.7E-51 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS35080 4ced50d7ad53ff23ce9d72ce819e65a3 286 PANTHER PTHR23344:SF20 11 281 2.8E-48 T 23-04-2016 NIAKO_RS14800 0e2b9ac5595d9a072fcaf1b010381e8e 373 SUPERFAMILY SSF53756 16 370 1.83E-33 T 23-04-2016 NIAKO_RS14800 0e2b9ac5595d9a072fcaf1b010381e8e 373 Pfam PF13692 Glycosyl transferases group 1 208 344 8.9E-17 T 23-04-2016 NIAKO_RS14800 0e2b9ac5595d9a072fcaf1b010381e8e 373 Pfam PF13439 Glycosyltransferase Family 4 22 178 2.5E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS35230 fdb2a470961194c30a7056fa2d770139 205 Gene3D G3DSA:3.40.50.1000 83 183 5.1E-19 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS35230 fdb2a470961194c30a7056fa2d770139 205 Gene3D G3DSA:3.40.50.1000 2 18 5.1E-19 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS35230 fdb2a470961194c30a7056fa2d770139 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 179 1.5E-13 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS35230 fdb2a470961194c30a7056fa2d770139 205 SUPERFAMILY SSF56784 1 189 8.12E-21 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS01545 d5037be74284b98af64e53cdaf9fef6a 409 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 44 391 5.7E-66 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NIAKO_RS01545 d5037be74284b98af64e53cdaf9fef6a 409 Pfam PF02401 LytB protein 44 390 1.1E-75 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NIAKO_RS01545 d5037be74284b98af64e53cdaf9fef6a 409 PANTHER PTHR31619 36 404 1.3E-87 T 23-04-2016 NIAKO_RS00045 0c48d345c39033c05bf86b6b4bbc6b5a 104 SMART SM00360 2 75 1.0E-29 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS00045 0c48d345c39033c05bf86b6b4bbc6b5a 104 PANTHER PTHR24012 1 104 3.8E-32 T 23-04-2016 NIAKO_RS00045 0c48d345c39033c05bf86b6b4bbc6b5a 104 Gene3D G3DSA:3.30.70.330 2 94 2.5E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS00045 0c48d345c39033c05bf86b6b4bbc6b5a 104 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 9.3E-25 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS00045 0c48d345c39033c05bf86b6b4bbc6b5a 104 SUPERFAMILY SSF54928 2 102 3.09E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 Pfam PF07980 SusD family 374 647 1.6E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 SUPERFAMILY SSF48452 29 578 4.68E-86 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 SUPERFAMILY SSF48452 613 647 4.68E-86 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 Pfam PF14322 Starch-binding associating with outer membrane 103 249 3.1E-18 T 23-04-2016 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 Gene3D G3DSA:1.25.40.10 449 544 8.7E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 Gene3D G3DSA:1.25.40.10 231 328 8.7E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15845 4a4da60a6dc8cc4be70aaab691e614ec 671 Gene3D G3DSA:1.25.40.10 374 388 8.7E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 277 361 3.6E-17 T 23-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 PANTHER PTHR30595:SF6 1 382 1.2E-31 T 23-04-2016 NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 Gene3D G3DSA:1.10.10.10 396 444 8.8E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 SUPERFAMILY SSF46785 395 446 4.14E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 Pfam PF04326 Putative DNA-binding domain 3 108 2.5E-13 T 23-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 PANTHER PTHR30595 1 382 1.2E-31 T 23-04-2016 NIAKO_RS23485 7ab1307ce4a27f3408d5bbad7d78c63d 454 Pfam PF13412 Winged helix-turn-helix DNA-binding 396 439 3.2E-6 T 23-04-2016 NIAKO_RS34295 2280eab3ce0f958af4651c146ee61ae2 210 SMART SM00448 94 204 2.8E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34295 2280eab3ce0f958af4651c146ee61ae2 210 Pfam PF00072 Response regulator receiver domain 96 205 1.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34295 2280eab3ce0f958af4651c146ee61ae2 210 Gene3D G3DSA:3.40.50.2300 90 209 8.2E-37 T 23-04-2016 NIAKO_RS34295 2280eab3ce0f958af4651c146ee61ae2 210 SUPERFAMILY SSF52172 92 209 2.85E-33 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS34295 2280eab3ce0f958af4651c146ee61ae2 210 PANTHER PTHR24423 58 210 8.8E-42 T 23-04-2016 NIAKO_RS11435 7abf89ae12ea9f4f6f0c9c85cd2b7cac 285 PANTHER PTHR21461:SF15 4 274 5.3E-21 T 23-04-2016 NIAKO_RS11435 7abf89ae12ea9f4f6f0c9c85cd2b7cac 285 Pfam PF01697 Glycosyltransferase family 92 7 210 6.2E-16 T 23-04-2016 IPR008166 Glycosyltransferase family 92 NIAKO_RS11435 7abf89ae12ea9f4f6f0c9c85cd2b7cac 285 PANTHER PTHR21461 4 274 5.3E-21 T 23-04-2016 NIAKO_RS15130 fe24a9bed3163b9f8b4cb674597774ca 479 PANTHER PTHR35148 1 477 1.2E-58 T 23-04-2016 NIAKO_RS15130 fe24a9bed3163b9f8b4cb674597774ca 479 Pfam PF12771 Starch-binding associating with outer membrane 3 478 2.2E-62 T 23-04-2016 NIAKO_RS15130 fe24a9bed3163b9f8b4cb674597774ca 479 SUPERFAMILY SSF48452 20 478 4.17E-129 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 179 3.9E-42 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 Gene3D G3DSA:1.10.1740.10 10 104 5.2E-19 T 23-04-2016 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 Pfam PF08281 Sigma-70, region 4 125 172 5.1E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 Gene3D G3DSA:1.10.10.10 121 181 3.2E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 177 2.4E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 Pfam PF04542 Sigma-70 region 2 33 91 3.6E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 PANTHER PTHR30173:SF20 1 190 9.0E-40 T 23-04-2016 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 SUPERFAMILY SSF88946 12 107 8.24E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 PANTHER PTHR30173 1 190 9.0E-40 T 23-04-2016 NIAKO_RS21600 cdad3fc81e58c7085016c6cc6f5b1f03 194 SUPERFAMILY SSF88659 109 180 3.71E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 Gene3D G3DSA:3.40.50.300 1 219 3.0E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 PANTHER PTHR24220 3 223 2.1E-121 T 23-04-2016 NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 SMART SM00382 30 217 7.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 PANTHER PTHR24220:SF342 3 223 2.1E-121 T 23-04-2016 NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 Pfam PF00005 ABC transporter 21 169 6.7E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS05935 6b5a848a5a360feecaf80035ed96708f 225 SUPERFAMILY SSF52540 1 220 1.25E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35190 d2beb03f096e2be150ded1e6051b4780 150 Pfam PF13924 Lipocalin-like domain 79 138 4.7E-5 T 23-04-2016 IPR024311 Lipocalin-like domain NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 PIRSF PIRSF000089 1 320 1.6E-90 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 Gene3D G3DSA:3.40.50.1220 189 316 1.3E-52 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 SUPERFAMILY SSF52467 193 314 5.45E-45 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 196 278 7.5E-33 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 Pfam PF01012 Electron transfer flavoprotein domain 3 177 7.0E-29 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 Gene3D G3DSA:3.40.50.620 3 187 3.8E-36 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 PANTHER PTHR10909:SF294 130 313 2.0E-40 T 23-04-2016 NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 PANTHER PTHR10909 130 313 2.0E-40 T 23-04-2016 NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 SMART SM00893 3 195 1.1E-22 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NIAKO_RS20335 777a2347b8f30ce504b8e060666bc950 322 SUPERFAMILY SSF52402 3 187 1.74E-35 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 SUPERFAMILY SSF55347 247 366 1.13E-13 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 SUPERFAMILY SSF55347 192 214 1.13E-13 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 46 182 3.5E-14 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 PANTHER PTHR22604:SF122 267 461 3.5E-79 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 PANTHER PTHR22604:SF122 1 248 3.5E-79 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 SUPERFAMILY SSF51735 36 214 1.68E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 Gene3D G3DSA:3.40.50.720 40 203 4.4E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 Gene3D G3DSA:3.30.360.10 204 452 7.9E-16 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 PANTHER PTHR22604 267 461 3.5E-79 T 23-04-2016 NIAKO_RS09410 db71cde87e358135acbbf53c59c4e2ab 481 PANTHER PTHR22604 1 248 3.5E-79 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Pfam PF07715 TonB-dependent Receptor Plug Domain 116 221 2.0E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 SUPERFAMILY SSF49464 23 97 1.2E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532:SF57 526 553 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532:SF57 1 313 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532:SF57 592 1072 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532:SF57 329 417 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.40.170.20 339 816 6.3E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.40.170.20 226 245 6.3E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.40.170.20 901 943 6.3E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.40.170.20 990 1073 6.3E-46 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 SUPERFAMILY SSF56935 330 809 4.4E-79 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 SUPERFAMILY SSF56935 102 246 4.4E-79 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 SUPERFAMILY SSF56935 893 936 4.4E-79 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 SUPERFAMILY SSF56935 983 1073 4.4E-79 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1073 3.3E-232 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Pfam PF13715 CarboxypepD_reg-like domain 25 106 1.7E-15 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.170.130.10 116 225 6.1E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 Gene3D G3DSA:2.60.40.1120 25 114 9.2E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 197 227 1.6E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532 526 553 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532 1 313 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532 592 1072 6.9E-222 T 23-04-2016 NIAKO_RS05990 d3e69bb6bb547cb751d5c5501b122793 1074 PANTHER PTHR11532 329 417 6.9E-222 T 23-04-2016 NIAKO_RS11275 aebf416d332bb56167aedea9f19ba90a 99 Gene3D G3DSA:3.40.30.10 2 94 6.8E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11275 aebf416d332bb56167aedea9f19ba90a 99 SUPERFAMILY SSF52833 2 94 6.03E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11275 aebf416d332bb56167aedea9f19ba90a 99 PANTHER PTHR10438 1 75 1.4E-15 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS11275 aebf416d332bb56167aedea9f19ba90a 99 Pfam PF00085 Thioredoxin 2 92 2.3E-16 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 SUPERFAMILY SSF51161 78 253 4.44E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 Gene3D G3DSA:2.160.10.10 141 260 7.8E-28 T 23-04-2016 NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 PANTHER PTHR23416 87 253 5.2E-70 T 23-04-2016 NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 Gene3D G3DSA:1.10.3130.10 21 140 2.5E-31 T 23-04-2016 NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 209 243 4.3E-4 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 161 196 0.0012 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS34350 e4c1e4528d19134f48f9dff17ed5891f 275 PANTHER PTHR23416:SF65 87 253 5.2E-70 T 23-04-2016 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 SUPERFAMILY SSF56003 128 784 1.44E-191 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 125 185 1.2E-46 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 296 373 1.2E-46 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.90.1170.50 3 124 2.1E-41 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 186 294 4.6E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 27 135 3.4E-32 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 SUPERFAMILY SSF54665 3 156 4.06E-44 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 SMART SM01008 27 136 2.7E-43 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 PANTHER PTHR11908 606 789 3.1E-292 T 23-04-2016 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 PANTHER PTHR11908 7 588 3.1E-292 T 23-04-2016 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 377 468 2.5E-64 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 635 784 2.5E-64 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 720 4.8E-163 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 PANTHER PTHR11908:SF76 606 789 3.1E-292 T 23-04-2016 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 PANTHER PTHR11908:SF76 7 588 3.1E-292 T 23-04-2016 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 Gene3D G3DSA:3.30.365.10 469 634 6.3E-56 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NIAKO_RS25350 c4447b3c797a355016a8ed8a91248763 790 TIGRFAM TIGR02416 CO_dehy_Mo_lg: carbon-monoxide dehydrogenase, large subunit 21 781 0.0 T 23-04-2016 IPR012780 Carbon-monoxide dehydrogenase, large subunit GO:0005507|GO:0018492|GO:0030151 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 Gene3D G3DSA:3.30.420.10 3 157 4.9E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 Pfam PF00929 Exonuclease 8 154 8.3E-21 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 SUPERFAMILY SSF53098 3 159 7.6E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 PANTHER PTHR30231:SF10 1 160 1.6E-46 T 23-04-2016 NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 PANTHER PTHR30231 1 160 1.6E-46 T 23-04-2016 NIAKO_RS23555 b66421d39408271e205faa8589202cff 163 SMART SM00479 5 163 2.9E-23 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 Gene3D G3DSA:3.40.50.970 14 189 3.2E-48 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 Gene3D G3DSA:3.40.50.920 190 318 4.4E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 PANTHER PTHR11624 17 319 9.0E-91 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 Pfam PF02780 Transketolase, C-terminal domain 190 311 5.4E-32 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 SMART SM00861 13 178 1.9E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 PANTHER PTHR11624:SF2 17 319 9.0E-91 T 23-04-2016 NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 SUPERFAMILY SSF52518 8 174 7.7E-45 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 SUPERFAMILY SSF52922 186 319 2.49E-36 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS00305 5fd20a5d65b7a53afbaa970d80f083d2 319 Pfam PF02779 Transketolase, pyrimidine binding domain 17 175 6.9E-30 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 PANTHER PTHR26402 2 211 1.2E-48 T 23-04-2016 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 SMART SM00421 150 207 1.7E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 Gene3D G3DSA:3.40.50.2300 1 157 9.0E-26 T 23-04-2016 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.3E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 SUPERFAMILY SSF46894 146 213 6.12E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 Pfam PF00072 Response regulator receiver domain 4 115 6.3E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 PANTHER PTHR26402:SF151 2 211 1.2E-48 T 23-04-2016 NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 SUPERFAMILY SSF52172 1 127 2.7E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 Gene3D G3DSA:1.10.10.10 158 213 5.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS27480 39167843d3f4f6a2525284d2f322855d 214 SMART SM00448 2 115 3.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PIRSF PIRSF500210 5 339 6.4E-117 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PIRSF PIRSF000904 5 339 2.9E-115 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PANTHER PTHR11556 3 339 2.9E-160 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 Gene3D G3DSA:3.40.190.80 203 336 2.6E-54 T 23-04-2016 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 10 200 5.6E-66 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 155 178 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 186 209 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 71 97 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 212 239 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 311 336 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 34 61 1.1E-64 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 9 337 40.204 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 SUPERFAMILY SSF56655 3 335 5.63E-106 T 23-04-2016 NIAKO_RS10315 b07cc2c6a07c59d6a52038364a3d90d8 339 Gene3D G3DSA:3.30.540.10 10 202 4.0E-71 T 23-04-2016 NIAKO_RS19765 a37336bb46104e27ebfab4593c910dd2 416 SUPERFAMILY SSF75011 202 415 2.62E-26 T 23-04-2016 NIAKO_RS19765 a37336bb46104e27ebfab4593c910dd2 416 Gene3D G3DSA:2.130.10.10 80 117 4.0E-30 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19765 a37336bb46104e27ebfab4593c910dd2 416 Gene3D G3DSA:2.130.10.10 207 413 4.0E-30 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS19765 a37336bb46104e27ebfab4593c910dd2 416 SUPERFAMILY SSF75011 74 240 2.62E-7 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 Gene3D G3DSA:1.10.10.10 1 84 1.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 Gene3D G3DSA:3.40.190.10 171 270 4.6E-18 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 SUPERFAMILY SSF53850 89 298 1.92E-35 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 Gene3D G3DSA:3.40.190.10 90 170 6.9E-18 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-36 T 23-04-2016 IPR005119 LysR, substrate-binding NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 SUPERFAMILY SSF46785 1 83 1.18E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 PANTHER PTHR30419:SF4 1 298 1.0E-80 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 PANTHER PTHR30419 1 298 1.0E-80 T 23-04-2016 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS36125 283aad7ae73499007536375f955148dd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.1E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 211 220 - T 23-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 PANTHER PTHR10091:SF0 28 379 8.5E-167 T 23-04-2016 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 PIRSF PIRSF005096 35 379 2.1E-139 T 23-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 SUPERFAMILY SSF74650 45 377 3.64E-123 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 Pfam PF01263 Aldose 1-epimerase 55 376 1.5E-99 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 Gene3D G3DSA:2.70.98.10 47 378 1.9E-143 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS03460 e7bd025858c5246343e9a21a5908fdce 379 PANTHER PTHR10091 28 379 8.5E-167 T 23-04-2016 NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 SUPERFAMILY SSF111331 2 296 3.27E-62 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 Gene3D G3DSA:3.40.50.10330 49 97 2.5E-4 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 291 1.9E-37 T 23-04-2016 IPR005218 Diacylglycerol/lipid kinase NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 SMART SM00046 4 129 1.7E-11 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 PANTHER PTHR12358 1 295 1.8E-40 T 23-04-2016 NIAKO_RS32125 ff38f818cdb787dc76256f4f88ba3e39 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 118 2.1E-23 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 294 312 2.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 246 2.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:3.40.50.300 195 254 1.7E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Pfam PF01926 50S ribosome-binding GTPase 226 341 2.4E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 127 6.9E-38 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 461 32.798 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:3.40.50.300 294 387 2.4E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:1.20.120.430 391 461 2.9E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:1.20.120.430 129 189 2.9E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:1.20.120.430 255 278 2.9E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 PANTHER PTHR11649:SF56 13 461 3.6E-145 T 23-04-2016 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Pfam PF12631 MnmE helical domain 130 458 6.6E-51 T 23-04-2016 IPR025867 MnmE, helical domain NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 364 1.3E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 Gene3D G3DSA:3.30.1360.120 8 128 2.8E-44 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 PANTHER PTHR11649 13 461 3.6E-145 T 23-04-2016 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 461 5.7E-124 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 SUPERFAMILY SSF116878 128 227 9.02E-47 T 23-04-2016 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 SUPERFAMILY SSF116878 386 461 9.02E-47 T 23-04-2016 NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 SUPERFAMILY SSF52540 80 159 3.72E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34870 37de7dd458797e1a2f2501ad09c96dcf 461 SUPERFAMILY SSF52540 195 379 3.72E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 30 422 1.2E-160 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 423 39.984 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PANTHER PTHR21256:SF2 13 423 3.7E-220 T 23-04-2016 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PIRSF PIRSF000099 1 423 3.2E-167 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 Gene3D G3DSA:3.40.50.1980 25 236 1.6E-74 T 23-04-2016 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 SUPERFAMILY SSF53720 26 422 4.51E-76 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 196 221 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 166 192 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 131 157 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 357 375 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 316 341 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PRINTS PR00083 Histidinol dehydrogenase signature 30 54 6.0E-92 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 PANTHER PTHR21256 13 423 3.7E-220 T 23-04-2016 NIAKO_RS22035 a24607025fb96b5f1ff081a297fa1c48 423 Pfam PF00815 Histidinol dehydrogenase 17 423 1.2E-170 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 Gene3D G3DSA:3.30.420.40 144 281 7.1E-45 T 23-04-2016 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 Pfam PF00480 ROK family 7 302 2.5E-69 T 23-04-2016 IPR000600 ROK family NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 Gene3D G3DSA:3.30.420.40 6 143 3.7E-36 T 23-04-2016 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 PANTHER PTHR18964:SF123 5 302 3.8E-70 T 23-04-2016 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 SUPERFAMILY SSF53067 5 302 1.08E-60 T 23-04-2016 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 PANTHER PTHR18964 5 302 3.8E-70 T 23-04-2016 NIAKO_RS31275 9b0eafa824a2c4ed95fc88df01ac26d6 303 ProSitePatterns PS01125 ROK family signature. 141 168 - T 23-04-2016 IPR000600 ROK family NIAKO_RS19960 2ff76085d623ea9144cc88eec8234eb6 504 SUPERFAMILY SSF48452 17 214 1.02E-45 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19960 2ff76085d623ea9144cc88eec8234eb6 504 SUPERFAMILY SSF48452 242 502 1.02E-45 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19960 2ff76085d623ea9144cc88eec8234eb6 504 Pfam PF14322 Starch-binding associating with outer membrane 21 209 1.3E-14 T 23-04-2016 NIAKO_RS19960 2ff76085d623ea9144cc88eec8234eb6 504 Gene3D G3DSA:1.25.40.10 240 337 5.7E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19960 2ff76085d623ea9144cc88eec8234eb6 504 Gene3D G3DSA:1.25.40.10 372 426 5.7E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 Gene3D G3DSA:3.20.20.240 6 518 2.6E-223 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 SUPERFAMILY SSF51703 5 518 4.4E-207 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 PANTHER PTHR23408 3 519 3.4E-294 T 23-04-2016 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 6 519 3.0E-233 T 23-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 PANTHER PTHR23408:SF7 3 519 3.4E-294 T 23-04-2016 NIAKO_RS04875 6ae1b82c24b5c33dcf38ba6357028e30 519 Pfam PF01642 Methylmalonyl-CoA mutase 6 516 2.8E-224 T 23-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NIAKO_RS19385 d470e7658477397252568fc19d0819d2 256 Gene3D G3DSA:3.90.1720.10 129 237 5.5E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS19385 d470e7658477397252568fc19d0819d2 256 PANTHER PTHR21666 117 239 4.5E-20 T 23-04-2016 NIAKO_RS19385 d470e7658477397252568fc19d0819d2 256 SUPERFAMILY SSF54001 132 234 2.09E-28 T 23-04-2016 NIAKO_RS19385 d470e7658477397252568fc19d0819d2 256 Pfam PF00877 NlpC/P60 family 143 236 9.3E-20 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 385 8.8E-53 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 SUPERFAMILY SSF111369 87 307 2.75E-25 T 23-04-2016 NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 291 5.9E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 PANTHER PTHR30469 66 384 6.8E-50 T 23-04-2016 NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 Gene3D G3DSA:2.40.50.100 103 134 2.9E-12 T 23-04-2016 NIAKO_RS28590 d600813ecc1144cbc778064f7c3e9803 389 Gene3D G3DSA:2.40.50.100 195 220 2.9E-12 T 23-04-2016 NIAKO_RS12995 5c9548b729b172cabd60665feca0cee3 373 Pfam PF13692 Glycosyl transferases group 1 211 340 4.1E-10 T 23-04-2016 NIAKO_RS12995 5c9548b729b172cabd60665feca0cee3 373 SUPERFAMILY SSF53756 15 371 2.28E-12 T 23-04-2016 NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273:SF2 194 318 9.9E-58 T 23-04-2016 NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273:SF2 334 429 9.9E-58 T 23-04-2016 NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273:SF2 1 126 9.9E-58 T 23-04-2016 NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 Pfam PF16344 Domain of unknown function (DUF4974) 346 426 8.4E-18 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273 194 318 9.9E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273 334 429 9.9E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 PANTHER PTHR30273 1 126 9.9E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20425 b270a702db795a9a1f9135f942fe1048 429 Pfam PF04773 FecR protein 192 287 2.6E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS11820 fd237bf23d03b2ea6ad87aaeb2f293c6 149 Pfam PF07291 Methylamine utilisation protein MauE 9 102 1.4E-5 T 23-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 NIAKO_RS28120 a14b7edc21b8cbad3771b96f0a730231 407 Pfam PF02687 FtsX-like permease family 279 398 1.4E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS28120 a14b7edc21b8cbad3771b96f0a730231 407 PANTHER PTHR30489 4 407 3.9E-48 T 23-04-2016 NIAKO_RS26980 ec22141f0ddd13f0a2404c011580f1c7 831 SUPERFAMILY SSF56935 645 804 2.52E-8 T 23-04-2016 NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 Pfam PF07980 SusD family 235 584 9.4E-14 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 Gene3D G3DSA:1.25.40.10 442 533 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 Gene3D G3DSA:1.25.40.10 201 331 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 Pfam PF14322 Starch-binding associating with outer membrane 40 221 2.4E-10 T 23-04-2016 NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 SUPERFAMILY SSF48452 429 584 3.54E-69 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00260 07b166766927e42f3746beea3febacfd 586 SUPERFAMILY SSF48452 21 372 3.54E-69 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 552 5.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SUPERFAMILY SSF55874 379 551 7.07E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Gene3D G3DSA:1.10.287.130 317 386 2.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Gene3D G3DSA:3.30.450.20 182 291 2.8E-10 T 23-04-2016 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SMART SM00388 325 390 4.9E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SUPERFAMILY SSF52172 572 690 1.18E-34 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SMART SM00387 437 553 7.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Pfam PF00072 Response regulator receiver domain 577 685 1.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Gene3D G3DSA:3.40.50.2300 570 690 3.1E-36 T 23-04-2016 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 195 311 9.5E-7 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SUPERFAMILY SSF55785 183 302 1.37E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SUPERFAMILY SSF47384 310 391 9.61E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Pfam PF13426 PAS domain 202 302 7.3E-9 T 23-04-2016 IPR000014 PAS domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 550 1.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 1.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 1.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 531 1.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 SMART SM00448 574 685 2.9E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 PANTHER PTHR24423 189 685 9.2E-139 T 23-04-2016 NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Gene3D G3DSA:3.30.565.10 398 548 1.4E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37185 704aa3bbbeb17c8c0519c62c9de3d527 694 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 390 1.3E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 PANTHER PTHR10173 43 168 2.3E-54 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 Gene3D G3DSA:2.170.150.20 39 170 5.9E-58 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 SUPERFAMILY SSF51316 43 169 1.41E-54 T 23-04-2016 IPR011057 Mss4-like NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 Pfam PF01641 SelR domain 48 167 1.2E-51 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 44 169 2.0E-51 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NIAKO_RS08645 9fa8a07bfd350112adbe4b9a895e36c3 170 PANTHER PTHR10173:SF18 43 168 2.3E-54 T 23-04-2016 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 Gene3D G3DSA:2.60.40.1120 24 86 4.9E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 Pfam PF13620 Carboxypeptidase regulatory-like domain 24 93 1.3E-9 T 23-04-2016 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 Pfam PF14905 Outer membrane protein beta-barrel family 380 785 1.0E-89 T 23-04-2016 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 Gene3D G3DSA:2.40.170.20 224 786 2.5E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 SUPERFAMILY SSF56935 116 752 1.1E-54 T 23-04-2016 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 SUPERFAMILY SSF49452 21 91 8.24E-8 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS11570 43bb57cef948c99e2d8fb1eb59a8a565 813 Gene3D G3DSA:2.170.130.10 116 223 1.2E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557:SF1 129 159 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557:SF1 16 95 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557:SF1 194 627 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557 129 159 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557 16 95 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 PANTHER PTHR30557 194 627 0.0 T 23-04-2016 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 136 597 56.535 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 Pfam PF01964 Radical SAM ThiC family 138 591 3.2E-202 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 594 7.5E-219 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NIAKO_RS17605 dbf1282240aa6a49b1137083766906b6 628 Pfam PF13667 ThiC-associated domain 16 97 1.1E-31 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NIAKO_RS02190 e2dc0fb7bd4fb928392ae3b2b6f09842 228 Pfam PF01730 UreF 36 186 2.8E-33 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NIAKO_RS02190 e2dc0fb7bd4fb928392ae3b2b6f09842 228 PIRSF PIRSF009467 1 228 3.3E-68 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NIAKO_RS02190 e2dc0fb7bd4fb928392ae3b2b6f09842 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 4 228 27.015 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NIAKO_RS02190 e2dc0fb7bd4fb928392ae3b2b6f09842 228 PANTHER PTHR33620:SF1 3 228 6.8E-51 T 23-04-2016 NIAKO_RS02190 e2dc0fb7bd4fb928392ae3b2b6f09842 228 PANTHER PTHR33620 3 228 6.8E-51 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 SUPERFAMILY SSF51971 9 335 2.94E-37 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 SUPERFAMILY SSF51971 458 516 2.94E-37 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 Pfam PF13450 NAD(P)-binding Rossmann-like domain 14 77 1.6E-12 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 PANTHER PTHR10742:SF279 160 536 6.4E-78 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 PANTHER PTHR10742:SF279 9 126 6.4E-78 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 PANTHER PTHR10742 160 536 6.4E-78 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 PANTHER PTHR10742 9 126 6.4E-78 T 23-04-2016 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 Gene3D G3DSA:3.50.50.60 9 109 1.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS25785 a8cea6443b8107fc3dbdec89bc3b559d 539 Gene3D G3DSA:3.50.50.60 249 355 1.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS06290 c462af3a11e505559ea533fa359acc1f 259 PANTHER PTHR31571 12 257 6.7E-21 T 23-04-2016 NIAKO_RS06290 c462af3a11e505559ea533fa359acc1f 259 Gene3D G3DSA:3.20.20.190 170 255 2.6E-5 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS06290 c462af3a11e505559ea533fa359acc1f 259 SUPERFAMILY SSF51695 28 249 6.02E-12 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS06290 c462af3a11e505559ea533fa359acc1f 259 PANTHER PTHR31571:SF1 12 257 6.7E-21 T 23-04-2016 NIAKO_RS08725 372e34338a1bc33d7c5c1e1535d7426c 889 SUPERFAMILY SSF52540 575 682 4.65E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08725 372e34338a1bc33d7c5c1e1535d7426c 889 SUPERFAMILY SSF52540 383 466 4.65E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08725 372e34338a1bc33d7c5c1e1535d7426c 889 Pfam PF07693 KAP family P-loop domain 394 723 4.3E-17 T 23-04-2016 IPR011646 KAP family P-loop domain NIAKO_RS07225 5ecb0401713e37ad5e11176124fdafb8 394 Pfam PF16323 Domain of unknown function (DUF4959) 19 123 1.8E-37 T 23-04-2016 IPR032527 Domain of unknown function DUF4959 NIAKO_RS07225 5ecb0401713e37ad5e11176124fdafb8 394 Pfam PF16391 Domain of unknown function 250 392 1.9E-39 T 23-04-2016 IPR032164 Domain of unknown function DUF5000 NIAKO_RS07225 5ecb0401713e37ad5e11176124fdafb8 394 Pfam PF17166 Domain of unknown function (DUF5126) 125 227 3.8E-31 T 23-04-2016 IPR033431 Domain of unknown function DUF5126 NIAKO_RS07225 5ecb0401713e37ad5e11176124fdafb8 394 Gene3D G3DSA:2.60.120.260 229 391 2.8E-7 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.9E-25 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 SUPERFAMILY SSF56645 2 247 7.07E-78 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 383 4.3E-51 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Gene3D G3DSA:1.20.140.10 222 384 3.0E-71 T 23-04-2016 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 SUPERFAMILY SSF47203 234 384 3.87E-58 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Gene3D G3DSA:1.10.540.10 1 119 4.9E-41 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 PANTHER PTHR10909:SF10 1 384 4.6E-166 T 23-04-2016 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Gene3D G3DSA:2.40.110.10 126 221 2.1E-37 T 23-04-2016 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.6E-34 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NIAKO_RS04845 f103bdf4a6bbfa760383021c0ef957ce 384 PANTHER PTHR10909 1 384 4.6E-166 T 23-04-2016 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 Gene3D G3DSA:1.10.10.60 212 266 4.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 SMART SM00342 229 312 3.0E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 PANTHER PTHR11019 214 316 9.1E-26 T 23-04-2016 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 Pfam PF12833 Helix-turn-helix domain 235 312 1.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 SUPERFAMILY SSF46689 265 312 3.59E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 Gene3D G3DSA:1.10.10.60 267 312 3.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 SUPERFAMILY SSF46689 213 264 2.87E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS12280 99392658ad4110731532f2ecbf634488 316 PANTHER PTHR11019:SF139 214 316 9.1E-26 T 23-04-2016 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 Gene3D G3DSA:3.10.310.10 1 134 3.0E-40 T 23-04-2016 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 SUPERFAMILY SSF54506 4 119 4.4E-34 T 23-04-2016 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 260 28.179 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 Gene3D G3DSA:3.10.310.10 135 241 1.8E-29 T 23-04-2016 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 SUPERFAMILY SSF54506 124 258 2.43E-32 T 23-04-2016 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 PANTHER PTHR31689 1 264 1.5E-60 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 Pfam PF01678 Diaminopimelate epimerase 131 239 2.6E-13 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 Pfam PF01678 Diaminopimelate epimerase 5 118 5.9E-24 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS21210 eabc2d05b4f49d345e161fa30e64e0c7 264 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 258 6.5E-65 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 Pfam PF00145 C-5 cytosine-specific DNA methylase 7 156 2.2E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 110 123 2.7E-6 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 68 82 2.7E-6 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 Gene3D G3DSA:3.40.50.150 17 160 5.3E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 27 39 - T 23-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 NIAKO_RS16755 8df5a6fe79a72c3339c914583919390e 201 SUPERFAMILY SSF53335 18 198 1.55E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18585 55996b6bd1881aa643cd981d5282aded 489 Gene3D G3DSA:1.25.40.10 225 429 1.0E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18585 55996b6bd1881aa643cd981d5282aded 489 Pfam PF07980 SusD family 351 489 3.2E-24 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS18585 55996b6bd1881aa643cd981d5282aded 489 SUPERFAMILY SSF48452 29 489 1.33E-85 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18585 55996b6bd1881aa643cd981d5282aded 489 Pfam PF14322 Starch-binding associating with outer membrane 33 242 2.7E-26 T 23-04-2016 NIAKO_RS10105 07899e23b60207e8eb7a7f105bae9398 135 Gene3D G3DSA:3.10.590.10 1 132 7.2E-29 T 23-04-2016 IPR002740 EVE domain NIAKO_RS10105 07899e23b60207e8eb7a7f105bae9398 135 Pfam PF01878 EVE domain 2 132 8.4E-47 T 23-04-2016 IPR002740 EVE domain NIAKO_RS10105 07899e23b60207e8eb7a7f105bae9398 135 PANTHER PTHR14087 1 133 7.4E-52 T 23-04-2016 NIAKO_RS10105 07899e23b60207e8eb7a7f105bae9398 135 SUPERFAMILY SSF88697 1 134 3.13E-52 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PANTHER PTHR30485:SF0 11 236 5.0E-57 T 23-04-2016 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 Pfam PF01292 Prokaryotic cytochrome b561 17 221 3.5E-28 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 213 226 6.7E-33 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 182 204 6.7E-33 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 137 156 6.7E-33 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 59 83 6.7E-33 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 20 43 6.7E-33 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 PANTHER PTHR30485 11 236 5.0E-57 T 23-04-2016 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 16 226 4.7E-46 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 SUPERFAMILY SSF81342 12 228 5.69E-38 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NIAKO_RS06200 3fe8ff1bfb649e3d96607a15dbab4ccf 249 Gene3D G3DSA:1.20.950.20 12 227 1.4E-31 T 23-04-2016 NIAKO_RS03705 c548acba57ef5c367642af0203d02470 331 SMART SM00014 157 289 3.1E-9 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS03705 c548acba57ef5c367642af0203d02470 331 SUPERFAMILY SSF48317 96 298 2.22E-31 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS03705 c548acba57ef5c367642af0203d02470 331 Pfam PF01569 PAP2 superfamily 165 294 2.2E-18 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS03705 c548acba57ef5c367642af0203d02470 331 Gene3D G3DSA:1.20.144.10 100 309 1.4E-34 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS05235 78a7037b04652de6b2f124be7aa98e5a 167 Gene3D G3DSA:2.60.120.10 20 163 7.4E-39 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS05235 78a7037b04652de6b2f124be7aa98e5a 167 PANTHER PTHR36440 19 161 9.5E-16 T 23-04-2016 NIAKO_RS05235 78a7037b04652de6b2f124be7aa98e5a 167 SUPERFAMILY SSF51182 19 127 3.05E-25 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS05235 78a7037b04652de6b2f124be7aa98e5a 167 Pfam PF07883 Cupin domain 43 108 1.0E-16 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS05235 78a7037b04652de6b2f124be7aa98e5a 167 PANTHER PTHR36440:SF1 19 161 9.5E-16 T 23-04-2016 NIAKO_RS32205 fac956897e6496b268f130103416af97 296 SUPERFAMILY SSF52540 6 243 1.23E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32205 fac956897e6496b268f130103416af97 296 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 13 262 3.8E-76 T 23-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 NIAKO_RS32205 fac956897e6496b268f130103416af97 296 Gene3D G3DSA:3.40.50.300 45 240 1.2E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32205 fac956897e6496b268f130103416af97 296 PANTHER PTHR23408 6 266 3.9E-72 T 23-04-2016 NIAKO_RS32205 fac956897e6496b268f130103416af97 296 Pfam PF03308 ArgK protein 18 248 1.2E-74 T 23-04-2016 NIAKO_RS32205 fac956897e6496b268f130103416af97 296 PANTHER PTHR23408:SF3 6 266 3.9E-72 T 23-04-2016 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 PANTHER PTHR30026 34 448 4.0E-41 T 23-04-2016 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 Gene3D G3DSA:1.20.1600.10 32 446 1.8E-65 T 23-04-2016 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 Pfam PF02321 Outer membrane efflux protein 257 444 4.5E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 Pfam PF02321 Outer membrane efflux protein 37 216 1.2E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 SUPERFAMILY SSF56954 10 446 5.75E-70 T 23-04-2016 NIAKO_RS19800 34f4ae7a33230a8e64e043e08950217e 448 PANTHER PTHR30026:SF6 34 448 4.0E-41 T 23-04-2016 NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 SUPERFAMILY SSF53092 7 179 3.98E-36 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 SMART SM01011 6 142 4.8E-30 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 SUPERFAMILY SSF55920 180 428 1.96E-64 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 355 367 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 Gene3D G3DSA:3.40.350.10 8 182 1.6E-35 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 132 4.1E-26 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 PANTHER PTHR10804:SF17 11 427 5.8E-96 T 23-04-2016 NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 PANTHER PTHR10804 11 427 5.8E-96 T 23-04-2016 NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 Pfam PF00557 Metallopeptidase family M24 187 406 6.5E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS26900 7e15de40f3023b214e8113638f86555a 430 Gene3D G3DSA:3.90.230.10 183 429 8.0E-68 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 167 2.6E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 Pfam PF08281 Sigma-70, region 4 116 158 3.5E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 SUPERFAMILY SSF88659 116 174 8.5E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 Gene3D G3DSA:1.10.10.10 112 171 2.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 Pfam PF04542 Sigma-70 region 2 20 87 3.3E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 PANTHER PTHR30173 2 179 1.3E-25 T 23-04-2016 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 Gene3D G3DSA:1.10.1740.10 2 105 2.3E-16 T 23-04-2016 NIAKO_RS20075 382e21acad2e240eed657e210b2e7bba 180 SUPERFAMILY SSF88946 5 96 8.01E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS08435 f026a59db98e7149c1e1f75a01b78ef1 344 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 246 2.5E-22 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS08435 f026a59db98e7149c1e1f75a01b78ef1 344 PANTHER PTHR10366:SF267 9 344 3.9E-107 T 23-04-2016 NIAKO_RS08435 f026a59db98e7149c1e1f75a01b78ef1 344 PANTHER PTHR10366 9 344 3.9E-107 T 23-04-2016 NIAKO_RS08435 f026a59db98e7149c1e1f75a01b78ef1 344 SUPERFAMILY SSF51735 7 335 2.59E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08435 f026a59db98e7149c1e1f75a01b78ef1 344 Gene3D G3DSA:3.40.50.720 9 334 6.6E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24490 4955865275432fd49063e9e6e82c00e6 167 Pfam PF12080 GldM C-terminal domain 25 151 2.8E-15 T 23-04-2016 IPR022719 Gliding motility-associated protein GldM, C-terminal NIAKO_RS05445 c5e1f8abc24daffd7920f4ab7a1e74e6 182 Gene3D G3DSA:1.10.340.30 14 169 4.8E-48 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS05445 c5e1f8abc24daffd7920f4ab7a1e74e6 182 Pfam PF03352 Methyladenine glycosylase 16 127 2.0E-40 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 NIAKO_RS05445 c5e1f8abc24daffd7920f4ab7a1e74e6 182 PANTHER PTHR30037 13 182 5.3E-65 T 23-04-2016 NIAKO_RS05445 c5e1f8abc24daffd7920f4ab7a1e74e6 182 SUPERFAMILY SSF48150 14 172 1.04E-49 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS05445 c5e1f8abc24daffd7920f4ab7a1e74e6 182 PANTHER PTHR30037:SF4 13 182 5.3E-65 T 23-04-2016 NIAKO_RS28985 c79ec94c13ca0a7867679f6dd17c45d8 975 Pfam PF13646 HEAT repeats 389 465 1.1E-6 T 23-04-2016 NIAKO_RS28985 c79ec94c13ca0a7867679f6dd17c45d8 975 SUPERFAMILY SSF48371 333 456 5.76E-6 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS28985 c79ec94c13ca0a7867679f6dd17c45d8 975 Gene3D G3DSA:1.25.10.10 345 463 1.0E-5 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS28985 c79ec94c13ca0a7867679f6dd17c45d8 975 Pfam PF13569 Domain of unknown function (DUF4132) 704 880 3.5E-46 T 23-04-2016 IPR025406 Domain of unknown function DUF4132 NIAKO_RS05525 cbc8bac32454134c345733851eb636fc 256 Pfam PF13308 YARHG domain 168 245 1.8E-18 T 23-04-2016 IPR025582 YARHG domain NIAKO_RS05525 cbc8bac32454134c345733851eb636fc 256 SMART SM01324 163 245 1.0E-14 T 23-04-2016 IPR025582 YARHG domain NIAKO_RS32755 1f3514c307e4e9a1ed035cf1a95e39a0 505 Pfam PF00916 Sulfate permease family 12 384 3.4E-55 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NIAKO_RS32755 1f3514c307e4e9a1ed035cf1a95e39a0 505 PANTHER PTHR11814:SF123 12 505 7.1E-177 T 23-04-2016 NIAKO_RS32755 1f3514c307e4e9a1ed035cf1a95e39a0 505 PANTHER PTHR11814 12 505 7.1E-177 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 Pfam PF04397 LytTr DNA-binding domain 151 245 1.5E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 SUPERFAMILY SSF52172 5 131 1.99E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 SMART SM00850 150 246 9.7E-29 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 Gene3D G3DSA:3.40.50.2300 3 128 6.0E-25 T 23-04-2016 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 Pfam PF00072 Response regulator receiver domain 6 114 8.6E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 PANTHER PTHR26402 3 143 3.8E-23 T 23-04-2016 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 Gene3D G3DSA:2.40.50.40 142 211 2.2E-19 T 23-04-2016 NIAKO_RS04215 12795137c28917ccb2a92c98bbd6554e 246 SMART SM00448 3 113 1.7E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS01275 a8468c6ca331b670918294f4c59d7884 172 Gene3D G3DSA:3.40.630.30 2 171 3.2E-46 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01275 a8468c6ca331b670918294f4c59d7884 172 SUPERFAMILY SSF55729 2 166 1.16E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS01275 a8468c6ca331b670918294f4c59d7884 172 Pfam PF13302 Acetyltransferase (GNAT) domain 9 152 4.1E-31 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS01275 a8468c6ca331b670918294f4c59d7884 172 PANTHER PTHR13256 6 158 2.8E-38 T 23-04-2016 NIAKO_RS01275 a8468c6ca331b670918294f4c59d7884 172 PANTHER PTHR13256:SF19 6 158 2.8E-38 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600 193 399 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600 111 158 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600 36 88 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 Gene3D G3DSA:1.10.760.10 279 399 1.3E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 SUPERFAMILY SSF46626 259 399 7.8E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600:SF4 193 399 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600:SF4 111 158 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 PANTHER PTHR30600:SF4 36 88 2.0E-75 T 23-04-2016 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 Gene3D G3DSA:1.10.760.10 74 115 1.3E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 Gene3D G3DSA:1.10.760.10 234 278 1.3E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 142 399 2.9E-70 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase NIAKO_RS03850 29f5625069a73edd354452c877bf16a3 399 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 39 91 9.8E-6 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 PANTHER PTHR30004:SF6 1 348 5.6E-137 T 23-04-2016 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 PANTHER PTHR30004 1 348 5.6E-137 T 23-04-2016 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 334 5.6E-103 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 338 33.268 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 337 2.0E-101 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 SUPERFAMILY SSF53659 3 340 1.49E-98 T 23-04-2016 NIAKO_RS17710 dc2932703f1bcdb03986f9003830ad6b 348 Gene3D G3DSA:3.40.718.10 1 337 3.1E-124 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NIAKO_RS17450 34c2f971eb1d11d1a7964c202ec415fe 514 Pfam PF07980 SusD family 305 514 3.4E-39 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS17450 34c2f971eb1d11d1a7964c202ec415fe 514 SUPERFAMILY SSF48452 20 514 1.2E-117 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17450 34c2f971eb1d11d1a7964c202ec415fe 514 Pfam PF14322 Starch-binding associating with outer membrane 35 219 7.6E-29 T 23-04-2016 NIAKO_RS17450 34c2f971eb1d11d1a7964c202ec415fe 514 Gene3D G3DSA:1.25.40.10 200 444 1.9E-41 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11200 8f4fe7ca5b67c1b01636a016cb6c68f8 190 Pfam PF13590 Domain of unknown function (DUF4136) 26 189 2.1E-23 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 NIAKO_RS28385 e069aeebd6ad3af31e706ad0052429ef 141 Gene3D G3DSA:3.10.490.10 7 136 3.2E-19 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like NIAKO_RS28385 e069aeebd6ad3af31e706ad0052429ef 141 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 8 133 5.1E-17 T 23-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like NIAKO_RS28385 e069aeebd6ad3af31e706ad0052429ef 141 SUPERFAMILY SSF110857 7 135 3.27E-18 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 Gene3D G3DSA:1.10.10.10 4 102 2.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 PANTHER PTHR33154 4 94 4.7E-18 T 23-04-2016 NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 6 21 4.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 4.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 4.8E-10 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 Pfam PF12840 Helix-turn-helix domain 4 62 3.8E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 SMART SM00418 4 85 2.5E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS09445 dd64fdeb150fbf34e6401168ead6664c 106 SUPERFAMILY SSF46785 4 95 5.26E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 Pfam PF10442 FIST C domain 220 357 9.0E-33 T 23-04-2016 IPR019494 FIST, C-domain NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 PANTHER PTHR40252 33 378 1.4E-67 T 23-04-2016 NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 SMART SM00897 26 219 9.1E-38 T 23-04-2016 IPR013702 FIST domain, N-terminal NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 SMART SM01204 220 358 8.7E-44 T 23-04-2016 IPR019494 FIST, C-domain NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 PANTHER PTHR40252:SF1 33 378 1.4E-67 T 23-04-2016 NIAKO_RS30475 c29573187550352c40e3548f1e11c062 379 Pfam PF08495 FIST N domain 29 218 2.3E-30 T 23-04-2016 IPR013702 FIST domain, N-terminal NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PANTHER PTHR19446:SF383 180 397 1.1E-14 T 23-04-2016 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PANTHER PTHR19446 180 397 1.1E-14 T 23-04-2016 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 182 382 5.3E-32 T 23-04-2016 IPR000477 Reverse transcriptase domain NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 Gene3D G3DSA:3.30.70.270 238 251 5.5E-8 T 23-04-2016 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 Gene3D G3DSA:3.30.70.270 301 381 5.5E-8 T 23-04-2016 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 222 236 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 191 203 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 303 316 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 336 347 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 389 395 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 321 334 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 177 190 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 238 256 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 257 267 2.5E-48 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 NIAKO_RS29850 7eba705cb327a31811ee88c953bbabb3 502 SUPERFAMILY SSF56672 165 381 5.34E-14 T 23-04-2016 NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 Pfam PF04960 Glutaminase 52 335 4.5E-99 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 TIGRFAM TIGR03814 Gln_ase: glutaminase A 40 334 3.5E-101 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 Gene3D G3DSA:3.40.710.10 34 336 4.9E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 Hamap MF_00313 Glutaminase [glsA]. 35 336 39.103 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 SUPERFAMILY SSF56601 33 336 7.08E-100 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 PANTHER PTHR12544 32 340 2.4E-131 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 NIAKO_RS10500 7bf49737535f57ac75a15af0e5c9e709 341 PANTHER PTHR12544:SF31 32 340 2.4E-131 T 23-04-2016 NIAKO_RS19440 61845df18da75f48b5b3c47b4d491b73 157 Pfam PF00072 Response regulator receiver domain 19 132 4.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19440 61845df18da75f48b5b3c47b4d491b73 157 SMART SM00448 17 132 8.0E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19440 61845df18da75f48b5b3c47b4d491b73 157 Gene3D G3DSA:3.40.50.2300 16 137 1.7E-26 T 23-04-2016 NIAKO_RS19440 61845df18da75f48b5b3c47b4d491b73 157 PANTHER PTHR26402 17 136 3.3E-22 T 23-04-2016 NIAKO_RS19440 61845df18da75f48b5b3c47b4d491b73 157 SUPERFAMILY SSF52172 11 137 1.99E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 SUPERFAMILY SSF52080 5 148 3.66E-40 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 146 8.4E-46 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 PANTHER PTHR12934 1 148 2.0E-52 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 148 19.893 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 146 1.1E-33 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P NIAKO_RS22905 ab99a9c8134b66498ff559f94df2cb57 149 Gene3D G3DSA:3.100.10.10 32 148 5.3E-30 T 23-04-2016 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Gene3D G3DSA:4.10.1080.10 464 598 5.5E-13 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Pfam PF00691 OmpA family 621 717 9.4E-23 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 PRINTS PR01021 OMPA domain signature 653 668 4.5E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 PRINTS PR01021 OMPA domain signature 622 644 4.5E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 PRINTS PR01021 OMPA domain signature 668 684 4.5E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Pfam PF02412 Thrombospondin type 3 repeat 550 569 0.029 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Pfam PF02412 Thrombospondin type 3 repeat 494 513 0.033 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Pfam PF02412 Thrombospondin type 3 repeat 465 482 0.0026 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 SUPERFAMILY SSF103088 607 723 5.62E-34 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 Gene3D G3DSA:3.30.1330.60 616 723 3.3E-36 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 PANTHER PTHR30128 596 725 2.8E-42 T 23-04-2016 NIAKO_RS36255 a2feea2c3c26ce37c5238f420b88adbe 739 SUPERFAMILY SSF103647 521 598 1.5E-8 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 Gene3D G3DSA:3.40.50.150 63 209 1.2E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 SUPERFAMILY SSF53335 7 286 1.58E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 PANTHER PTHR13600:SF12 65 276 2.6E-43 T 23-04-2016 NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 PANTHER PTHR13600:SF12 4 39 2.6E-43 T 23-04-2016 NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 271 1.3E-53 T 23-04-2016 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 Pfam PF04072 Leucine carboxyl methyltransferase 12 194 1.2E-43 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 PANTHER PTHR13600 65 276 2.6E-43 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS00795 d60cdfce5d4646530571dcaf868c5ddd 290 PANTHER PTHR13600 4 39 2.6E-43 T 23-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS16960 1dddd0de877eb14f2cf20425b3e4f591 533 PANTHER PTHR35148:SF8 1 531 1.5E-104 T 23-04-2016 NIAKO_RS16960 1dddd0de877eb14f2cf20425b3e4f591 533 PANTHER PTHR35148 1 531 1.5E-104 T 23-04-2016 NIAKO_RS16960 1dddd0de877eb14f2cf20425b3e4f591 533 Pfam PF12741 Susd and RagB outer membrane lipoprotein 9 532 1.6E-154 T 23-04-2016 IPR024302 SusD-like NIAKO_RS16960 1dddd0de877eb14f2cf20425b3e4f591 533 SUPERFAMILY SSF48452 21 532 1.14E-125 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 Pfam PF07971 Glycosyl hydrolase family 92 286 774 4.6E-155 T 23-04-2016 IPR012939 Glycosyl hydrolase family 92 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 SUPERFAMILY SSF48208 312 771 2.27E-26 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 Gene3D G3DSA:2.70.98.10 18 369 3.8E-102 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 Gene3D G3DSA:3.30.2080.10 634 780 1.3E-59 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143:SF22 218 240 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143:SF22 1 202 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143:SF22 272 418 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143 272 418 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143 436 777 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 Gene3D G3DSA:1.20.1610.10 510 633 1.6E-42 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 Gene3D G3DSA:1.20.1050.60 394 482 6.8E-25 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 777 2.5E-171 T 23-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143:SF22 436 777 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143 218 240 4.2E-139 T 23-04-2016 NIAKO_RS06670 bbd713ff09b12c9cbfc121a87ec7c331 781 PANTHER PTHR12143 1 202 4.2E-139 T 23-04-2016 NIAKO_RS10850 02e435e6c041795c2779bc68f4e4beff 162 SUPERFAMILY SSF46785 12 125 6.48E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS10850 02e435e6c041795c2779bc68f4e4beff 162 SMART SM00347 29 130 0.0022 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS10850 02e435e6c041795c2779bc68f4e4beff 162 Gene3D G3DSA:1.10.10.10 13 128 1.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS10850 02e435e6c041795c2779bc68f4e4beff 162 Pfam PF12802 MarR family 38 94 1.3E-12 T 23-04-2016 NIAKO_RS10850 02e435e6c041795c2779bc68f4e4beff 162 PANTHER PTHR33164 9 156 1.2E-14 T 23-04-2016 NIAKO_RS28525 bee3e6178b24481779f3f224c98a4cf4 281 PANTHER PTHR23083 145 257 5.8E-15 T 23-04-2016 NIAKO_RS28525 bee3e6178b24481779f3f224c98a4cf4 281 Pfam PF14559 Tetratricopeptide repeat 210 257 9.7E-6 T 23-04-2016 NIAKO_RS28525 bee3e6178b24481779f3f224c98a4cf4 281 SUPERFAMILY SSF48452 145 256 1.14E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28525 bee3e6178b24481779f3f224c98a4cf4 281 Gene3D G3DSA:1.25.40.10 145 257 1.3E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21120 0f3d612c3e99910676673a9ead26a83f 142 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 128 141 0.063 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 NIAKO_RS21120 0f3d612c3e99910676673a9ead26a83f 142 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 50 61 0.34 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 NIAKO_RS21120 0f3d612c3e99910676673a9ead26a83f 142 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 89 100 0.25 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 NIAKO_RS18850 c8670f39cba5946c5b50ee05970170b9 223 Gene3D G3DSA:3.40.30.10 53 217 6.7E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18850 c8670f39cba5946c5b50ee05970170b9 223 PANTHER PTHR10681 180 202 5.5E-22 T 23-04-2016 NIAKO_RS18850 c8670f39cba5946c5b50ee05970170b9 223 PANTHER PTHR10681 64 161 5.5E-22 T 23-04-2016 NIAKO_RS18850 c8670f39cba5946c5b50ee05970170b9 223 SUPERFAMILY SSF52833 52 217 4.41E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18850 c8670f39cba5946c5b50ee05970170b9 223 Pfam PF00578 AhpC/TSA family 56 196 6.4E-24 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS28415 751867ca2cc8767695d1eaa38661a6ca 188 SUPERFAMILY SSF101874 31 183 3.4E-20 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS28415 751867ca2cc8767695d1eaa38661a6ca 188 Gene3D G3DSA:2.40.128.110 56 183 5.1E-17 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS28415 751867ca2cc8767695d1eaa38661a6ca 188 Pfam PF04264 YceI-like domain 52 182 1.4E-12 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 Gene3D G3DSA:1.10.1740.10 8 89 6.3E-13 T 23-04-2016 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 PANTHER PTHR30173 7 172 5.9E-24 T 23-04-2016 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 172 1.1E-16 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 Gene3D G3DSA:1.10.10.10 116 174 3.8E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 1.5E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 1.5E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 SUPERFAMILY SSF88946 7 96 3.06E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 Pfam PF08281 Sigma-70, region 4 120 171 5.8E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 SUPERFAMILY SSF88659 115 172 5.67E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20570 b2054b5b48f084f9e4f40c031e5e2a0d 189 SMART SM00421 126 183 5.6E-4 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS03075 a5dca7bcbc1f78389a208d46917f8f23 156 Gene3D G3DSA:3.10.450.50 36 146 5.9E-8 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS03075 a5dca7bcbc1f78389a208d46917f8f23 156 SUPERFAMILY SSF54427 32 148 1.2E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS33845 7c2c0df457abe42bcdad4b67a0c83124 283 PANTHER PTHR34138:SF1 3 264 3.5E-34 T 23-04-2016 NIAKO_RS33845 7c2c0df457abe42bcdad4b67a0c83124 283 PANTHER PTHR34138 3 264 3.5E-34 T 23-04-2016 NIAKO_RS33845 7c2c0df457abe42bcdad4b67a0c83124 283 Pfam PF04085 rod shape-determining protein MreC 117 264 2.4E-35 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 Pfam PF13229 Right handed beta helix region 298 430 2.1E-5 T 23-04-2016 NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 188 198 - T 23-04-2016 IPR025660 Cysteine peptidase, histidine active site NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SUPERFAMILY SSF51126 61 356 4.56E-47 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 164 196 210.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 133 162 1800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 202 227 1200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 303 324 86.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 331 353 540.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 421 442 2800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SMART SM00710 229 251 900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 SUPERFAMILY SSF51126 291 519 4.85E-16 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17200 b0c34a11c1e9df5eb5ea8c909c2d5f48 520 Gene3D G3DSA:2.160.20.10 35 518 1.9E-44 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS13490 84d20fb45a358d70a07e362e2f2d7b92 172 SUPERFAMILY SSF52172 25 148 2.42E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS13490 84d20fb45a358d70a07e362e2f2d7b92 172 PANTHER PTHR26402 26 148 3.2E-27 T 23-04-2016 NIAKO_RS13490 84d20fb45a358d70a07e362e2f2d7b92 172 Pfam PF00072 Response regulator receiver domain 29 144 5.2E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13490 84d20fb45a358d70a07e362e2f2d7b92 172 Gene3D G3DSA:3.40.50.2300 22 146 4.1E-30 T 23-04-2016 NIAKO_RS13490 84d20fb45a358d70a07e362e2f2d7b92 172 SMART SM00448 26 144 1.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 PIRSF PIRSF000303 3 171 2.0E-56 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 PANTHER PTHR11592 1 150 1.8E-62 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 PRINTS PR01011 Glutathione peroxidase family signature 36 53 1.2E-16 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 PRINTS PR01011 Glutathione peroxidase family signature 136 145 1.2E-16 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 PRINTS PR01011 Glutathione peroxidase family signature 70 86 1.2E-16 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 Gene3D G3DSA:3.40.30.10 15 165 6.2E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 SUPERFAMILY SSF52833 15 163 4.78E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 ProSitePatterns PS00460 Glutathione peroxidases active site. 38 53 - T 23-04-2016 IPR029759 Glutathione peroxidase active site NIAKO_RS28555 73ebeef122c4dfaac08b48dd834b05a9 171 Pfam PF00255 Glutathione peroxidase 17 123 5.8E-36 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS02900 8da9797bb00e634320e465853ae86e76 114 PANTHER PTHR33204:SF8 1 110 1.4E-25 T 23-04-2016 NIAKO_RS02900 8da9797bb00e634320e465853ae86e76 114 SUPERFAMILY SSF46785 10 110 3.54E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02900 8da9797bb00e634320e465853ae86e76 114 Gene3D G3DSA:1.10.10.10 5 110 1.0E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02900 8da9797bb00e634320e465853ae86e76 114 Pfam PF01638 HxlR-like helix-turn-helix 20 107 1.2E-22 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS02900 8da9797bb00e634320e465853ae86e76 114 PANTHER PTHR33204 1 110 1.4E-25 T 23-04-2016 NIAKO_RS07205 b0471d4adede5a83c6d4d2fef05566b7 528 PANTHER PTHR11819 2 505 6.9E-100 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS07205 b0471d4adede5a83c6d4d2fef05566b7 528 Pfam PF00474 Sodium:solute symporter family 35 439 3.8E-43 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS07205 b0471d4adede5a83c6d4d2fef05566b7 528 PANTHER PTHR11819:SF7 2 505 6.9E-100 T 23-04-2016 NIAKO_RS07205 b0471d4adede5a83c6d4d2fef05566b7 528 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 440 1.3E-73 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 PANTHER PTHR30173:SF24 3 197 1.0E-29 T 23-04-2016 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 PANTHER PTHR30173 3 197 1.0E-29 T 23-04-2016 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 192 1.7E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 Pfam PF04542 Sigma-70 region 2 32 97 2.7E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 54 85 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 Gene3D G3DSA:1.10.1740.10 10 119 2.2E-30 T 23-04-2016 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 Gene3D G3DSA:1.10.10.10 143 196 1.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 SUPERFAMILY SSF88946 11 106 9.42E-27 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20970 b34679dca7d2b3b087561114ff23dddc 290 SUPERFAMILY SSF88659 140 195 6.54E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 PANTHER PTHR34183 27 116 1.3E-47 T 23-04-2016 NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 SUPERFAMILY SSF50685 26 116 3.42E-15 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 Pfam PF03330 Lytic transglycolase 27 116 6.7E-28 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 Gene3D G3DSA:2.40.40.10 64 116 2.6E-7 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 PANTHER PTHR34183:SF2 27 116 1.3E-47 T 23-04-2016 NIAKO_RS07115 0e13ceab7990201090bd3f2c2b7be52d 123 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 31 117 1.8E-40 T 23-04-2016 IPR012997 Rare lipoprotein A NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 PANTHER PTHR19211 4 567 1.8E-178 T 23-04-2016 NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Pfam PF00005 ABC transporter 20 184 7.6E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Pfam PF00005 ABC transporter 333 467 4.5E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 SUPERFAMILY SSF52540 6 237 2.57E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 SUPERFAMILY SSF52540 309 515 2.39E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Gene3D G3DSA:3.40.50.300 315 543 2.2E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Gene3D G3DSA:3.40.50.300 5 279 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Pfam PF12848 ABC transporter 223 303 1.8E-10 T 23-04-2016 IPR032781 ABC-transporter extension domain NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 SMART SM00382 341 532 1.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 SMART SM00382 28 236 5.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS21350 23e7df25e42071212e2e6127caea4574 626 Pfam PF16326 ABC transporter C-terminal domain 557 623 2.9E-17 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 SUPERFAMILY SSF49299 54 116 1.1E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 Pfam PF00801 PKD domain 65 103 7.8E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 SUPERFAMILY SSF49299 133 191 1.44E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 Gene3D G3DSA:2.60.40.670 48 119 9.6E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 Gene3D G3DSA:2.60.40.670 135 193 4.8E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 SMART SM00089 48 118 3.1E-4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS12830 64d826804a39c4853580f1fc75e6ca77 348 SMART SM00089 127 204 1.5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 Gene3D G3DSA:3.40.50.300 1 235 2.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 SUPERFAMILY SSF52540 2 231 1.21E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 SMART SM00382 26 223 1.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 243 5.4E-112 T 23-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 PANTHER PTHR24220 3 251 3.9E-127 T 23-04-2016 NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 PANTHER PTHR24220:SF85 3 251 3.9E-127 T 23-04-2016 NIAKO_RS01075 5b2d3c8ccc07593aefdc1a264029e16e 252 Pfam PF00005 ABC transporter 17 172 8.7E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS10070 77bf364326896c9fd8e82ddc370fb345 151 Gene3D G3DSA:3.10.450.50 21 128 5.3E-7 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS10070 77bf364326896c9fd8e82ddc370fb345 151 SUPERFAMILY SSF54427 17 127 3.56E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS10070 77bf364326896c9fd8e82ddc370fb345 151 Pfam PF14534 Domain of unknown function (DUF4440) 24 135 4.4E-7 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 NIAKO_RS08305 8e458e232e1437722083986ac6482da8 510 SUPERFAMILY SSF102114 178 325 1.83E-7 T 23-04-2016 NIAKO_RS08305 8e458e232e1437722083986ac6482da8 510 Gene3D G3DSA:3.80.30.20 180 343 1.1E-5 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 Pfam PF06969 HemN C-terminal domain 297 360 2.7E-6 T 23-04-2016 IPR010723 HemN, C-terminal NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 332 4.2E-78 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 Pfam PF04055 Radical SAM superfamily 7 171 8.0E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 Gene3D G3DSA:3.80.30.20 4 235 2.3E-36 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 SMART SM00729 1 219 4.4E-49 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 PANTHER PTHR13932 3 373 8.8E-128 T 23-04-2016 NIAKO_RS33720 09c47b0bc353bc62c17af555f09690be 373 SUPERFAMILY SSF102114 3 372 1.11E-107 T 23-04-2016 NIAKO_RS17000 800d57385e76bd5cb3456b8933eeac7e 504 Pfam PF07980 SusD family 274 503 4.2E-37 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS17000 800d57385e76bd5cb3456b8933eeac7e 504 Pfam PF14322 Starch-binding associating with outer membrane 95 234 9.3E-25 T 23-04-2016 NIAKO_RS17000 800d57385e76bd5cb3456b8933eeac7e 504 SUPERFAMILY SSF48452 25 503 6.07E-114 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17000 800d57385e76bd5cb3456b8933eeac7e 504 Gene3D G3DSA:1.25.40.10 216 319 6.5E-41 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17000 800d57385e76bd5cb3456b8933eeac7e 504 Gene3D G3DSA:1.25.40.10 352 444 6.5E-41 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 SUPERFAMILY SSF48208 699 814 2.79E-60 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 SUPERFAMILY SSF48208 325 648 2.79E-60 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 SUPERFAMILY SSF81296 228 322 2.17E-13 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 Pfam PF02927 Cellulase N-terminal ig-like domain 240 316 7.5E-13 T 23-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 Gene3D G3DSA:1.50.10.10 687 814 8.7E-54 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 Gene3D G3DSA:1.50.10.10 326 635 8.7E-54 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 Pfam PF00759 Glycosyl hydrolase family 9 332 761 3.1E-18 T 23-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NIAKO_RS19860 c29e0791905d7880d6882f035a544b1b 815 Gene3D G3DSA:2.60.40.10 233 323 1.5E-14 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS18800 0ca942bd16d2a69125594fa386d653de 165 SUPERFAMILY SSF54427 24 150 6.73E-8 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 SMART SM00850 154 248 1.1E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 Pfam PF00072 Response regulator receiver domain 11 118 1.9E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 SMART SM00448 9 118 5.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 PANTHER PTHR26402 9 121 4.4E-30 T 23-04-2016 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 SUPERFAMILY SSF52172 8 135 4.7E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 Pfam PF04397 LytTr DNA-binding domain 158 243 7.3E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 Gene3D G3DSA:3.40.50.2300 4 130 6.8E-28 T 23-04-2016 NIAKO_RS17065 55b9c6418c2906945e42ec4ee39a272d 250 Gene3D G3DSA:2.40.50.40 145 211 2.0E-15 T 23-04-2016 NIAKO_RS14875 58a3b4cb64fde0e1a5b9bd8b4227e4da 393 Gene3D G3DSA:3.40.50.2000 220 368 2.2E-21 T 23-04-2016 NIAKO_RS14875 58a3b4cb64fde0e1a5b9bd8b4227e4da 393 PANTHER PTHR12526 41 125 1.5E-24 T 23-04-2016 NIAKO_RS14875 58a3b4cb64fde0e1a5b9bd8b4227e4da 393 PANTHER PTHR12526 157 390 1.5E-24 T 23-04-2016 NIAKO_RS14875 58a3b4cb64fde0e1a5b9bd8b4227e4da 393 SUPERFAMILY SSF53756 39 389 1.7E-40 T 23-04-2016 NIAKO_RS14875 58a3b4cb64fde0e1a5b9bd8b4227e4da 393 Pfam PF13692 Glycosyl transferases group 1 220 351 1.8E-19 T 23-04-2016 NIAKO_RS05475 73fef2d0cec8005be6389d7f60f92590 343 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 322 1.3E-38 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS05475 73fef2d0cec8005be6389d7f60f92590 343 Pfam PF11751 Protein of unknown function (DUF3308) 20 322 3.4E-28 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS33540 c2bab46519da9211355308d37f9911d4 200 PANTHER PTHR38567 3 193 3.1E-73 T 23-04-2016 NIAKO_RS33540 c2bab46519da9211355308d37f9911d4 200 Pfam PF14124 Domain of unknown function (DUF4291) 6 183 3.9E-75 T 23-04-2016 IPR025633 Protein of unknown function DUF4291 NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 Gene3D G3DSA:3.40.50.300 252 495 2.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 Gene3D G3DSA:3.40.50.300 2 233 3.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 SUPERFAMILY SSF52540 2 228 7.88E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 PANTHER PTHR24220:SF416 3 384 2.8E-160 T 23-04-2016 NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 SUPERFAMILY SSF52540 242 489 8.09E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 SMART SM00382 26 215 3.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 SMART SM00382 282 478 3.3E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 PANTHER PTHR24220 3 384 2.8E-160 T 23-04-2016 NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 Pfam PF00005 ABC transporter 273 429 2.1E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 Pfam PF00005 ABC transporter 17 167 1.4E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00320 42642ab26e83b93d9cb8b48b9d5633fc 504 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS31335 e4adfceca41f0526cd28f590fdbfec46 741 PANTHER PTHR30509 2 733 1.6E-57 T 23-04-2016 NIAKO_RS31335 e4adfceca41f0526cd28f590fdbfec46 741 Pfam PF12805 FUSC-like inner membrane protein yccS 68 346 2.9E-53 T 23-04-2016 IPR032692 Integral membrane protein YccS, N-terminal NIAKO_RS31335 e4adfceca41f0526cd28f590fdbfec46 741 Pfam PF13515 Fusaric acid resistance protein-like 408 532 1.3E-21 T 23-04-2016 NIAKO_RS31335 e4adfceca41f0526cd28f590fdbfec46 741 PANTHER PTHR30509:SF8 2 733 1.6E-57 T 23-04-2016 NIAKO_RS19150 b258f65442bf1ea510646d50b273201e 360 PANTHER PTHR23028 197 359 9.4E-37 T 23-04-2016 NIAKO_RS19150 b258f65442bf1ea510646d50b273201e 360 PANTHER PTHR23028 14 177 9.4E-37 T 23-04-2016 NIAKO_RS19150 b258f65442bf1ea510646d50b273201e 360 PANTHER PTHR23028:SF53 197 359 9.4E-37 T 23-04-2016 NIAKO_RS19150 b258f65442bf1ea510646d50b273201e 360 PANTHER PTHR23028:SF53 14 177 9.4E-37 T 23-04-2016 NIAKO_RS19150 b258f65442bf1ea510646d50b273201e 360 Pfam PF01757 Acyltransferase family 19 339 7.7E-23 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS19770 fba2a489895fde9e3a313fe5dd3a3338 206 SUPERFAMILY SSF55469 108 201 4.45E-44 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS19770 fba2a489895fde9e3a313fe5dd3a3338 206 SUPERFAMILY SSF55469 12 73 4.45E-44 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS19770 fba2a489895fde9e3a313fe5dd3a3338 206 PANTHER PTHR23026 11 193 1.3E-33 T 23-04-2016 NIAKO_RS19770 fba2a489895fde9e3a313fe5dd3a3338 206 Gene3D G3DSA:3.40.109.10 12 198 2.5E-46 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 NIAKO_RS19770 fba2a489895fde9e3a313fe5dd3a3338 206 Pfam PF00881 Nitroreductase family 17 187 5.3E-39 T 23-04-2016 IPR029479 Nitroreductase NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 Gene3D G3DSA:1.10.1060.10 23 135 1.2E-22 T 23-04-2016 NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 Pfam PF12838 4Fe-4S dicluster domain 73 134 2.2E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 21 171 28.723 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 PANTHER PTHR10849:SF13 20 170 1.1E-50 T 23-04-2016 NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 30 158 1.5E-42 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 SUPERFAMILY SSF54862 47 163 7.95E-25 T 23-04-2016 NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 120 131 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIAKO_RS34800 3fd79c82fb22e951bbe622e0d31a824b 180 PANTHER PTHR10849 20 170 1.1E-50 T 23-04-2016 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 200 274 4.7E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 SUPERFAMILY SSF74653 88 101 3.79E-20 T 23-04-2016 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 SUPERFAMILY SSF74653 174 275 3.79E-20 T 23-04-2016 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 198 274 2.2E-16 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 PANTHER PTHR33446:SF2 75 275 4.9E-20 T 23-04-2016 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 87 97 5.8E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 214 232 5.8E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 193 214 5.8E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 Gene3D G3DSA:3.30.1150.10 181 275 6.6E-11 T 23-04-2016 NIAKO_RS34855 3a9df04ccaa626c04030fcd8920b148e 278 PANTHER PTHR33446 75 275 4.9E-20 T 23-04-2016 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 SUPERFAMILY SSF48208 96 415 7.56E-27 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 PANTHER PTHR31151:SF4 34 329 8.0E-251 T 23-04-2016 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 PANTHER PTHR31151:SF4 347 671 8.0E-251 T 23-04-2016 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 46 585 1.3E-174 T 23-04-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 PANTHER PTHR31151 34 329 8.0E-251 T 23-04-2016 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 PANTHER PTHR31151 347 671 8.0E-251 T 23-04-2016 NIAKO_RS17640 b1401eb9fb502b6d0669b73a53112a00 674 Gene3D G3DSA:1.50.10.10 157 308 8.3E-8 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS05010 9a547ddb48577a8d5ee822f4ee6e6791 180 SUPERFAMILY SSF51182 10 179 5.63E-58 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS05010 9a547ddb48577a8d5ee822f4ee6e6791 180 PANTHER PTHR33387 5 180 2.4E-61 T 23-04-2016 NIAKO_RS05010 9a547ddb48577a8d5ee822f4ee6e6791 180 Pfam PF06172 Cupin superfamily (DUF985) 20 158 6.8E-43 T 23-04-2016 IPR009327 Cupin domain of unknown function DUF985 NIAKO_RS05010 9a547ddb48577a8d5ee822f4ee6e6791 180 PANTHER PTHR33387:SF3 5 180 2.4E-61 T 23-04-2016 NIAKO_RS05010 9a547ddb48577a8d5ee822f4ee6e6791 180 Gene3D G3DSA:2.60.120.10 4 179 7.4E-61 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS13635 707f56f1775a67f02c66e98b48f8a0c1 348 PANTHER PTHR30273 1 346 1.3E-63 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13635 707f56f1775a67f02c66e98b48f8a0c1 348 Pfam PF04773 FecR protein 142 228 5.1E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS13635 707f56f1775a67f02c66e98b48f8a0c1 348 Pfam PF16344 Domain of unknown function (DUF4974) 240 339 1.4E-20 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS13635 707f56f1775a67f02c66e98b48f8a0c1 348 PIRSF PIRSF018266 1 344 2.5E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13635 707f56f1775a67f02c66e98b48f8a0c1 348 PANTHER PTHR30273:SF2 1 346 1.3E-63 T 23-04-2016 NIAKO_RS31150 1b02d948a7c7e0ba81e76f234c736af2 875 SUPERFAMILY SSF48208 417 613 4.08E-45 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS31150 1b02d948a7c7e0ba81e76f234c736af2 875 SUPERFAMILY SSF48208 663 866 4.08E-45 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS31150 1b02d948a7c7e0ba81e76f234c736af2 875 PANTHER PTHR10412:SF10 2 866 0.0 T 23-04-2016 NIAKO_RS31150 1b02d948a7c7e0ba81e76f234c736af2 875 PANTHER PTHR10412 2 866 0.0 T 23-04-2016 IPR004888 Glycoside hydrolase family 63 GO:0004573|GO:0009311 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 SMART SM00358 171 237 2.9E-11 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 ProSitePatterns PS00517 Ribonuclease III family signature. 55 63 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 SUPERFAMILY SSF69065 21 154 1.13E-35 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 Pfam PF00035 Double-stranded RNA binding motif 172 236 1.1E-10 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 233 22.595 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 SUPERFAMILY SSF54768 124 241 4.09E-15 T 23-04-2016 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 Pfam PF14622 Ribonuclease-III-like 36 154 1.0E-28 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 Gene3D G3DSA:1.10.1520.10 22 154 7.3E-35 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 Gene3D G3DSA:3.30.160.20 169 236 9.2E-12 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 SMART SM00535 35 164 1.6E-34 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NIAKO_RS27775 accc7c5ebdea37ae1203a0481305fd37 247 PANTHER PTHR11207 27 247 2.5E-45 T 23-04-2016 NIAKO_RS11380 dad77d992c8b9a9b336beaea9047503b 269 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 NIAKO_RS11380 dad77d992c8b9a9b336beaea9047503b 269 PANTHER PTHR13773 1 267 8.6E-49 T 23-04-2016 NIAKO_RS11380 dad77d992c8b9a9b336beaea9047503b 269 Pfam PF01148 Cytidylyltransferase family 6 267 1.8E-51 T 23-04-2016 NIAKO_RS11380 dad77d992c8b9a9b336beaea9047503b 269 PANTHER PTHR13773:SF0 1 267 8.6E-49 T 23-04-2016 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 SUPERFAMILY SSF48452 30 287 8.72E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 PANTHER PTHR23083 417 532 2.0E-24 T 23-04-2016 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 PANTHER PTHR23083 32 306 2.0E-24 T 23-04-2016 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 Pfam PF13181 Tetratricopeptide repeat 193 225 0.062 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 Gene3D G3DSA:1.25.40.10 269 532 1.8E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 Gene3D G3DSA:1.25.40.10 25 259 3.7E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 SMART SM00028 193 226 0.025 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 SMART SM00028 488 522 59.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 SMART SM00028 159 192 8.4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS35605 c3c9db4dc2530290a2b94b70b6d873d7 549 SUPERFAMILY SSF48452 407 535 1.19E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 Pfam PF05506 Domain of unknown function (DUF756) 636 733 9.8E-18 T 23-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 PANTHER PTHR31956:SF6 2 299 1.3E-102 T 23-04-2016 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 PANTHER PTHR31956:SF6 390 570 1.3E-102 T 23-04-2016 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 Pfam PF04185 Phosphoesterase family 379 540 5.6E-43 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 Pfam PF04185 Phosphoesterase family 46 279 1.9E-47 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 844 2.1E-235 T 23-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 PANTHER PTHR31956 2 299 1.3E-102 T 23-04-2016 NIAKO_RS05465 53c4a227bf96a5cc27ab62731f0df066 847 PANTHER PTHR31956 390 570 1.3E-102 T 23-04-2016 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 Gene3D G3DSA:1.10.150.20 221 259 8.7E-8 T 23-04-2016 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 Gene3D G3DSA:3.40.50.10140 3 112 7.8E-7 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 Pfam PF13676 TIR domain 3 111 7.9E-12 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 224 261 2.8E-6 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 SUPERFAMILY SSF47789 223 260 1.57E-6 T 23-04-2016 NIAKO_RS23455 331c6b29ed7aa2ef78ceb51d27b3512d 282 SUPERFAMILY SSF52200 2 110 1.12E-9 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 Pfam PF16323 Domain of unknown function (DUF4959) 18 123 2.1E-37 T 23-04-2016 IPR032527 Domain of unknown function DUF4959 NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 SUPERFAMILY SSF49785 250 328 2.67E-13 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 SUPERFAMILY SSF49785 359 406 2.67E-13 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 Gene3D G3DSA:2.60.120.260 252 406 6.5E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 Pfam PF17166 Domain of unknown function (DUF5126) 124 230 4.8E-31 T 23-04-2016 IPR033431 Domain of unknown function DUF5126 NIAKO_RS18825 f096a1121309348cd2fc5e92ff9507ff 407 Pfam PF16391 Domain of unknown function 256 406 2.3E-46 T 23-04-2016 IPR032164 Domain of unknown function DUF5000 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 210 223 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 Gene3D G3DSA:3.40.640.10 42 232 6.2E-52 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 Gene3D G3DSA:3.90.1150.10 233 345 2.6E-13 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 Pfam PF00155 Aminotransferase class I and II 47 344 7.5E-45 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 PANTHER PTHR11751:SF301 47 346 5.6E-61 T 23-04-2016 NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 SUPERFAMILY SSF53383 45 346 6.05E-69 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS29080 93c73fb9c169c2f9a7c9bc0f48fd73b3 346 PANTHER PTHR11751 47 346 5.6E-61 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 Gene3D G3DSA:2.140.10.30 22 216 4.6E-43 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 Gene3D G3DSA:2.140.10.30 252 527 4.6E-43 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 Gene3D G3DSA:3.40.50.1820 556 809 4.5E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 Pfam PF00326 Prolyl oligopeptidase family 614 809 3.5E-43 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 SUPERFAMILY SSF53474 556 809 2.03E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 SUPERFAMILY SSF82171 237 321 8.89E-37 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 SUPERFAMILY SSF82171 22 159 8.89E-37 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 SUPERFAMILY SSF82171 351 527 8.89E-37 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 PANTHER PTHR11731 99 153 6.5E-126 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 PANTHER PTHR11731 243 809 6.5E-126 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 PANTHER PTHR11731:SF145 99 153 6.5E-126 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 PANTHER PTHR11731:SF145 243 809 6.5E-126 T 23-04-2016 NIAKO_RS01650 70f90ebd0ffd29db88bed48c22a4bad3 810 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 352 520 6.7E-19 T 23-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 Gene3D G3DSA:2.60.40.1180 419 472 4.2E-17 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 82 421 6.7E-78 T 23-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 424 484 5.5E-16 T 23-04-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 PRINTS PR00843 Glycosyl hydrolase family 30 signature 108 134 7.13E-20 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 PRINTS PR00843 Glycosyl hydrolase family 30 signature 202 219 7.13E-20 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 PRINTS PR00843 Glycosyl hydrolase family 30 signature 271 293 7.13E-20 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 PRINTS PR00843 Glycosyl hydrolase family 30 signature 72 92 7.13E-20 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 Gene3D G3DSA:3.20.20.80 66 418 7.1E-137 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 SUPERFAMILY SSF51445 82 425 1.58E-84 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30365 a1254dcb1a5293ab6d7f32fde4052bf5 487 PANTHER PTHR11069 32 487 5.6E-159 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 PANTHER PTHR11532 1 358 1.9E-261 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 PANTHER PTHR11532 487 1043 1.9E-261 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 231 2.4E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.170.130.10 118 234 4.9E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 26 1045 1.7E-257 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF49464 26 97 2.22E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 886 911 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 235 251 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 442 794 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 950 1045 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 311 388 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.40.170.20 842 843 1.9E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Pfam PF13715 CarboxypepD_reg-like domain 27 110 1.7E-17 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 Gene3D G3DSA:2.60.40.1120 27 96 1.1E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 PANTHER PTHR11532:SF57 1 358 1.9E-261 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 PANTHER PTHR11532:SF57 487 1043 1.9E-261 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF56935 957 1045 4.58E-90 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF56935 447 794 4.58E-90 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF56935 106 255 4.58E-90 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF56935 878 921 4.58E-90 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 SUPERFAMILY SSF56935 302 392 4.58E-90 T 23-04-2016 NIAKO_RS30380 958a9b5a070fcd6ed7fb281e017342cf 1045 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 207 237 3.8E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS15475 caaa3730188de74189dfd8ae9459be69 255 SMART SM00342 158 242 0.0077 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15475 caaa3730188de74189dfd8ae9459be69 255 Pfam PF12833 Helix-turn-helix domain 166 241 5.4E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS15475 caaa3730188de74189dfd8ae9459be69 255 Gene3D G3DSA:1.10.10.60 220 241 5.4E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07330 1a5dec46ceeb26fc5816a09aede49629 167 Pfam PF01152 Bacterial-like globin 15 114 1.9E-12 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 NIAKO_RS07330 1a5dec46ceeb26fc5816a09aede49629 167 Gene3D G3DSA:1.10.490.10 14 129 6.2E-25 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NIAKO_RS07330 1a5dec46ceeb26fc5816a09aede49629 167 SUPERFAMILY SSF46458 15 128 1.95E-20 T 23-04-2016 IPR009050 Globin-like NIAKO_RS25115 28ff624897de60565aa92358f6b39e2d 271 Pfam PF13525 Outer membrane lipoprotein 36 220 1.7E-18 T 23-04-2016 NIAKO_RS25115 28ff624897de60565aa92358f6b39e2d 271 Gene3D G3DSA:1.25.40.10 32 102 7.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25115 28ff624897de60565aa92358f6b39e2d 271 Gene3D G3DSA:1.25.40.10 165 202 7.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25115 28ff624897de60565aa92358f6b39e2d 271 SUPERFAMILY SSF48452 24 102 2.11E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25115 28ff624897de60565aa92358f6b39e2d 271 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 215 3.0E-31 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD NIAKO_RS22660 9e8e45abb78d69b8cc9cdb54d49598a3 490 SUPERFAMILY SSF52833 364 489 1.69E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22660 9e8e45abb78d69b8cc9cdb54d49598a3 490 Gene3D G3DSA:3.40.30.10 366 490 4.6E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS22660 9e8e45abb78d69b8cc9cdb54d49598a3 490 Pfam PF13905 Thioredoxin-like 372 467 1.8E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS27685 92630dda1ec20200a36e45c2e96b1ede 213 PANTHER PTHR10587 23 208 1.5E-35 T 23-04-2016 NIAKO_RS27685 92630dda1ec20200a36e45c2e96b1ede 213 Gene3D G3DSA:3.20.20.370 11 211 1.0E-45 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS27685 92630dda1ec20200a36e45c2e96b1ede 213 Pfam PF01522 Polysaccharide deacetylase 24 124 3.4E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS27685 92630dda1ec20200a36e45c2e96b1ede 213 SUPERFAMILY SSF88713 10 209 6.67E-47 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS27685 92630dda1ec20200a36e45c2e96b1ede 213 PANTHER PTHR10587:SF70 23 208 1.5E-35 T 23-04-2016 NIAKO_RS09805 cb32700bf0b8321754bd44cd0818c8e3 448 Pfam PF14135 Domain of unknown function (DUF4302) 24 268 2.5E-57 T 23-04-2016 IPR025396 Protein of unknown function DUF4302 NIAKO_RS02180 12ba0073b4823123a9a195ae779e16fb 267 PANTHER PTHR33643:SF1 5 197 7.2E-28 T 23-04-2016 NIAKO_RS02180 12ba0073b4823123a9a195ae779e16fb 267 Pfam PF01774 UreD urease accessory protein 44 244 3.8E-37 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 NIAKO_RS02180 12ba0073b4823123a9a195ae779e16fb 267 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 256 19.511 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 NIAKO_RS02180 12ba0073b4823123a9a195ae779e16fb 267 PANTHER PTHR33643 5 197 7.2E-28 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Gene3D G3DSA:2.40.170.20 367 834 3.1E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Gene3D G3DSA:2.40.170.20 939 1046 3.1E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF56935 359 447 2.23E-65 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF56935 485 834 2.23E-65 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF56935 911 955 2.23E-65 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF56935 993 1055 2.23E-65 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF56935 178 300 2.23E-65 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 SUPERFAMILY SSF49464 67 137 1.57E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Pfam PF13715 CarboxypepD_reg-like domain 68 134 1.0E-8 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532:SF57 561 591 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532:SF57 433 482 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532:SF57 68 413 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532:SF57 619 1080 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532 561 591 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532 433 482 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532 68 413 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 PANTHER PTHR11532 619 1080 2.2E-159 T 23-04-2016 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 67 1081 6.9E-192 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Gene3D G3DSA:2.60.40.1120 68 136 1.6E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Gene3D G3DSA:2.170.130.10 177 285 3.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03565 2a19343ad18544878af2684993461c86 1082 Pfam PF07715 TonB-dependent Receptor Plug Domain 177 276 1.1E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 Gene3D G3DSA:3.30.910.20 11 57 2.2E-20 T 23-04-2016 NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 Gene3D G3DSA:3.30.910.20 98 169 2.2E-20 T 23-04-2016 NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 Pfam PF03938 Outer membrane protein (OmpH-like) 8 168 4.3E-34 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 PANTHER PTHR35089 2 169 9.8E-31 T 23-04-2016 NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 SUPERFAMILY SSF111384 20 168 1.18E-23 T 23-04-2016 IPR024930 Skp domain NIAKO_RS32450 7fc937d358daee80fd9590e825c3a46a 171 SMART SM00935 11 169 2.9E-37 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 SUPERFAMILY SSF88659 105 177 4.58E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 174 5.4E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 Gene3D G3DSA:1.10.1740.10 21 114 2.1E-19 T 23-04-2016 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 PANTHER PTHR30173 2 188 7.5E-37 T 23-04-2016 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 176 2.1E-42 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 Gene3D G3DSA:1.10.10.10 116 176 4.7E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 SUPERFAMILY SSF88946 20 97 1.65E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 PANTHER PTHR30173:SF20 2 188 7.5E-37 T 23-04-2016 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 Pfam PF08281 Sigma-70, region 4 121 171 1.2E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS32495 86e22b80323501c223b70afaa15c19ef 188 Pfam PF04542 Sigma-70 region 2 24 89 5.2E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03755 e07f5a24209af32f5f433891ccec5b45 182 Gene3D G3DSA:2.60.120.10 1 153 1.2E-33 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS03755 e07f5a24209af32f5f433891ccec5b45 182 SUPERFAMILY SSF51206 14 139 8.9E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS03755 e07f5a24209af32f5f433891ccec5b45 182 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 37 53 - T 23-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site NIAKO_RS03755 e07f5a24209af32f5f433891ccec5b45 182 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 2.7E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 PANTHER PTHR12903 8 111 6.6E-33 T 23-04-2016 NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 10 111 1.9E-28 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 Gene3D G3DSA:2.30.30.30 6 98 9.6E-22 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 SUPERFAMILY SSF50104 7 109 2.63E-30 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 48 111 3.0E-23 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22945 8e6e7ccac98787d97b9694e14913b4f6 112 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 9 105 19.646 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 PANTHER PTHR11441 1 191 6.0E-81 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 SUPERFAMILY SSF52540 12 146 1.42E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 Pfam PF00265 Thymidine kinase 13 185 7.6E-55 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 PIRSF PIRSF035805 10 193 3.0E-63 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 Hamap MF_00124 Thymidine kinase [tdk]. 12 188 31.064 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 Gene3D G3DSA:3.30.60.20 146 187 1.4E-16 T 23-04-2016 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 172 185 - T 23-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 NIAKO_RS24710 ae1e07344eceb4973fb3001e254075f9 193 SUPERFAMILY SSF57716 146 190 2.71E-12 T 23-04-2016 NIAKO_RS08015 71b455f94d298c23b10114cd10e054af 250 SUPERFAMILY SSF53448 6 236 1.69E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS08015 71b455f94d298c23b10114cd10e054af 250 PANTHER PTHR10859 6 245 2.0E-83 T 23-04-2016 NIAKO_RS08015 71b455f94d298c23b10114cd10e054af 250 Gene3D G3DSA:3.90.550.10 6 198 8.4E-16 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS08015 71b455f94d298c23b10114cd10e054af 250 Pfam PF00535 Glycosyl transferase family 2 9 168 2.0E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS08015 71b455f94d298c23b10114cd10e054af 250 PANTHER PTHR10859:SF94 6 245 2.0E-83 T 23-04-2016 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 36 53 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PIRSF PIRSF000097 3 298 3.0E-93 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PANTHER PTHR11732 131 286 1.8E-126 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PANTHER PTHR11732 1 110 1.8E-126 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 Pfam PF00248 Aldo/keto reductase family 21 279 1.4E-48 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 Gene3D G3DSA:3.20.20.100 8 286 1.9E-97 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 SUPERFAMILY SSF51430 8 288 1.83E-83 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PRINTS PR00069 Aldo-keto reductase signature 217 241 3.2E-45 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PRINTS PR00069 Aldo-keto reductase signature 32 56 3.2E-45 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.2E-45 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PRINTS PR00069 Aldo-keto reductase signature 92 110 3.2E-45 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS12135 07c3d7d9c0012d3e5abcfeb0389dd16d 300 PRINTS PR00069 Aldo-keto reductase signature 177 206 3.2E-45 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 20 126 22.519 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 Pfam PF02410 Ribosomal silencing factor during starvation 28 125 3.2E-27 T 23-04-2016 NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 Gene3D G3DSA:3.30.460.10 23 128 2.1E-33 T 23-04-2016 NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 SUPERFAMILY SSF81301 24 130 2.29E-32 T 23-04-2016 NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 27 125 1.3E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NIAKO_RS28400 b7a8ee9667e6172fc80d7862d59de6c3 133 PANTHER PTHR21043 28 128 1.4E-31 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NIAKO_RS07515 f2004068c277c3e362605c9eb4baad38 186 SUPERFAMILY SSF55811 7 179 3.79E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS07515 f2004068c277c3e362605c9eb4baad38 186 Pfam PF00293 NUDIX domain 47 155 3.8E-8 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS07515 f2004068c277c3e362605c9eb4baad38 186 Gene3D G3DSA:3.90.79.10 7 179 1.5E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS07515 f2004068c277c3e362605c9eb4baad38 186 PANTHER PTHR11839 8 180 2.5E-29 T 23-04-2016 NIAKO_RS07515 f2004068c277c3e362605c9eb4baad38 186 PANTHER PTHR11839:SF9 8 180 2.5E-29 T 23-04-2016 NIAKO_RS08270 53b804e6b9b69bcf7a724b5d43e8338a 91 PANTHER PTHR30572:SF4 34 91 8.0E-16 T 23-04-2016 NIAKO_RS08270 53b804e6b9b69bcf7a724b5d43e8338a 91 PANTHER PTHR30572 34 91 8.0E-16 T 23-04-2016 NIAKO_RS05785 0263a3972639391796fffe85b35298d4 618 Gene3D G3DSA:3.30.2010.10 181 222 3.1E-4 T 23-04-2016 NIAKO_RS05785 0263a3972639391796fffe85b35298d4 618 Pfam PF05569 BlaR1 peptidase M56 108 299 1.9E-33 T 23-04-2016 IPR008756 Peptidase M56 NIAKO_RS05785 0263a3972639391796fffe85b35298d4 618 PANTHER PTHR34978 85 325 2.4E-32 T 23-04-2016 NIAKO_RS05785 0263a3972639391796fffe85b35298d4 618 PANTHER PTHR34978:SF2 85 325 2.4E-32 T 23-04-2016 NIAKO_RS24500 2f11151a437c90ade1764c523052b56e 683 SUPERFAMILY SSF48208 98 360 9.86E-12 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS24500 2f11151a437c90ade1764c523052b56e 683 PANTHER PTHR31151:SF4 48 683 2.4E-172 T 23-04-2016 NIAKO_RS24500 2f11151a437c90ade1764c523052b56e 683 PANTHER PTHR31151 48 683 2.4E-172 T 23-04-2016 NIAKO_RS24500 2f11151a437c90ade1764c523052b56e 683 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 99 549 2.0E-90 T 23-04-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS13295 cfc96f10a11c3599040fcae6062497e3 461 Pfam PF14322 Starch-binding associating with outer membrane 6 222 1.3E-26 T 23-04-2016 NIAKO_RS13295 cfc96f10a11c3599040fcae6062497e3 461 SUPERFAMILY SSF48452 2 461 2.28E-72 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13295 cfc96f10a11c3599040fcae6062497e3 461 Pfam PF07980 SusD family 317 421 3.4E-24 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13295 cfc96f10a11c3599040fcae6062497e3 461 Gene3D G3DSA:1.25.40.10 205 406 1.0E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31085 cfc7e309d2f6b48227a84519ae6e1428 508 PANTHER PTHR31901 1 455 4.5E-30 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS31085 cfc7e309d2f6b48227a84519ae6e1428 508 Pfam PF03321 GH3 auxin-responsive promoter 163 492 1.1E-44 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS31085 cfc7e309d2f6b48227a84519ae6e1428 508 PANTHER PTHR31901:SF5 1 455 4.5E-30 T 23-04-2016 NIAKO_RS03130 d23a247c19cc24bd712bb5de8267fcde 344 PANTHER PTHR34220 11 341 1.3E-49 T 23-04-2016 NIAKO_RS03130 d23a247c19cc24bd712bb5de8267fcde 344 SUPERFAMILY SSF55874 206 321 8.28E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS03130 d23a247c19cc24bd712bb5de8267fcde 344 Pfam PF06580 Histidine kinase 156 234 2.9E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS03130 d23a247c19cc24bd712bb5de8267fcde 344 PANTHER PTHR34220:SF1 11 341 1.3E-49 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Gene3D G3DSA:2.40.170.20 843 992 1.5E-60 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Gene3D G3DSA:2.40.170.20 235 254 1.5E-60 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Gene3D G3DSA:2.40.170.20 308 780 1.5E-60 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 SUPERFAMILY SSF56935 834 991 6.96E-88 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 SUPERFAMILY SSF56935 416 764 6.96E-88 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 SUPERFAMILY SSF56935 299 388 6.96E-88 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 SUPERFAMILY SSF56935 117 258 6.96E-88 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Pfam PF07715 TonB-dependent Receptor Plug Domain 127 234 5.7E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 36 992 5.2E-217 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 SUPERFAMILY SSF49464 36 117 2.49E-17 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Gene3D G3DSA:2.170.130.10 124 234 3.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 210 240 5.5E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Gene3D G3DSA:2.60.40.1120 37 123 6.2E-14 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532:SF57 16 413 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532:SF57 791 990 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532:SF57 487 525 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532:SF57 551 772 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 Pfam PF13715 CarboxypepD_reg-like domain 38 119 1.5E-15 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532 16 413 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532 791 990 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532 487 525 1.7E-213 T 23-04-2016 NIAKO_RS03745 70c7a7dc7785d8fb41ce4a92cd37b6a3 992 PANTHER PTHR11532 551 772 1.7E-213 T 23-04-2016 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 Gene3D G3DSA:2.60.120.330 2 310 5.9E-92 T 23-04-2016 IPR027443 Isopenicillin N synthase-like NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PANTHER PTHR10209 1 309 2.8E-89 T 23-04-2016 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 3 114 3.5E-29 T 23-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 170 273 4.5E-17 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PANTHER PTHR10209:SF68 1 309 2.8E-89 T 23-04-2016 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 SUPERFAMILY SSF51197 2 310 4.05E-87 T 23-04-2016 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PRINTS PR00682 Isopenicillin N synthase signature 229 255 6.9E-11 T 23-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PRINTS PR00682 Isopenicillin N synthase signature 26 43 6.9E-11 T 23-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PRINTS PR00682 Isopenicillin N synthase signature 298 314 6.9E-11 T 23-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 NIAKO_RS31590 8054bacaec6d4eb80abcf8be2f3af75c 314 PRINTS PR00682 Isopenicillin N synthase signature 193 214 6.9E-11 T 23-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 6.4E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 Gene3D G3DSA:3.40.50.720 3 255 1.3E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PANTHER PTHR24322 161 195 1.0E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PANTHER PTHR24322 11 145 1.0E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 7.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.4E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 3.9E-54 T 23-04-2016 NIAKO_RS02640 4202696505cef0eea0ea5fbc8e8362e5 256 SUPERFAMILY SSF51735 5 256 2.51E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36560 58738b06132ccf405663e0c7a74a411f 147 Gene3D G3DSA:3.40.50.2300 11 141 2.3E-27 T 23-04-2016 NIAKO_RS36560 58738b06132ccf405663e0c7a74a411f 147 SUPERFAMILY SSF52172 14 144 1.39E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36560 58738b06132ccf405663e0c7a74a411f 147 PANTHER PTHR26402 15 110 7.8E-19 T 23-04-2016 NIAKO_RS36560 58738b06132ccf405663e0c7a74a411f 147 SMART SM00448 16 135 1.1E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36560 58738b06132ccf405663e0c7a74a411f 147 Pfam PF00072 Response regulator receiver domain 18 135 8.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 PANTHER PTHR22935 31 445 1.0E-85 T 23-04-2016 NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 Pfam PF00144 Beta-lactamase 32 371 2.2E-67 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 Pfam PF11954 Domain of unknown function (DUF3471) 408 499 1.0E-15 T 23-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 Gene3D G3DSA:3.40.710.10 21 373 5.2E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 SUPERFAMILY SSF56601 29 358 1.38E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31800 4724fea870510868d98394884a702eb7 506 PANTHER PTHR22935:SF68 31 445 1.0E-85 T 23-04-2016 NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 PANTHER PTHR24220:SF530 3 214 2.9E-50 T 23-04-2016 NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 Pfam PF00005 ABC transporter 19 156 1.2E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 Gene3D G3DSA:3.40.50.300 1 212 9.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 SMART SM00382 27 204 1.5E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 SUPERFAMILY SSF52540 2 212 6.35E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS23920 9a7951d288e1f6471a0de4b96f84455a 278 PANTHER PTHR24220 3 214 2.9E-50 T 23-04-2016 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 Gene3D G3DSA:1.25.40.10 189 266 1.7E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 Gene3D G3DSA:1.25.40.10 54 169 5.0E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 SMART SM00028 220 253 0.55 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 SMART SM00028 186 219 77.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 SUPERFAMILY SSF81901 40 101 4.45E-14 T 23-04-2016 NIAKO_RS36945 7ff1f0a09dd242a7b4dec8760583465a 281 SUPERFAMILY SSF81901 141 249 4.45E-14 T 23-04-2016 NIAKO_RS25275 2f0bc4bb6285771c365b6a46c9a7a228 196 Pfam PF04011 LemA family 8 196 2.3E-73 T 23-04-2016 IPR007156 LemA NIAKO_RS25275 2f0bc4bb6285771c365b6a46c9a7a228 196 PANTHER PTHR34478 1 196 2.0E-78 T 23-04-2016 NIAKO_RS25275 2f0bc4bb6285771c365b6a46c9a7a228 196 SUPERFAMILY SSF140478 29 185 7.32E-54 T 23-04-2016 IPR023353 LemA-like domain NIAKO_RS25275 2f0bc4bb6285771c365b6a46c9a7a228 196 PANTHER PTHR34478:SF2 1 196 2.0E-78 T 23-04-2016 NIAKO_RS25275 2f0bc4bb6285771c365b6a46c9a7a228 196 Gene3D G3DSA:1.20.1440.20 18 196 1.3E-64 T 23-04-2016 IPR023353 LemA-like domain NIAKO_RS30060 a482a6fa3bf65ddc30fe9e4dc9a74566 505 Pfam PF07980 SusD family 283 476 1.2E-22 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS30060 a482a6fa3bf65ddc30fe9e4dc9a74566 505 Pfam PF14322 Starch-binding associating with outer membrane 109 224 2.1E-11 T 23-04-2016 NIAKO_RS30060 a482a6fa3bf65ddc30fe9e4dc9a74566 505 SUPERFAMILY SSF48452 17 505 4.43E-80 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30060 a482a6fa3bf65ddc30fe9e4dc9a74566 505 Gene3D G3DSA:1.25.40.10 216 335 3.1E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30060 a482a6fa3bf65ddc30fe9e4dc9a74566 505 Gene3D G3DSA:1.25.40.10 381 459 3.1E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 SUPERFAMILY SSF52540 155 325 1.68E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 SUPERFAMILY SSF52540 39 117 1.68E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 Pfam PF00158 Sigma-54 interaction domain 163 227 8.4E-5 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 PANTHER PTHR30267 1 383 2.1E-134 T 23-04-2016 NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 PANTHER PTHR30267:SF3 1 383 2.1E-134 T 23-04-2016 NIAKO_RS14360 6574abe568ea2d0465f1bfd8a8a59869 506 Gene3D G3DSA:3.40.50.300 39 245 1.6E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 PANTHER PTHR38478 5 835 2.1E-136 T 23-04-2016 NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 Pfam PF17162 Domain of unknown function (DUF5118) 56 103 3.8E-19 T 23-04-2016 IPR033428 Domain of unknown function DUF5118 NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 SUPERFAMILY SSF55486 319 541 1.34E-20 T 23-04-2016 NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 Gene3D G3DSA:3.40.390.10 304 540 1.1E-11 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 Pfam PF17148 Domain of unknown function (DUF5117) 120 312 7.5E-62 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS20410 b5390766488e3b74687b1a102596b1e7 843 Pfam PF16313 Met-zincin 447 761 2.3E-124 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 88 307 2.5E-29 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 PANTHER PTHR30160 1 301 1.7E-36 T 23-04-2016 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 SUPERFAMILY SSF53756 10 326 1.73E-61 T 23-04-2016 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 Gene3D G3DSA:3.40.50.2000 10 157 1.7E-17 T 23-04-2016 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 PANTHER PTHR30160:SF1 1 301 1.7E-36 T 23-04-2016 NIAKO_RS10975 0ccb92b3aa2db97c72c816a9f2ab495a 351 Gene3D G3DSA:3.40.50.2000 183 309 4.3E-36 T 23-04-2016 NIAKO_RS24845 c13a02ed6e0665cd448b1b945b8f37f3 1305 Pfam PF01963 TraB family 53 325 1.5E-38 T 23-04-2016 IPR002816 Pheromone shutdown, TraB NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532 1 176 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532 409 461 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532 553 976 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532 486 516 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532 195 351 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.60.40.1120 13 97 2.4E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Pfam PF13715 CarboxypepD_reg-like domain 13 94 4.0E-16 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 12 978 3.8E-195 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 1.6E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 228 5.6E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF56935 412 761 1.14E-85 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF56935 812 859 1.14E-85 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF56935 289 378 1.14E-85 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF56935 91 252 1.14E-85 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF56935 886 977 1.14E-85 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 SUPERFAMILY SSF49464 13 105 5.36E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.170.130.10 98 229 1.9E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.40.170.20 298 361 9.5E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.40.170.20 824 977 9.5E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.40.170.20 230 256 9.5E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 Gene3D G3DSA:2.40.170.20 393 782 9.5E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532:SF57 1 176 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532:SF57 409 461 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532:SF57 553 976 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532:SF57 486 516 3.9E-172 T 23-04-2016 NIAKO_RS29755 f9b57d20a43a8ce30a82191d1fc80fa8 978 PANTHER PTHR11532:SF57 195 351 3.9E-172 T 23-04-2016 NIAKO_RS10805 82458192e61c609e08d669de4aa4ff03 148 Pfam PF00583 Acetyltransferase (GNAT) family 55 132 2.4E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS10805 82458192e61c609e08d669de4aa4ff03 148 SUPERFAMILY SSF55729 2 142 7.48E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS10805 82458192e61c609e08d669de4aa4ff03 148 PANTHER PTHR10545 1 135 6.9E-46 T 23-04-2016 NIAKO_RS10805 82458192e61c609e08d669de4aa4ff03 148 Gene3D G3DSA:3.40.630.30 1 138 9.4E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS17405 66ab5d1be5f040750173a3871ab267d5 237 Gene3D G3DSA:3.40.50.150 28 235 3.1E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17405 66ab5d1be5f040750173a3871ab267d5 237 PANTHER PTHR10108 170 195 2.6E-12 T 23-04-2016 NIAKO_RS17405 66ab5d1be5f040750173a3871ab267d5 237 PANTHER PTHR10108 6 153 2.6E-12 T 23-04-2016 NIAKO_RS17405 66ab5d1be5f040750173a3871ab267d5 237 SUPERFAMILY SSF53335 24 234 3.56E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17405 66ab5d1be5f040750173a3871ab267d5 237 Pfam PF13489 Methyltransferase domain 31 185 7.5E-21 T 23-04-2016 NIAKO_RS11280 47d858d87596b2d7bf8e515fe7ad1194 158 Gene3D G3DSA:2.30.110.10 3 150 4.2E-33 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS11280 47d858d87596b2d7bf8e515fe7ad1194 158 PANTHER PTHR34071 6 145 5.7E-13 T 23-04-2016 NIAKO_RS11280 47d858d87596b2d7bf8e515fe7ad1194 158 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 6 107 1.2E-18 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related NIAKO_RS11280 47d858d87596b2d7bf8e515fe7ad1194 158 SUPERFAMILY SSF50475 5 145 2.78E-26 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 Gene3D G3DSA:1.10.10.60 205 250 3.1E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 Gene3D G3DSA:1.10.10.60 153 204 8.3E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 PANTHER PTHR11019 132 248 6.2E-19 T 23-04-2016 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 PANTHER PTHR11019:SF126 132 248 6.2E-19 T 23-04-2016 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 SMART SM00342 167 249 2.2E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 SUPERFAMILY SSF46689 207 249 3.54E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05505 700df636aaeb2569d862048635fc941f 255 Pfam PF12833 Helix-turn-helix domain 175 250 1.1E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS10875 609aef0925b5264dd70de84e3caac9b5 165 SUPERFAMILY SSF53271 4 152 1.8E-20 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS10875 609aef0925b5264dd70de84e3caac9b5 165 Gene3D G3DSA:3.40.50.2020 4 154 1.9E-22 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS10875 609aef0925b5264dd70de84e3caac9b5 165 Pfam PF00156 Phosphoribosyl transferase domain 6 146 1.7E-13 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS10875 609aef0925b5264dd70de84e3caac9b5 165 PANTHER PTHR11608 1 155 2.6E-20 T 23-04-2016 NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 PANTHER PTHR30273 195 410 1.9E-66 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 PANTHER PTHR30273 1 126 1.9E-66 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 Pfam PF16344 Domain of unknown function (DUF4974) 306 407 1.8E-21 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 Pfam PF04773 FecR protein 200 294 4.1E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 PANTHER PTHR30273:SF2 195 410 1.9E-66 T 23-04-2016 NIAKO_RS23395 5b8bb08373c614317b2edd3edb7c22b8 410 PANTHER PTHR30273:SF2 1 126 1.9E-66 T 23-04-2016 NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 Pfam PF00772 DnaB-like helicase N terminal domain 30 130 7.6E-32 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 Gene3D G3DSA:1.10.860.10 30 132 1.7E-33 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 Pfam PF03796 DnaB-like helicase C terminal domain 205 470 1.3E-103 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 Gene3D G3DSA:3.40.50.300 190 473 8.9E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 SMART SM00382 222 426 0.002 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 PANTHER PTHR30153 14 481 4.6E-179 T 23-04-2016 NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 30 472 4.8E-159 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 SUPERFAMILY SSF52540 203 460 1.43E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27515 06268f72e1581979560cd56f80da9c53 529 SUPERFAMILY SSF48024 28 139 2.09E-32 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 SMART SM00418 4 82 1.7E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 Gene3D G3DSA:1.10.10.10 4 102 3.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 Pfam PF12840 Helix-turn-helix domain 4 61 5.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 PANTHER PTHR33154 1 94 4.5E-16 T 23-04-2016 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 6 21 4.1E-5 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 4.1E-5 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 PANTHER PTHR33154:SF6 1 94 4.5E-16 T 23-04-2016 NIAKO_RS29110 692428cab81eafe567001cb4636df1a4 112 SUPERFAMILY SSF46785 4 94 6.39E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS17350 470b6be1999b0a0dcaf04c6aa9bba098 352 Pfam PF14100 Methane oxygenase PmoA 36 338 3.5E-76 T 23-04-2016 IPR029475 Methane oxygenase PmoA NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 149 40.877 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 Gene3D G3DSA:3.40.140.10 4 147 4.0E-52 T 23-04-2016 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 PANTHER PTHR11079 7 149 1.3E-49 T 23-04-2016 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 PANTHER PTHR11079:SF72 7 149 1.3E-49 T 23-04-2016 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 Pfam PF14437 MafB19-like deaminase 5 148 6.8E-30 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 NIAKO_RS32515 b6f25a21de03e36c361df8c9ed87a10d 149 SUPERFAMILY SSF53927 4 148 2.68E-47 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NIAKO_RS10100 2515fa31f450dd8c701510fd7a8c288e 186 SMART SM00554 74 185 1.2E-21 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS10100 2515fa31f450dd8c701510fd7a8c288e 186 Pfam PF02469 Fasciclin domain 50 184 4.0E-31 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS10100 2515fa31f450dd8c701510fd7a8c288e 186 Gene3D G3DSA:2.30.180.10 38 184 9.8E-37 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS10100 2515fa31f450dd8c701510fd7a8c288e 186 PANTHER PTHR10900 25 184 1.0E-40 T 23-04-2016 NIAKO_RS10100 2515fa31f450dd8c701510fd7a8c288e 186 SUPERFAMILY SSF82153 30 185 1.7E-38 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS06590 1a0b73493aca66df9c37a93f2b47fcf7 419 Pfam PF13229 Right handed beta helix region 88 216 8.7E-5 T 23-04-2016 NIAKO_RS06590 1a0b73493aca66df9c37a93f2b47fcf7 419 Gene3D G3DSA:2.160.20.10 24 327 4.1E-39 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS06590 1a0b73493aca66df9c37a93f2b47fcf7 419 PANTHER PTHR31683:SF9 24 248 1.4E-67 T 23-04-2016 NIAKO_RS06590 1a0b73493aca66df9c37a93f2b47fcf7 419 PANTHER PTHR31683 24 248 1.4E-67 T 23-04-2016 NIAKO_RS06590 1a0b73493aca66df9c37a93f2b47fcf7 419 SUPERFAMILY SSF51126 19 328 5.79E-43 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 PANTHER PTHR30055 10 166 1.0E-27 T 23-04-2016 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 Gene3D G3DSA:1.10.357.10 8 188 4.0E-43 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 SUPERFAMILY SSF46689 7 74 3.13E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.5E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.5E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.6E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS32245 7821ccd4f8807a29e203340153913a65 213 SUPERFAMILY SSF48498 81 167 2.23E-13 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS04115 a6872e3f98ba71435800bc2024343ab4 265 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 4.4E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS04115 a6872e3f98ba71435800bc2024343ab4 265 PANTHER PTHR30269:SF14 1 264 3.0E-42 T 23-04-2016 NIAKO_RS04115 a6872e3f98ba71435800bc2024343ab4 265 PANTHER PTHR30269 1 264 3.0E-42 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 PANTHER PTHR23502 21 390 1.3E-60 T 23-04-2016 NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 SUPERFAMILY SSF103473 14 390 6.15E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 Gene3D G3DSA:1.20.1250.20 222 390 3.0E-4 T 23-04-2016 NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 Gene3D G3DSA:1.20.1250.20 18 194 1.9E-22 T 23-04-2016 NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 PANTHER PTHR23502:SF19 21 390 1.3E-60 T 23-04-2016 NIAKO_RS18160 1f569c0a4b9064def719e4cddff1b2d9 398 Pfam PF07690 Major Facilitator Superfamily 13 362 2.3E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS36530 df6b7b4ba0ab9a16a30efb5e98f569ef 210 PANTHER PTHR24567 21 203 7.2E-15 T 23-04-2016 NIAKO_RS36530 df6b7b4ba0ab9a16a30efb5e98f569ef 210 Gene3D G3DSA:2.60.120.10 15 170 4.8E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS36530 df6b7b4ba0ab9a16a30efb5e98f569ef 210 PANTHER PTHR24567:SF33 21 203 7.2E-15 T 23-04-2016 NIAKO_RS36530 df6b7b4ba0ab9a16a30efb5e98f569ef 210 SUPERFAMILY SSF51206 27 158 5.11E-13 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS34570 c8736c31b8e3b588adfb9a95f2fa7206 234 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 4 92 1.6E-15 T 23-04-2016 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-7591|UniPathway: UPA00799|UniPathway: UPA00802 NIAKO_RS34570 c8736c31b8e3b588adfb9a95f2fa7206 234 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 131 220 1.6E-11 T 23-04-2016 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-7591|UniPathway: UPA00799|UniPathway: UPA00802 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 PANTHER PTHR22604:SF92 6 415 6.4E-100 T 23-04-2016 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 SUPERFAMILY SSF55347 204 372 1.02E-18 T 23-04-2016 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 Gene3D G3DSA:3.30.360.10 210 407 1.8E-29 T 23-04-2016 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 46 181 2.7E-13 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 SUPERFAMILY SSF51735 39 219 5.84E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 PANTHER PTHR22604 6 415 6.4E-100 T 23-04-2016 NIAKO_RS34075 1f34692bce7a1b3e04f79132b71cfce6 449 Gene3D G3DSA:3.40.50.720 42 209 9.8E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PANTHER PTHR24322 150 182 3.2E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PANTHER PTHR24322 11 134 3.2E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PANTHER PTHR24322:SF366 150 182 3.2E-42 T 23-04-2016 NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PANTHER PTHR24322:SF366 11 134 3.2E-42 T 23-04-2016 NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 9.4E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.4E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 9.4E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.4E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.4E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 SUPERFAMILY SSF51735 5 246 6.6E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 5.5E-61 T 23-04-2016 NIAKO_RS20975 7b5752634d2266d9c20b677335da8f06 249 Gene3D G3DSA:3.40.50.720 1 246 2.0E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 6.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 6.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 Gene3D G3DSA:1.10.10.60 237 282 1.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 PANTHER PTHR11019:SF45 29 282 1.8E-38 T 23-04-2016 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 SUPERFAMILY SSF46689 237 282 1.3E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 PANTHER PTHR11019 29 282 1.8E-38 T 23-04-2016 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 SMART SM00342 199 280 6.3E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 SUPERFAMILY SSF51215 39 126 1.28E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS19745 dae57aa1d1451984880159c370073838 285 Pfam PF12833 Helix-turn-helix domain 203 281 9.2E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS12660 f7119b9c2621664d685bb74015051fc0 443 Pfam PF02321 Outer membrane efflux protein 257 437 1.7E-30 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS12660 f7119b9c2621664d685bb74015051fc0 443 Pfam PF02321 Outer membrane efflux protein 25 225 2.7E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS12660 f7119b9c2621664d685bb74015051fc0 443 PANTHER PTHR30026 1 442 3.9E-44 T 23-04-2016 NIAKO_RS12660 f7119b9c2621664d685bb74015051fc0 443 Gene3D G3DSA:1.20.1600.10 19 441 4.3E-65 T 23-04-2016 NIAKO_RS12660 f7119b9c2621664d685bb74015051fc0 443 SUPERFAMILY SSF56954 2 441 1.31E-70 T 23-04-2016 NIAKO_RS24720 80bc8e356d4ef56572596303863fafcc 228 Pfam PF01578 Cytochrome C assembly protein 8 162 2.8E-18 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NIAKO_RS24720 80bc8e356d4ef56572596303863fafcc 228 PANTHER PTHR30071 1 216 1.1E-23 T 23-04-2016 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 259 1.1E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 341 1.3E-66 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 PANTHER PTHR30158:SF6 31 355 1.8E-92 T 23-04-2016 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 PANTHER PTHR30158 31 355 1.8E-92 T 23-04-2016 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 Gene3D G3DSA:2.40.50.100 151 182 3.2E-16 T 23-04-2016 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 Gene3D G3DSA:2.40.50.100 57 90 3.2E-16 T 23-04-2016 NIAKO_RS13830 bd749222340cdbcbb34791a4e0a3c165 359 SUPERFAMILY SSF111369 46 259 6.02E-48 T 23-04-2016 NIAKO_RS09005 c1eb67d8c564240f0094e7ac19b489c8 507 Gene3D G3DSA:1.25.40.10 203 314 7.9E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09005 c1eb67d8c564240f0094e7ac19b489c8 507 Gene3D G3DSA:1.25.40.10 356 443 7.9E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09005 c1eb67d8c564240f0094e7ac19b489c8 507 Pfam PF07980 SusD family 361 507 4.5E-30 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS09005 c1eb67d8c564240f0094e7ac19b489c8 507 SUPERFAMILY SSF48452 20 507 1.06E-92 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09005 c1eb67d8c564240f0094e7ac19b489c8 507 Pfam PF14322 Starch-binding associating with outer membrane 80 224 2.0E-17 T 23-04-2016 NIAKO_RS37065 9a884621c34c0b3c0e9049819c49bf13 656 Gene3D G3DSA:2.60.40.1120 102 175 3.2E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS37065 9a884621c34c0b3c0e9049819c49bf13 656 SUPERFAMILY SSF49464 101 179 4.84E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS36660 84ad500a2e560cf56ff7b02fc5433824 350 Pfam PF06580 Histidine kinase 169 246 5.1E-24 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36660 84ad500a2e560cf56ff7b02fc5433824 350 PANTHER PTHR34220:SF1 15 350 3.0E-50 T 23-04-2016 NIAKO_RS36660 84ad500a2e560cf56ff7b02fc5433824 350 SUPERFAMILY SSF55874 253 348 5.22E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36660 84ad500a2e560cf56ff7b02fc5433824 350 PANTHER PTHR34220 15 350 3.0E-50 T 23-04-2016 NIAKO_RS19180 97a2130417f210b4d17d4a71f123c11c 162 PANTHER PTHR10545 11 161 2.5E-29 T 23-04-2016 NIAKO_RS19180 97a2130417f210b4d17d4a71f123c11c 162 Pfam PF00583 Acetyltransferase (GNAT) family 66 138 2.8E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS19180 97a2130417f210b4d17d4a71f123c11c 162 PANTHER PTHR10545:SF38 11 161 2.5E-29 T 23-04-2016 NIAKO_RS19180 97a2130417f210b4d17d4a71f123c11c 162 Gene3D G3DSA:3.40.630.30 13 160 5.5E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS19180 97a2130417f210b4d17d4a71f123c11c 162 SUPERFAMILY SSF55729 14 157 8.06E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS15605 96dd52503ffe511db219366aed5835c7 83 PANTHER PTHR24012 5 75 1.3E-14 T 23-04-2016 NIAKO_RS15605 96dd52503ffe511db219366aed5835c7 83 Gene3D G3DSA:3.30.70.330 2 75 6.3E-18 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15605 96dd52503ffe511db219366aed5835c7 83 SUPERFAMILY SSF54928 2 76 3.09E-19 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15605 96dd52503ffe511db219366aed5835c7 83 SMART SM00360 2 75 1.1E-15 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS15605 96dd52503ffe511db219366aed5835c7 83 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 72 6.0E-13 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 Pfam PF12704 MacB-like periplasmic core domain 20 240 3.4E-20 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 Pfam PF02687 FtsX-like permease family 302 419 1.1E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 Pfam PF02687 FtsX-like permease family 692 801 2.3E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 PANTHER PTHR30572:SF4 414 813 2.8E-71 T 23-04-2016 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 PANTHER PTHR30572:SF4 299 372 2.8E-71 T 23-04-2016 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 PANTHER PTHR30572 414 813 2.8E-71 T 23-04-2016 NIAKO_RS16505 db6a7d424bd94436c4fa644df05fa9dc 813 PANTHER PTHR30572 299 372 2.8E-71 T 23-04-2016 NIAKO_RS22345 0bce0e963d26dd2a1af32a2372d51ce7 333 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 7 314 1.1E-54 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS22345 0bce0e963d26dd2a1af32a2372d51ce7 333 Pfam PF11751 Protein of unknown function (DUF3308) 23 314 3.7E-42 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 SUPERFAMILY SSF56091 516 612 1.22E-11 T 23-04-2016 NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 SUPERFAMILY SSF56091 639 763 1.22E-11 T 23-04-2016 NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 SUPERFAMILY SSF56300 182 402 1.54E-45 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 SUPERFAMILY SSF52540 14 139 2.14E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 469 787 1.2E-150 T 23-04-2016 IPR032380 Polynucleotide kinase-phosphatase, ligase domain NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Gene3D G3DSA:3.40.50.300 14 142 6.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Pfam PF13671 AAA domain 14 140 4.0E-22 T 23-04-2016 NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Gene3D G3DSA:3.60.21.10 179 415 5.0E-51 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 791 850 1.3E-32 T 23-04-2016 IPR032390 Polynucleotide kinase-phosphatase, C-terminal NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 PANTHER PTHR24032 174 416 3.4E-51 T 23-04-2016 NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 6 850 0.0 T 23-04-2016 IPR024028 Polynucleotide kinase-phosphatase, bacterial NIAKO_RS35360 ac06747d902e328011313470320f7be9 850 Pfam PF00149 Calcineurin-like phosphoesterase 186 376 2.1E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS33290 09adea669d5e592957e2a1c630dce820 327 PANTHER PTHR10366 7 322 4.9E-117 T 23-04-2016 NIAKO_RS33290 09adea669d5e592957e2a1c630dce820 327 Pfam PF02719 Polysaccharide biosynthesis protein 8 280 8.3E-103 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NIAKO_RS33290 09adea669d5e592957e2a1c630dce820 327 SUPERFAMILY SSF51735 1 258 4.28E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33290 09adea669d5e592957e2a1c630dce820 327 PANTHER PTHR10366:SF360 7 322 4.9E-117 T 23-04-2016 NIAKO_RS33290 09adea669d5e592957e2a1c630dce820 327 Gene3D G3DSA:3.40.50.720 7 240 6.2E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 PANTHER PTHR10982 1 296 3.0E-138 T 23-04-2016 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 Gene3D G3DSA:3.40.366.10 195 290 1.5E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 Gene3D G3DSA:3.40.366.10 2 118 1.5E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 Pfam PF00698 Acyl transferase domain 5 274 1.6E-36 T 23-04-2016 IPR014043 Acyl transferase NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 288 1.3E-100 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 Gene3D G3DSA:3.30.70.250 121 194 8.8E-28 T 23-04-2016 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 PIRSF PIRSF000446 1 296 4.5E-94 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 SUPERFAMILY SSF55048 126 191 9.02E-17 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 SUPERFAMILY SSF52151 188 293 6.28E-73 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 SUPERFAMILY SSF52151 3 118 6.28E-73 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS24965 c7c1a32e6796fb23378ba6f8434a3aa3 296 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 295 9.6E-33 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain NIAKO_RS30995 fc328bd34535cc88dcbca5a701d30464 315 Gene3D G3DSA:1.10.3720.10 41 128 9.2E-4 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS30995 fc328bd34535cc88dcbca5a701d30464 315 Pfam PF06580 Histidine kinase 131 208 4.9E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS30995 fc328bd34535cc88dcbca5a701d30464 315 PANTHER PTHR34220 12 315 1.3E-50 T 23-04-2016 NIAKO_RS37205 28c1374f4143531364185066f4bb93c0 311 Gene3D G3DSA:3.90.550.10 4 190 2.2E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37205 28c1374f4143531364185066f4bb93c0 311 PANTHER PTHR22916:SF29 4 193 5.1E-30 T 23-04-2016 NIAKO_RS37205 28c1374f4143531364185066f4bb93c0 311 Pfam PF00535 Glycosyl transferase family 2 6 128 1.7E-24 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS37205 28c1374f4143531364185066f4bb93c0 311 PANTHER PTHR22916 4 193 5.1E-30 T 23-04-2016 NIAKO_RS37205 28c1374f4143531364185066f4bb93c0 311 SUPERFAMILY SSF53448 1 280 9.5E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS28770 6f38e7e6457a169c58a975de01ac9495 271 Pfam PF07859 alpha/beta hydrolase fold 50 248 2.0E-40 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS28770 6f38e7e6457a169c58a975de01ac9495 271 PANTHER PTHR23024 39 271 1.7E-45 T 23-04-2016 NIAKO_RS28770 6f38e7e6457a169c58a975de01ac9495 271 SUPERFAMILY SSF53474 21 271 6.28E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS28770 6f38e7e6457a169c58a975de01ac9495 271 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 50 66 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 NIAKO_RS28770 6f38e7e6457a169c58a975de01ac9495 271 Gene3D G3DSA:3.40.50.1820 14 269 2.1E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS30350 8e379525ae68c2e3fe99af4e67637dc5 115 SUPERFAMILY SSF54593 1 113 7.56E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS30350 8e379525ae68c2e3fe99af4e67637dc5 115 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 5.4E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS30350 8e379525ae68c2e3fe99af4e67637dc5 115 Gene3D G3DSA:3.10.180.10 1 114 4.3E-16 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 Gene3D G3DSA:3.40.630.10 26 82 9.9E-56 T 23-04-2016 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 Gene3D G3DSA:3.40.630.10 230 429 9.9E-56 T 23-04-2016 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 Pfam PF13180 PDZ domain 471 547 1.6E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 Gene3D G3DSA:2.30.42.10 479 545 1.0E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 SUPERFAMILY SSF53187 220 440 1.45E-56 T 23-04-2016 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 SUPERFAMILY SSF53187 31 75 1.45E-56 T 23-04-2016 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 Pfam PF04389 Peptidase family M28 238 429 3.6E-44 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 SUPERFAMILY SSF50156 470 545 1.45E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS37380 928374e6a13439932d2ea084173d0e8f 549 PANTHER PTHR12147 40 441 2.4E-41 T 23-04-2016 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 PANTHER PTHR23135:SF2 3 446 1.4E-147 T 23-04-2016 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Gene3D G3DSA:3.40.50.720 2 91 1.4E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Pfam PF08245 Mur ligase middle domain 109 285 6.6E-32 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 SUPERFAMILY SSF53623 100 305 1.7E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Gene3D G3DSA:3.40.1190.10 92 306 1.6E-57 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 PANTHER PTHR23135 3 446 1.4E-147 T 23-04-2016 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 5 444 4.6E-125 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Gene3D G3DSA:3.90.190.20 309 443 1.2E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 381 3.7E-7 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 SUPERFAMILY SSF51984 3 92 7.06E-16 T 23-04-2016 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 3 446 32.95 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS36015 84860a273a95c3990673614cec6c0ff1 446 SUPERFAMILY SSF53244 308 446 1.24E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS00905 2fe47b40f0cafe26d39273c8985cb38e 203 Gene3D G3DSA:3.90.850.10 2 200 5.0E-66 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00905 2fe47b40f0cafe26d39273c8985cb38e 203 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 202 3.1E-43 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00905 2fe47b40f0cafe26d39273c8985cb38e 203 SUPERFAMILY SSF56529 2 201 1.14E-61 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS00905 2fe47b40f0cafe26d39273c8985cb38e 203 PANTHER PTHR11820 2 203 6.1E-67 T 23-04-2016 NIAKO_RS00905 2fe47b40f0cafe26d39273c8985cb38e 203 PANTHER PTHR11820:SF7 2 203 6.1E-67 T 23-04-2016 NIAKO_RS32980 90435a8893a017fdaaaa44e375babf92 107 PANTHER PTHR34389 2 106 1.2E-33 T 23-04-2016 NIAKO_RS32980 90435a8893a017fdaaaa44e375babf92 107 SUPERFAMILY SSF54909 1 106 5.15E-26 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS32980 90435a8893a017fdaaaa44e375babf92 107 PANTHER PTHR34389:SF3 2 106 1.2E-33 T 23-04-2016 NIAKO_RS32980 90435a8893a017fdaaaa44e375babf92 107 Pfam PF05336 Domain of unknown function (DUF718) 2 106 2.0E-28 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 PANTHER PTHR22789:SF8 1 232 1.2E-96 T 23-04-2016 NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 SMART SM01007 9 199 1.7E-53 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 198 1.2E-37 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 SUPERFAMILY SSF53639 5 224 1.2E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 Gene3D G3DSA:3.40.225.10 4 232 1.9E-61 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal NIAKO_RS17890 fe215af4800e126556c8bb56f5b30dfd 232 PANTHER PTHR22789 1 232 1.2E-96 T 23-04-2016 NIAKO_RS34975 8b3f9337fc20a9fd5d28f6b6d89142e7 378 Pfam PF00534 Glycosyl transferases group 1 182 347 1.0E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS34975 8b3f9337fc20a9fd5d28f6b6d89142e7 378 Gene3D G3DSA:3.40.50.2000 184 346 1.2E-20 T 23-04-2016 NIAKO_RS34975 8b3f9337fc20a9fd5d28f6b6d89142e7 378 SUPERFAMILY SSF53756 16 367 4.97E-44 T 23-04-2016 NIAKO_RS34975 8b3f9337fc20a9fd5d28f6b6d89142e7 378 PANTHER PTHR12526 1 367 6.9E-30 T 23-04-2016 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 Gene3D G3DSA:3.30.465.10 115 240 1.1E-15 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 PANTHER PTHR13878 215 257 5.7E-19 T 23-04-2016 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 PANTHER PTHR13878 55 196 5.7E-19 T 23-04-2016 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 Pfam PF01565 FAD binding domain 51 190 1.8E-9 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 SUPERFAMILY SSF56176 52 241 2.06E-18 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS17400 0685c9c9c18f2d8e54095b09b12f5b05 530 Pfam PF04030 D-arabinono-1,4-lactone oxidase 332 526 4.2E-5 T 23-04-2016 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 NIAKO_RS33035 ca93f6de741c588c0340e82162fc6ff9 405 Pfam PF05559 Protein of unknown function (DUF763) 5 317 2.0E-128 T 23-04-2016 IPR008482 Protein of unknown function DUF763 NIAKO_RS33035 ca93f6de741c588c0340e82162fc6ff9 405 PANTHER PTHR38597 2 368 7.4E-164 T 23-04-2016 NIAKO_RS28790 8282ab0becd8bb96596899fed74d23c9 199 SUPERFAMILY SSF47240 41 190 1.49E-45 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS28790 8282ab0becd8bb96596899fed74d23c9 199 PANTHER PTHR30565 41 196 1.3E-43 T 23-04-2016 NIAKO_RS28790 8282ab0becd8bb96596899fed74d23c9 199 Gene3D G3DSA:1.20.1260.10 39 198 1.1E-58 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS28790 8282ab0becd8bb96596899fed74d23c9 199 Pfam PF05974 Domain of unknown function (DUF892) 41 196 4.9E-54 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS28790 8282ab0becd8bb96596899fed74d23c9 199 PANTHER PTHR30565:SF2 41 196 1.3E-43 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF56935 878 922 1.33E-92 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF56935 333 421 1.33E-92 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF56935 112 262 1.33E-92 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF56935 456 798 1.33E-92 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF56935 962 1052 1.33E-92 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.40.170.20 887 912 2.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.40.170.20 954 1052 2.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.40.170.20 342 815 2.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.40.170.20 243 258 2.0E-49 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.60.40.1120 34 121 1.2E-15 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 238 7.9E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 PANTHER PTHR11532:SF57 12 440 5.2E-248 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 PANTHER PTHR11532:SF57 528 1052 5.2E-248 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 PANTHER PTHR11532 12 440 5.2E-248 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 PANTHER PTHR11532 528 1052 5.2E-248 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Gene3D G3DSA:2.170.130.10 122 242 4.2E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 SUPERFAMILY SSF49464 33 113 5.89E-18 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 244 5.0E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 Pfam PF13715 CarboxypepD_reg-like domain 34 115 4.9E-18 T 23-04-2016 NIAKO_RS24175 3300df9b4881b7c16b636ab38bbb5aea 1054 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 33 1053 2.0E-256 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS10665 a920a5564fa6f91bc0f984d7033eb27b 283 Gene3D G3DSA:3.40.50.150 5 183 2.0E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS10665 a920a5564fa6f91bc0f984d7033eb27b 283 Pfam PF05050 Methyltransferase FkbM domain 9 155 2.5E-10 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS10665 a920a5564fa6f91bc0f984d7033eb27b 283 SUPERFAMILY SSF53335 6 175 5.17E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS10665 a920a5564fa6f91bc0f984d7033eb27b 283 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 7 138 2.3E-18 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 9 218 35.633 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 SUPERFAMILY SSF53335 19 214 2.34E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 PANTHER PTHR11579 7 212 2.8E-68 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 Gene3D G3DSA:3.40.50.150 20 216 2.3E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 216 4.2E-58 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NIAKO_RS07425 80d179a44e740795a92e0ff46a82fe20 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 15 215 1.0E-58 T 23-04-2016 NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 PANTHER PTHR24567:SF33 15 186 2.8E-20 T 23-04-2016 NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 PANTHER PTHR24567 15 186 2.8E-20 T 23-04-2016 NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 SMART SM00100 11 130 3.7E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 Gene3D G3DSA:2.60.120.10 5 155 1.4E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 SUPERFAMILY SSF51206 15 129 4.06E-21 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS12330 9fb2dc25af6c48e5a72c361e10e2f9c2 192 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 5.1E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS05975 8d6246293a23950330ae45b115a7ee18 467 PANTHER PTHR35793:SF2 99 464 8.9E-162 T 23-04-2016 NIAKO_RS05975 8d6246293a23950330ae45b115a7ee18 467 Pfam PF07670 Nucleoside recognition 104 212 8.5E-10 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 NIAKO_RS05975 8d6246293a23950330ae45b115a7ee18 467 PANTHER PTHR35793 99 464 8.9E-162 T 23-04-2016 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 229 253 1.1E-34 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 317 336 1.1E-34 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 158 182 1.1E-34 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 369 395 1.1E-34 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 128 147 1.1E-34 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 Pfam PF00361 Proton-conducting membrane transporter 122 405 4.1E-66 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 482 2.5E-137 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PANTHER PTHR22773 1 483 4.4E-139 T 23-04-2016 NIAKO_RS34820 92bf76943198e109d3189307f704fad1 488 PANTHER PTHR22773:SF40 1 483 4.4E-139 T 23-04-2016 NIAKO_RS18830 f265bb0c3368d3f6dc790c94b3fe19fe 661 Gene3D G3DSA:1.25.40.10 236 373 1.5E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18830 f265bb0c3368d3f6dc790c94b3fe19fe 661 Gene3D G3DSA:1.25.40.10 485 587 1.5E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18830 f265bb0c3368d3f6dc790c94b3fe19fe 661 Pfam PF14322 Starch-binding associating with outer membrane 36 253 9.3E-16 T 23-04-2016 NIAKO_RS18830 f265bb0c3368d3f6dc790c94b3fe19fe 661 SUPERFAMILY SSF48452 32 661 2.66E-103 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18830 f265bb0c3368d3f6dc790c94b3fe19fe 661 Pfam PF07980 SusD family 375 661 6.5E-46 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 108 4.9E-12 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 PANTHER PTHR35446 18 171 5.5E-16 T 23-04-2016 NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 PANTHER PTHR35446:SF1 18 171 5.5E-16 T 23-04-2016 NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 Gene3D G3DSA:1.20.1290.10 8 97 7.2E-22 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 Gene3D G3DSA:1.20.1290.10 147 173 7.2E-22 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 103 5.0E-8 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS18870 cff0628b9bb5d4f106e95ac459b1f3f9 179 SUPERFAMILY SSF69118 7 176 6.34E-36 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 Pfam PF03965 Penicillinase repressor 4 117 2.3E-26 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 Gene3D G3DSA:1.10.10.10 1 76 2.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 SUPERFAMILY SSF46785 1 119 1.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 PIRSF PIRSF019455 1 121 9.1E-28 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 PANTHER PTHR34134 1 119 1.2E-26 T 23-04-2016 NIAKO_RS33535 391ec5842c19400da163a456cac906ee 121 PANTHER PTHR34134:SF1 1 119 1.2E-26 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 PANTHER PTHR11804:SF48 159 573 4.3E-127 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 PANTHER PTHR11804:SF48 119 132 4.3E-127 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 Gene3D G3DSA:1.10.1370.10 181 279 1.1E-8 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 Pfam PF01432 Peptidase family M3 176 554 4.0E-42 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 PANTHER PTHR11804 159 573 4.3E-127 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 PANTHER PTHR11804 119 132 4.3E-127 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 SUPERFAMILY SSF55486 43 573 1.47E-73 T 23-04-2016 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 Gene3D G3DSA:3.40.390.10 358 404 5.1E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS31020 53e2998ff3c9ef5f308adbe6c74dfdc5 576 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 24 572 2.2E-169 T 23-04-2016 IPR011976 Peptidase M3B, oligoendopeptidase-related clade 2 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 23-04-2016 IPR020595 MnmG-related, conserved site NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 SUPERFAMILY SSF51905 4 64 9.18E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 SUPERFAMILY SSF51905 95 258 9.18E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 Pfam PF01134 Glucose inhibited division protein A 6 394 9.8E-159 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 620 40.193 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 23-04-2016 IPR020595 MnmG-related, conserved site NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 618 9.2E-255 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 PANTHER PTHR11806 4 618 0.0 T 23-04-2016 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 Pfam PF13932 GidA associated domain 398 615 4.2E-68 T 23-04-2016 IPR026904 GidA associated domain 3 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 PANTHER PTHR11806:SF0 4 618 0.0 T 23-04-2016 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 Gene3D G3DSA:3.50.50.60 4 171 1.9E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS31195 5eec796af41dd1f13c9ba5ac9028833a 620 SMART SM01228 545 616 1.1E-39 T 23-04-2016 NIAKO_RS35770 9c3f79857cbfbb0f3a0fd0813af7b4ff 341 Pfam PF04773 FecR protein 127 219 6.7E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS35770 9c3f79857cbfbb0f3a0fd0813af7b4ff 341 PANTHER PTHR30273 2 332 2.2E-51 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS35770 9c3f79857cbfbb0f3a0fd0813af7b4ff 341 Pfam PF16344 Domain of unknown function (DUF4974) 231 325 9.9E-13 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS35770 9c3f79857cbfbb0f3a0fd0813af7b4ff 341 PANTHER PTHR30273:SF2 2 332 2.2E-51 T 23-04-2016 NIAKO_RS35770 9c3f79857cbfbb0f3a0fd0813af7b4ff 341 PIRSF PIRSF018266 22 330 1.7E-52 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 Gene3D G3DSA:3.20.20.210 1 341 3.1E-146 T 23-04-2016 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 340 46.27 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 337 1.2E-131 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 PANTHER PTHR21091:SF2 1 341 1.3E-150 T 23-04-2016 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 SUPERFAMILY SSF51726 1 340 1.83E-119 T 23-04-2016 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 PANTHER PTHR21091 1 341 1.3E-150 T 23-04-2016 NIAKO_RS28180 7e37af0392f1268a60ad6b852cfc3faa 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 338 2.3E-132 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NIAKO_RS28325 62bbd99eb9460738016ce6b674b75191 147 Pfam PF13673 Acetyltransferase (GNAT) domain 39 131 1.7E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS28325 62bbd99eb9460738016ce6b674b75191 147 PANTHER PTHR13355:SF5 58 137 2.7E-16 T 23-04-2016 NIAKO_RS28325 62bbd99eb9460738016ce6b674b75191 147 Gene3D G3DSA:3.40.630.30 18 132 5.4E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS28325 62bbd99eb9460738016ce6b674b75191 147 PANTHER PTHR13355 58 137 2.7E-16 T 23-04-2016 NIAKO_RS28325 62bbd99eb9460738016ce6b674b75191 147 SUPERFAMILY SSF55729 29 130 3.77E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS04135 7545beac236faa38cb2fd307dbf889e1 230 Gene3D G3DSA:3.60.15.10 18 223 1.3E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04135 7545beac236faa38cb2fd307dbf889e1 230 Pfam PF00753 Metallo-beta-lactamase superfamily 18 213 5.9E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04135 7545beac236faa38cb2fd307dbf889e1 230 PANTHER PTHR11935 1 218 6.7E-26 T 23-04-2016 NIAKO_RS04135 7545beac236faa38cb2fd307dbf889e1 230 SUPERFAMILY SSF56281 18 218 1.27E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04135 7545beac236faa38cb2fd307dbf889e1 230 SMART SM00849 13 213 1.1E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 SUPERFAMILY SSF53756 1 367 9.42E-26 T 23-04-2016 NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 PANTHER PTHR30372:SF0 1 367 7.8E-99 T 23-04-2016 NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 360 5.6E-79 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 Gene3D G3DSA:3.40.50.2000 157 339 2.1E-4 T 23-04-2016 NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 Pfam PF02684 Lipid-A-disaccharide synthetase 4 345 3.0E-92 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NIAKO_RS25935 da61f27b455e8f08d200245249026fd0 369 PANTHER PTHR30372 1 367 7.8E-99 T 23-04-2016 NIAKO_RS12300 e2a7784a18c05872251a896559994856 206 Pfam PF13568 Outer membrane protein beta-barrel domain 21 183 1.4E-21 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS29985 795763c572ccefc08a133111c3c6633f 375 Gene3D G3DSA:3.40.50.2000 254 370 6.9E-17 T 23-04-2016 NIAKO_RS29985 795763c572ccefc08a133111c3c6633f 375 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 273 351 5.0E-13 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NIAKO_RS29985 795763c572ccefc08a133111c3c6633f 375 SUPERFAMILY SSF53756 17 344 5.93E-17 T 23-04-2016 NIAKO_RS14370 2febea99ee5105d9fc64a0119f102513 222 Gene3D G3DSA:3.40.50.720 3 221 2.9E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14370 2febea99ee5105d9fc64a0119f102513 222 PANTHER PTHR14097:SF7 1 217 7.9E-63 T 23-04-2016 NIAKO_RS14370 2febea99ee5105d9fc64a0119f102513 222 SUPERFAMILY SSF51735 2 209 7.85E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14370 2febea99ee5105d9fc64a0119f102513 222 Pfam PF13460 NAD(P)H-binding 10 124 7.6E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14370 2febea99ee5105d9fc64a0119f102513 222 PANTHER PTHR14097 1 217 7.9E-63 T 23-04-2016 NIAKO_RS12550 35a9a3c4c7aba7c02f3dcc46ee61b15e 314 PANTHER PTHR10859 2 314 8.9E-146 T 23-04-2016 NIAKO_RS12550 35a9a3c4c7aba7c02f3dcc46ee61b15e 314 SUPERFAMILY SSF53448 1 259 1.13E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS12550 35a9a3c4c7aba7c02f3dcc46ee61b15e 314 PANTHER PTHR10859:SF100 2 314 8.9E-146 T 23-04-2016 NIAKO_RS12550 35a9a3c4c7aba7c02f3dcc46ee61b15e 314 Pfam PF00535 Glycosyl transferase family 2 4 166 3.4E-33 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS12550 35a9a3c4c7aba7c02f3dcc46ee61b15e 314 Gene3D G3DSA:3.90.550.10 1 174 2.5E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 Gene3D G3DSA:3.90.1150.10 3 70 1.5E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 Gene3D G3DSA:3.90.1150.10 321 426 1.5E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 426 5.9E-187 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 SUPERFAMILY SSF53383 4 426 3.2E-129 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 PANTHER PTHR11986:SF5 2 427 7.4E-217 T 23-04-2016 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 Pfam PF00202 Aminotransferase class-III 33 415 2.3E-81 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 Gene3D G3DSA:3.40.640.10 72 317 5.4E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 PANTHER PTHR11986 2 427 7.4E-217 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS28195 4c28fa72bc37c2ebf68c6d3fdf214b72 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 427 101.749 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 677 2.5E-150 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 SUPERFAMILY SSF52540 4 173 9.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 5.4E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 5.4E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 Gene3D G3DSA:3.40.50.300 3 172 8.1E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649:SF37 264 544 2.7E-216 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649:SF37 3 153 2.7E-216 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649:SF37 573 707 2.7E-216 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 Pfam PF02421 Ferrous iron transport protein B 5 166 5.5E-54 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 Pfam PF07670 Nucleoside recognition 518 681 1.9E-24 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 Pfam PF07670 Nucleoside recognition 348 441 5.6E-15 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649 264 544 2.7E-216 T 23-04-2016 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649 3 153 2.7E-216 T 23-04-2016 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 PANTHER PTHR11649 573 707 2.7E-216 T 23-04-2016 NIAKO_RS31560 7d215a6907de0bff1893b67e6515d53b 707 Pfam PF07664 Ferrous iron transport protein B C terminus 460 512 1.8E-12 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 NIAKO_RS18785 1b94fea9304851ad1a88a38f6c6c0145 520 Pfam PF12771 Starch-binding associating with outer membrane 1 509 2.0E-43 T 23-04-2016 NIAKO_RS18785 1b94fea9304851ad1a88a38f6c6c0145 520 PANTHER PTHR35148 1 509 3.2E-37 T 23-04-2016 NIAKO_RS18785 1b94fea9304851ad1a88a38f6c6c0145 520 SUPERFAMILY SSF48452 20 519 1.9E-86 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 SUPERFAMILY SSF51735 2 217 6.16E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 Gene3D G3DSA:3.40.50.720 2 228 7.3E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 Pfam PF00106 short chain dehydrogenase 3 189 1.9E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PANTHER PTHR24322 7 26 8.1E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PANTHER PTHR24322 47 130 8.1E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS28645 904d042a3e48a10b70e85827558912cc 230 PANTHER PTHR24322 148 179 8.1E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17565 f1842359a28cd5c42b1e9c50dcf50f05 117 SUPERFAMILY SSF69754 8 97 1.11E-9 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS17565 f1842359a28cd5c42b1e9c50dcf50f05 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 10 97 5.8E-5 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS17565 f1842359a28cd5c42b1e9c50dcf50f05 117 Gene3D G3DSA:3.30.160.100 8 97 6.9E-9 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS27860 ab493133bcba8514c9cdd5521799065c 1194 Gene3D G3DSA:2.120.10.30 364 506 6.6E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS27860 ab493133bcba8514c9cdd5521799065c 1194 SUPERFAMILY SSF82171 362 473 3.92E-10 T 23-04-2016 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 SUPERFAMILY SSF48452 281 642 1.52E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 SUPERFAMILY SSF48452 22 251 1.52E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 Pfam PF14322 Starch-binding associating with outer membrane 121 245 1.2E-22 T 23-04-2016 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 Gene3D G3DSA:1.25.40.10 226 375 4.2E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 Gene3D G3DSA:1.25.40.10 466 555 4.2E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09465 e64ddfad28ee9717e9a494af42e2592c 642 Pfam PF07980 SusD family 344 642 9.5E-40 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 Pfam PF00266 Aminotransferase class-V 26 388 7.6E-74 T 23-04-2016 IPR000192 Aminotransferase class V domain NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 Gene3D G3DSA:3.90.1150.10 278 395 3.4E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 PANTHER PTHR11601:SF42 10 397 4.0E-101 T 23-04-2016 NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 210 230 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 SUPERFAMILY SSF53383 12 394 2.26E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 PANTHER PTHR11601 10 397 4.0E-101 T 23-04-2016 NIAKO_RS08320 c944269e78b75479ac096dfd8439e4f1 398 Gene3D G3DSA:3.40.640.10 37 277 2.8E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS13365 e092b0f39f5c0e65195bbc80ae6eaf39 202 Pfam PF01569 PAP2 superfamily 66 183 5.5E-20 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13365 e092b0f39f5c0e65195bbc80ae6eaf39 202 Gene3D G3DSA:1.20.144.10 6 183 2.1E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13365 e092b0f39f5c0e65195bbc80ae6eaf39 202 PANTHER PTHR14969 2 185 2.1E-16 T 23-04-2016 NIAKO_RS13365 e092b0f39f5c0e65195bbc80ae6eaf39 202 SMART SM00014 62 179 1.8E-17 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13365 e092b0f39f5c0e65195bbc80ae6eaf39 202 SUPERFAMILY SSF48317 5 185 2.88E-28 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 Gene3D G3DSA:3.40.50.720 2 243 7.7E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.4E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 SUPERFAMILY SSF51735 5 244 1.1E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.5E-62 T 23-04-2016 NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PANTHER PTHR24322 11 30 7.4E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PANTHER PTHR24322 46 138 7.4E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 PANTHER PTHR24322 154 186 7.4E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24070 6303e892fb865c0b85975a0590cc4e98 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 4.4E-4 T 23-04-2016 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 SUPERFAMILY SSF46689 61 108 7.62E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 Pfam PF12833 Helix-turn-helix domain 31 107 9.5E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 PANTHER PTHR11019 6 115 5.9E-15 T 23-04-2016 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 SMART SM00342 25 107 7.2E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 Gene3D G3DSA:1.10.10.60 7 61 6.4E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 Gene3D G3DSA:1.10.10.60 62 110 3.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11795 0aa7b28175fb2e61348e1cc759f71b24 125 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 103 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS30645 2b22dfbce4559769e773df08ade95cac 406 PANTHER PTHR35339 1 404 1.2E-176 T 23-04-2016 NIAKO_RS30645 2b22dfbce4559769e773df08ade95cac 406 PANTHER PTHR35339:SF3 1 404 1.2E-176 T 23-04-2016 NIAKO_RS30645 2b22dfbce4559769e773df08ade95cac 406 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 32 387 7.7E-118 T 23-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 NIAKO_RS30645 2b22dfbce4559769e773df08ade95cac 406 PIRSF PIRSF014753 18 399 4.5E-108 T 23-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 Gene3D G3DSA:2.60.120.10 262 317 9.0E-4 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 PANTHER PTHR30273:SF2 186 391 3.7E-62 T 23-04-2016 NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 PANTHER PTHR30273:SF2 1 123 3.7E-62 T 23-04-2016 NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 PANTHER PTHR30273 186 391 3.7E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 PANTHER PTHR30273 1 123 3.7E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 Pfam PF16344 Domain of unknown function (DUF4974) 290 388 1.3E-24 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS03985 076b50f1da3ae08a55d1b61ca5532638 391 Pfam PF04773 FecR protein 185 269 2.1E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 Pfam PF02321 Outer membrane efflux protein 272 450 1.9E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 Pfam PF02321 Outer membrane efflux protein 44 240 5.8E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 PANTHER PTHR30026 12 453 3.8E-31 T 23-04-2016 NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 Gene3D G3DSA:1.20.1600.10 40 451 1.6E-43 T 23-04-2016 NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 SUPERFAMILY SSF56954 16 452 3.4E-57 T 23-04-2016 NIAKO_RS20820 4bbd15a4652e95aa152a0f54e551ccbb 453 PANTHER PTHR30026:SF6 12 453 3.8E-31 T 23-04-2016 NIAKO_RS00685 e8f6a387c605fd6df60ad2c4452aaf31 246 Pfam PF02405 Permease MlaE 32 242 1.5E-63 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS00685 e8f6a387c605fd6df60ad2c4452aaf31 246 PANTHER PTHR30188 1 244 8.9E-68 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 Pfam PF13354 Beta-lactamase enzyme family 72 348 1.5E-17 T 23-04-2016 NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 Gene3D G3DSA:3.40.710.10 248 399 5.9E-37 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 Gene3D G3DSA:3.40.710.10 35 182 5.9E-37 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 SUPERFAMILY SSF56601 243 267 5.82E-21 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 SUPERFAMILY SSF56601 313 361 5.82E-21 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS32285 1506ff51a292dd47937f1836c1d4a81e 415 SUPERFAMILY SSF56601 69 184 5.82E-21 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 PANTHER PTHR23501 15 513 4.8E-26 T 23-04-2016 NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 Pfam PF07690 Major Facilitator Superfamily 22 407 5.4E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 Gene3D G3DSA:1.20.1250.20 13 200 2.7E-11 T 23-04-2016 NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 SUPERFAMILY SSF103473 256 428 1.57E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 SUPERFAMILY SSF103473 489 513 1.57E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS20810 ac70d75125d275e6e0336ed07bedb62c 525 SUPERFAMILY SSF103473 6 199 1.57E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 PANTHER PTHR26402 1 221 1.3E-75 T 23-04-2016 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 SUPERFAMILY SSF52172 1 174 1.43E-36 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 Gene3D G3DSA:1.10.10.10 125 223 3.8E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 SMART SM00448 1 112 8.8E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 PANTHER PTHR26402:SF545 1 221 1.3E-75 T 23-04-2016 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 SMART SM00862 145 222 3.2E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 Gene3D G3DSA:3.40.50.2300 1 124 2.4E-35 T 23-04-2016 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 222 2.8E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS03690 6fb0247c8b86bfdbb42889288ef10925 225 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS16810 9bc414df36b077dceab7826b7c2bb4b0 89 Pfam PF12728 Helix-turn-helix domain 33 84 4.2E-7 T 23-04-2016 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 PANTHER PTHR23083 61 206 1.7E-38 T 23-04-2016 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 PANTHER PTHR23083 241 346 1.7E-38 T 23-04-2016 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Gene3D G3DSA:1.25.40.10 150 210 7.3E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 275 308 2.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 309 342 2.7E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 241 274 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 72 105 84.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 139 172 21.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SMART SM00028 173 206 2.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 SUPERFAMILY SSF48452 68 348 2.01E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Pfam PF14559 Tetratricopeptide repeat 119 174 3.0E-6 T 23-04-2016 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Gene3D G3DSA:1.25.40.10 62 149 5.2E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Gene3D G3DSA:1.25.40.10 211 256 2.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Pfam PF00515 Tetratricopeptide repeat 309 342 4.1E-7 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Gene3D G3DSA:1.25.40.10 257 349 1.3E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01700 64b33451718714f27814d34a94978e54 354 Pfam PF13181 Tetratricopeptide repeat 243 271 2.5E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 Gene3D G3DSA:1.10.10.10 123 174 7.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 Pfam PF04542 Sigma-70 region 2 24 90 3.8E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 175 5.4E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 PANTHER PTHR30173 1 175 1.1E-38 T 23-04-2016 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 SUPERFAMILY SSF88659 109 174 5.61E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 SUPERFAMILY SSF88946 2 98 1.88E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 Gene3D G3DSA:1.10.1740.10 2 111 5.9E-25 T 23-04-2016 NIAKO_RS03980 51e8d14610e64ba464b4c09a47ca185f 180 Pfam PF08281 Sigma-70, region 4 123 171 2.5E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS03435 b5ccb8f20b5073007dab26eb15d8bfed 162 SUPERFAMILY SSF49777 20 161 1.18E-41 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS03435 b5ccb8f20b5073007dab26eb15d8bfed 162 Pfam PF01161 Phosphatidylethanolamine-binding protein 33 159 2.7E-34 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS03435 b5ccb8f20b5073007dab26eb15d8bfed 162 PANTHER PTHR30289 16 162 1.1E-41 T 23-04-2016 NIAKO_RS03435 b5ccb8f20b5073007dab26eb15d8bfed 162 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 38 156 7.3E-34 T 23-04-2016 IPR005247 YbhB/YbcL NIAKO_RS03435 b5ccb8f20b5073007dab26eb15d8bfed 162 Gene3D G3DSA:3.90.280.10 19 161 4.0E-48 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS30055 10be5a6b75f638da47216eb4d5b61c26 452 Pfam PF10091 Putative glucoamylase 214 435 1.2E-82 T 23-04-2016 IPR019282 Domain of unknown function DUF2329 NIAKO_RS30055 10be5a6b75f638da47216eb4d5b61c26 452 PIRSF PIRSF028431 10 451 2.4E-150 T 23-04-2016 IPR016883 Uncharacterised conserved protein UCP028431 NIAKO_RS17570 846d6df3f1a770228a1d36ad5b1d78d6 278 Gene3D G3DSA:3.40.50.620 1 143 2.6E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS17570 846d6df3f1a770228a1d36ad5b1d78d6 278 SUPERFAMILY SSF52402 1 150 2.09E-5 T 23-04-2016 NIAKO_RS17570 846d6df3f1a770228a1d36ad5b1d78d6 278 SUPERFAMILY SSF52402 156 276 2.26E-10 T 23-04-2016 NIAKO_RS17570 846d6df3f1a770228a1d36ad5b1d78d6 278 Gene3D G3DSA:3.40.50.620 144 272 2.6E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 PANTHER PTHR23133:SF3 1 183 9.3E-41 T 23-04-2016 NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 Gene3D G3DSA:3.40.50.1000 1 181 4.3E-50 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 PIRSF PIRSF004682 1 186 2.0E-51 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 SUPERFAMILY SSF56784 1 181 5.65E-44 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 PANTHER PTHR23133 1 183 9.3E-41 T 23-04-2016 NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 151 2.3E-30 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 Pfam PF13242 HAD-hyrolase-like 106 176 8.5E-13 T 23-04-2016 NIAKO_RS11000 c29c113d6322558780289557a38cc12e 194 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 149 7.0E-37 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 NIAKO_RS11360 27fe22fb0f5108c4248bb44cc5eebf16 368 PANTHER PTHR30294 1 366 1.7E-92 T 23-04-2016 NIAKO_RS11360 27fe22fb0f5108c4248bb44cc5eebf16 368 PANTHER PTHR30294:SF12 1 366 1.7E-92 T 23-04-2016 NIAKO_RS11360 27fe22fb0f5108c4248bb44cc5eebf16 368 Pfam PF12698 ABC-2 family transporter protein 20 360 2.1E-47 T 23-04-2016 NIAKO_RS02880 f9128a636c304a962234727b7bd7531e 146 SUPERFAMILY SSF50129 61 131 4.04E-12 T 23-04-2016 IPR011032 GroES-like NIAKO_RS02880 f9128a636c304a962234727b7bd7531e 146 Gene3D G3DSA:3.90.180.10 62 133 6.7E-11 T 23-04-2016 IPR011032 GroES-like NIAKO_RS02880 f9128a636c304a962234727b7bd7531e 146 Gene3D G3DSA:1.10.275.10 27 61 1.1E-6 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS33795 e0e16a61b9e40d1d156dd4ade26bf0f1 129 Pfam PF16022 Domain of unknown function (DUF4783) 25 126 3.1E-35 T 23-04-2016 IPR031977 Protein of unknown function DUF4783 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 SMART SM00606 460 581 6.2E-4 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Pfam PF03422 Carbohydrate binding module (family 6) 473 580 1.7E-11 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 PANTHER PTHR31297 27 318 3.1E-46 T 23-04-2016 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 90 347 1.6E-35 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Gene3D G3DSA:2.60.120.260 432 441 8.8E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Gene3D G3DSA:2.60.120.260 474 580 8.8E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 SUPERFAMILY SSF51445 91 347 2.24E-62 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 SUPERFAMILY SSF51445 10 53 2.24E-62 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Gene3D G3DSA:3.20.20.80 25 57 1.3E-64 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 Gene3D G3DSA:3.20.20.80 91 390 1.3E-64 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 PANTHER PTHR31297:SF13 27 318 3.1E-46 T 23-04-2016 NIAKO_RS33525 44aa23c69bb945023d89427396940aad 582 SUPERFAMILY SSF49785 473 579 3.74E-13 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS36895 a4e8fd02606cc3641f774975c2faf66c 131 Pfam PF00072 Response regulator receiver domain 3 119 1.6E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36895 a4e8fd02606cc3641f774975c2faf66c 131 SUPERFAMILY SSF52172 1 127 9.11E-19 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS36895 a4e8fd02606cc3641f774975c2faf66c 131 Gene3D G3DSA:3.40.50.2300 1 127 5.6E-23 T 23-04-2016 NIAKO_RS36895 a4e8fd02606cc3641f774975c2faf66c 131 PANTHER PTHR26402 1 125 1.2E-14 T 23-04-2016 NIAKO_RS36895 a4e8fd02606cc3641f774975c2faf66c 131 SMART SM00448 1 121 1.9E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS13935 37f985a703b29f0dfb7e9fa2c92cced5 307 PANTHER PTHR33254:SF2 128 241 1.9E-14 T 23-04-2016 NIAKO_RS13935 37f985a703b29f0dfb7e9fa2c92cced5 307 SUPERFAMILY SSF89562 76 238 2.62E-22 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS13935 37f985a703b29f0dfb7e9fa2c92cced5 307 Gene3D G3DSA:3.50.30.40 72 240 1.3E-33 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS13935 37f985a703b29f0dfb7e9fa2c92cced5 307 Pfam PF03737 Demethylmenaquinone methyltransferase 80 230 2.4E-17 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS13935 37f985a703b29f0dfb7e9fa2c92cced5 307 PANTHER PTHR33254 128 241 1.9E-14 T 23-04-2016 NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 Gene3D G3DSA:3.40.50.720 2 122 9.1E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 Pfam PF00106 short chain dehydrogenase 3 126 2.4E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 96 116 3.7E-11 T 23-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 76 93 3.7E-11 T 23-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 9 26 3.7E-11 T 23-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 PANTHER PTHR24322 7 127 5.0E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19140 c3abb52061cb45e8256f3f0d960bbb9f 139 SUPERFAMILY SSF51735 1 128 8.98E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 Gene3D G3DSA:3.40.50.300 147 229 8.8E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 Gene3D G3DSA:3.40.50.300 3 106 8.8E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 Pfam PF13177 DNA polymerase III, delta subunit 12 231 3.0E-33 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669:SF8 84 111 3.8E-36 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669:SF8 155 290 3.8E-36 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669:SF8 1 62 3.8E-36 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 SUPERFAMILY SSF52540 3 107 7.04E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 SUPERFAMILY SSF52540 148 270 7.04E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669 84 111 3.8E-36 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669 155 290 3.8E-36 T 23-04-2016 NIAKO_RS28560 c9c3da63869c7e43b293e1004abcad45 401 PANTHER PTHR11669 1 62 3.8E-36 T 23-04-2016 NIAKO_RS28205 0933bc1adbe35c4e49bebb27e62f72ae 374 PANTHER PTHR34219 1 371 1.2E-57 T 23-04-2016 NIAKO_RS28205 0933bc1adbe35c4e49bebb27e62f72ae 374 Pfam PF03929 PepSY-associated TM region 9 367 4.0E-61 T 23-04-2016 IPR005625 PepSY-associated TM protein NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 Pfam PF00535 Glycosyl transferase family 2 3 120 4.2E-20 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 Gene3D G3DSA:3.40.50.1000 308 444 1.1E-14 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 PANTHER PTHR10859:SF93 2 184 1.0E-26 T 23-04-2016 NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 SUPERFAMILY SSF53448 2 212 1.06E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 PANTHER PTHR10859 2 184 1.0E-26 T 23-04-2016 NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 SUPERFAMILY SSF56784 247 455 6.92E-24 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 249 422 2.1E-14 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 Gene3D G3DSA:3.90.550.10 2 202 2.1E-17 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS25195 89480d59ebb64e445db27a72e0e03263 458 Pfam PF12710 haloacid dehalogenase-like hydrolase 249 421 1.7E-8 T 23-04-2016 NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 Pfam PF00571 CBS domain 14 56 7.3E-10 T 23-04-2016 IPR000644 CBS domain NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 Pfam PF00571 CBS domain 73 124 6.7E-10 T 23-04-2016 IPR000644 CBS domain NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 Gene3D G3DSA:3.10.580.10 3 124 3.5E-32 T 23-04-2016 NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 SMART SM00116 80 127 3.2E-5 T 23-04-2016 IPR000644 CBS domain NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 SMART SM00116 15 62 0.0015 T 23-04-2016 IPR000644 CBS domain NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 SUPERFAMILY SSF54631 2 139 2.65E-32 T 23-04-2016 NIAKO_RS05105 1759db2238d14d27466c99a267badd57 145 PANTHER PTHR11911 4 140 3.3E-32 T 23-04-2016 NIAKO_RS31080 7166e98694847cbe57f5a21977863cc1 212 Pfam PF01810 LysE type translocator 14 203 8.4E-21 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS31080 7166e98694847cbe57f5a21977863cc1 212 PANTHER PTHR30086 1 210 2.6E-18 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 376 46.549 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 Gene3D G3DSA:3.20.20.70 1 378 1.5E-123 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 377 1.0E-119 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 332 352 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 PANTHER PTHR11938 1 135 5.2E-90 T 23-04-2016 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 PANTHER PTHR11938 168 378 5.2E-90 T 23-04-2016 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 SUPERFAMILY SSF51395 1 377 4.58E-98 T 23-04-2016 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 Pfam PF01180 Dihydroorotate dehydrogenase 49 377 2.0E-95 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NIAKO_RS27500 91934aef53c5021b1f488f341b49d792 379 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 84 103 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 NIAKO_RS33725 49b75943026731f9337b771a9b767d3d 586 PANTHER PTHR12815 116 412 2.4E-18 T 23-04-2016 NIAKO_RS33725 49b75943026731f9337b771a9b767d3d 586 PANTHER PTHR12815 439 563 2.4E-18 T 23-04-2016 NIAKO_RS33725 49b75943026731f9337b771a9b767d3d 586 PANTHER PTHR12815:SF11 116 412 2.4E-18 T 23-04-2016 NIAKO_RS33725 49b75943026731f9337b771a9b767d3d 586 PANTHER PTHR12815:SF11 439 563 2.4E-18 T 23-04-2016 NIAKO_RS19635 447afe32d06053f0115d5dc18be3a680 755 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 397 483 8.1E-12 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS22550 9e96ccc54c7612645f6e8b4cf791391a 322 PANTHER PTHR30273 1 321 2.2E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS22550 9e96ccc54c7612645f6e8b4cf791391a 322 PANTHER PTHR30273:SF2 1 321 2.2E-62 T 23-04-2016 NIAKO_RS22550 9e96ccc54c7612645f6e8b4cf791391a 322 Pfam PF04773 FecR protein 120 211 1.6E-21 T 23-04-2016 IPR006860 FecR protein NIAKO_RS22550 9e96ccc54c7612645f6e8b4cf791391a 322 Pfam PF16344 Domain of unknown function (DUF4974) 221 320 3.9E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS22550 9e96ccc54c7612645f6e8b4cf791391a 322 PIRSF PIRSF018266 1 322 3.6E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS32815 31a5c5de0597eed38d0e98d7d293217a 347 SUPERFAMILY SSF48452 181 313 6.64E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32815 31a5c5de0597eed38d0e98d7d293217a 347 PANTHER PTHR23083 173 315 6.7E-13 T 23-04-2016 NIAKO_RS32815 31a5c5de0597eed38d0e98d7d293217a 347 PANTHER PTHR23083 78 121 6.7E-13 T 23-04-2016 NIAKO_RS32815 31a5c5de0597eed38d0e98d7d293217a 347 Gene3D G3DSA:1.25.40.10 77 313 5.8E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05845 75fa0a97b2b33c77449d0ccdf8bfcb80 351 Gene3D G3DSA:3.30.160.60 299 334 1.2E-6 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 NIAKO_RS05845 75fa0a97b2b33c77449d0ccdf8bfcb80 351 Pfam PF02618 YceG-like family 46 325 7.3E-65 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like NIAKO_RS05845 75fa0a97b2b33c77449d0ccdf8bfcb80 351 PANTHER PTHR30518:SF2 9 340 6.6E-70 T 23-04-2016 NIAKO_RS05845 75fa0a97b2b33c77449d0ccdf8bfcb80 351 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 332 6.7E-58 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like NIAKO_RS05845 75fa0a97b2b33c77449d0ccdf8bfcb80 351 PANTHER PTHR30518 9 340 6.6E-70 T 23-04-2016 NIAKO_RS11240 42d49589f5981957b5238121abfa8827 223 SUPERFAMILY SSF89550 48 201 9.68E-17 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS11240 42d49589f5981957b5238121abfa8827 223 Gene3D G3DSA:3.20.20.140 52 212 1.8E-12 T 23-04-2016 NIAKO_RS11925 2827de0891ea959d2f5aee9cd9f5d2a8 386 SUPERFAMILY SSF81296 149 222 1.48E-10 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS11925 2827de0891ea959d2f5aee9cd9f5d2a8 386 SUPERFAMILY SSF49785 250 384 1.45E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11925 2827de0891ea959d2f5aee9cd9f5d2a8 386 Gene3D G3DSA:2.60.40.10 75 140 9.9E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS11925 2827de0891ea959d2f5aee9cd9f5d2a8 386 Gene3D G3DSA:2.60.40.10 150 220 7.9E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 PANTHER PTHR10242 15 206 4.4E-37 T 23-04-2016 NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 46 188 1.8E-14 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 SMART SM00478 50 202 7.2E-13 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 Gene3D G3DSA:1.10.1670.10 151 201 1.3E-11 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 Gene3D G3DSA:1.10.340.30 42 149 6.0E-25 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS29930 43979edd69f7701d43437dea2226e7c3 209 SUPERFAMILY SSF48150 34 201 2.79E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 PIRSF PIRSF005943 1 478 2.0E-167 T 23-04-2016 IPR016471 Nicotinamide phosphoribosyl transferase NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 SUPERFAMILY SSF51690 144 472 2.16E-39 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 Gene3D G3DSA:3.20.140.10 7 397 7.4E-8 T 23-04-2016 NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 177 405 4.2E-51 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 PANTHER PTHR11098 6 477 8.3E-199 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NIAKO_RS28940 5a31d1da99bb02896c377425409fb069 479 PANTHER PTHR11098:SF2 6 477 8.3E-199 T 23-04-2016 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 SUPERFAMILY SSF111352 39 427 3.92E-115 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 PANTHER PTHR11730:SF17 15 443 2.1E-172 T 23-04-2016 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 ProSitePatterns PS01219 Ammonium transporters signature. 199 224 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 PANTHER PTHR11730 15 443 2.1E-172 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 Pfam PF00909 Ammonium Transporter Family 45 444 9.5E-121 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 Gene3D G3DSA:1.10.3430.10 37 427 3.6E-128 T 23-04-2016 IPR029020 Ammonium/urea transporter NIAKO_RS00530 4a80d176e0135bc61ef145fd08a5558b 466 TIGRFAM TIGR00836 amt: ammonium transporter 43 444 1.8E-131 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NIAKO_RS09665 032d38188f96e01759fe8daca9a2c920 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 213 7.2E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09665 032d38188f96e01759fe8daca9a2c920 224 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 8 216 4.0E-71 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 NIAKO_RS09665 032d38188f96e01759fe8daca9a2c920 224 SUPERFAMILY SSF161098 4 210 4.19E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09665 032d38188f96e01759fe8daca9a2c920 224 Gene3D G3DSA:1.10.3720.10 6 220 2.9E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09665 032d38188f96e01759fe8daca9a2c920 224 PANTHER PTHR30183 3 219 6.4E-64 T 23-04-2016 NIAKO_RS34955 7cb4d07d55651e87c42c33052520947f 359 SUPERFAMILY SSF53756 56 342 2.77E-39 T 23-04-2016 NIAKO_RS34955 7cb4d07d55651e87c42c33052520947f 359 Pfam PF13692 Glycosyl transferases group 1 215 303 1.3E-14 T 23-04-2016 NIAKO_RS34955 7cb4d07d55651e87c42c33052520947f 359 Gene3D G3DSA:3.40.50.2000 194 310 9.8E-8 T 23-04-2016 NIAKO_RS34955 7cb4d07d55651e87c42c33052520947f 359 PANTHER PTHR12526 64 340 2.1E-18 T 23-04-2016 NIAKO_RS34955 7cb4d07d55651e87c42c33052520947f 359 Pfam PF13439 Glycosyltransferase Family 4 48 173 7.3E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS08055 72f139ce26942f859453528e4e60aec2 114 SUPERFAMILY SSF46785 15 112 4.2E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08055 72f139ce26942f859453528e4e60aec2 114 Gene3D G3DSA:1.10.10.10 6 112 6.5E-41 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08055 72f139ce26942f859453528e4e60aec2 114 PANTHER PTHR33204:SF2 6 109 7.3E-40 T 23-04-2016 NIAKO_RS08055 72f139ce26942f859453528e4e60aec2 114 Pfam PF01638 HxlR-like helix-turn-helix 28 111 1.5E-32 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS08055 72f139ce26942f859453528e4e60aec2 114 PANTHER PTHR33204 6 109 7.3E-40 T 23-04-2016 NIAKO_RS36065 8e61260850a8d0a808f3096fd6d83784 221 SUPERFAMILY SSF55486 74 156 1.32E-8 T 23-04-2016 NIAKO_RS36065 8e61260850a8d0a808f3096fd6d83784 221 Gene3D G3DSA:3.40.390.10 82 153 9.6E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS15755 afba51977aa4800603f8ae480937d6ee 202 PANTHER PTHR10108 29 132 1.1E-22 T 23-04-2016 NIAKO_RS15755 afba51977aa4800603f8ae480937d6ee 202 Gene3D G3DSA:3.40.50.150 25 178 1.0E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS15755 afba51977aa4800603f8ae480937d6ee 202 Pfam PF08241 Methyltransferase domain 32 132 6.2E-22 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS15755 afba51977aa4800603f8ae480937d6ee 202 SUPERFAMILY SSF53335 19 149 3.07E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS08470 c7b4934659af574d1051281d3dc398ab 485 PANTHER PTHR22935:SF80 79 311 1.3E-34 T 23-04-2016 NIAKO_RS08470 c7b4934659af574d1051281d3dc398ab 485 SUPERFAMILY SSF56601 8 333 2.9E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS08470 c7b4934659af574d1051281d3dc398ab 485 Gene3D G3DSA:3.40.710.10 45 321 7.1E-44 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS08470 c7b4934659af574d1051281d3dc398ab 485 PANTHER PTHR22935 79 311 1.3E-34 T 23-04-2016 NIAKO_RS08470 c7b4934659af574d1051281d3dc398ab 485 Pfam PF00144 Beta-lactamase 56 313 4.8E-21 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 Pfam PF14905 Outer membrane protein beta-barrel family 394 850 7.8E-33 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 SUPERFAMILY SSF56935 554 679 4.26E-23 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 SUPERFAMILY SSF56935 716 829 4.26E-23 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 SUPERFAMILY SSF56935 76 478 4.26E-23 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 PANTHER PTHR30069 48 306 4.3E-20 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 PANTHER PTHR30069 347 855 4.3E-20 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 PANTHER PTHR30069:SF12 48 306 4.3E-20 T 23-04-2016 NIAKO_RS32315 aa5b2313de0d8a9d42d829ed2917f376 858 PANTHER PTHR30069:SF12 347 855 4.3E-20 T 23-04-2016 NIAKO_RS03295 026060c515101a7ebff1e70d0434d965 106 Gene3D G3DSA:2.40.50.40 5 65 1.8E-12 T 23-04-2016 NIAKO_RS03295 026060c515101a7ebff1e70d0434d965 106 Pfam PF04397 LytTr DNA-binding domain 12 102 1.6E-11 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS03295 026060c515101a7ebff1e70d0434d965 106 SMART SM00850 11 103 1.0E-14 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS13395 3cad7814d8c0188b7ad6f0b5c0158248 527 PANTHER PTHR33908:SF3 1 373 2.1E-66 T 23-04-2016 NIAKO_RS13395 3cad7814d8c0188b7ad6f0b5c0158248 527 PANTHER PTHR33908 1 373 2.1E-66 T 23-04-2016 NIAKO_RS13395 3cad7814d8c0188b7ad6f0b5c0158248 527 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 49 233 2.5E-21 T 23-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 NIAKO_RS32590 4132852096b0b0f958d017f696bc5073 621 Pfam PF13584 Oxygen tolerance 31 498 5.2E-86 T 23-04-2016 IPR025738 Aerotolerance-related protein BatD NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 PANTHER PTHR32305 332 477 9.5E-12 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 PANTHER PTHR32305 515 539 9.5E-12 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 Gene3D G3DSA:2.40.50.230 359 432 2.5E-21 T 23-04-2016 IPR006531 Gp5 N-terminal NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 Pfam PF05954 Phage late control gene D protein (GPD) 56 326 4.1E-17 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 SUPERFAMILY SSF69255 357 432 1.26E-21 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 SUPERFAMILY SSF69279 19 184 5.95E-21 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 PANTHER PTHR32305:SF7 332 477 9.5E-12 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 PANTHER PTHR32305:SF7 515 539 9.5E-12 T 23-04-2016 NIAKO_RS35250 b92edecfb6b774566d1347a2c0552987 552 Gene3D G3DSA:3.55.50.10 106 180 1.9E-6 T 23-04-2016 NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PANTHER PTHR24322 167 199 4.9E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PANTHER PTHR24322 25 150 4.9E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 Pfam PF00106 short chain dehydrogenase 22 205 1.8E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 8.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 8.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 8.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 8.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 8.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 8.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 8.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 SUPERFAMILY SSF51735 16 251 2.79E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PANTHER PTHR24322:SF417 167 199 4.9E-56 T 23-04-2016 NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 PANTHER PTHR24322:SF417 25 150 4.9E-56 T 23-04-2016 NIAKO_RS33505 b3eb924fd55ecc5bff21edaddd2de774 296 Gene3D G3DSA:3.40.50.720 20 264 2.4E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 278 3.0E-90 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 86 1.5E-41 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.0E-49 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PRINTS PR00108 Thymidylate synthase family signature 211 228 3.0E-49 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PRINTS PR00108 Thymidylate synthase family signature 142 157 3.0E-49 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PRINTS PR00108 Thymidylate synthase family signature 116 135 3.0E-49 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PRINTS PR00108 Thymidylate synthase family signature 173 199 3.0E-49 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 Hamap MF_00008 Thymidylate synthase [thyA]. 1 278 45.789 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 ProSitePatterns PS00091 Thymidylate synthase active site. 127 155 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 PANTHER PTHR11548 1 278 2.5E-183 T 23-04-2016 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 Gene3D G3DSA:3.30.572.10 1 278 1.6E-131 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 SUPERFAMILY SSF55831 1 278 1.15E-126 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS22530 4b41eadf23e2a7d9e639a3be681d93eb 278 Pfam PF00303 Thymidylate synthase 2 278 3.5E-125 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 Gene3D G3DSA:3.40.50.2000 16 306 1.9E-18 T 23-04-2016 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 SUPERFAMILY SSF53756 11 550 8.64E-123 T 23-04-2016 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 Pfam PF00343 Carbohydrate phosphorylase 317 467 2.8E-8 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 PANTHER PTHR11468:SF9 19 550 7.7E-115 T 23-04-2016 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 PANTHER PTHR11468 19 550 7.7E-115 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 Gene3D G3DSA:3.40.50.2000 311 550 1.0E-51 T 23-04-2016 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 324 550 1.1E-60 T 23-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS21400 7cd2ccd698381bbbe678e60988d62861 551 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 20 323 1.1E-67 T 23-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NIAKO_RS31170 42c1eaeb9faf117c753aa80054c60c85 296 PANTHER PTHR35333 26 291 6.9E-26 T 23-04-2016 NIAKO_RS31170 42c1eaeb9faf117c753aa80054c60c85 296 SUPERFAMILY SSF56601 25 287 7.04E-40 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31170 42c1eaeb9faf117c753aa80054c60c85 296 Gene3D G3DSA:3.40.710.10 24 289 8.1E-50 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31170 42c1eaeb9faf117c753aa80054c60c85 296 Pfam PF13354 Beta-lactamase enzyme family 48 255 1.9E-40 T 23-04-2016 NIAKO_RS32990 940b942c9d7932c58e9992097dbb1342 146 PANTHER PTHR23408 6 116 1.2E-12 T 23-04-2016 NIAKO_RS32990 940b942c9d7932c58e9992097dbb1342 146 Gene3D G3DSA:3.40.50.280 7 137 7.9E-35 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS32990 940b942c9d7932c58e9992097dbb1342 146 Pfam PF02310 B12 binding domain 10 110 1.3E-11 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS32990 940b942c9d7932c58e9992097dbb1342 146 SUPERFAMILY SSF52242 6 140 7.59E-41 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS32990 940b942c9d7932c58e9992097dbb1342 146 PANTHER PTHR23408:SF8 6 116 1.2E-12 T 23-04-2016 NIAKO_RS08145 f5ef3a9f3323c690d07f085ccb0dfcc5 153 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 27 146 3.5E-36 T 23-04-2016 IPR005247 YbhB/YbcL NIAKO_RS08145 f5ef3a9f3323c690d07f085ccb0dfcc5 153 Gene3D G3DSA:3.90.280.10 8 150 9.5E-47 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS08145 f5ef3a9f3323c690d07f085ccb0dfcc5 153 PANTHER PTHR30289 9 152 1.6E-38 T 23-04-2016 NIAKO_RS08145 f5ef3a9f3323c690d07f085ccb0dfcc5 153 Pfam PF01161 Phosphatidylethanolamine-binding protein 22 148 4.0E-31 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS08145 f5ef3a9f3323c690d07f085ccb0dfcc5 153 SUPERFAMILY SSF49777 9 151 6.41E-40 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NIAKO_RS36235 f8b84b0b7d27f5af67613c4b5ae6cfc5 332 Pfam PF02265 S1/P1 Nuclease 21 263 1.3E-10 T 23-04-2016 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 NIAKO_RS36235 f8b84b0b7d27f5af67613c4b5ae6cfc5 332 Gene3D G3DSA:1.10.575.10 19 283 3.1E-32 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS36235 f8b84b0b7d27f5af67613c4b5ae6cfc5 332 SUPERFAMILY SSF48537 21 268 5.23E-24 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS02245 b074ac5be5ed019d1d0912dbf7edf219 494 PANTHER PTHR30618 4 472 3.8E-212 T 23-04-2016 NIAKO_RS02245 b074ac5be5ed019d1d0912dbf7edf219 494 PANTHER PTHR30618:SF0 4 472 3.8E-212 T 23-04-2016 NIAKO_RS02245 b074ac5be5ed019d1d0912dbf7edf219 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 13 459 1.3E-134 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 NIAKO_RS02245 b074ac5be5ed019d1d0912dbf7edf219 494 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 8 437 3.5E-127 T 23-04-2016 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0005215|GO:0006810|GO:0016020 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 Gene3D G3DSA:1.10.357.10 74 192 2.3E-16 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 Gene3D G3DSA:1.10.10.60 3 64 1.2E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 SUPERFAMILY SSF46689 4 69 3.44E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 PANTHER PTHR30055 1 193 3.2E-36 T 23-04-2016 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 SUPERFAMILY SSF48498 82 192 5.82E-17 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 PANTHER PTHR30055:SF44 1 193 3.2E-36 T 23-04-2016 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 5.0E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS34900 3dc2e609396066f227fb581c4718fd7a 193 Pfam PF16925 Bacterial transcriptional repressor C-terminal 82 174 1.3E-8 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 Pfam PF01259 SAICAR synthetase 11 251 1.5E-82 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 PANTHER PTHR11609:SF9 3 308 1.1E-88 T 23-04-2016 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 PANTHER PTHR11609 3 308 1.1E-88 T 23-04-2016 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 Gene3D G3DSA:3.30.470.20 101 229 4.1E-47 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 SUPERFAMILY SSF56104 4 286 7.19E-88 T 23-04-2016 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 9 283 21.368 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 Gene3D G3DSA:3.30.200.20 3 100 1.3E-37 T 23-04-2016 NIAKO_RS07600 a95bb9255f670689227621a8e34b17e6 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 190 198 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NIAKO_RS05815 8fbd7904fc48e319b9847ee589db2f19 1020 Pfam PF05170 AsmA family 3 180 1.0E-14 T 23-04-2016 IPR007844 AsmA NIAKO_RS05815 8fbd7904fc48e319b9847ee589db2f19 1020 Pfam PF13502 AsmA-like C-terminal region 699 930 3.0E-36 T 23-04-2016 IPR032712 AsmA-like, C-terminal NIAKO_RS36665 a90030b743a6c42b052cf88726d6ef5d 338 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 133 206 4.3E-22 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS36665 a90030b743a6c42b052cf88726d6ef5d 338 PANTHER PTHR32305 96 209 7.7E-28 T 23-04-2016 NIAKO_RS36665 a90030b743a6c42b052cf88726d6ef5d 338 PANTHER PTHR32305:SF6 96 209 7.7E-28 T 23-04-2016 NIAKO_RS36665 a90030b743a6c42b052cf88726d6ef5d 338 PRINTS PR00394 RHS protein signature 151 171 2.9E-12 T 23-04-2016 IPR001826 RHS protein NIAKO_RS36665 a90030b743a6c42b052cf88726d6ef5d 338 PRINTS PR00394 RHS protein signature 174 193 2.9E-12 T 23-04-2016 IPR001826 RHS protein NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 29 125 8.8E-6 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 PANTHER PTHR31988:SF1 25 121 7.2E-16 T 23-04-2016 NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 PANTHER PTHR31988:SF1 147 278 7.2E-16 T 23-04-2016 NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 PANTHER PTHR31988 25 121 7.2E-16 T 23-04-2016 NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 PANTHER PTHR31988 147 278 7.2E-16 T 23-04-2016 NIAKO_RS12045 e1db1cb2cb7533814ee29b30ca414120 278 SUPERFAMILY SSF52266 27 276 2.98E-55 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS37315 31fbc3e87d2fe65bed54136848076868 231 Pfam PF13568 Outer membrane protein beta-barrel domain 28 204 5.3E-15 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS04730 18568b364e67a77f908f958fa8efd35e 542 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 415 435 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 NIAKO_RS04730 18568b364e67a77f908f958fa8efd35e 542 PANTHER PTHR11819 5 500 5.9E-157 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04730 18568b364e67a77f908f958fa8efd35e 542 Pfam PF00474 Sodium:solute symporter family 37 433 1.1E-91 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04730 18568b364e67a77f908f958fa8efd35e 542 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 433 1.3E-109 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 SUPERFAMILY SSF48013 205 303 1.83E-26 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 Pfam PF01029 NusB family 192 297 3.7E-26 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 Gene3D G3DSA:1.10.940.10 1 43 1.9E-36 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 Gene3D G3DSA:1.10.940.10 210 306 1.9E-36 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 PANTHER PTHR11078 53 314 1.6E-27 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 301 17.229 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 NIAKO_RS04970 e0fa8cf773775663f996d636bc4c585c 326 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 199 299 7.6E-29 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 PANTHER PTHR30273:SF2 302 377 1.3E-62 T 23-04-2016 NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 PANTHER PTHR30273:SF2 1 280 1.3E-62 T 23-04-2016 NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 Pfam PF04773 FecR protein 135 236 1.3E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 PANTHER PTHR30273 302 377 1.3E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 PANTHER PTHR30273 1 280 1.3E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS21595 021485d08831301776d942aab9a658ad 378 Pfam PF16344 Domain of unknown function (DUF4974) 297 376 4.2E-21 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS37470 8c7c2cead61cdde6b473881f6bbb329e 427 Gene3D G3DSA:2.70.70.10 285 426 2.9E-25 T 23-04-2016 NIAKO_RS37470 8c7c2cead61cdde6b473881f6bbb329e 427 Pfam PF01551 Peptidase family M23 330 420 1.3E-13 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS37470 8c7c2cead61cdde6b473881f6bbb329e 427 SUPERFAMILY SSF51261 272 424 2.88E-19 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS37470 8c7c2cead61cdde6b473881f6bbb329e 427 PANTHER PTHR21666 1 427 4.4E-29 T 23-04-2016 NIAKO_RS37470 8c7c2cead61cdde6b473881f6bbb329e 427 PANTHER PTHR21666:SF200 1 427 4.4E-29 T 23-04-2016 NIAKO_RS36775 2e6cda256de68f8cd47410a4506b2fb7 316 Gene3D G3DSA:3.90.550.10 6 216 1.3E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS36775 2e6cda256de68f8cd47410a4506b2fb7 316 SUPERFAMILY SSF53448 6 221 1.76E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS36775 2e6cda256de68f8cd47410a4506b2fb7 316 PANTHER PTHR22916 1 267 4.8E-25 T 23-04-2016 NIAKO_RS36775 2e6cda256de68f8cd47410a4506b2fb7 316 Pfam PF00535 Glycosyl transferase family 2 8 137 5.3E-20 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS31405 580d0ec2c6ef6b3cea2f2830e83087e6 74 Pfam PF09360 Iron-binding zinc finger CDGSH type 11 57 4.2E-19 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 NIAKO_RS31405 580d0ec2c6ef6b3cea2f2830e83087e6 74 SMART SM00704 21 62 2.0E-9 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 NIAKO_RS22220 341fa51e67a6b03d26832b6003341239 352 Gene3D G3DSA:3.20.20.70 55 347 2.6E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS22220 341fa51e67a6b03d26832b6003341239 352 SMART SM01133 70 328 2.1E-35 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 NIAKO_RS22220 341fa51e67a6b03d26832b6003341239 352 Pfam PF01791 DeoC/LacD family aldolase 70 328 9.2E-61 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 NIAKO_RS22220 341fa51e67a6b03d26832b6003341239 352 SUPERFAMILY SSF51569 60 244 1.43E-61 T 23-04-2016 NIAKO_RS22220 341fa51e67a6b03d26832b6003341239 352 SUPERFAMILY SSF51569 272 346 1.43E-61 T 23-04-2016 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 Gene3D G3DSA:3.40.50.1100 99 179 1.4E-21 T 23-04-2016 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 411 7.6E-172 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 PANTHER PTHR10314:SF3 14 413 2.0E-206 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 367 5.4E-50 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 Gene3D G3DSA:3.40.50.1100 180 414 2.6E-81 T 23-04-2016 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 412 49.269 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 SUPERFAMILY SSF53686 10 410 6.16E-136 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 PANTHER PTHR10314 14 413 2.0E-206 T 23-04-2016 NIAKO_RS01790 939528bdf0f31ce5ee31c072b1cf5ba8 415 PIRSF PIRSF001413 1 415 4.5E-156 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NIAKO_RS07780 efc9f8bd0bc8cf0f08be00ef7dfdeb88 126 Pfam PF11373 Protein of unknown function (DUF3175) 39 124 4.2E-44 T 23-04-2016 IPR021513 Ralstonia phage RSL1, Orf186 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 584 661 1.3E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 PANTHER PTHR10795:SF332 73 95 5.8E-47 T 23-04-2016 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 PANTHER PTHR10795:SF332 162 448 5.8E-47 T 23-04-2016 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 Gene3D G3DSA:3.40.50.200 172 467 1.3E-51 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 SUPERFAMILY SSF52743 159 489 3.93E-51 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 SUPERFAMILY SSF52743 69 102 3.93E-51 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 413 423 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 PANTHER PTHR10795 73 95 5.8E-47 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 PANTHER PTHR10795 162 448 5.8E-47 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS24780 12a0baa422b55440a8772ae4fad8168f 661 Pfam PF00082 Subtilase family 185 461 1.8E-27 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 5.7E-45 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 SUPERFAMILY SSF52440 1 113 2.09E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 442 2.7E-223 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 SMART SM00878 334 440 5.9E-70 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 9.6E-77 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Gene3D G3DSA:3.30.470.20 203 441 4.9E-99 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 SUPERFAMILY SSF51246 331 441 1.67E-46 T 23-04-2016 IPR011054 Rudiment single hybrid motif NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Gene3D G3DSA:3.40.50.20 1 129 1.7E-53 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-45 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 PANTHER PTHR18866 1 440 9.2E-301 T 23-04-2016 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 SUPERFAMILY SSF56059 83 350 1.64E-69 T 23-04-2016 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NIAKO_RS01535 cbe4c68765c88c52c7a5b20adce449b0 445 Gene3D G3DSA:3.30.1490.20 130 202 5.1E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS22810 70bb75371f6dcaf8200b439ad546c22b 134 PANTHER PTHR30572 1 134 1.5E-40 T 23-04-2016 NIAKO_RS22810 70bb75371f6dcaf8200b439ad546c22b 134 PANTHER PTHR30572:SF4 1 134 1.5E-40 T 23-04-2016 NIAKO_RS22810 70bb75371f6dcaf8200b439ad546c22b 134 Pfam PF02687 FtsX-like permease family 16 126 2.7E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS12930 9d8bbde2e2e7c245177690458b04bceb 234 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 66 206 1.3E-30 T 23-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 NIAKO_RS25260 d2453e568346a834457ccda8cca8e20c 305 PANTHER PTHR30373 1 305 1.1E-21 T 23-04-2016 NIAKO_RS25260 d2453e568346a834457ccda8cca8e20c 305 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 38 167 1.6E-28 T 23-04-2016 IPR007621 TPM domain NIAKO_RS25260 d2453e568346a834457ccda8cca8e20c 305 PANTHER PTHR30373:SF2 1 305 1.1E-21 T 23-04-2016 NIAKO_RS37095 76137d18c80c644693cceebef4aead66 243 Pfam PF08241 Methyltransferase domain 91 163 5.0E-14 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS37095 76137d18c80c644693cceebef4aead66 243 PANTHER PTHR10108 98 216 8.7E-17 T 23-04-2016 NIAKO_RS37095 76137d18c80c644693cceebef4aead66 243 SUPERFAMILY SSF53335 91 219 6.59E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS37095 76137d18c80c644693cceebef4aead66 243 Gene3D G3DSA:3.40.50.150 90 217 1.1E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS30805 2fdb20bbe063d623e856fcad52d8ce5b 242 Pfam PF06439 Domain of Unknown Function (DUF1080) 37 240 3.8E-45 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS22640 6b422e403c915703c4ac568b0d25c1c1 296 Pfam PF13460 NAD(P)H-binding 7 132 1.2E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22640 6b422e403c915703c4ac568b0d25c1c1 296 SUPERFAMILY SSF51735 1 268 1.76E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22640 6b422e403c915703c4ac568b0d25c1c1 296 PANTHER PTHR14194 1 295 7.9E-25 T 23-04-2016 NIAKO_RS22640 6b422e403c915703c4ac568b0d25c1c1 296 Gene3D G3DSA:3.40.50.720 1 216 3.4E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 SMART SM00448 1 110 2.0E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 SMART SM00850 144 244 4.0E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 Gene3D G3DSA:3.40.50.2300 1 113 6.8E-10 T 23-04-2016 NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 Pfam PF04397 LytTr DNA-binding domain 146 227 5.2E-13 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 Pfam PF00072 Response regulator receiver domain 3 110 1.2E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 SUPERFAMILY SSF52172 1 117 1.57E-13 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19870 bc82a677aab7beb8b86898ab15755575 250 Gene3D G3DSA:2.40.50.40 136 204 4.3E-12 T 23-04-2016 NIAKO_RS33555 a30c0fe6ee717c65bcb93dfc4e90683b 189 Gene3D G3DSA:2.60.120.10 4 157 1.0E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS33555 a30c0fe6ee717c65bcb93dfc4e90683b 189 SUPERFAMILY SSF51206 10 146 1.7E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS33555 a30c0fe6ee717c65bcb93dfc4e90683b 189 PANTHER PTHR24567 6 187 1.0E-16 T 23-04-2016 NIAKO_RS33555 a30c0fe6ee717c65bcb93dfc4e90683b 189 Pfam PF00027 Cyclic nucleotide-binding domain 32 118 8.6E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS25190 925cc9c441eb0560b6a8f51930a2a7c6 122 SUPERFAMILY SSF54928 2 108 4.16E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS25190 925cc9c441eb0560b6a8f51930a2a7c6 122 SMART SM00360 2 75 8.4E-28 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS25190 925cc9c441eb0560b6a8f51930a2a7c6 122 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 2.8E-21 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS25190 925cc9c441eb0560b6a8f51930a2a7c6 122 Gene3D G3DSA:3.30.70.330 2 94 3.6E-31 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS25190 925cc9c441eb0560b6a8f51930a2a7c6 122 PANTHER PTHR24012 1 122 4.4E-28 T 23-04-2016 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 PIRSF PIRSF006468 2 353 8.1E-107 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 Gene3D G3DSA:3.20.10.10 172 339 1.7E-52 T 23-04-2016 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 PANTHER PTHR11825 19 353 6.2E-112 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 SUPERFAMILY SSF56752 8 351 2.62E-97 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 PANTHER PTHR11825:SF2 19 353 6.2E-112 T 23-04-2016 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 45 351 1.1E-94 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 Gene3D G3DSA:3.30.470.10 6 171 2.2E-60 T 23-04-2016 NIAKO_RS28640 a49e7e08e3c5d340479c30cab8856c95 354 Pfam PF01063 Amino-transferase class IV 71 311 2.1E-33 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NIAKO_RS10125 bdac25575bdb3ac1241ace6e9a3b5ad2 509 Pfam PF08811 Protein of unknown function (DUF1800) 2 508 2.6E-97 T 23-04-2016 IPR014917 Protein of unknown function DUF1800 NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 PANTHER PTHR23501 17 415 2.5E-140 T 23-04-2016 NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 Pfam PF07690 Major Facilitator Superfamily 25 365 1.3E-49 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 SUPERFAMILY SSF103473 7 406 1.44E-67 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 Gene3D G3DSA:1.20.1250.20 220 414 6.4E-22 T 23-04-2016 NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 Gene3D G3DSA:1.20.1250.20 22 197 4.4E-32 T 23-04-2016 NIAKO_RS21880 cded1d640c46ea9aa1082ef2b191ded7 432 PANTHER PTHR23501:SF19 17 415 2.5E-140 T 23-04-2016 NIAKO_RS33225 fc619b7eeb4b8917a49106e28667eb69 271 Pfam PF01061 ABC-2 type transporter 26 231 1.3E-20 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 NIAKO_RS33225 fc619b7eeb4b8917a49106e28667eb69 271 PANTHER PTHR30413 5 271 4.6E-94 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NIAKO_RS33225 fc619b7eeb4b8917a49106e28667eb69 271 PANTHER PTHR30413:SF8 5 271 4.6E-94 T 23-04-2016 NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 PANTHER PTHR22604:SF2 20 288 7.9E-141 T 23-04-2016 NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 PANTHER PTHR22604:SF2 309 463 7.9E-141 T 23-04-2016 NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 64 189 1.2E-13 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 23 1.7E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 SUPERFAMILY SSF51735 63 223 3.94E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 Gene3D G3DSA:3.40.50.720 406 449 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 Gene3D G3DSA:3.40.50.720 64 229 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 PANTHER PTHR22604 20 288 7.9E-141 T 23-04-2016 NIAKO_RS17195 e508da3629d2cfba602dc7a508943fb6 482 PANTHER PTHR22604 309 463 7.9E-141 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 38 1003 2.4E-211 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532 565 1001 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532 218 424 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532 38 199 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532 503 529 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.40.170.20 428 806 1.9E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.40.170.20 318 396 1.9E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.40.170.20 253 278 1.9E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.40.170.20 849 1003 1.9E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 227 257 2.5E-18 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.60.40.1120 38 119 1.3E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 251 5.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Pfam PF13715 CarboxypepD_reg-like domain 38 117 5.7E-13 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532:SF57 565 1001 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532:SF57 218 424 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532:SF57 38 199 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 PANTHER PTHR11532:SF57 503 529 1.6E-200 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 Gene3D G3DSA:2.170.130.10 120 252 4.1E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 SUPERFAMILY SSF56935 114 275 5.86E-93 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 SUPERFAMILY SSF56935 309 397 5.86E-93 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 SUPERFAMILY SSF56935 433 779 5.86E-93 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 SUPERFAMILY SSF56935 841 1003 5.86E-93 T 23-04-2016 NIAKO_RS00255 dad41d2e9286502e4dfddcf54166d4ce 1003 SUPERFAMILY SSF49464 38 128 2.49E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS32065 3582ec9ca78297c5089abfc8835bce74 200 Pfam PF13302 Acetyltransferase (GNAT) domain 19 159 3.3E-24 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS32065 3582ec9ca78297c5089abfc8835bce74 200 SUPERFAMILY SSF55729 10 185 1.18E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32065 3582ec9ca78297c5089abfc8835bce74 200 PANTHER PTHR13256 8 194 2.0E-59 T 23-04-2016 NIAKO_RS32065 3582ec9ca78297c5089abfc8835bce74 200 Gene3D G3DSA:3.40.630.30 9 193 6.2E-55 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32065 3582ec9ca78297c5089abfc8835bce74 200 PANTHER PTHR13256:SF20 8 194 2.0E-59 T 23-04-2016 NIAKO_RS26265 7843d9a6b01e98719efebd90fb886126 347 PANTHER PTHR12526 5 345 5.6E-55 T 23-04-2016 NIAKO_RS26265 7843d9a6b01e98719efebd90fb886126 347 SUPERFAMILY SSF53756 20 345 1.03E-66 T 23-04-2016 NIAKO_RS26265 7843d9a6b01e98719efebd90fb886126 347 Gene3D G3DSA:3.40.50.2000 166 320 2.9E-26 T 23-04-2016 NIAKO_RS26265 7843d9a6b01e98719efebd90fb886126 347 Pfam PF00534 Glycosyl transferases group 1 169 321 1.9E-35 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS26265 7843d9a6b01e98719efebd90fb886126 347 Pfam PF13439 Glycosyltransferase Family 4 34 152 1.7E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 SUPERFAMILY SSF52266 382 592 9.77E-41 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 Gene3D G3DSA:3.40.50.1110 387 592 9.7E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 Gene3D G3DSA:3.40.50.1110 186 372 1.3E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 SUPERFAMILY SSF52266 156 371 3.05E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 Pfam PF14607 N-terminus of Esterase_SGNH_hydro-type 27 179 5.4E-47 T 23-04-2016 IPR032740 SGNH hydrolase-type esterase, N-terminal NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 416 580 1.2E-13 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17185 72e011892b9183582240a34ee7de9a8f 592 Pfam PF14606 GDSL-like Lipase/Acylhydrolase family 187 370 7.2E-57 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS22570 b5e29e41fc511f81bc6377260f170716 238 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 39 223 5.2E-45 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS22570 b5e29e41fc511f81bc6377260f170716 238 PANTHER PTHR39200:SF1 1 236 2.0E-30 T 23-04-2016 NIAKO_RS22570 b5e29e41fc511f81bc6377260f170716 238 PANTHER PTHR39200 1 236 2.0E-30 T 23-04-2016 NIAKO_RS20125 36c822fc746767641c5ab5d90e44adcd 473 Gene3D G3DSA:2.60.40.670 56 116 1.7E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS20125 36c822fc746767641c5ab5d90e44adcd 473 Pfam PF16407 PKD-like family 19 168 6.8E-41 T 23-04-2016 IPR032183 PKD-like family NIAKO_RS20125 36c822fc746767641c5ab5d90e44adcd 473 SUPERFAMILY SSF69322 388 468 1.7E-6 T 23-04-2016 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PANTHER PTHR10381 33 231 1.3E-98 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 SUPERFAMILY SSF52096 42 220 5.82E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 33 223 38.811 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 Pfam PF00574 Clp protease 47 220 1.2E-74 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 Gene3D G3DSA:3.90.226.10 47 226 9.4E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PANTHER PTHR10381:SF22 33 231 1.3E-98 T 23-04-2016 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PRINTS PR00127 Clp protease catalytic subunit P signature 141 160 1.1E-45 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PRINTS PR00127 Clp protease catalytic subunit P signature 120 137 1.1E-45 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PRINTS PR00127 Clp protease catalytic subunit P signature 89 109 1.1E-45 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PRINTS PR00127 Clp protease catalytic subunit P signature 49 64 1.1E-45 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 PRINTS PR00127 Clp protease catalytic subunit P signature 198 217 1.1E-45 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NIAKO_RS34330 3ff1326c262a43a4ff5a3e1c28e11808 231 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 120 131 - T 23-04-2016 IPR018215 ClpP, Ser active site NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 SUPERFAMILY SSF46689 237 283 7.62E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 2.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 2.9E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 SUPERFAMILY SSF46689 189 234 2.09E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 Pfam PF12833 Helix-turn-helix domain 210 283 1.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 SMART SM00342 200 283 3.1E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 Gene3D G3DSA:1.10.10.60 239 283 3.6E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 PANTHER PTHR11019 185 282 2.8E-24 T 23-04-2016 NIAKO_RS23845 2f2a70b90c89409e457be7e5ffe2f623 286 Gene3D G3DSA:1.10.10.60 190 238 4.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 351 420 1.6E-25 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 732 757 1.6E-25 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 197 263 1.6E-25 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 58 128 1.6E-25 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 646 731 7.2E-7 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 587 611 7.2E-7 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 Gene3D G3DSA:1.25.10.10 507 549 7.2E-7 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 SUPERFAMILY SSF48371 347 434 6.58E-24 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 SUPERFAMILY SSF48371 45 131 6.58E-24 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 SUPERFAMILY SSF48371 628 745 6.58E-24 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS05230 46d9d4f1221a9b6b479c8e882401ce58 1080 SUPERFAMILY SSF48371 177 260 6.58E-24 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 Pfam PF04616 Glycosyl hydrolases family 43 42 338 5.0E-53 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 PIRSF PIRSF025414 6 356 3.2E-115 T 23-04-2016 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 SUPERFAMILY SSF75005 41 353 2.02E-59 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 Gene3D G3DSA:2.115.10.20 38 355 2.7E-88 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 PANTHER PTHR22925:SF12 41 356 2.1E-99 T 23-04-2016 NIAKO_RS06405 a1a9c735f502603bd44efe60c8f80258 356 PANTHER PTHR22925 41 356 2.1E-99 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS10555 918deb6b13c11442bb7338b5656c713a 920 SUPERFAMILY SSF48208 710 888 5.53E-47 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS10555 918deb6b13c11442bb7338b5656c713a 920 SUPERFAMILY SSF48208 433 660 5.53E-47 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS10555 918deb6b13c11442bb7338b5656c713a 920 PANTHER PTHR10412:SF10 1 887 0.0 T 23-04-2016 NIAKO_RS10555 918deb6b13c11442bb7338b5656c713a 920 PANTHER PTHR10412 1 887 0.0 T 23-04-2016 IPR004888 Glycoside hydrolase family 63 GO:0004573|GO:0009311 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 Gene3D G3DSA:3.40.50.620 243 251 1.7E-49 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 Gene3D G3DSA:3.40.50.620 6 210 1.7E-49 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293:SF6 244 302 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293:SF6 178 211 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293:SF6 1 158 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 SUPERFAMILY SSF52402 4 210 9.31E-62 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293 244 302 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293 178 211 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PANTHER PTHR23293 1 158 1.4E-72 T 23-04-2016 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.1E-124 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 PIRSF PIRSF002936 1 302 4.0E-134 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 NIAKO_RS34340 a7167ffbf1a4647754f750b80e6831fb 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 256 7.4E-46 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 NIAKO_RS01280 9e4ed313ec828c5fe41f31dd39964735 154 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 148 3.8E-25 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS01280 9e4ed313ec828c5fe41f31dd39964735 154 Gene3D G3DSA:3.30.530.20 6 151 1.4E-42 T 23-04-2016 IPR023393 START-like domain NIAKO_RS01280 9e4ed313ec828c5fe41f31dd39964735 154 PANTHER PTHR36929:SF1 9 154 2.2E-35 T 23-04-2016 NIAKO_RS01280 9e4ed313ec828c5fe41f31dd39964735 154 PANTHER PTHR36929 9 154 2.2E-35 T 23-04-2016 NIAKO_RS01280 9e4ed313ec828c5fe41f31dd39964735 154 SUPERFAMILY SSF55961 8 150 1.04E-36 T 23-04-2016 NIAKO_RS22635 e5bc7c97b4f161be962e364d7b60bdd7 132 Pfam PF01638 HxlR-like helix-turn-helix 30 113 7.9E-28 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS22635 e5bc7c97b4f161be962e364d7b60bdd7 132 SUPERFAMILY SSF46785 20 112 2.79E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS22635 e5bc7c97b4f161be962e364d7b60bdd7 132 PANTHER PTHR33204 8 111 6.8E-35 T 23-04-2016 NIAKO_RS22635 e5bc7c97b4f161be962e364d7b60bdd7 132 Gene3D G3DSA:1.10.10.10 8 114 2.9E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 185 31.202 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 2 185 9.2E-53 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 PANTHER PTHR30042 1 186 1.4E-73 T 23-04-2016 NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 PANTHER PTHR30042:SF2 1 186 1.4E-73 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 PIRSF PIRSF001296 1 186 6.0E-64 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NIAKO_RS20285 b462f8bba365e1db9bbe364fd172e041 186 Pfam PF02669 K+-transporting ATPase, c chain 7 183 2.2E-66 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 SUPERFAMILY SSF52172 3 116 2.56E-21 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 PANTHER PTHR26402 3 114 1.2E-18 T 23-04-2016 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 SMART SM00448 3 111 7.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 PANTHER PTHR26402:SF522 3 114 1.2E-18 T 23-04-2016 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 Gene3D G3DSA:2.40.50.40 129 199 7.4E-23 T 23-04-2016 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 SMART SM00850 138 230 1.4E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 Pfam PF04397 LytTr DNA-binding domain 139 229 2.9E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 Pfam PF00072 Response regulator receiver domain 6 111 5.3E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25890 b41e70a4c6af0220a8b685f2447bf4d7 232 Gene3D G3DSA:3.40.50.2300 2 116 2.0E-22 T 23-04-2016 NIAKO_RS04105 64f2be2877a0471af73cc832728010d0 70 Pfam PF11127 Protein of unknown function (DUF2892) 2 54 1.3E-12 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 Pfam PF01625 Peptide methionine sulfoxide reductase 6 152 1.8E-60 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 158 35.993 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 152 3.2E-55 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 PANTHER PTHR10173:SF6 2 152 1.6E-70 T 23-04-2016 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 SUPERFAMILY SSF55068 3 160 3.4E-67 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 PANTHER PTHR10173 2 152 1.6E-70 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NIAKO_RS32145 1f8fc1e818f37723d75b161d2a334371 168 Gene3D G3DSA:3.30.1060.10 3 153 1.2E-67 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NIAKO_RS15895 38ee4d72ee995b1369d5b4ad7b27ad69 149 SUPERFAMILY SSF54909 35 135 6.97E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS15895 38ee4d72ee995b1369d5b4ad7b27ad69 149 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 35 136 9.4E-20 T 23-04-2016 IPR009799 EthD domain NIAKO_RS15895 38ee4d72ee995b1369d5b4ad7b27ad69 149 PANTHER PTHR40260 32 140 1.3E-14 T 23-04-2016 NIAKO_RS15895 38ee4d72ee995b1369d5b4ad7b27ad69 149 Gene3D G3DSA:3.30.70.900 36 134 1.3E-37 T 23-04-2016 NIAKO_RS14550 547990c6017ffb27d13dc7db8827f239 100 PANTHER PTHR11434:SF4 5 99 3.1E-43 T 23-04-2016 NIAKO_RS14550 547990c6017ffb27d13dc7db8827f239 100 PANTHER PTHR11434 5 99 3.1E-43 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS14550 547990c6017ffb27d13dc7db8827f239 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 100 18.836 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS14550 547990c6017ffb27d13dc7db8827f239 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 96 3.4E-25 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS07265 cc7d6bb3879a4d8a4190f38a264e8c03 220 SUPERFAMILY SSF51735 6 211 1.75E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07265 cc7d6bb3879a4d8a4190f38a264e8c03 220 Gene3D G3DSA:3.40.50.720 6 211 1.4E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07265 cc7d6bb3879a4d8a4190f38a264e8c03 220 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 104 2.5E-13 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIAKO_RS07265 cc7d6bb3879a4d8a4190f38a264e8c03 220 PANTHER PTHR14239 4 201 2.0E-28 T 23-04-2016 NIAKO_RS04790 449c65e9ab29baba020e836458971346 107 Gene3D G3DSA:2.60.40.1120 30 93 2.0E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS04790 449c65e9ab29baba020e836458971346 107 SUPERFAMILY SSF49464 29 93 1.0E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 Gene3D G3DSA:3.40.720.10 34 408 7.9E-117 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 SUPERFAMILY SSF53649 34 469 2.51E-134 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 PANTHER PTHR10342:SF199 7 464 1.7E-152 T 23-04-2016 NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 PANTHER PTHR10342 7 464 1.7E-152 T 23-04-2016 NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 Pfam PF00884 Sulfatase 35 371 1.6E-74 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 ProSitePatterns PS00523 Sulfatases signature 1. 81 93 - T 23-04-2016 IPR024607 Sulfatase, conserved site NIAKO_RS00935 3818bab37b9693ac3250c4963d0abbee 482 Gene3D G3DSA:3.30.1120.10 409 476 2.4E-19 T 23-04-2016 NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 Gene3D G3DSA:3.40.50.300 2 206 1.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 PIRSF PIRSF003128 1 552 4.9E-150 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 SUPERFAMILY SSF52540 286 314 1.22E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 SUPERFAMILY SSF52540 2 199 1.22E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 SUPERFAMILY SSF52540 344 510 1.22E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 Gene3D G3DSA:3.40.50.300 430 499 1.3E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 4.4E-132 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.3E-18 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NIAKO_RS26955 bab0e0808255d26e55d6b5e757672706 552 PANTHER PTHR11059 2 552 2.3E-135 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NIAKO_RS10640 3adb2b5957a8460f23781a00c0fbc85a 152 Gene3D G3DSA:3.10.580.10 17 126 1.1E-23 T 23-04-2016 NIAKO_RS10640 3adb2b5957a8460f23781a00c0fbc85a 152 SUPERFAMILY SSF54631 3 124 2.78E-25 T 23-04-2016 NIAKO_RS10640 3adb2b5957a8460f23781a00c0fbc85a 152 PANTHER PTHR11911 17 131 1.2E-19 T 23-04-2016 NIAKO_RS10640 3adb2b5957a8460f23781a00c0fbc85a 152 Pfam PF00571 CBS domain 72 125 1.6E-10 T 23-04-2016 IPR000644 CBS domain NIAKO_RS10640 3adb2b5957a8460f23781a00c0fbc85a 152 PANTHER PTHR11911:SF68 17 131 1.2E-19 T 23-04-2016 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 PANTHER PTHR11609:SF5 16 178 9.2E-94 T 23-04-2016 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 SMART SM01001 14 164 1.1E-89 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 SUPERFAMILY SSF52255 15 178 1.03E-61 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 16 168 31.578 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 Gene3D G3DSA:3.40.50.7700 9 173 5.8E-70 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 PANTHER PTHR11609 16 178 9.2E-94 T 23-04-2016 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 16 170 9.7E-62 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 Pfam PF00731 AIR carboxylase 15 162 2.3E-63 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NIAKO_RS12665 dcc70835a20bc1c50afe3afc82aa63d4 181 PIRSF PIRSF001338 11 175 1.7E-67 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 Gene3D G3DSA:1.10.287.130 257 329 4.8E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 Gene3D G3DSA:3.30.565.10 339 486 2.5E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 SUPERFAMILY SSF47384 249 333 8.04E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 2.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 2.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 2.6E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 332 4.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PANTHER PTHR24423 199 486 3.8E-74 T 23-04-2016 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 PANTHER PTHR24423 143 170 3.8E-74 T 23-04-2016 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 SMART SM00388 265 333 2.6E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 487 1.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 Pfam PF00672 HAMP domain 188 253 1.6E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 SUPERFAMILY SSF55874 323 486 1.44E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS09150 cfa75a965d33ff9460913e3972cfcf7e 489 SMART SM00387 379 489 2.5E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 SUPERFAMILY SSF63829 3 259 4.38E-56 T 23-04-2016 NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 227 245 6.9E-6 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 123 145 6.9E-6 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 185 202 6.9E-6 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 6 242 3.6E-43 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 PANTHER PTHR10907 2 253 1.0E-32 T 23-04-2016 NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 Gene3D G3DSA:2.120.10.30 3 260 4.5E-59 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS18595 79db88fb3000854ffb4fa2972d116c6a 266 PANTHER PTHR10907:SF47 2 253 1.0E-32 T 23-04-2016 NIAKO_RS36270 61dada75f10ad0fc86910903b03f1c15 304 Pfam PF13505 Outer membrane protein beta-barrel domain 3 237 2.3E-11 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS36270 61dada75f10ad0fc86910903b03f1c15 304 Gene3D G3DSA:2.40.160.20 54 214 4.5E-8 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS36270 61dada75f10ad0fc86910903b03f1c15 304 SUPERFAMILY SSF56925 47 238 8.63E-10 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS08865 6b0eecd323cb94358d1fd1a887e7d0ba 129 PANTHER PTHR26402 5 107 1.0E-20 T 23-04-2016 NIAKO_RS08865 6b0eecd323cb94358d1fd1a887e7d0ba 129 SUPERFAMILY SSF52172 3 123 2.13E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08865 6b0eecd323cb94358d1fd1a887e7d0ba 129 Pfam PF00072 Response regulator receiver domain 7 114 1.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08865 6b0eecd323cb94358d1fd1a887e7d0ba 129 SMART SM00448 5 118 2.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08865 6b0eecd323cb94358d1fd1a887e7d0ba 129 Gene3D G3DSA:3.40.50.2300 2 122 1.4E-23 T 23-04-2016 NIAKO_RS17550 91a83f9a0331e5c61b896ab8d5a03377 211 SUPERFAMILY SSF103515 42 209 1.02E-6 T 23-04-2016 IPR005546 Autotransporter beta-domain NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 PANTHER PTHR30097:SF3 54 428 6.1E-75 T 23-04-2016 NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 123 338 2.6E-61 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 SUPERFAMILY SSF111369 136 343 5.36E-16 T 23-04-2016 NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 PANTHER PTHR30097 54 428 6.1E-75 T 23-04-2016 NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 Gene3D G3DSA:2.40.50.100 232 263 2.4E-9 T 23-04-2016 NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 Gene3D G3DSA:2.40.50.100 140 172 2.4E-9 T 23-04-2016 NIAKO_RS30560 68e9e51620833abf5652112b9504de41 428 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 135 411 2.2E-37 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 PANTHER PTHR23135 1 378 1.0E-68 T 23-04-2016 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 SUPERFAMILY SSF53623 94 301 1.83E-34 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Pfam PF08245 Mur ligase middle domain 108 283 9.0E-16 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 SUPERFAMILY SSF53244 303 441 1.56E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 306 379 5.0E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Pfam PF01225 Mur ligase family, catalytic domain 3 96 1.1E-9 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Gene3D G3DSA:3.90.190.20 306 440 7.7E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Gene3D G3DSA:3.40.50.720 1 91 1.2E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 PANTHER PTHR23135:SF5 1 378 1.0E-68 T 23-04-2016 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 SUPERFAMILY SSF51984 1 91 4.84E-17 T 23-04-2016 NIAKO_RS21685 141aa70ba9a0f3fb4d42f3c79056efe5 452 Gene3D G3DSA:3.40.1190.10 99 305 3.5E-49 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NIAKO_RS20445 cbcc0354db0ca10ca1e3f679c2ecb082 128 Pfam PF00072 Response regulator receiver domain 7 120 7.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS20445 cbcc0354db0ca10ca1e3f679c2ecb082 128 PANTHER PTHR26402 5 121 8.7E-20 T 23-04-2016 NIAKO_RS20445 cbcc0354db0ca10ca1e3f679c2ecb082 128 Gene3D G3DSA:3.40.50.2300 6 127 2.0E-26 T 23-04-2016 NIAKO_RS20445 cbcc0354db0ca10ca1e3f679c2ecb082 128 SUPERFAMILY SSF52172 6 124 6.26E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20445 cbcc0354db0ca10ca1e3f679c2ecb082 128 SMART SM00448 5 121 5.9E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 PANTHER PTHR33567:SF1 18 388 5.7E-73 T 23-04-2016 NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 PIRSF PIRSF004810 8 392 7.6E-87 T 23-04-2016 IPR014047 Chromate transporter, long chain NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 PANTHER PTHR33567 18 388 5.7E-73 T 23-04-2016 NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 Pfam PF02417 Chromate transporter 28 189 2.1E-31 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 Pfam PF02417 Chromate transporter 224 385 4.7E-34 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS14220 eb4801912a45b60663d62c6180701d9a 392 TIGRFAM TIGR00937 2A51: chromate efflux transporter 33 386 9.3E-80 T 23-04-2016 IPR014047 Chromate transporter, long chain NIAKO_RS25975 45740c83854790227e0660e4f50c6c67 656 SUPERFAMILY SSF50974 40 510 3.66E-75 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal NIAKO_RS25975 45740c83854790227e0660e4f50c6c67 656 Gene3D G3DSA:2.60.40.420 525 636 6.5E-34 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS25975 45740c83854790227e0660e4f50c6c67 656 SUPERFAMILY SSF49503 533 636 4.24E-20 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS25975 45740c83854790227e0660e4f50c6c67 656 Gene3D G3DSA:2.130.10.10 85 522 2.1E-113 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS25975 45740c83854790227e0660e4f50c6c67 656 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 36 637 1.7E-283 T 23-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent NIAKO_RS25990 4b5a154d06530dbf6df77946d88b8c1d 183 PANTHER PTHR30565 20 179 2.4E-47 T 23-04-2016 NIAKO_RS25990 4b5a154d06530dbf6df77946d88b8c1d 183 Gene3D G3DSA:1.20.1260.10 13 178 3.4E-62 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS25990 4b5a154d06530dbf6df77946d88b8c1d 183 Pfam PF05974 Domain of unknown function (DUF892) 20 176 2.1E-55 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS25990 4b5a154d06530dbf6df77946d88b8c1d 183 PANTHER PTHR30565:SF2 20 179 2.4E-47 T 23-04-2016 NIAKO_RS25990 4b5a154d06530dbf6df77946d88b8c1d 183 SUPERFAMILY SSF47240 13 169 4.4E-49 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS27865 aafc97d9fe0ba966af64ab9de30c90f9 233 Pfam PF07099 Protein of unknown function (DUF1361) 57 220 7.8E-44 T 23-04-2016 IPR009793 Protein of unknown function DUF1361 NIAKO_RS18620 1ba42dde25869c380faf43e7adb99a8d 342 Pfam PF00701 Dihydrodipicolinate synthetase family 25 333 8.4E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS18620 1ba42dde25869c380faf43e7adb99a8d 342 SMART SM01130 12 336 1.4E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS18620 1ba42dde25869c380faf43e7adb99a8d 342 SUPERFAMILY SSF51569 17 335 1.78E-29 T 23-04-2016 NIAKO_RS18620 1ba42dde25869c380faf43e7adb99a8d 342 Gene3D G3DSA:3.20.20.70 17 336 2.9E-45 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 4.5E-63 T 23-04-2016 NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PANTHER PTHR24322 11 181 1.8E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 SUPERFAMILY SSF51735 6 247 8.01E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 Gene3D G3DSA:3.40.50.720 2 247 1.9E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS26805 ce0fb02ae552e2ef43000241e1847022 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS07880 a9699ae1d3746dc59effbe68cd25ce89 197 Pfam PF05076 Suppressor of fused protein (SUFU) 31 194 1.8E-23 T 23-04-2016 IPR020941 Suppressor of fused-like domain NIAKO_RS32115 7178573484ece32646b0f5e541e2b1bb 361 PANTHER PTHR23289 9 346 3.0E-80 T 23-04-2016 NIAKO_RS32115 7178573484ece32646b0f5e541e2b1bb 361 Pfam PF02628 Cytochrome oxidase assembly protein 16 346 5.0E-87 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 NIAKO_RS32115 7178573484ece32646b0f5e541e2b1bb 361 Hamap MF_01665 Heme A synthase [ctaA]. 11 355 21.854 T 23-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 20 335 6.3E-108 T 23-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 Gene3D G3DSA:3.40.50.720 180 282 4.7E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 SUPERFAMILY SSF51735 148 303 5.92E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 139 1.1E-32 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 PANTHER PTHR11695:SF403 21 335 1.3E-150 T 23-04-2016 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 PANTHER PTHR11695 21 335 1.3E-150 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 Gene3D G3DSA:3.90.180.10 3 179 2.0E-59 T 23-04-2016 IPR011032 GroES-like NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 SUPERFAMILY SSF50129 306 328 1.31E-49 T 23-04-2016 IPR011032 GroES-like NIAKO_RS11335 45a677c6a3154f421a60eeaa45458f54 339 SUPERFAMILY SSF50129 3 149 1.31E-49 T 23-04-2016 IPR011032 GroES-like NIAKO_RS08350 5870dd36dcb202104bb449e34f6e24bd 188 Gene3D G3DSA:3.40.430.10 7 186 3.1E-29 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS08350 5870dd36dcb202104bb449e34f6e24bd 188 PANTHER PTHR38011 6 188 2.8E-14 T 23-04-2016 NIAKO_RS08350 5870dd36dcb202104bb449e34f6e24bd 188 SUPERFAMILY SSF53597 7 186 2.36E-31 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS08350 5870dd36dcb202104bb449e34f6e24bd 188 Pfam PF01872 RibD C-terminal domain 7 179 5.0E-15 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS25720 ac6f85a753725b965b9560fad8090c4c 244 SUPERFAMILY SSF52266 56 240 1.47E-48 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25720 ac6f85a753725b965b9560fad8090c4c 244 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 231 2.1E-26 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25720 ac6f85a753725b965b9560fad8090c4c 244 PANTHER PTHR30383 70 238 1.5E-20 T 23-04-2016 NIAKO_RS25720 ac6f85a753725b965b9560fad8090c4c 244 Gene3D G3DSA:3.40.50.1110 53 240 2.2E-48 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 Gene3D G3DSA:3.30.930.10 103 476 7.9E-112 T 23-04-2016 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PANTHER PTHR22594 195 478 4.8E-225 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PANTHER PTHR22594 5 176 4.8E-225 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PANTHER PTHR22594:SF6 195 478 4.8E-225 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PANTHER PTHR22594:SF6 5 176 4.8E-225 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 479 44.299 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PRINTS PR01042 Aspartyl-tRNA synthetase signature 220 233 8.2E-15 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PRINTS PR01042 Aspartyl-tRNA synthetase signature 394 410 8.2E-15 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 216 8.2E-15 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 PRINTS PR01042 Aspartyl-tRNA synthetase signature 434 448 8.2E-15 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 Gene3D G3DSA:2.40.50.140 5 100 6.0E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 Pfam PF00152 tRNA synthetases class II (D, K and N) 115 473 3.3E-85 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 SUPERFAMILY SSF50249 10 99 3.92E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 479 1.1E-178 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 Pfam PF01336 OB-fold nucleic acid binding domain 21 96 1.0E-6 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NIAKO_RS31575 f95ba5ee02decd0ca98ff3de8c290a7c 479 SUPERFAMILY SSF55681 113 474 4.54E-94 T 23-04-2016 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 PANTHER PTHR21235:SF15 1 237 3.3E-87 T 23-04-2016 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 Pfam PF00977 Histidine biosynthesis protein 2 229 3.6E-64 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 32.126 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 SUPERFAMILY SSF51366 1 237 1.41E-62 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 PANTHER PTHR21235 1 237 3.3E-87 T 23-04-2016 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.2E-72 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 NIAKO_RS01805 cd3ce9082b74f9cf526aae99009d11ba 237 Gene3D G3DSA:3.20.20.70 1 236 4.5E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Gene3D G3DSA:3.40.50.920 496 626 2.3E-27 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Pfam PF02780 Transketolase, C-terminal domain 499 618 3.6E-23 T 23-04-2016 IPR033248 Transketolase, C-terminal domain NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 SUPERFAMILY SSF52922 497 626 2.49E-23 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 PANTHER PTHR11624:SF2 16 636 3.9E-241 T 23-04-2016 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Pfam PF02779 Transketolase, pyrimidine binding domain 321 482 1.2E-33 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 SUPERFAMILY SSF52518 9 283 4.42E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 27 313 1.4E-52 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 SMART SM00861 322 485 9.1E-40 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 SUPERFAMILY SSF52518 308 484 1.57E-46 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Gene3D G3DSA:3.40.50.970 14 287 2.6E-93 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 Gene3D G3DSA:3.40.50.970 307 495 1.9E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS12325 9e86d21d13ddd7eda5e0d89a83ca7b95 636 PANTHER PTHR11624 16 636 3.9E-241 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PANTHER PTHR22773 1 584 7.6E-241 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 4.9E-61 T 23-04-2016 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 122 1.1E-20 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 Pfam PF00361 Proton-conducting membrane transporter 136 424 5.4E-90 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 628 1.4E-225 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 361 383 1.9E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 1.9E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 418 440 1.9E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 446 537 1.5E-6 T 23-04-2016 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal KEGG: 00624+1.6.5.- NIAKO_RS34815 5bf2b5640d9369094e79012662555b7e 635 PANTHER PTHR22773:SF50 1 584 7.6E-241 T 23-04-2016 NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 SUPERFAMILY SSF103473 22 415 9.02E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 Gene3D G3DSA:1.20.1250.20 20 209 1.7E-12 T 23-04-2016 NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 Gene3D G3DSA:1.20.1250.20 245 414 5.0E-6 T 23-04-2016 NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 PANTHER PTHR23513 2 415 9.5E-92 T 23-04-2016 NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 PANTHER PTHR23513:SF9 2 415 9.5E-92 T 23-04-2016 NIAKO_RS04625 eed1a416d169d7f19427d1caa15a1b2b 418 Pfam PF05977 Transmembrane secretion effector 12 409 2.0E-27 T 23-04-2016 IPR010290 Transmembrane secretion effector NIAKO_RS21155 a2cfc0bbb12d15b4b4c4ef1bd3dce14b 211 Gene3D G3DSA:3.40.50.180 16 199 5.5E-43 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS21155 a2cfc0bbb12d15b4b4c4ef1bd3dce14b 211 SUPERFAMILY SSF52738 16 200 6.67E-38 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS21155 a2cfc0bbb12d15b4b4c4ef1bd3dce14b 211 PANTHER PTHR24421:SF16 1 209 1.3E-22 T 23-04-2016 NIAKO_RS21155 a2cfc0bbb12d15b4b4c4ef1bd3dce14b 211 Pfam PF01339 CheB methylesterase 19 189 2.9E-41 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS21155 a2cfc0bbb12d15b4b4c4ef1bd3dce14b 211 PANTHER PTHR24421 1 209 1.3E-22 T 23-04-2016 NIAKO_RS18540 74cd911a77200872884a09539bb954d3 252 Gene3D G3DSA:3.30.1330.60 113 239 3.7E-32 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS18540 74cd911a77200872884a09539bb954d3 252 Pfam PF00691 OmpA family 134 233 1.3E-18 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS18540 74cd911a77200872884a09539bb954d3 252 SUPERFAMILY SSF103088 122 240 1.83E-30 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS18540 74cd911a77200872884a09539bb954d3 252 SUPERFAMILY SSF57997 25 107 5.43E-6 T 23-04-2016 NIAKO_RS18540 74cd911a77200872884a09539bb954d3 252 PANTHER PTHR30128 114 241 1.9E-34 T 23-04-2016 NIAKO_RS30765 6456143666d30c18d69b078063925372 191 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 44 174 6.0E-37 T 23-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 NIAKO_RS21365 5c46c07d6b6e0b1e0caa7198e9e9d8a1 401 Gene3D G3DSA:1.20.1250.20 216 398 4.0E-14 T 23-04-2016 NIAKO_RS21365 5c46c07d6b6e0b1e0caa7198e9e9d8a1 401 Gene3D G3DSA:1.20.1250.20 25 200 1.6E-27 T 23-04-2016 NIAKO_RS21365 5c46c07d6b6e0b1e0caa7198e9e9d8a1 401 SUPERFAMILY SSF103473 21 398 9.16E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS21365 5c46c07d6b6e0b1e0caa7198e9e9d8a1 401 PANTHER PTHR23517 1 399 2.2E-43 T 23-04-2016 NIAKO_RS21365 5c46c07d6b6e0b1e0caa7198e9e9d8a1 401 Pfam PF07690 Major Facilitator Superfamily 34 332 4.0E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.40.170.20 241 527 2.2E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.40.170.20 969 1031 2.2E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.40.170.20 574 605 2.2E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.40.170.20 664 910 2.2E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF49452 22 111 2.94E-12 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 PANTHER PTHR30069:SF6 662 1020 3.1E-111 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 PANTHER PTHR30069:SF6 9 635 3.1E-111 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 PANTHER PTHR30069 662 1020 3.1E-111 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 PANTHER PTHR30069 9 635 3.1E-111 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.60.40.1120 30 118 7.1E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Gene3D G3DSA:2.170.130.10 119 240 5.1E-6 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 661 762 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 790 835 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 358 521 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 863 905 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 975 1022 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 551 615 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 SUPERFAMILY SSF56935 110 313 5.95E-46 T 23-04-2016 NIAKO_RS33485 c853c435cccbb6fd994a61ba10f975ad 1075 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 110 5.6E-17 T 23-04-2016 NIAKO_RS08440 ddb8aec8a3a9a3a558afae00e86033b9 77 SUPERFAMILY SSF53720 2 73 3.67E-13 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS08440 ddb8aec8a3a9a3a558afae00e86033b9 77 Gene3D G3DSA:3.40.605.10 2 73 1.1E-12 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS08440 ddb8aec8a3a9a3a558afae00e86033b9 77 Pfam PF00171 Aldehyde dehydrogenase family 1 73 1.6E-12 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NIAKO_RS08440 ddb8aec8a3a9a3a558afae00e86033b9 77 PANTHER PTHR11699 1 73 6.4E-13 T 23-04-2016 NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 37 113 2.3E-20 T 23-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 Gene3D G3DSA:3.60.21.10 119 376 1.6E-29 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 PANTHER PTHR22953 99 314 2.1E-28 T 23-04-2016 NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 320 466 1.1E-43 T 23-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 SUPERFAMILY SSF56300 123 360 3.28E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS03500 93b0f1528d546a2b7884c92b4151189f 472 PANTHER PTHR22953:SF27 99 314 2.1E-28 T 23-04-2016 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 Pfam PF07719 Tetratricopeptide repeat 172 204 3.2E-6 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 PANTHER PTHR23083 11 205 1.7E-30 T 23-04-2016 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 PANTHER PTHR23083 367 380 1.7E-30 T 23-04-2016 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 Pfam PF13432 Tetratricopeptide repeat 9 68 2.6E-4 T 23-04-2016 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SUPERFAMILY SSF48452 67 235 1.61E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 70 103 300.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 172 205 0.0067 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 104 137 3.4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 36 69 370.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 138 171 250.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 SMART SM00028 2 35 310.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS03385 7e1dad76e52771c51652f26b6a42d554 416 Gene3D G3DSA:1.25.40.10 12 222 7.3E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 Pfam PF00625 Guanylate kinase 4 185 3.3E-44 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 1.6E-61 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 PANTHER PTHR23117:SF13 1 175 2.9E-64 T 23-04-2016 NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 Gene3D G3DSA:3.30.63.10 43 85 1.6E-21 T 23-04-2016 NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 Gene3D G3DSA:3.40.50.300 86 185 3.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 SUPERFAMILY SSF52540 3 185 1.05E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 SMART SM00072 3 187 6.6E-38 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 31.021 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 Gene3D G3DSA:3.40.50.300 3 42 6.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS32385 c922628f89e2f70cf4cfb912b0c738d6 189 PANTHER PTHR23117 1 175 2.9E-64 T 23-04-2016 NIAKO_RS34565 e300f3752820725969f7e8840d69797c 154 PANTHER PTHR31899 1 143 5.0E-29 T 23-04-2016 NIAKO_RS34565 e300f3752820725969f7e8840d69797c 154 Pfam PF04116 Fatty acid hydroxylase superfamily 11 138 9.8E-11 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS09780 92eee6fe030d6ec885cd39b1aacec332 189 PANTHER PTHR17490 12 189 3.1E-36 T 23-04-2016 NIAKO_RS09780 92eee6fe030d6ec885cd39b1aacec332 189 Pfam PF01300 Telomere recombination 13 189 4.8E-39 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 NIAKO_RS09780 92eee6fe030d6ec885cd39b1aacec332 189 Gene3D G3DSA:3.90.870.10 6 189 2.0E-47 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS09780 92eee6fe030d6ec885cd39b1aacec332 189 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 189 7.1E-39 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 NIAKO_RS09780 92eee6fe030d6ec885cd39b1aacec332 189 SUPERFAMILY SSF55821 7 188 1.65E-36 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 170 3.0E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 158 3.0E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 SMART SM00421 124 182 0.0022 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 SUPERFAMILY SSF88946 4 104 1.33E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 19 172 4.3E-44 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 Pfam PF08281 Sigma-70, region 4 119 170 1.6E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 Pfam PF04542 Sigma-70 region 2 25 90 1.4E-6 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 PANTHER PTHR30173:SF20 5 184 1.5E-37 T 23-04-2016 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 SUPERFAMILY SSF88659 108 172 6.54E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 Gene3D G3DSA:1.10.1740.10 4 107 1.1E-17 T 23-04-2016 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 PANTHER PTHR30173 5 184 1.5E-37 T 23-04-2016 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 171 1.6E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16160 a863e2798cb1d7c32a321262c489c99b 188 Gene3D G3DSA:1.10.10.10 111 173 1.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 86 2.8E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 SUPERFAMILY SSF56349 16 291 7.95E-57 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 Pfam PF00589 Phage integrase family 112 283 2.4E-46 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 PANTHER PTHR30349 9 296 3.2E-103 T 23-04-2016 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 29.033 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 296 1.0E-104 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 PANTHER PTHR30349:SF5 9 296 3.2E-103 T 23-04-2016 NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 Gene3D G3DSA:1.10.150.130 7 98 3.2E-21 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS02045 3b9badb1fe5d38e76c82e613edee7e14 300 Gene3D G3DSA:1.10.443.10 109 298 2.1E-53 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS19355 efffea0e3f9ffe1c58dd9f54b525d72c 171 Pfam PF08922 Domain of unknown function (DUF1905) 4 89 6.1E-24 T 23-04-2016 IPR015018 Protein of unknown function DUF1905 NIAKO_RS19355 efffea0e3f9ffe1c58dd9f54b525d72c 171 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 99 153 1.2E-15 T 23-04-2016 NIAKO_RS19355 efffea0e3f9ffe1c58dd9f54b525d72c 171 SUPERFAMILY SSF141694 1 91 2.28E-13 T 23-04-2016 NIAKO_RS19355 efffea0e3f9ffe1c58dd9f54b525d72c 171 Gene3D G3DSA:2.40.30.100 2 92 9.7E-19 T 23-04-2016 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 Gene3D G3DSA:3.20.20.70 2 346 6.7E-144 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 PANTHER PTHR10277:SF9 4 378 1.0E-194 T 23-04-2016 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 PANTHER PTHR10277 4 378 1.0E-194 T 23-04-2016 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 SUPERFAMILY SSF51569 3 291 1.26E-98 T 23-04-2016 NIAKO_RS00480 a0b40fc10e091b887daf690acf989777 387 Pfam PF00682 HMGL-like 5 273 1.0E-95 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NIAKO_RS23885 3db90fc7775b7bd7eb3fdd46581ffa74 137 Gene3D G3DSA:2.60.120.10 16 134 1.3E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS23885 3db90fc7775b7bd7eb3fdd46581ffa74 137 PANTHER PTHR33570:SF5 3 136 7.0E-44 T 23-04-2016 NIAKO_RS23885 3db90fc7775b7bd7eb3fdd46581ffa74 137 Pfam PF07883 Cupin domain 47 103 1.7E-10 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS23885 3db90fc7775b7bd7eb3fdd46581ffa74 137 PANTHER PTHR33570 3 136 7.0E-44 T 23-04-2016 NIAKO_RS23885 3db90fc7775b7bd7eb3fdd46581ffa74 137 SUPERFAMILY SSF51182 16 136 8.01E-30 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 PIRSF PIRSF006603 23 474 1.4E-133 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 TIGRFAM TIGR00797 matE: MATE efflux family protein 46 445 7.7E-82 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 Pfam PF01554 MatE 46 207 7.4E-32 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 Pfam PF01554 MatE 277 433 6.8E-30 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 PANTHER PTHR11206 1 473 4.3E-105 T 23-04-2016 NIAKO_RS30675 f843ae5c01b9c91cb9cfc656e67a197e 474 PANTHER PTHR11206:SF132 1 473 4.3E-105 T 23-04-2016 NIAKO_RS25265 ddb46a9b3f48c8e2ebc3ef430832d49c 266 PANTHER PTHR30373:SF2 7 266 1.1E-45 T 23-04-2016 NIAKO_RS25265 ddb46a9b3f48c8e2ebc3ef430832d49c 266 PANTHER PTHR30373 7 266 1.1E-45 T 23-04-2016 NIAKO_RS25265 ddb46a9b3f48c8e2ebc3ef430832d49c 266 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 158 2.9E-41 T 23-04-2016 IPR007621 TPM domain NIAKO_RS19065 34e1d277cb2ec2878132f535d9ef12cc 104 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 102 6.3E-17 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS19065 34e1d277cb2ec2878132f535d9ef12cc 104 PIRSF PIRSF002070 1 104 4.4E-16 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS19065 34e1d277cb2ec2878132f535d9ef12cc 104 Pfam PF00436 Single-strand binding protein family 2 100 1.8E-20 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 NIAKO_RS19065 34e1d277cb2ec2878132f535d9ef12cc 104 Gene3D G3DSA:2.40.50.140 2 103 1.5E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS19065 34e1d277cb2ec2878132f535d9ef12cc 104 SUPERFAMILY SSF50249 2 103 8.91E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24620 0021d6dc14fcda3295a74eb6aa2b72e6 181 PANTHER PTHR13256:SF22 5 179 3.7E-44 T 23-04-2016 NIAKO_RS24620 0021d6dc14fcda3295a74eb6aa2b72e6 181 PANTHER PTHR13256 5 179 3.7E-44 T 23-04-2016 NIAKO_RS24620 0021d6dc14fcda3295a74eb6aa2b72e6 181 Gene3D G3DSA:3.40.630.30 9 179 4.4E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24620 0021d6dc14fcda3295a74eb6aa2b72e6 181 SUPERFAMILY SSF55729 7 174 2.76E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24620 0021d6dc14fcda3295a74eb6aa2b72e6 181 Pfam PF13302 Acetyltransferase (GNAT) domain 16 149 1.0E-23 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS27665 77084aa7ccd2c3c8c907e3e5cc64cead 363 PIRSF PIRSF015921 3 362 1.1E-76 T 23-04-2016 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 NIAKO_RS27665 77084aa7ccd2c3c8c907e3e5cc64cead 363 PANTHER PTHR19353 13 357 3.9E-73 T 23-04-2016 NIAKO_RS27665 77084aa7ccd2c3c8c907e3e5cc64cead 363 PANTHER PTHR19353:SF14 13 357 3.9E-73 T 23-04-2016 NIAKO_RS27665 77084aa7ccd2c3c8c907e3e5cc64cead 363 Pfam PF00487 Fatty acid desaturase 63 335 1.1E-39 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS28735 c76bdfab918c7b8c5bd88e288dbc32d7 219 Pfam PF13568 Outer membrane protein beta-barrel domain 22 193 1.0E-31 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 Pfam PF14322 Starch-binding associating with outer membrane 64 209 1.6E-16 T 23-04-2016 NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 Pfam PF07980 SusD family 319 588 2.6E-45 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 Gene3D G3DSA:1.25.40.10 239 355 3.6E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 Gene3D G3DSA:1.25.40.10 421 523 3.6E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 SUPERFAMILY SSF48452 20 209 1.71E-78 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12005 019408ee84f55ae674cb59a3acd3a364 588 SUPERFAMILY SSF48452 242 588 1.71E-78 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 PANTHER PTHR30456 1 239 2.3E-110 T 23-04-2016 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 239 90.095 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 235 3.5E-92 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 Gene3D G3DSA:3.20.20.70 1 238 2.1E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 SUPERFAMILY SSF63892 1 237 1.7E-86 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 PANTHER PTHR30456:SF0 1 239 2.3E-110 T 23-04-2016 NIAKO_RS01745 95b45aaf8caa2d103c74d03f9f131206 239 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 238 2.0E-84 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 PANTHER PTHR24421:SF10 3 253 3.5E-28 T 23-04-2016 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 SMART SM00387 155 253 9.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 205 6.0E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 213 231 6.0E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 237 250 6.0E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 Pfam PF07730 Histidine kinase 56 113 3.2E-6 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 PANTHER PTHR24421 3 253 3.5E-28 T 23-04-2016 NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 Gene3D G3DSA:3.30.565.10 153 251 2.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 252 4.8E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28460 47a29bf5f53653e603cc6c2e2fb633ab 253 SUPERFAMILY SSF55874 158 251 1.07E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS18015 e031896f69a2c90f2078f27dd34be4ea 176 Pfam PF09722 Protein of unknown function (DUF2384) 126 174 1.2E-13 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 NIAKO_RS18015 e031896f69a2c90f2078f27dd34be4ea 176 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 63 176 8.6E-19 T 23-04-2016 IPR011979 Conserved hypothetical protein CHP02293 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 Pfam PF02687 FtsX-like permease family 285 400 4.0E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 Pfam PF02687 FtsX-like permease family 674 783 1.3E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 PANTHER PTHR30572 398 794 1.7E-63 T 23-04-2016 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 PANTHER PTHR30572 281 351 1.7E-63 T 23-04-2016 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 Pfam PF12704 MacB-like periplasmic core domain 431 638 5.2E-8 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 Pfam PF12704 MacB-like periplasmic core domain 20 234 1.5E-20 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 PANTHER PTHR30572:SF4 398 794 1.7E-63 T 23-04-2016 NIAKO_RS07610 29caaf67b1d56be0fff023595c867f40 794 PANTHER PTHR30572:SF4 281 351 1.7E-63 T 23-04-2016 NIAKO_RS30595 54f2daaf9e64d598ca0acb643b954814 364 Gene3D G3DSA:3.30.565.10 240 310 8.2E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30595 54f2daaf9e64d598ca0acb643b954814 364 Pfam PF06580 Histidine kinase 178 255 5.9E-25 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS30595 54f2daaf9e64d598ca0acb643b954814 364 PANTHER PTHR34220:SF1 132 362 1.9E-57 T 23-04-2016 NIAKO_RS30595 54f2daaf9e64d598ca0acb643b954814 364 SUPERFAMILY SSF55874 240 340 1.81E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS30595 54f2daaf9e64d598ca0acb643b954814 364 PANTHER PTHR34220 132 362 1.9E-57 T 23-04-2016 NIAKO_RS00360 3e8ef16f389cc185b4a82f0ec2ce18b7 178 PANTHER PTHR37302:SF2 20 171 9.3E-13 T 23-04-2016 NIAKO_RS00360 3e8ef16f389cc185b4a82f0ec2ce18b7 178 Gene3D G3DSA:1.20.120.450 19 175 1.5E-27 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS00360 3e8ef16f389cc185b4a82f0ec2ce18b7 178 Pfam PF05163 DinB family 21 171 2.7E-20 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS00360 3e8ef16f389cc185b4a82f0ec2ce18b7 178 SUPERFAMILY SSF109854 20 156 3.48E-26 T 23-04-2016 NIAKO_RS00360 3e8ef16f389cc185b4a82f0ec2ce18b7 178 PANTHER PTHR37302 20 171 9.3E-13 T 23-04-2016 NIAKO_RS00610 32435d39cce7eae649cbe4485013c1f2 135 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 79 135 3.7E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 Pfam PF00849 RNA pseudouridylate synthase 62 194 8.3E-18 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 Gene3D G3DSA:3.10.290.10 3 55 4.4E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 SUPERFAMILY SSF55120 61 229 9.59E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 Pfam PF01479 S4 domain 1 47 5.1E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 225 2.6E-46 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 PANTHER PTHR21600 3 242 1.9E-92 T 23-04-2016 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 SMART SM00363 1 61 3.0E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 SUPERFAMILY SSF55174 3 91 2.52E-16 T 23-04-2016 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NIAKO_RS34680 4c2f71072e601e13b016fc412a612f23 247 PANTHER PTHR21600:SF2 3 242 1.9E-92 T 23-04-2016 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 SMART SM00342 240 323 2.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 Gene3D G3DSA:1.10.10.60 225 277 5.7E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 Gene3D G3DSA:1.10.10.60 278 322 1.8E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 SUPERFAMILY SSF46689 277 323 4.48E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 PANTHER PTHR11019 221 322 3.7E-25 T 23-04-2016 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 PANTHER PTHR11019:SF61 221 322 3.7E-25 T 23-04-2016 NIAKO_RS06495 d65662c3355d54b5dee6a575b4b32ae5 326 Pfam PF12833 Helix-turn-helix domain 246 322 1.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 PANTHER PTHR30173 1 187 1.3E-25 T 23-04-2016 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 6.4E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 Gene3D G3DSA:1.10.1740.10 8 98 2.1E-16 T 23-04-2016 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 Pfam PF04542 Sigma-70 region 2 27 88 2.0E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 Gene3D G3DSA:1.10.10.10 122 184 8.6E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 Pfam PF08281 Sigma-70, region 4 128 179 7.0E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 SUPERFAMILY SSF88659 124 184 1.25E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS06045 4be927ecea9c38b2b2a85b34fc96579a 190 SUPERFAMILY SSF88946 8 99 4.71E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SMART SM00965 78 128 7.6E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.40.170.20 460 547 1.4E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.40.170.20 1110 1149 1.4E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.40.170.20 1012 1072 1.4E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.40.170.20 586 952 1.4E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 322 352 2.0E-15 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Pfam PF13715 CarboxypepD_reg-like domain 148 229 2.0E-11 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532:SF57 146 507 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532:SF57 742 1185 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532:SF57 670 698 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532:SF57 597 635 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.170.130.10 244 354 2.8E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Pfam PF07715 TonB-dependent Receptor Plug Domain 242 346 5.4E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF56935 226 371 2.12E-66 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF56935 1102 1184 2.12E-66 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF56935 1015 1059 2.12E-66 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF56935 452 541 2.12E-66 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF56935 579 950 2.12E-66 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Gene3D G3DSA:2.60.40.1120 148 237 3.4E-10 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 147 1187 1.3E-155 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532 146 507 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532 742 1185 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532 670 698 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 PANTHER PTHR11532 597 635 2.2E-120 T 23-04-2016 NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 SUPERFAMILY SSF49464 147 227 1.83E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS01155 73e2d3b8d500512c363fa3f186bab901 1187 Pfam PF07660 Secretin and TonB N terminus short domain 79 125 1.0E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 Gene3D G3DSA:2.60.40.1120 24 104 1.4E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF49464 22 103 3.01E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 Pfam PF13620 Carboxypeptidase regulatory-like domain 24 102 1.2E-9 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF56935 324 372 1.4E-6 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF56935 618 813 1.4E-6 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF56935 845 919 1.4E-6 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF56935 425 583 1.4E-6 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 SUPERFAMILY SSF56935 110 297 1.4E-6 T 23-04-2016 NIAKO_RS08425 d273140570890f4f533613ef21daf615 932 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 117 - T 23-04-2016 IPR010916 TonB box, conserved site NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 PANTHER PTHR10799 479 953 1.3E-180 T 23-04-2016 NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 SUPERFAMILY SSF52540 476 702 6.93E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 SMART SM00487 488 671 8.5E-38 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 Gene3D G3DSA:3.40.50.300 481 660 2.7E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 Gene3D G3DSA:3.40.50.300 781 931 4.7E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 SMART SM00490 815 899 4.1E-22 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 Pfam PF00176 SNF2 family N-terminal domain 508 774 7.2E-59 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 Pfam PF00271 Helicase conserved C-terminal domain 787 899 4.1E-20 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS17475 dcfc429b05a1d5f942c6b8f5b431edeb 954 SUPERFAMILY SSF52540 703 954 1.39E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 271 26.687 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 Gene3D G3DSA:3.40.50.150 95 267 4.8E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 SUPERFAMILY SSF53335 64 270 9.41E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 PANTHER PTHR18895 1 271 7.2E-42 T 23-04-2016 NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 57 271 8.6E-50 T 23-04-2016 NIAKO_RS12975 d23c0d6312d5588a7e5c5c1eb404f838 271 PANTHER PTHR18895:SF3 1 271 7.2E-42 T 23-04-2016 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 PANTHER PTHR10030 249 525 2.0E-67 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 PANTHER PTHR10030 3 206 2.0E-67 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 SUPERFAMILY SSF51445 252 423 1.98E-80 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 SUPERFAMILY SSF51445 38 208 1.98E-80 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 SMART SM00812 38 488 1.2E-146 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 460 538 5.1E-9 T 23-04-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 Gene3D G3DSA:3.20.20.80 35 211 1.2E-94 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 Gene3D G3DSA:3.20.20.80 255 422 1.2E-94 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 Pfam PF01120 Alpha-L-fucosidase 30 420 2.0E-96 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 Gene3D G3DSA:2.60.40.1180 453 538 1.4E-19 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS11695 01d8860fc86d2a5357dd742113116c1d 539 PIRSF PIRSF001092 18 504 1.5E-55 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS17675 92099ee82dc511164fd831f68d510afd 528 PANTHER PTHR11819 9 485 2.6E-155 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17675 92099ee82dc511164fd831f68d510afd 528 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 42 428 1.2E-72 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17675 92099ee82dc511164fd831f68d510afd 528 PANTHER PTHR11819:SF7 9 485 2.6E-155 T 23-04-2016 NIAKO_RS17675 92099ee82dc511164fd831f68d510afd 528 Pfam PF00474 Sodium:solute symporter family 43 425 1.6E-51 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS19645 b7a22143bd62efc61563d20f0de4e034 284 PANTHER PTHR40041 1 283 2.1E-31 T 23-04-2016 NIAKO_RS19645 b7a22143bd62efc61563d20f0de4e034 284 PANTHER PTHR40041:SF2 1 283 2.1E-31 T 23-04-2016 NIAKO_RS19645 b7a22143bd62efc61563d20f0de4e034 284 Pfam PF02517 CAAX protease self-immunity 180 273 3.0E-18 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 NIAKO_RS21615 d791667f8454ebfdcd2fe6ee62907dab 299 PANTHER PTHR10108:SF779 59 261 2.8E-23 T 23-04-2016 NIAKO_RS21615 d791667f8454ebfdcd2fe6ee62907dab 299 SUPERFAMILY SSF53335 106 266 1.83E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21615 d791667f8454ebfdcd2fe6ee62907dab 299 Pfam PF13489 Methyltransferase domain 89 243 1.1E-27 T 23-04-2016 NIAKO_RS21615 d791667f8454ebfdcd2fe6ee62907dab 299 Gene3D G3DSA:3.40.50.150 91 298 2.6E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21615 d791667f8454ebfdcd2fe6ee62907dab 299 PANTHER PTHR10108 59 261 2.8E-23 T 23-04-2016 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Pfam PF00754 F5/8 type C domain 581 683 3.7E-19 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Pfam PF00754 F5/8 type C domain 365 470 9.7E-12 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Gene3D G3DSA:2.60.120.260 357 485 5.4E-19 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Gene3D G3DSA:3.20.20.80 26 352 4.3E-95 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 SMART SM00812 32 401 8.8E-14 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 SUPERFAMILY SSF49785 581 695 1.28E-23 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 PANTHER PTHR10030 29 492 7.2E-198 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 SUPERFAMILY SSF51445 29 351 1.86E-90 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 508 554 7.6E-12 T 23-04-2016 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 PANTHER PTHR10030:SF28 29 492 7.2E-198 T 23-04-2016 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Pfam PF01120 Alpha-L-fucosidase 42 342 8.3E-40 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 Gene3D G3DSA:2.60.120.260 577 695 8.2E-24 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11715 e9f2c234019dee4975e2acc70800f3d4 697 SUPERFAMILY SSF49785 355 484 2.34E-19 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 PANTHER PTHR30027 1 238 2.6E-52 T 23-04-2016 NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 Gene3D G3DSA:3.40.1280.10 1 238 8.7E-63 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 236 7.8E-40 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 SUPERFAMILY SSF88697 3 71 2.06E-14 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 Pfam PF04452 RNA methyltransferase 19 236 5.2E-52 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 SUPERFAMILY SSF75217 79 236 3.72E-36 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 PIRSF PIRSF015601 2 241 3.4E-49 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NIAKO_RS27510 57b0cc93683c44ab82fa5d905b5ad709 241 PANTHER PTHR30027:SF3 1 238 2.6E-52 T 23-04-2016 NIAKO_RS08570 b8a3dbb74f61f9b768310374bcd42018 264 PANTHER PTHR10992 29 261 1.6E-22 T 23-04-2016 NIAKO_RS08570 b8a3dbb74f61f9b768310374bcd42018 264 SUPERFAMILY SSF53474 27 260 4.91E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08570 b8a3dbb74f61f9b768310374bcd42018 264 Gene3D G3DSA:3.40.50.1820 28 260 2.4E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS08570 b8a3dbb74f61f9b768310374bcd42018 264 Pfam PF12697 Alpha/beta hydrolase family 30 257 3.6E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS13715 b942f5db721d7df6a5cb7c0d4c222e1b 359 Gene3D G3DSA:3.40.390.10 220 292 9.2E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS13715 b942f5db721d7df6a5cb7c0d4c222e1b 359 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 79 356 3.3E-92 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS13715 b942f5db721d7df6a5cb7c0d4c222e1b 359 Pfam PF15890 Putative zinc-binding metallo-peptidase 95 344 6.6E-87 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS13715 b942f5db721d7df6a5cb7c0d4c222e1b 359 SUPERFAMILY SSF55486 216 292 7.06E-8 T 23-04-2016 NIAKO_RS35630 e2ac4de99da79562ba9730cc8ebdf293 374 PANTHER PTHR10361:SF28 53 361 4.9E-84 T 23-04-2016 NIAKO_RS35630 e2ac4de99da79562ba9730cc8ebdf293 374 Pfam PF01758 Sodium Bile acid symporter family 86 261 1.6E-39 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS35630 e2ac4de99da79562ba9730cc8ebdf293 374 PANTHER PTHR10361 53 361 4.9E-84 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS02905 6662a3e3cda349d19ea59d9d895943ea 149 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 140 1.3E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS02905 6662a3e3cda349d19ea59d9d895943ea 149 SUPERFAMILY SSF54593 24 142 2.82E-20 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS02905 6662a3e3cda349d19ea59d9d895943ea 149 Gene3D G3DSA:3.10.180.10 25 143 7.2E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 SUPERFAMILY SSF52540 202 383 3.47E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 14 378 3.8E-131 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 PANTHER PTHR10229:SF0 9 389 1.0E-153 T 23-04-2016 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 PANTHER PTHR10229 9 389 1.0E-153 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 Gene3D G3DSA:3.40.50.300 202 382 1.9E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 5.0E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 5.0E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 PIRSF PIRSF006809 4 393 1.4E-136 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 Pfam PF16360 GTP-binding GTPase Middle Region 120 198 2.5E-31 T 23-04-2016 IPR032305 GTP-binding protein, middle domain NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 Hamap MF_00900 GTPase HflX [hflX]. 33 387 44.528 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 Pfam PF01926 50S ribosome-binding GTPase 203 321 3.7E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 NIAKO_RS30090 36445539f714726283142db1c84cfefa 394 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 4.4E-32 T 23-04-2016 IPR025121 GTPase HflX, N-terminal NIAKO_RS18395 cad99738d7947a0ac37c76c1224cc3cc 286 SUPERFAMILY SSF141571 240 272 9.81E-18 T 23-04-2016 NIAKO_RS18395 cad99738d7947a0ac37c76c1224cc3cc 286 SUPERFAMILY SSF141571 3 49 9.81E-18 T 23-04-2016 NIAKO_RS18395 cad99738d7947a0ac37c76c1224cc3cc 286 Pfam PF00805 Pentapeptide repeats (8 copies) 9 46 1.5E-9 T 23-04-2016 IPR001646 Pentapeptide repeat NIAKO_RS18395 cad99738d7947a0ac37c76c1224cc3cc 286 Pfam PF00805 Pentapeptide repeats (8 copies) 237 264 2.4E-5 T 23-04-2016 IPR001646 Pentapeptide repeat NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 Pfam PF12770 CHAT domain 598 863 2.6E-41 T 23-04-2016 IPR024983 CHAT domain NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 212 245 7.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 354 387 250.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 174 207 9.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 256 289 31.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 92 125 44.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SMART SM00028 299 332 70.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SUPERFAMILY SSF48452 214 375 3.25E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 SUPERFAMILY SSF48452 83 245 5.18E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27655 18c5f310d5e02e19deaee49e93b60b91 909 Gene3D G3DSA:1.25.40.10 99 328 5.9E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 PANTHER PTHR33221 1 133 4.1E-42 T 23-04-2016 NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 Gene3D G3DSA:1.10.10.10 1 136 1.4E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 PANTHER PTHR33221:SF1 1 133 4.1E-42 T 23-04-2016 NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 SUPERFAMILY SSF46785 1 136 2.72E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 Pfam PF02082 Transcriptional regulator 1 82 5.3E-23 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS05605 c78d2de85e221788d119e5e42118f5d2 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 3.4E-34 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS14535 c6990a9aa55cd66596564e8599c37963 477 PANTHER PTHR22773:SF41 1 476 1.0E-141 T 23-04-2016 NIAKO_RS14535 c6990a9aa55cd66596564e8599c37963 477 PANTHER PTHR22773 1 476 1.0E-141 T 23-04-2016 NIAKO_RS14535 c6990a9aa55cd66596564e8599c37963 477 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 468 17.275 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14535 c6990a9aa55cd66596564e8599c37963 477 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 6 467 9.6E-118 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS14535 c6990a9aa55cd66596564e8599c37963 477 Pfam PF00361 Proton-conducting membrane transporter 120 413 7.0E-76 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS05350 bed1965f7589eee530b84319d35e4dad 439 Pfam PF03432 Relaxase/Mobilisation nuclease domain 8 218 4.0E-17 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 Gene3D G3DSA:3.40.630.10 29 341 1.8E-53 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 PANTHER PTHR12147:SF16 164 346 8.2E-42 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 PANTHER PTHR12147:SF16 115 140 8.2E-42 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 PANTHER PTHR12147 164 346 8.2E-42 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 PANTHER PTHR12147 115 140 8.2E-42 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 SUPERFAMILY SSF53187 30 338 1.11E-52 T 23-04-2016 NIAKO_RS28225 8a62c59f653474141814ceed0dc569b6 346 Pfam PF04389 Peptidase family M28 115 332 9.0E-43 T 23-04-2016 IPR007484 Peptidase M28 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 SMART SM00347 31 131 1.2E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 PANTHER PTHR33164 4 146 2.0E-24 T 23-04-2016 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 Pfam PF01047 MarR family 38 94 2.5E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.8E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.8E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.8E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.8E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 Gene3D G3DSA:1.10.10.10 17 145 6.8E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31955 641cb6203b08eb3d47a1ee172368f048 147 SUPERFAMILY SSF46785 18 145 3.12E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01080 2b7f6674b07b6741acf1ca92fcbf3d03 433 Pfam PF01458 Uncharacterized protein family (UPF0051) 180 403 6.1E-77 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 NIAKO_RS01080 2b7f6674b07b6741acf1ca92fcbf3d03 433 SUPERFAMILY SSF101960 17 429 1.57E-104 T 23-04-2016 NIAKO_RS01080 2b7f6674b07b6741acf1ca92fcbf3d03 433 PANTHER PTHR30508 26 431 8.5E-120 T 23-04-2016 NIAKO_RS01080 2b7f6674b07b6741acf1ca92fcbf3d03 433 PANTHER PTHR30508:SF0 26 431 8.5E-120 T 23-04-2016 NIAKO_RS01080 2b7f6674b07b6741acf1ca92fcbf3d03 433 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 144 419 2.8E-83 T 23-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 NIAKO_RS13350 60b457e951058ddb8eea0b1e4d94cba1 525 PANTHER PTHR35148 66 522 1.8E-27 T 23-04-2016 NIAKO_RS13350 60b457e951058ddb8eea0b1e4d94cba1 525 SUPERFAMILY SSF48452 18 522 3.41E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13350 60b457e951058ddb8eea0b1e4d94cba1 525 Pfam PF12771 Starch-binding associating with outer membrane 9 525 1.1E-71 T 23-04-2016 NIAKO_RS01425 fdc8712734bcc95dd9bd14663303d7a7 146 PANTHER PTHR37833 7 131 4.9E-15 T 23-04-2016 NIAKO_RS01425 fdc8712734bcc95dd9bd14663303d7a7 146 Pfam PF07610 Protein of unknown function (DUF1573) 56 99 4.3E-14 T 23-04-2016 IPR011467 Protein of unknown function DUF1573 NIAKO_RS01425 fdc8712734bcc95dd9bd14663303d7a7 146 PANTHER PTHR37833:SF1 7 131 4.9E-15 T 23-04-2016 NIAKO_RS01425 fdc8712734bcc95dd9bd14663303d7a7 146 Gene3D G3DSA:2.60.40.360 35 130 1.9E-18 T 23-04-2016 IPR008962 PapD-like NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 244 30.315 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 230 2.2E-50 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 Pfam PF01975 Survival protein SurE 3 180 3.6E-47 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 SUPERFAMILY SSF64167 1 241 3.14E-68 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 Gene3D G3DSA:3.40.1210.10 1 241 6.8E-73 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NIAKO_RS17230 2d83e8179a64ee99fcfab5657848d13e 244 PANTHER PTHR30457 1 242 6.9E-70 T 23-04-2016 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 PANTHER PTHR10992 6 103 2.7E-32 T 23-04-2016 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 PANTHER PTHR10992 130 229 2.7E-32 T 23-04-2016 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 SUPERFAMILY SSF53474 4 225 8.81E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 PANTHER PTHR10992:SF832 6 103 2.7E-32 T 23-04-2016 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 PANTHER PTHR10992:SF832 130 229 2.7E-32 T 23-04-2016 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 Pfam PF12697 Alpha/beta hydrolase family 7 220 2.6E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS04140 85b9dd3c30670828b445b0653404e4a1 232 Gene3D G3DSA:3.40.50.1820 5 229 2.1E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 SUPERFAMILY SSF52096 214 266 1.99E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 SUPERFAMILY SSF52096 354 550 1.99E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 Gene3D G3DSA:3.90.226.10 343 548 7.5E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 PANTHER PTHR32060 19 618 8.9E-78 T 23-04-2016 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 SMART SM00245 327 546 5.3E-40 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 PANTHER PTHR32060:SF11 19 618 8.9E-78 T 23-04-2016 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 Gene3D G3DSA:2.30.42.10 225 331 4.0E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 Pfam PF03572 Peptidase family S41 360 544 1.2E-41 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 SUPERFAMILY SSF50156 238 337 2.09E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 SMART SM00228 248 326 0.0093 T 23-04-2016 IPR001478 PDZ domain GO:0005515 NIAKO_RS31755 4eba6fd6e5f46e8265c73cafb8bf4ff1 692 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 556 687 4.4E-7 T 23-04-2016 IPR020992 Tail specific protease, C-terminal NIAKO_RS36160 d63f84ab817ca31d4ba9f5d1786b4d32 151 Pfam PF11412 Disulphide bond corrector protein DsbC 27 147 2.1E-12 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NIAKO_RS06175 46eceecce9729de54fca6f5df9e93701 88 Gene3D G3DSA:3.30.1130.10 42 82 4.7E-6 T 23-04-2016 NIAKO_RS06175 46eceecce9729de54fca6f5df9e93701 88 SUPERFAMILY SSF55620 41 82 4.0E-7 T 23-04-2016 NIAKO_RS06175 46eceecce9729de54fca6f5df9e93701 88 Pfam PF01227 GTP cyclohydrolase I 42 81 3.6E-6 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NIAKO_RS36225 c126ddd4846e5c2efba0e8d79e08ffd3 436 Pfam PF12698 ABC-2 family transporter protein 19 409 2.7E-54 T 23-04-2016 NIAKO_RS36225 c126ddd4846e5c2efba0e8d79e08ffd3 436 SUPERFAMILY SSF53850 49 166 4.56E-13 T 23-04-2016 NIAKO_RS36225 c126ddd4846e5c2efba0e8d79e08ffd3 436 Gene3D G3DSA:3.40.190.10 47 160 6.5E-13 T 23-04-2016 NIAKO_RS36225 c126ddd4846e5c2efba0e8d79e08ffd3 436 PANTHER PTHR41312 300 434 2.0E-44 T 23-04-2016 NIAKO_RS36225 c126ddd4846e5c2efba0e8d79e08ffd3 436 PANTHER PTHR41312 2 282 2.0E-44 T 23-04-2016 NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 PANTHER PTHR24421 76 271 4.5E-25 T 23-04-2016 NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 PANTHER PTHR24421:SF1 76 271 4.5E-25 T 23-04-2016 NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 SMART SM00387 179 269 6.2E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 Gene3D G3DSA:3.30.565.10 140 268 8.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 Pfam PF07730 Histidine kinase 77 129 1.6E-5 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 SUPERFAMILY SSF55874 166 266 1.96E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS16255 33c0990e7a2a7035fb2f5dcc1c91b987 274 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 182 234 5.1E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28010 85a66658d5181b948f64d7d3b7abbd43 242 Gene3D G3DSA:3.40.630.30 9 146 4.3E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS28010 85a66658d5181b948f64d7d3b7abbd43 242 SUPERFAMILY SSF55729 8 140 5.01E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 SUPERFAMILY SSF49472 1 112 4.06E-42 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 SMART SM00095 1 111 9.7E-6 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 Gene3D G3DSA:2.60.40.180 2 112 2.7E-42 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 PANTHER PTHR10395 1 112 7.0E-47 T 23-04-2016 NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 1 112 1.3E-44 T 23-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 23-04-2016 IPR023418 Transthyretin, thyroxine binding site NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 PRINTS PR00189 Transthyretin signature 35 60 1.0E-9 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 PRINTS PR00189 Transthyretin signature 62 91 1.0E-9 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 PRINTS PR00189 Transthyretin signature 3 23 1.0E-9 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 PANTHER PTHR10395:SF7 1 112 7.0E-47 T 23-04-2016 NIAKO_RS02145 6484527bebbd2a5eb0e421bef56fedb5 112 Pfam PF00576 HIUase/Transthyretin family 4 111 5.4E-41 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 110 4.2E-33 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 PANTHER PTHR10072 1 110 3.7E-40 T 23-04-2016 NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 Gene3D G3DSA:2.60.300.12 2 99 2.0E-27 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 105 5.1E-18 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS27750 922f93398db0800cacd774b776eb96f0 110 SUPERFAMILY SSF89360 1 98 2.75E-25 T 23-04-2016 IPR000361 FeS cluster biogenesis NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 SUPERFAMILY SSF55486 306 431 8.42E-56 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 SUPERFAMILY SSF55486 581 782 8.42E-56 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 PANTHER PTHR33478 585 812 2.5E-95 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 PANTHER PTHR33478 13 433 2.5E-95 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1200 1268 1.1E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 PRINTS PR00999 Fungalysin metallopeptidase (M36) signature 396 416 1.6E-5 T 23-04-2016 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 PRINTS PR00999 Fungalysin metallopeptidase (M36) signature 288 307 1.6E-5 T 23-04-2016 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 Gene3D G3DSA:3.50.30.30 452 578 3.6E-20 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 Pfam PF02128 Fungalysin metallopeptidase (M36) 254 784 3.2E-135 T 23-04-2016 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 SUPERFAMILY SSF52025 466 589 1.83E-7 T 23-04-2016 NIAKO_RS36520 161ddc89704e59b25ec65b923f711a50 1273 Pfam PF02225 PA domain 468 564 3.7E-13 T 23-04-2016 IPR003137 PA domain NIAKO_RS22615 0d613c2cabca125d6bf7420ec52d5813 140 SUPERFAMILY SSF55961 3 139 7.66E-30 T 23-04-2016 NIAKO_RS22615 0d613c2cabca125d6bf7420ec52d5813 140 Gene3D G3DSA:3.30.530.20 2 138 5.8E-25 T 23-04-2016 IPR023393 START-like domain NIAKO_RS22615 0d613c2cabca125d6bf7420ec52d5813 140 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 137 2.2E-20 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS22615 0d613c2cabca125d6bf7420ec52d5813 140 PANTHER PTHR36929 7 138 8.1E-20 T 23-04-2016 NIAKO_RS22615 0d613c2cabca125d6bf7420ec52d5813 140 PANTHER PTHR36929:SF1 7 138 8.1E-20 T 23-04-2016 NIAKO_RS27245 130b4bafcf9a814a85f6ea555dd2e565 123 Pfam PF13380 CoA binding domain 6 117 3.3E-22 T 23-04-2016 IPR003781 CoA-binding GO:0048037 NIAKO_RS27245 130b4bafcf9a814a85f6ea555dd2e565 123 Gene3D G3DSA:3.40.50.720 5 121 3.7E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27245 130b4bafcf9a814a85f6ea555dd2e565 123 SUPERFAMILY SSF51735 5 121 2.36E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 SUPERFAMILY SSF51735 2 221 1.26E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 7.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PANTHER PTHR24320 4 220 6.0E-50 T 23-04-2016 NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.1E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.1E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.1E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.1E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 Gene3D G3DSA:3.40.50.720 1 235 6.0E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05255 46b8bf0bfe3ef27a1c98176add51cdab 238 Pfam PF00106 short chain dehydrogenase 2 203 3.8E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 Gene3D G3DSA:3.20.20.140 75 113 4.7E-69 T 23-04-2016 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 Gene3D G3DSA:3.20.20.140 146 466 4.7E-69 T 23-04-2016 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 SUPERFAMILY SSF51556 47 470 2.45E-70 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 PANTHER PTHR11409 35 119 1.8E-122 T 23-04-2016 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 PANTHER PTHR11409 141 470 1.8E-122 T 23-04-2016 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 Pfam PF00962 Adenosine/AMP deaminase 168 457 9.3E-26 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 404 410 - T 23-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 PANTHER PTHR11409:SF39 35 119 1.8E-122 T 23-04-2016 NIAKO_RS12275 a7e59bc033f316f1979a61cfa6aa82bc 474 PANTHER PTHR11409:SF39 141 470 1.8E-122 T 23-04-2016 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Gene3D G3DSA:1.25.40.10 202 286 6.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Gene3D G3DSA:1.25.40.10 565 596 6.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Gene3D G3DSA:1.25.40.10 321 335 6.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Gene3D G3DSA:1.25.40.10 373 438 6.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 SUPERFAMILY SSF48452 20 439 3.7E-95 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 SUPERFAMILY SSF48452 580 670 3.7E-95 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Pfam PF14322 Starch-binding associating with outer membrane 93 220 3.8E-25 T 23-04-2016 NIAKO_RS14670 065de004eb9812930f070a7d75bff191 670 Pfam PF07980 SusD family 270 670 1.7E-36 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS23340 13d57fd89f4d565d7b26156f8167ef53 107 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 48 104 0.007 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS23340 13d57fd89f4d565d7b26156f8167ef53 107 SUPERFAMILY SSF47789 43 103 1.24E-9 T 23-04-2016 NIAKO_RS23340 13d57fd89f4d565d7b26156f8167ef53 107 Gene3D G3DSA:1.10.150.20 42 103 5.7E-11 T 23-04-2016 NIAKO_RS23340 13d57fd89f4d565d7b26156f8167ef53 107 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 40 102 8.5E-12 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NIAKO_RS14410 fe0fe1b1ddf197752ee6ca54e26d1116 291 Pfam PF14054 Domain of unknown function (DUF4249) 11 283 2.5E-27 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS37105 bc7c4900608ad0f8107f1dca4a1e1c41 157 Pfam PF13274 Protein of unknown function (DUF4065) 28 128 3.3E-25 T 23-04-2016 IPR025272 Domain of unknown function DUF4065 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 SMART SM00388 231 297 6.7E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 Gene3D G3DSA:3.30.565.10 304 450 1.2E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 2.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 450 2.8E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 Gene3D G3DSA:1.10.287.130 223 293 1.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 SMART SM00387 342 453 9.6E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 SUPERFAMILY SSF47384 217 295 4.51E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 PANTHER PTHR24423 210 451 4.6E-59 T 23-04-2016 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 PANTHER PTHR24423 7 19 4.6E-59 T 23-04-2016 NIAKO_RS36430 35f83c2d345ed769318922d8e1596840 464 SUPERFAMILY SSF55874 286 452 5.37E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 PIRSF PIRSF005091 81 703 1.4E-82 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 Pfam PF00884 Sulfatase 343 611 1.1E-41 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 PANTHER PTHR10342:SF236 306 632 9.0E-68 T 23-04-2016 NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 SUPERFAMILY SSF53649 340 642 6.11E-62 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 PANTHER PTHR10342 306 632 9.0E-68 T 23-04-2016 NIAKO_RS32365 45e38986943378e5bf185ed9e940a7ac 703 Gene3D G3DSA:3.40.720.10 342 629 1.7E-37 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS00805 95f99eab4b4035dbc214bacdac015327 550 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 472 550 9.4E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS00805 95f99eab4b4035dbc214bacdac015327 550 SUPERFAMILY SSF63829 294 437 6.87E-6 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PANTHER PTHR10617 1 295 1.8E-133 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 Gene3D G3DSA:2.40.30.10 183 275 1.7E-23 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 SUPERFAMILY SSF160996 183 346 5.75E-42 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PANTHER PTHR10617:SF103 1 295 1.8E-133 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 SUPERFAMILY SSF51905 2 191 8.57E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 SUPERFAMILY SSF51905 343 401 8.57E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PANTHER PTHR10617:SF103 336 402 1.8E-133 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 2 398 1.6E-136 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 20 1.7E-6 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 1.7E-6 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 PANTHER PTHR10617 336 402 1.8E-133 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 Pfam PF03486 HI0933-like protein 2 398 5.3E-124 T 23-04-2016 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 Gene3D G3DSA:3.50.50.60 2 182 7.5E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS22890 95270972375d4f1ebe1373664ed2bc5b 407 Gene3D G3DSA:3.50.50.60 345 401 7.5E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 PANTHER PTHR30273:SF2 189 413 1.5E-49 T 23-04-2016 NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 PANTHER PTHR30273:SF2 5 119 1.5E-49 T 23-04-2016 NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 PANTHER PTHR30273 189 413 1.5E-49 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 PANTHER PTHR30273 5 119 1.5E-49 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 Pfam PF16344 Domain of unknown function (DUF4974) 314 411 1.1E-16 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS02115 1e383c18a93917a8d71b51a210d3d2df 415 Pfam PF04773 FecR protein 187 297 2.4E-9 T 23-04-2016 IPR006860 FecR protein NIAKO_RS00415 b62a3049d2eb8402311537b07e8a8f7b 365 PANTHER PTHR12526 87 363 1.8E-38 T 23-04-2016 NIAKO_RS00415 b62a3049d2eb8402311537b07e8a8f7b 365 Pfam PF00534 Glycosyl transferases group 1 177 341 2.5E-29 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS00415 b62a3049d2eb8402311537b07e8a8f7b 365 Gene3D G3DSA:3.40.50.2000 171 341 2.5E-23 T 23-04-2016 NIAKO_RS00415 b62a3049d2eb8402311537b07e8a8f7b 365 SUPERFAMILY SSF53756 49 359 1.62E-51 T 23-04-2016 NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 21 375 1.4E-137 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 SUPERFAMILY SSF54593 16 362 8.86E-91 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 PANTHER PTHR11959 14 375 1.8E-168 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 Gene3D G3DSA:3.10.180.10 13 180 2.1E-43 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 Gene3D G3DSA:3.10.180.10 181 375 5.7E-82 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 PIRSF PIRSF009283 8 375 2.8E-137 T 23-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 19 152 7.2E-9 T 23-04-2016 NIAKO_RS12640 c30661e23540b701dc7ecb453d555952 375 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 180 329 3.9E-15 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 PANTHER PTHR11487:SF0 1 218 5.9E-44 T 23-04-2016 NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 Gene3D G3DSA:3.40.50.1820 163 228 1.9E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 Gene3D G3DSA:3.40.50.1820 3 109 1.9E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 SUPERFAMILY SSF53474 3 223 5.21E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 Pfam PF00975 Thioesterase domain 5 222 3.7E-28 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 NIAKO_RS11505 8c59e0412e761f0db7221f77319a0d1a 236 PANTHER PTHR11487 1 218 5.9E-44 T 23-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Gene3D G3DSA:2.60.120.260 306 448 1.6E-32 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Pfam PF00754 F5/8 type C domain 323 437 2.3E-24 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SMART SM00636 26 285 9.2E-51 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 604 673 3.0E-13 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Gene3D G3DSA:2.60.120.260 457 578 1.9E-36 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 ProSitePatterns PS01095 Chitinases family 18 active site. 127 135 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 PANTHER PTHR11177 8 316 2.1E-38 T 23-04-2016 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Pfam PF00704 Glycosyl hydrolases family 18 27 285 2.4E-46 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SUPERFAMILY SSF49785 455 578 8.4E-35 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Gene3D G3DSA:3.20.20.80 24 300 4.5E-63 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 Pfam PF03422 Carbohydrate binding module (family 6) 458 577 5.9E-31 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SUPERFAMILY SSF51445 25 237 2.36E-60 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SUPERFAMILY SSF51445 266 314 2.36E-60 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SUPERFAMILY SSF49785 309 444 4.82E-30 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS36355 3d0cfb94d83b7dd6aa6663f6ac26d398 673 SMART SM00606 450 578 1.5E-38 T 23-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 SUPERFAMILY SSF82714 309 392 1.83E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 PANTHER PTHR32063:SF19 21 645 6.1E-280 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 Gene3D G3DSA:3.30.2090.10 310 392 1.1E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 Gene3D G3DSA:1.10.3850.10 22 93 3.0E-17 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 Gene3D G3DSA:1.10.3850.10 400 626 1.9E-45 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 PANTHER PTHR32063 21 645 6.1E-280 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 SUPERFAMILY SSF82866 22 91 2.22E-11 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 SUPERFAMILY SSF82866 393 627 1.44E-41 T 23-04-2016 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 Pfam PF00873 AcrB/AcrD/AcrF family 22 626 4.8E-122 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 PRINTS PR00702 Acriflavin resistance protein family signature 39 62 3.8E-6 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 PRINTS PR00702 Acriflavin resistance protein family signature 64 87 3.8E-6 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS30575 2958ed4ff3031e7d7b8f7006ca16aa18 645 PRINTS PR00702 Acriflavin resistance protein family signature 138 155 3.8E-6 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 Pfam PF00230 Major intrinsic protein 2 204 1.9E-48 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 ProSitePatterns PS00221 MIP family signature. 60 68 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 SUPERFAMILY SSF81338 3 216 2.75E-61 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PANTHER PTHR19139 1 201 6.6E-78 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 Gene3D G3DSA:1.20.1080.10 2 217 7.4E-60 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PANTHER PTHR19139:SF144 1 201 6.6E-78 T 23-04-2016 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 123 141 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 154 176 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 3 22 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS20040 474c1040dc272f26d988ea6376d9e0c5 219 PRINTS PR00783 Major intrinsic protein family signature 191 211 1.9E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NIAKO_RS12470 733b1701436f8a464cb05eddc535afe2 233 PIRSF PIRSF028451 7 228 6.8E-58 T 23-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 NIAKO_RS12470 733b1701436f8a464cb05eddc535afe2 233 PANTHER PTHR36452 16 233 5.9E-35 T 23-04-2016 NIAKO_RS12470 733b1701436f8a464cb05eddc535afe2 233 Pfam PF09365 Conserved hypothetical protein (DUF2461) 16 219 2.3E-67 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 NIAKO_RS12470 733b1701436f8a464cb05eddc535afe2 233 PANTHER PTHR36452:SF1 16 233 5.9E-35 T 23-04-2016 NIAKO_RS12470 733b1701436f8a464cb05eddc535afe2 233 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 13 224 2.3E-57 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 Hamap MF_00300 Chorismate synthase [aroC]. 8 329 31.234 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 PANTHER PTHR21085 1 332 6.1E-132 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 Gene3D G3DSA:3.60.150.10 163 326 4.7E-57 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 Gene3D G3DSA:3.60.150.10 7 162 1.9E-51 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 SUPERFAMILY SSF103263 1 329 4.58E-105 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 ProSitePatterns PS00788 Chorismate synthase signature 2. 123 139 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS22090 957acffe84649f1b75c9829d0b74a627 340 Pfam PF01264 Chorismate synthase 8 322 1.9E-106 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NIAKO_RS26175 a12b36441eb8729293bbd151a385c642 151 Pfam PF13523 Acetyltransferase (GNAT) domain 9 129 1.1E-8 T 23-04-2016 NIAKO_RS26175 a12b36441eb8729293bbd151a385c642 151 Gene3D G3DSA:3.40.630.30 27 148 3.7E-11 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS26175 a12b36441eb8729293bbd151a385c642 151 SUPERFAMILY SSF55729 17 146 1.05E-6 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS36995 089cc6b400d15feb0b8f2c2e3eb76e44 457 Pfam PF15890 Putative zinc-binding metallo-peptidase 40 272 1.1E-72 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS36995 089cc6b400d15feb0b8f2c2e3eb76e44 457 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 31 280 3.9E-80 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 205 5.2E-22 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 200 5.4E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 Gene3D G3DSA:1.10.150.240 17 101 3.6E-10 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 PANTHER PTHR12725 1 231 4.9E-39 T 23-04-2016 NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 SUPERFAMILY SSF56784 2 231 4.99E-42 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 PANTHER PTHR12725:SF57 1 231 4.9E-39 T 23-04-2016 NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 231 1.2E-59 T 23-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 Gene3D G3DSA:3.40.50.1000 104 227 1.9E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS32580 b7d05ee3541b6c0246e39288b6bb1d2f 231 Gene3D G3DSA:3.40.50.1000 1 16 1.9E-35 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS26360 9b00bcde3be0cb8abe4ddb502c7b4d8a 275 Pfam PF01694 Rhomboid family 45 182 7.9E-25 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS26360 9b00bcde3be0cb8abe4ddb502c7b4d8a 275 SUPERFAMILY SSF144091 9 184 1.16E-29 T 23-04-2016 NIAKO_RS26360 9b00bcde3be0cb8abe4ddb502c7b4d8a 275 PANTHER PTHR22936 49 209 2.6E-24 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS26360 9b00bcde3be0cb8abe4ddb502c7b4d8a 275 Gene3D G3DSA:1.20.1540.10 11 184 1.8E-29 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS02720 0956a3656d99cd8bd3f1532cb4ac6208 77 Gene3D G3DSA:3.10.20.30 1 77 4.1E-12 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS02720 0956a3656d99cd8bd3f1532cb4ac6208 77 SUPERFAMILY SSF54285 3 77 8.04E-12 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NIAKO_RS02720 0956a3656d99cd8bd3f1532cb4ac6208 77 Pfam PF02597 ThiS family 5 77 2.7E-9 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NIAKO_RS04065 761ebef008a711b5f1bef40fa78382d7 490 SUPERFAMILY SSF48452 21 490 2.28E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04065 761ebef008a711b5f1bef40fa78382d7 490 PANTHER PTHR35148 2 489 2.9E-36 T 23-04-2016 NIAKO_RS04065 761ebef008a711b5f1bef40fa78382d7 490 Pfam PF12771 Starch-binding associating with outer membrane 12 490 2.4E-63 T 23-04-2016 NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 Pfam PF03965 Penicillinase repressor 4 116 8.1E-26 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 Gene3D G3DSA:1.10.10.10 1 77 2.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 PANTHER PTHR34134 1 117 4.4E-27 T 23-04-2016 NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 PIRSF PIRSF019455 1 121 3.2E-22 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 SUPERFAMILY SSF46785 1 117 2.11E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01515 8a7976afbe469cf7b56750fb4e6f150e 121 PANTHER PTHR34134:SF1 1 117 4.4E-27 T 23-04-2016 NIAKO_RS05690 2f84fbfbf51ed8f77591abbe361049b0 159 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 103 118 - T 23-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 13 321 3.3E-79 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 Pfam PF02911 Formyl transferase, C-terminal domain 223 321 6.6E-23 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 SUPERFAMILY SSF50486 226 318 1.38E-21 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 12 322 33.057 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 PANTHER PTHR11138 13 322 9.9E-101 T 23-04-2016 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 SUPERFAMILY SSF53328 13 207 4.45E-59 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 Pfam PF00551 Formyl transferase 13 189 1.8E-37 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 Gene3D G3DSA:3.40.50.170 13 209 1.8E-64 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS22480 0543ed4c8c8bd0dc788ea3df3961531b 322 Gene3D G3DSA:3.10.25.10 227 321 4.7E-26 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Gene3D G3DSA:3.50.50.60 266 421 1.9E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 35 114 1.2E-18 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 146 6.2E-19 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 361 6.2E-19 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 273 6.2E-19 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 395 6.2E-19 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 SUPERFAMILY SSF51971 123 354 9.42E-51 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 408 8.1E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Gene3D G3DSA:3.40.50.720 128 265 1.4E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 383 401 2.3E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 148 2.3E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 251 275 2.3E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Gene3D G3DSA:1.10.1060.10 35 127 1.2E-28 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 Gene3D G3DSA:1.10.1060.10 450 537 3.3E-13 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PANTHER PTHR11938:SF99 64 419 1.5E-75 T 23-04-2016 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 SUPERFAMILY SSF46548 35 135 5.23E-24 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 SUPERFAMILY SSF46548 410 536 2.14E-16 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NIAKO_RS06190 ad5803e63bf1e659bb44b24c1582b5c5 540 PANTHER PTHR11938 64 419 1.5E-75 T 23-04-2016 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 Pfam PF00027 Cyclic nucleotide-binding domain 15 102 7.5E-20 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 SUPERFAMILY SSF46785 132 201 3.35E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 SUPERFAMILY SSF51206 5 128 5.76E-30 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 PANTHER PTHR24567 7 196 8.3E-36 T 23-04-2016 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 SMART SM00100 1 114 3.7E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 173 188 4.7E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 157 173 4.7E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 Pfam PF13545 Crp-like helix-turn-helix domain 135 189 2.8E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 SMART SM00419 151 199 0.0041 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 Gene3D G3DSA:2.60.120.10 13 121 9.7E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS25985 252c140ac229f7eb86569522a286f277 202 Gene3D G3DSA:1.10.10.10 133 196 3.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16650 6e02acf4351b34cb30ed87d6aa299a73 329 Pfam PF01610 Transposase 58 323 3.5E-63 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain NIAKO_RS16650 6e02acf4351b34cb30ed87d6aa299a73 329 PANTHER PTHR33498 58 320 1.4E-16 T 23-04-2016 NIAKO_RS16650 6e02acf4351b34cb30ed87d6aa299a73 329 PANTHER PTHR33498:SF1 58 320 1.4E-16 T 23-04-2016 NIAKO_RS25250 b06a0cbee6ff8c0647f655dcd096092f 600 Pfam PF14771 Domain of unknown function (DUF4476) 509 595 5.7E-6 T 23-04-2016 IPR028011 Domain of unknown function DUF4476 NIAKO_RS07895 f59e2e93d128cb49fa32e6ac6f7e1539 169 Pfam PF01661 Macro domain 18 134 7.9E-48 T 23-04-2016 IPR002589 Macro domain NIAKO_RS07895 f59e2e93d128cb49fa32e6ac6f7e1539 169 SUPERFAMILY SSF52949 1 168 1.68E-70 T 23-04-2016 NIAKO_RS07895 f59e2e93d128cb49fa32e6ac6f7e1539 169 PANTHER PTHR11106 2 168 3.7E-89 T 23-04-2016 NIAKO_RS07895 f59e2e93d128cb49fa32e6ac6f7e1539 169 Gene3D G3DSA:3.40.220.10 2 167 3.2E-73 T 23-04-2016 NIAKO_RS07895 f59e2e93d128cb49fa32e6ac6f7e1539 169 SMART SM00506 1 134 9.1E-57 T 23-04-2016 IPR002589 Macro domain NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 2 141 1.1E-38 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 101 138 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 144 33.634 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 Gene3D G3DSA:3.30.420.10 1 147 9.7E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 SUPERFAMILY SSF53098 1 146 3.34E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 PANTHER PTHR30194 1 160 6.0E-47 T 23-04-2016 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 2 143 3.6E-37 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 49 65 5.6E-15 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 95 114 5.6E-15 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS34125 371fbe68f5f241adb58947498b24ebe7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 71 87 5.6E-15 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 PANTHER PTHR11091 5 336 1.1E-104 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 Pfam PF02615 Malate/L-lactate dehydrogenase 9 333 1.4E-102 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 PANTHER PTHR11091:SF3 5 336 1.1E-104 T 23-04-2016 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 Gene3D G3DSA:1.10.1530.10 8 76 4.5E-24 T 23-04-2016 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 SUPERFAMILY SSF89733 6 336 1.7E-86 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS17955 a7433119d645b4b02983bda288578075 338 Gene3D G3DSA:3.30.1370.60 77 273 7.8E-63 T 23-04-2016 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 PANTHER PTHR26402 1 116 9.3E-19 T 23-04-2016 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 Pfam PF00072 Response regulator receiver domain 4 111 2.4E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 Gene3D G3DSA:2.40.50.40 144 213 4.5E-13 T 23-04-2016 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 Pfam PF04397 LytTr DNA-binding domain 155 252 1.0E-16 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 SMART SM00448 1 111 2.3E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 SMART SM00850 153 253 1.6E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 Gene3D G3DSA:3.40.50.2300 1 119 4.2E-19 T 23-04-2016 NIAKO_RS31000 41898bee82f549c1c19cfa2d9e577110 254 SUPERFAMILY SSF52172 2 130 1.25E-19 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30160 b26036b9ed753e9594a39d351b41ff16 300 Pfam PF08401 Domain of unknown function (DUF1738) 15 118 1.1E-30 T 23-04-2016 IPR013610 Domain of unknown function DUF1738 NIAKO_RS30160 b26036b9ed753e9594a39d351b41ff16 300 PIRSF PIRSF037112 2 300 1.0E-88 T 23-04-2016 IPR017113 Antirestriction, ArdC NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 Pfam PF16344 Domain of unknown function (DUF4974) 311 410 1.8E-19 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 Pfam PF04773 FecR protein 207 300 1.6E-12 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 PANTHER PTHR30273 31 142 5.9E-53 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 PANTHER PTHR30273 209 417 5.9E-53 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 PANTHER PTHR30273:SF2 31 142 5.9E-53 T 23-04-2016 NIAKO_RS16530 90a88f1e680bef5da3bb4e1182342189 421 PANTHER PTHR30273:SF2 209 417 5.9E-53 T 23-04-2016 NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 Pfam PF13229 Right handed beta helix region 376 503 2.1E-6 T 23-04-2016 NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 SUPERFAMILY SSF51126 376 552 2.03E-28 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 SUPERFAMILY SSF51126 13 121 2.03E-28 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 SUPERFAMILY SSF51126 313 331 2.03E-28 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 Gene3D G3DSA:2.160.20.10 375 602 4.5E-19 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 Gene3D G3DSA:2.160.20.10 14 155 4.5E-19 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 PANTHER PTHR36453:SF1 377 606 1.0E-121 T 23-04-2016 NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 PANTHER PTHR36453:SF1 24 359 1.0E-121 T 23-04-2016 NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 PANTHER PTHR36453 377 606 1.0E-121 T 23-04-2016 NIAKO_RS17685 35cd00766b154d74de41012a4c85daa4 627 PANTHER PTHR36453 24 359 1.0E-121 T 23-04-2016 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 SUPERFAMILY SSF51445 150 506 4.63E-136 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 Gene3D G3DSA:3.20.20.80 148 521 2.7E-149 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PANTHER PTHR22600 6 210 8.1E-239 T 23-04-2016 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PANTHER PTHR22600 227 523 8.1E-239 T 23-04-2016 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 SUPERFAMILY SSF55545 9 149 2.75E-24 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 475 492 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 108 128 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 244 261 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 457 473 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 144 161 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 173 194 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 314 327 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 310 2.9E-48 T 23-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 Gene3D G3DSA:3.30.379.10 6 147 5.8E-29 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PANTHER PTHR22600:SF21 6 210 8.1E-239 T 23-04-2016 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 PANTHER PTHR22600:SF21 227 523 8.1E-239 T 23-04-2016 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 20 147 2.6E-21 T 23-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS19425 fb3646545c5c5b72d574eeb8f57b5e84 525 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 150 493 1.5E-129 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 Gene3D G3DSA:2.60.40.1120 117 186 2.4E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 SUPERFAMILY SSF49464 117 190 7.46E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 233 314 2.2E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 PANTHER PTHR11532 113 217 4.6E-14 T 23-04-2016 NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 Pfam PF13715 CarboxypepD_reg-like domain 117 196 1.0E-14 T 23-04-2016 NIAKO_RS02040 59ceb9a3b4adae36f73c63abf7c85b24 315 PANTHER PTHR11532:SF57 113 217 4.6E-14 T 23-04-2016 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 SMART SM00479 1 166 6.5E-45 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 176 1.6E-28 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 Pfam PF00929 Exonuclease 4 157 1.4E-29 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 SUPERFAMILY SSF53098 1 171 6.38E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 PANTHER PTHR30231:SF8 2 157 1.1E-41 T 23-04-2016 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 SUPERFAMILY SSF82771 198 274 9.81E-17 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 SMART SM00465 197 278 1.9E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 Gene3D G3DSA:3.30.420.10 2 167 1.9E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 PANTHER PTHR30231 2 157 1.1E-41 T 23-04-2016 NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 Gene3D G3DSA:3.40.1440.10 198 245 2.0E-7 T 23-04-2016 IPR027299 GIY-YIG domain NIAKO_RS14720 19fa2654a133d9e761033df587f8b183 455 Pfam PF01541 GIY-YIG catalytic domain 199 262 2.7E-8 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily NIAKO_RS17980 f59975fb5c915a0926aade9f72a21460 447 Gene3D G3DSA:1.50.10.10 41 431 4.2E-100 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS17980 f59975fb5c915a0926aade9f72a21460 447 Pfam PF07470 Glycosyl Hydrolase Family 88 64 430 4.1E-96 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS17980 f59975fb5c915a0926aade9f72a21460 447 SUPERFAMILY SSF48208 90 432 2.38E-56 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17980 f59975fb5c915a0926aade9f72a21460 447 PANTHER PTHR33886 43 446 2.8E-110 T 23-04-2016 NIAKO_RS17980 f59975fb5c915a0926aade9f72a21460 447 PANTHER PTHR33886:SF2 43 446 2.8E-110 T 23-04-2016 NIAKO_RS11365 506faece071ec0059c35772308fd1347 373 PANTHER PTHR30294 1 371 1.4E-92 T 23-04-2016 NIAKO_RS11365 506faece071ec0059c35772308fd1347 373 PANTHER PTHR30294:SF12 1 371 1.4E-92 T 23-04-2016 NIAKO_RS11365 506faece071ec0059c35772308fd1347 373 Pfam PF12698 ABC-2 family transporter protein 24 362 1.1E-46 T 23-04-2016 NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 PANTHER PTHR11516:SF25 2 328 2.6E-137 T 23-04-2016 NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 Gene3D G3DSA:3.40.50.970 8 330 7.9E-123 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 Pfam PF00676 Dehydrogenase E1 component 24 315 1.9E-82 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 16 328 3.8E-132 T 23-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 SUPERFAMILY SSF52518 8 330 1.79E-95 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS11300 1fa204081fcfb696ed33b2ebd0097572 332 PANTHER PTHR11516 2 328 2.6E-137 T 23-04-2016 NIAKO_RS15250 b960cbde07992d3473688a29e575539e 508 Gene3D G3DSA:1.20.1250.20 15 198 8.6E-11 T 23-04-2016 NIAKO_RS15250 b960cbde07992d3473688a29e575539e 508 SUPERFAMILY SSF103473 255 423 3.27E-15 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS15250 b960cbde07992d3473688a29e575539e 508 SUPERFAMILY SSF103473 469 493 3.27E-15 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS15250 b960cbde07992d3473688a29e575539e 508 SUPERFAMILY SSF103473 14 200 3.27E-15 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS15250 b960cbde07992d3473688a29e575539e 508 Pfam PF07690 Major Facilitator Superfamily 21 411 7.7E-12 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS25900 bfabf28a48989be59c91598a0ad55713 157 SUPERFAMILY SSF54637 14 154 1.2E-16 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS25900 bfabf28a48989be59c91598a0ad55713 157 Pfam PF14539 Domain of unknown function (DUF4442) 24 151 3.9E-11 T 23-04-2016 IPR027961 Protein of unknown function DUF4442 NIAKO_RS25900 bfabf28a48989be59c91598a0ad55713 157 Gene3D G3DSA:3.10.129.10 13 154 3.3E-23 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS07530 02ff9cb9a24a75b3a7b4e6459c6a1226 334 Gene3D G3DSA:3.40.50.1110 119 132 4.9E-4 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07530 02ff9cb9a24a75b3a7b4e6459c6a1226 334 Gene3D G3DSA:3.40.50.1110 165 271 4.9E-4 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07530 02ff9cb9a24a75b3a7b4e6459c6a1226 334 SUPERFAMILY SSF52266 164 269 9.16E-7 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS07530 02ff9cb9a24a75b3a7b4e6459c6a1226 334 Pfam PF08885 GSCFA family 22 267 1.0E-83 T 23-04-2016 IPR014982 GSCFA NIAKO_RS31145 01f1b592e0497bd32988bfc717fe3b06 244 Pfam PF01569 PAP2 superfamily 95 220 1.1E-15 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS31145 01f1b592e0497bd32988bfc717fe3b06 244 SUPERFAMILY SSF48317 70 220 9.55E-16 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS31145 01f1b592e0497bd32988bfc717fe3b06 244 Gene3D G3DSA:1.20.144.10 75 219 2.3E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 Gene3D G3DSA:3.40.50.720 2 262 3.5E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PANTHER PTHR24322 161 192 1.3E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PANTHER PTHR24322 11 145 1.3E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 SUPERFAMILY SSF51735 5 262 1.91E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 1.9E-32 T 23-04-2016 NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS19095 d1e0c6c65b7d5eb72236422f3fb77dfa 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS24170 05627e8ce0a70a170132477ddf0321c0 518 Pfam PF07980 SusD family 279 515 3.6E-28 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS24170 05627e8ce0a70a170132477ddf0321c0 518 Gene3D G3DSA:1.25.40.10 211 450 2.3E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24170 05627e8ce0a70a170132477ddf0321c0 518 SUPERFAMILY SSF48452 22 515 4.43E-106 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24170 05627e8ce0a70a170132477ddf0321c0 518 Pfam PF14322 Starch-binding associating with outer membrane 91 230 1.3E-24 T 23-04-2016 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 297 8.6E-51 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 203 225 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 SUPERFAMILY SSF52283 11 140 3.78E-45 T 23-04-2016 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 SUPERFAMILY SSF55021 337 411 1.76E-16 T 23-04-2016 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 Gene3D G3DSA:3.40.50.720 11 122 6.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 PANTHER PTHR10996:SF18 5 372 4.2E-187 T 23-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 PANTHER PTHR10996 5 372 4.2E-187 T 23-04-2016 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 Gene3D G3DSA:3.30.70.260 331 411 6.3E-21 T 23-04-2016 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 323 2.3E-36 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 SUPERFAMILY SSF51735 111 298 3.65E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS08910 96d9c74c33e2c4c0966927ccdcdcdecc 412 Gene3D G3DSA:3.40.50.720 123 300 3.8E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 SMART SM00487 364 545 2.0E-22 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 SUPERFAMILY SSF52540 274 527 1.71E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 Gene3D G3DSA:3.40.50.300 353 527 1.3E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 PANTHER PTHR11274 368 528 2.9E-36 T 23-04-2016 NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 Pfam PF00271 Helicase conserved C-terminal domain 580 684 4.5E-9 T 23-04-2016 IPR001650 Helicase, C-terminal NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 Pfam PF04851 Type III restriction enzyme, res subunit 367 509 1.2E-23 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 SUPERFAMILY SSF52540 573 684 1.36E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 SUPERFAMILY SSF52540 470 529 1.36E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22830 03197eb65456932281dbfa62d1ef9ed3 1125 Gene3D G3DSA:3.40.50.300 568 709 1.3E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS01680 d6585efd08c1d6d94ce97b3610942c8a 361 Pfam PF01435 Peptidase family M48 182 337 9.8E-32 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NIAKO_RS01680 d6585efd08c1d6d94ce97b3610942c8a 361 Gene3D G3DSA:3.30.2010.10 165 239 3.6E-17 T 23-04-2016 NIAKO_RS01680 d6585efd08c1d6d94ce97b3610942c8a 361 PANTHER PTHR22726 108 345 3.7E-48 T 23-04-2016 NIAKO_RS31330 8a69c415ad126b3cd6792a962691a423 143 PANTHER PTHR26402 6 135 7.8E-19 T 23-04-2016 NIAKO_RS31330 8a69c415ad126b3cd6792a962691a423 143 Gene3D G3DSA:3.40.50.2300 3 139 2.3E-24 T 23-04-2016 NIAKO_RS31330 8a69c415ad126b3cd6792a962691a423 143 SUPERFAMILY SSF52172 6 138 7.54E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS31330 8a69c415ad126b3cd6792a962691a423 143 Pfam PF00072 Response regulator receiver domain 8 135 7.3E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS31330 8a69c415ad126b3cd6792a962691a423 143 SMART SM00448 6 135 5.1E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS32100 cf5b160c797d580248b512225fc99ed7 231 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 8.0E-6 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS32100 cf5b160c797d580248b512225fc99ed7 231 Gene3D G3DSA:3.40.1260.10 159 227 4.0E-4 T 23-04-2016 IPR027396 DsrEFH-like NIAKO_RS20025 27b281f72079960ff1a15c28a8aee1c7 161 Pfam PF04397 LytTr DNA-binding domain 68 158 2.7E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20025 27b281f72079960ff1a15c28a8aee1c7 161 SUPERFAMILY SSF52172 1 52 1.32E-8 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20025 27b281f72079960ff1a15c28a8aee1c7 161 SMART SM00850 66 159 5.0E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS20025 27b281f72079960ff1a15c28a8aee1c7 161 Gene3D G3DSA:3.40.50.2300 1 48 8.9E-7 T 23-04-2016 NIAKO_RS20025 27b281f72079960ff1a15c28a8aee1c7 161 Gene3D G3DSA:2.40.50.40 58 126 9.7E-17 T 23-04-2016 NIAKO_RS30680 2f251ffbadc8939abb485d45b7d08ee5 345 PANTHER PTHR21716:SF13 1 334 3.0E-51 T 23-04-2016 NIAKO_RS30680 2f251ffbadc8939abb485d45b7d08ee5 345 PANTHER PTHR21716 1 334 3.0E-51 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS30680 2f251ffbadc8939abb485d45b7d08ee5 345 Pfam PF01594 Domain of unknown function DUF20 15 330 3.8E-39 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 Pfam PF03825 Nucleoside H+ symporter 7 401 1.8E-109 T 23-04-2016 NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 Gene3D G3DSA:1.20.1250.20 199 404 6.2E-22 T 23-04-2016 NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 Gene3D G3DSA:1.20.1250.20 8 185 4.0E-13 T 23-04-2016 NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 PANTHER PTHR23522 1 399 4.0E-124 T 23-04-2016 NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 SUPERFAMILY SSF103473 7 403 7.98E-39 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS10855 a6953e6fa2243c38d326f01c5a4920a7 410 PANTHER PTHR23522:SF1 1 399 4.0E-124 T 23-04-2016 NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 SUPERFAMILY SSF101874 24 176 2.09E-42 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 PANTHER PTHR34406:SF1 8 172 1.4E-26 T 23-04-2016 NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 Pfam PF04264 YceI-like domain 36 172 2.4E-35 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 PANTHER PTHR34406 8 172 1.4E-26 T 23-04-2016 NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 SMART SM00867 25 175 1.0E-41 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS35650 8e115a183856c2fcd0303c28370b8ae7 177 Gene3D G3DSA:2.40.128.110 39 176 3.1E-42 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS15020 12570df2bac565b6ed3a9bcf507b3528 496 Gene3D G3DSA:2.40.160.20 343 432 3.9E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS13070 8524de1a282facc4155a54141a8c14b1 524 Gene3D G3DSA:1.25.40.10 206 319 1.0E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13070 8524de1a282facc4155a54141a8c14b1 524 Gene3D G3DSA:1.25.40.10 356 451 1.0E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13070 8524de1a282facc4155a54141a8c14b1 524 Pfam PF14322 Starch-binding associating with outer membrane 28 225 6.8E-27 T 23-04-2016 NIAKO_RS13070 8524de1a282facc4155a54141a8c14b1 524 SUPERFAMILY SSF48452 23 516 3.29E-99 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13070 8524de1a282facc4155a54141a8c14b1 524 Pfam PF07980 SusD family 267 516 8.3E-29 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS32340 73ff490c99de923431fbf6f5d3df988f 213 Pfam PF11138 Protein of unknown function (DUF2911) 83 211 1.1E-43 T 23-04-2016 IPR021314 Protein of unknown function DUF2911 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 Pfam PF03471 Transporter associated domain 350 426 1.1E-18 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 Pfam PF00571 CBS domain 286 333 1.8E-6 T 23-04-2016 IPR000644 CBS domain NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 Pfam PF01595 Domain of unknown function DUF21 13 196 4.6E-22 T 23-04-2016 IPR002550 Domain of unknown function DUF21 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 Gene3D G3DSA:3.10.580.10 207 342 4.1E-14 T 23-04-2016 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 SUPERFAMILY SSF56176 350 425 8.18E-19 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 Gene3D G3DSA:3.30.465.10 343 426 6.0E-20 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 PANTHER PTHR22777 7 427 6.5E-70 T 23-04-2016 NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 SMART SM01091 349 427 1.9E-21 T 23-04-2016 IPR005170 Transporter-associated domain NIAKO_RS32380 a85e6d16fbdabd013cf4b67639cf94af 427 SUPERFAMILY SSF54631 216 345 4.04E-25 T 23-04-2016 NIAKO_RS20565 39daa256fd585dc5b39225ecf02f7d9a 354 PIRSF PIRSF018266 4 354 1.9E-38 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20565 39daa256fd585dc5b39225ecf02f7d9a 354 PANTHER PTHR30273:SF2 3 353 3.9E-41 T 23-04-2016 NIAKO_RS20565 39daa256fd585dc5b39225ecf02f7d9a 354 Pfam PF04773 FecR protein 135 221 1.5E-13 T 23-04-2016 IPR006860 FecR protein NIAKO_RS20565 39daa256fd585dc5b39225ecf02f7d9a 354 Pfam PF16344 Domain of unknown function (DUF4974) 238 343 2.6E-8 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS20565 39daa256fd585dc5b39225ecf02f7d9a 354 PANTHER PTHR30273 3 353 3.9E-41 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 SUPERFAMILY SSF81340 8 421 6.8E-83 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 Gene3D G3DSA:1.10.3080.10 13 419 1.1E-54 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 PANTHER PTHR11689 107 350 1.8E-24 T 23-04-2016 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 PRINTS PR00762 Chloride channel signature 155 174 3.3E-9 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 PRINTS PR00762 Chloride channel signature 362 378 3.3E-9 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 PRINTS PR00762 Chloride channel signature 334 354 3.3E-9 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS07050 08ae54a8b2a2dce9190ad6c963a05f47 451 Pfam PF00654 Voltage gated chloride channel 64 411 9.5E-70 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS00500 1a36e0d60b45defbd36ba37bffe25742 261 Gene3D G3DSA:3.40.50.150 29 259 1.6E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00500 1a36e0d60b45defbd36ba37bffe25742 261 Pfam PF13489 Methyltransferase domain 29 187 2.7E-20 T 23-04-2016 NIAKO_RS00500 1a36e0d60b45defbd36ba37bffe25742 261 SUPERFAMILY SSF53335 8 193 1.99E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00500 1a36e0d60b45defbd36ba37bffe25742 261 PANTHER PTHR10108 28 186 7.1E-30 T 23-04-2016 NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 Pfam PF00905 Penicillin binding protein transpeptidase domain 991 1325 5.5E-23 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 Pfam PF01098 Cell cycle protein 512 737 1.3E-38 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 PANTHER PTHR30474 581 756 3.6E-66 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 PANTHER PTHR30474 292 525 3.6E-66 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 SUPERFAMILY SSF56601 954 1144 5.15E-33 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 SUPERFAMILY SSF56601 1190 1327 5.15E-33 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS23565 45c43fd360a5309954ae098824cf5131 1339 Gene3D G3DSA:3.40.710.10 967 1330 9.6E-36 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 Pfam PF04773 FecR protein 169 264 1.2E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273 9 104 5.6E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273 171 268 5.6E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273 287 395 5.6E-65 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273:SF2 9 104 5.6E-65 T 23-04-2016 NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273:SF2 171 268 5.6E-65 T 23-04-2016 NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 PANTHER PTHR30273:SF2 287 395 5.6E-65 T 23-04-2016 NIAKO_RS16950 5593d72b56f82a4065a60c64fb3c561e 395 Pfam PF16344 Domain of unknown function (DUF4974) 291 391 4.3E-23 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 Pfam PF01593 Flavin containing amine oxidoreductase 18 253 8.7E-10 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 Gene3D G3DSA:3.50.50.60 156 157 1.4E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 Gene3D G3DSA:3.50.50.60 4 99 1.4E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 Gene3D G3DSA:3.50.50.60 209 300 1.4E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 213 238 1.2E-5 T 23-04-2016 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-5 T 23-04-2016 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 SUPERFAMILY SSF51905 434 472 7.12E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 SUPERFAMILY SSF51905 4 300 7.12E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 PANTHER PTHR10668:SF74 8 478 5.9E-161 T 23-04-2016 NIAKO_RS20250 f4de119275db8e2802659cae0738f867 481 PANTHER PTHR10668 8 478 5.9E-161 T 23-04-2016 NIAKO_RS11285 2c9ec9527303b4526e8690b5fac89309 85 Gene3D G3DSA:1.10.1200.10 1 79 6.4E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11285 2c9ec9527303b4526e8690b5fac89309 85 Pfam PF00550 Phosphopantetheine attachment site 9 76 3.2E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS11285 2c9ec9527303b4526e8690b5fac89309 85 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 79 8.0E-5 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NIAKO_RS11285 2c9ec9527303b4526e8690b5fac89309 85 SUPERFAMILY SSF47336 1 79 5.23E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Pfam PF07715 TonB-dependent Receptor Plug Domain 251 372 3.1E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF56935 238 397 5.13E-74 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF56935 475 563 5.13E-74 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF56935 1001 1044 5.13E-74 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF56935 614 940 5.13E-74 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF56935 1102 1129 5.13E-74 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 156 1196 5.0E-165 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.170.130.10 244 373 4.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 SUPERFAMILY SSF49464 155 254 1.73E-18 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 348 378 6.1E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532:SF51 736 1194 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532:SF51 681 717 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532:SF51 130 578 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.40.170.20 480 549 9.7E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.40.170.20 1083 1129 9.7E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.40.170.20 374 410 9.7E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.40.170.20 616 960 9.7E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.40.170.20 1010 1042 9.7E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532 736 1194 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532 681 717 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 PANTHER PTHR11532 130 578 7.8E-170 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Pfam PF13715 CarboxypepD_reg-like domain 156 242 7.7E-21 T 23-04-2016 NIAKO_RS32505 90f126ec6b63d850f2baa95fe65fbaa4 1196 Gene3D G3DSA:2.60.40.1120 155 243 6.4E-20 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS17785 07243d2c56ad08f7711a03151757f537 393 SUPERFAMILY SSF75005 259 386 1.72E-11 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17785 07243d2c56ad08f7711a03151757f537 393 Gene3D G3DSA:2.115.10.20 192 384 8.9E-14 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17785 07243d2c56ad08f7711a03151757f537 393 Gene3D G3DSA:2.115.10.20 86 169 8.3E-7 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS17785 07243d2c56ad08f7711a03151757f537 393 SUPERFAMILY SSF75005 71 251 6.12E-7 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS20325 6ceae31974e75efcb1fecab04b8c9a99 103 Pfam PF14559 Tetratricopeptide repeat 33 84 6.6E-6 T 23-04-2016 NIAKO_RS20325 6ceae31974e75efcb1fecab04b8c9a99 103 Gene3D G3DSA:1.25.40.10 6 83 1.5E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20325 6ceae31974e75efcb1fecab04b8c9a99 103 SUPERFAMILY SSF48452 6 80 1.66E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 Gene3D G3DSA:2.40.170.20 178 725 1.0E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 Gene3D G3DSA:2.170.130.10 44 177 3.1E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 176 1.3E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 SUPERFAMILY SSF56935 48 243 1.28E-68 T 23-04-2016 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 SUPERFAMILY SSF56935 270 728 1.28E-68 T 23-04-2016 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 PANTHER PTHR32552 49 244 1.6E-27 T 23-04-2016 NIAKO_RS18260 b588418fae1e07378e711ecea0d1a594 731 PANTHER PTHR32552 435 463 1.6E-27 T 23-04-2016 NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 SUPERFAMILY SSF53448 1 279 3.44E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 Pfam PF00535 Glycosyl transferase family 2 8 178 1.1E-21 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 PANTHER PTHR22916 1 143 2.0E-41 T 23-04-2016 NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 PANTHER PTHR22916 162 250 2.0E-41 T 23-04-2016 NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 PANTHER PTHR22916:SF9 1 143 2.0E-41 T 23-04-2016 NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 PANTHER PTHR22916:SF9 162 250 2.0E-41 T 23-04-2016 NIAKO_RS24290 b2d47c2599228241e3b747186dfbde7f 343 Gene3D G3DSA:3.90.550.10 4 254 1.3E-45 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS04785 6836f5b0aea0d00f58bf8193ec2e6c08 407 Pfam PF04116 Fatty acid hydroxylase superfamily 81 214 1.1E-27 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS04785 6836f5b0aea0d00f58bf8193ec2e6c08 407 PANTHER PTHR21624 9 394 7.7E-85 T 23-04-2016 NIAKO_RS04785 6836f5b0aea0d00f58bf8193ec2e6c08 407 PANTHER PTHR21624:SF1 9 394 7.7E-85 T 23-04-2016 NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 Pfam PF07859 alpha/beta hydrolase fold 93 299 3.9E-67 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 92 108 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 PANTHER PTHR23024 44 327 1.9E-88 T 23-04-2016 NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 PANTHER PTHR23024:SF128 44 327 1.9E-88 T 23-04-2016 NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 SUPERFAMILY SSF53474 33 326 5.07E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS24385 ea1e2fa8598d3a63fceba92b4c112783 327 Gene3D G3DSA:3.40.50.1820 7 327 2.0E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12115 e3c595da60185f2c1c5e947b1342d55a 308 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 2 210 4.0E-42 T 23-04-2016 IPR005901 GLPGLI family protein NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 Gene3D G3DSA:1.20.1260.10 1 157 1.4E-54 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 9.3E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 9.3E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 9.3E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 Pfam PF00210 Ferritin-like domain 18 157 6.2E-23 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 SUPERFAMILY SSF47240 3 157 3.9E-39 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PIRSF PIRSF005900 1 157 3.0E-43 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PANTHER PTHR30295 1 157 8.6E-45 T 23-04-2016 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 NIAKO_RS00235 b70184aed89d1b6bde07296e067c3272 157 PANTHER PTHR30295:SF6 1 157 8.6E-45 T 23-04-2016 NIAKO_RS33255 e4506885956ce76d05c9684b099d6894 355 Gene3D G3DSA:3.40.50.20 1 120 7.8E-19 T 23-04-2016 IPR016185 Pre-ATP-grasp domain NIAKO_RS33255 e4506885956ce76d05c9684b099d6894 355 Gene3D G3DSA:3.30.470.20 230 318 2.4E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS33255 e4506885956ce76d05c9684b099d6894 355 SUPERFAMILY SSF56059 106 309 1.67E-12 T 23-04-2016 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 Gene3D G3DSA:2.120.10.30 38 104 6.5E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 Pfam PF00196 Bacterial regulatory proteins, luxR family 902 949 4.8E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 SUPERFAMILY SSF46894 894 949 4.42E-9 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 SMART SM00421 899 956 0.0023 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 SUPERFAMILY SSF63829 173 183 1.77E-7 T 23-04-2016 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 SUPERFAMILY SSF63829 33 93 1.77E-7 T 23-04-2016 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 SUPERFAMILY SSF63829 260 346 1.77E-7 T 23-04-2016 NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 Gene3D G3DSA:1.10.10.10 896 950 3.6E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS33520 f7155ec1d55cc66ac86acdba2cbf770e 962 Pfam PF07495 Y_Y_Y domain 674 735 2.0E-14 T 23-04-2016 IPR011123 Two component regulator three Y NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 Pfam PF01039 Carboxyl transferase domain 37 531 1.9E-150 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 PANTHER PTHR22855:SF13 4 542 4.3E-269 T 23-04-2016 NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 PANTHER PTHR22855 4 542 4.3E-269 T 23-04-2016 NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 Gene3D G3DSA:3.90.226.10 20 264 1.4E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 Gene3D G3DSA:3.90.226.10 270 532 6.1E-86 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 SUPERFAMILY SSF52096 270 531 6.59E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS02080 cbd1f83ff4f60f360b8463ddbb213848 542 SUPERFAMILY SSF52096 15 258 1.83E-64 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 Pfam PF04773 FecR protein 188 296 2.1E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 PANTHER PTHR30273 190 413 2.4E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 PANTHER PTHR30273 1 125 2.4E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 Pfam PF16344 Domain of unknown function (DUF4974) 312 412 2.3E-21 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 PANTHER PTHR30273:SF2 190 413 2.4E-62 T 23-04-2016 NIAKO_RS35140 7e14e178b10ab0852e4bbdf1f39e9313 414 PANTHER PTHR30273:SF2 1 125 2.4E-62 T 23-04-2016 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 Pfam PF17168 Domain of unknown function (DUF5127) 95 306 7.5E-46 T 23-04-2016 IPR033433 Domain of unknown function DUF5127 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 Pfam PF08760 Domain of unknown function (DUF1793) 485 649 1.7E-54 T 23-04-2016 IPR014870 Domain of unknown function DUF1793 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 Pfam PF16335 Domain of unknown function (DUF4965) 311 479 8.3E-72 T 23-04-2016 IPR032514 Domain of unknown function DUF4965 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 Pfam PF16334 Domain of unknown function (DUF4964) 23 83 3.1E-24 T 23-04-2016 IPR032515 Domain of unknown function DUF4964 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 SUPERFAMILY SSF48208 360 562 2.55E-5 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 PANTHER PTHR31987 1 650 2.8E-227 T 23-04-2016 NIAKO_RS17535 06af5a880d0e2caf4af394e1db7006d4 661 PANTHER PTHR31987:SF1 1 650 2.8E-227 T 23-04-2016 NIAKO_RS28995 66e9100ffbbb4a8ac2a4ea8562fb2749 750 PANTHER PTHR30634:SF10 2 745 1.7E-274 T 23-04-2016 NIAKO_RS28995 66e9100ffbbb4a8ac2a4ea8562fb2749 750 PANTHER PTHR30634 2 745 1.7E-274 T 23-04-2016 NIAKO_RS29390 d643b94cda2c122af4884303158bbc76 262 SUPERFAMILY SSF51621 19 259 1.48E-57 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS29390 d643b94cda2c122af4884303158bbc76 262 Pfam PF13714 Phosphoenolpyruvate phosphomutase 23 252 1.7E-67 T 23-04-2016 NIAKO_RS29390 d643b94cda2c122af4884303158bbc76 262 Gene3D G3DSA:3.20.20.60 17 233 1.5E-55 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS29390 d643b94cda2c122af4884303158bbc76 262 PANTHER PTHR21631 16 254 8.9E-56 T 23-04-2016 NIAKO_RS29390 d643b94cda2c122af4884303158bbc76 262 PANTHER PTHR21631:SF18 16 254 8.9E-56 T 23-04-2016 NIAKO_RS06260 7d652bfd578f49032024b9349622ddcc 597 Pfam PF01734 Patatin-like phospholipase 24 249 1.0E-16 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS06260 7d652bfd578f49032024b9349622ddcc 597 SUPERFAMILY SSF52151 21 311 3.14E-21 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS06260 7d652bfd578f49032024b9349622ddcc 597 Gene3D G3DSA:3.40.1090.10 19 99 8.9E-13 T 23-04-2016 NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 Pfam PF01120 Alpha-L-fucosidase 23 85 1.0E-6 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 Gene3D G3DSA:2.60.120.260 107 211 3.0E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 PANTHER PTHR10030:SF28 11 213 7.2E-44 T 23-04-2016 NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 SUPERFAMILY SSF51445 12 92 4.84E-16 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 Gene3D G3DSA:3.20.20.80 12 92 1.3E-20 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 SUPERFAMILY SSF49785 122 209 5.67E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS18490 a3d113ce40484862a44d590811e358a3 215 PANTHER PTHR10030 11 213 7.2E-44 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 Gene3D G3DSA:3.20.20.70 1 217 2.5E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 217 32.54 T 23-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 SUPERFAMILY SSF51569 1 215 8.06E-75 T 23-04-2016 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 PANTHER PTHR10889 1 224 9.3E-88 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 SMART SM01133 2 215 4.6E-83 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 PIRSF PIRSF001357 1 223 6.2E-74 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 Pfam PF01791 DeoC/LacD family aldolase 4 212 1.6E-21 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 NIAKO_RS00765 2d874ac297015cb82e09ef609edde3c8 224 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 213 6.9E-75 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 Gene3D G3DSA:3.90.76.10 40 196 2.4E-44 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 PIRSF PIRSF002741 16 542 9.2E-101 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 Gene3D G3DSA:3.40.190.10 197 321 1.5E-24 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 Gene3D G3DSA:3.10.105.10 322 511 5.6E-50 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 SUPERFAMILY SSF53850 26 532 1.19E-118 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 PANTHER PTHR30290 2 542 1.8E-110 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 PANTHER PTHR30290:SF10 2 542 1.8E-110 T 23-04-2016 NIAKO_RS05080 2880628ced1c2128772177033677fe5a 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 459 5.9E-79 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain NIAKO_RS10685 7c67888fb179a73c6a3d8f059f1835bf 144 Gene3D G3DSA:1.20.120.520 5 140 5.1E-7 T 23-04-2016 NIAKO_RS10685 7c67888fb179a73c6a3d8f059f1835bf 144 Pfam PF01814 Hemerythrin HHE cation binding domain 21 120 2.1E-9 T 23-04-2016 IPR012312 Haemerythrin-like NIAKO_RS30650 483270f2fc7e3a9d6047953299f1bdc1 136 SMART SM00448 5 123 1.7E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30650 483270f2fc7e3a9d6047953299f1bdc1 136 Gene3D G3DSA:3.40.50.2300 3 128 1.9E-29 T 23-04-2016 NIAKO_RS30650 483270f2fc7e3a9d6047953299f1bdc1 136 Pfam PF00072 Response regulator receiver domain 8 121 3.9E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30650 483270f2fc7e3a9d6047953299f1bdc1 136 SUPERFAMILY SSF52172 4 128 1.1E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30650 483270f2fc7e3a9d6047953299f1bdc1 136 PANTHER PTHR26402 5 119 9.1E-25 T 23-04-2016 NIAKO_RS09565 9cb2a2e737e9697cecb70b2b73084caa 147 Pfam PF05751 FixH 4 142 1.6E-19 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH NIAKO_RS16725 955ab3f49b501d114f2a8ab681bbea05 297 SUPERFAMILY SSF56349 2 288 6.12E-28 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NIAKO_RS16725 955ab3f49b501d114f2a8ab681bbea05 297 Gene3D G3DSA:1.10.150.130 2 103 3.6E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal NIAKO_RS16725 955ab3f49b501d114f2a8ab681bbea05 297 Gene3D G3DSA:1.10.443.10 137 288 1.9E-12 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NIAKO_RS06335 dc469e7b23c4b974cba2b1a9c6b40796 155 Pfam PF04138 GtrA-like protein 11 65 4.3E-7 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 NIAKO_RS14955 9886ad81fe5b3d98e43e898eeb538368 297 Gene3D G3DSA:2.60.40.1120 23 100 1.9E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS14955 9886ad81fe5b3d98e43e898eeb538368 297 SUPERFAMILY SSF49464 24 96 1.37E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 Pfam PF13175 AAA ATPase domain 228 341 1.2E-13 T 23-04-2016 NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 PANTHER PTHR32182:SF7 301 444 4.1E-12 T 23-04-2016 NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 Gene3D G3DSA:3.40.50.300 1 356 6.5E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 PANTHER PTHR32182 301 444 4.1E-12 T 23-04-2016 NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 SUPERFAMILY SSF52540 1 217 2.7E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 SUPERFAMILY SSF52540 256 356 2.7E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS08675 e2d163f3da20cdf3d631b0d8ac87a647 648 Pfam PF13476 AAA domain 5 81 3.9E-11 T 23-04-2016 NIAKO_RS25315 ad34c82eb6d0d88d4609dc14f6b33a6a 147 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 58 137 3.8E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS25315 ad34c82eb6d0d88d4609dc14f6b33a6a 147 SUPERFAMILY SSF46626 43 143 2.68E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS25315 ad34c82eb6d0d88d4609dc14f6b33a6a 147 Gene3D G3DSA:1.10.760.10 48 144 7.9E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS18425 7dd727b4fe6030f0f5e9d17376f8765e 108 Pfam PF01527 Transposase 14 89 1.6E-10 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NIAKO_RS18425 7dd727b4fe6030f0f5e9d17376f8765e 108 SUPERFAMILY SSF46689 16 89 6.45E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18425 7dd727b4fe6030f0f5e9d17376f8765e 108 Gene3D G3DSA:1.10.10.10 15 60 3.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 SUPERFAMILY SSF46689 194 242 1.79E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 Gene3D G3DSA:1.10.10.60 141 190 9.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 Gene3D G3DSA:1.10.10.60 205 248 7.0E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 SMART SM00342 156 238 1.6E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 Pfam PF12833 Helix-turn-helix domain 163 239 4.6E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 SUPERFAMILY SSF46689 139 189 2.96E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16385 1aa576b99b15ec6fa38ad7c6e98636f0 266 PANTHER PTHR11019 137 246 1.4E-18 T 23-04-2016 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 Gene3D G3DSA:3.40.50.1860 4 179 6.7E-53 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 PANTHER PTHR21198 1 274 1.8E-93 T 23-04-2016 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 SUPERFAMILY SSF53681 6 111 5.95E-31 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 Hamap MF_00258 Glutamate racemase [murI]. 5 266 31.194 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 SUPERFAMILY SSF53681 117 268 5.72E-31 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 PANTHER PTHR21198:SF2 1 274 1.8E-93 T 23-04-2016 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 253 1.6E-57 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.1E-34 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS32460 51b957dd67ac60058f036063c491ba00 285 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 189 199 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS35755 40ddc73b2b988d4e2d794280d14f1ac1 362 SUPERFAMILY SSF53756 1 362 6.02E-45 T 23-04-2016 NIAKO_RS35755 40ddc73b2b988d4e2d794280d14f1ac1 362 Pfam PF13579 Glycosyl transferase 4-like domain 12 171 3.6E-7 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS35755 40ddc73b2b988d4e2d794280d14f1ac1 362 PANTHER PTHR12526 1 362 1.9E-25 T 23-04-2016 NIAKO_RS35755 40ddc73b2b988d4e2d794280d14f1ac1 362 Gene3D G3DSA:3.40.50.2000 194 335 9.6E-11 T 23-04-2016 NIAKO_RS35755 40ddc73b2b988d4e2d794280d14f1ac1 362 Pfam PF00534 Glycosyl transferases group 1 192 337 1.5E-12 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 69 193 6.2E-9 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Gene3D G3DSA:2.60.40.1560 636 729 3.2E-23 T 23-04-2016 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Pfam PF00703 Glycosyl hydrolases family 2 195 307 3.5E-9 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PANTHER PTHR10066:SF46 57 519 1.4E-80 T 23-04-2016 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PANTHER PTHR10066:SF46 563 677 1.4E-80 T 23-04-2016 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Pfam PF16355 Domain of unknown function (DUF4982) 655 714 2.0E-14 T 23-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PANTHER PTHR10066 57 519 1.4E-80 T 23-04-2016 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PANTHER PTHR10066 563 677 1.4E-80 T 23-04-2016 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 314 525 1.1E-23 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Gene3D G3DSA:3.20.20.80 312 528 8.3E-66 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Gene3D G3DSA:3.20.20.80 561 634 8.3E-66 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 SUPERFAMILY SSF49785 15 193 2.13E-27 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Gene3D G3DSA:2.60.40.320 185 307 1.7E-14 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PRINTS PR00132 Glycosyl hydrolase family 2 signature 350 368 1.1E-10 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PRINTS PR00132 Glycosyl hydrolase family 2 signature 319 333 1.1E-10 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 PRINTS PR00132 Glycosyl hydrolase family 2 signature 415 430 1.1E-10 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 Gene3D G3DSA:2.60.120.260 18 184 1.5E-27 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 SUPERFAMILY SSF49303 195 307 5.18E-11 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NIAKO_RS26415 2467e5e0c96dcf24aabb7c82f71c299a 823 SUPERFAMILY SSF51445 304 632 5.6E-63 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS02410 f118f1d740cce138ba8b1fafe0570814 182 Gene3D G3DSA:2.60.40.1070 109 173 3.6E-4 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal NIAKO_RS32895 bec240a59fd127aae9d3518ce0a8d6e6 191 Pfam PF06445 GyrI-like small molecule binding domain 27 171 3.2E-7 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain NIAKO_RS32895 bec240a59fd127aae9d3518ce0a8d6e6 191 Gene3D G3DSA:3.20.80.10 27 172 2.1E-7 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS32895 bec240a59fd127aae9d3518ce0a8d6e6 191 SUPERFAMILY SSF55136 28 171 4.97E-11 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain NIAKO_RS32895 bec240a59fd127aae9d3518ce0a8d6e6 191 SMART SM00871 26 172 4.7E-5 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 Gene3D G3DSA:1.25.40.10 436 526 2.6E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 Gene3D G3DSA:1.25.40.10 221 314 2.6E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 Gene3D G3DSA:1.25.40.10 361 373 2.6E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 Pfam PF07980 SusD family 356 620 3.0E-27 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 Pfam PF14322 Starch-binding associating with outer membrane 32 231 4.2E-15 T 23-04-2016 NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 SUPERFAMILY SSF48452 360 620 4.75E-79 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14160 96cd625470aaa72b41fdbbfe347f0615 644 SUPERFAMILY SSF48452 27 333 4.75E-79 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS21315 fb873cc547b795ad0f362fec439919f7 241 Pfam PF14344 Domain of unknown function (DUF4397) 140 225 2.9E-8 T 23-04-2016 IPR025510 Domain of unknown function DUF4397 NIAKO_RS21315 fb873cc547b795ad0f362fec439919f7 241 Pfam PF14344 Domain of unknown function (DUF4397) 41 157 2.3E-16 T 23-04-2016 IPR025510 Domain of unknown function DUF4397 NIAKO_RS24885 d461530d8411737f9520804c313a1083 414 Gene3D G3DSA:3.40.50.2300 83 223 5.5E-4 T 23-04-2016 NIAKO_RS24885 d461530d8411737f9520804c313a1083 414 SUPERFAMILY SSF53822 83 410 4.71E-10 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS10025 7bb7422887e49a4b2c39f761f2148957 554 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 398 412 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS10025 7bb7422887e49a4b2c39f761f2148957 554 PANTHER PTHR11079 346 552 1.6E-65 T 23-04-2016 NIAKO_RS10025 7bb7422887e49a4b2c39f761f2148957 554 SUPERFAMILY SSF55120 352 551 3.84E-59 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS10025 7bb7422887e49a4b2c39f761f2148957 554 Pfam PF00849 RNA pseudouridylate synthase 361 507 1.9E-26 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NIAKO_RS10025 7bb7422887e49a4b2c39f761f2148957 554 PANTHER PTHR11079:SF66 346 552 1.6E-65 T 23-04-2016 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 15 252 6.8E-59 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 SMART SM00967 16 90 6.6E-14 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 SUPERFAMILY SSF75217 84 254 1.96E-45 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 SUPERFAMILY SSF55315 13 83 7.89E-12 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 16 89 2.5E-16 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 Pfam PF00588 SpoU rRNA Methylase family 107 247 5.4E-40 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 Gene3D G3DSA:3.30.1330.30 13 83 4.4E-15 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 PANTHER PTHR12029 6 254 1.5E-67 T 23-04-2016 NIAKO_RS07520 905138f1a27b503a8d1b4c9dc08b1ffa 256 Gene3D G3DSA:3.40.1280.10 103 254 5.1E-49 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 PANTHER PTHR22749:SF0 1 323 4.3E-105 T 23-04-2016 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 320 2.4E-73 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 Gene3D G3DSA:3.40.50.620 8 179 6.7E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 SMART SM00904 183 322 7.4E-57 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 61 1.8E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 Pfam PF06574 FAD synthetase 13 167 6.9E-49 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 SUPERFAMILY SSF82114 174 322 4.14E-41 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 SUPERFAMILY SSF52374 14 179 7.88E-35 T 23-04-2016 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 PANTHER PTHR22749 1 323 4.3E-105 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 Pfam PF01687 Riboflavin kinase 184 320 2.9E-34 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 PIRSF PIRSF004491 1 324 2.4E-99 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NIAKO_RS04405 ca7922cbc64f80163d6ae5ce4336f371 324 Gene3D G3DSA:2.40.30.30 180 322 8.4E-41 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 NIAKO_RS36990 856bff6b65015cd2de2739a67ba13c89 68 Gene3D G3DSA:1.10.10.10 1 60 2.0E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36990 856bff6b65015cd2de2739a67ba13c89 68 PANTHER PTHR33204 1 67 2.0E-12 T 23-04-2016 NIAKO_RS36990 856bff6b65015cd2de2739a67ba13c89 68 Pfam PF01638 HxlR-like helix-turn-helix 1 54 3.2E-13 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS36990 856bff6b65015cd2de2739a67ba13c89 68 SUPERFAMILY SSF46785 1 62 1.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36990 856bff6b65015cd2de2739a67ba13c89 68 PANTHER PTHR33204:SF12 1 67 2.0E-12 T 23-04-2016 NIAKO_RS22270 3d3bc465f8491f84dea48817bac21bfa 217 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 204 7.5E-14 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NIAKO_RS22270 3d3bc465f8491f84dea48817bac21bfa 217 SUPERFAMILY SSF89392 29 216 9.02E-20 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX NIAKO_RS22270 3d3bc465f8491f84dea48817bac21bfa 217 Gene3D G3DSA:2.50.20.10 29 215 7.3E-25 T 23-04-2016 NIAKO_RS11265 f760bdd3a35cf83b832929b0065b4c28 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 71 7.5E-13 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS11265 f760bdd3a35cf83b832929b0065b4c28 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS01925 ae25ca6e571b687b2e90d2c2381a57ae 430 PANTHER PTHR11785:SF337 6 427 3.0E-117 T 23-04-2016 NIAKO_RS01925 ae25ca6e571b687b2e90d2c2381a57ae 430 TIGRFAM TIGR00908 2A0305: ethanolamine permease 5 427 2.9E-152 T 23-04-2016 IPR004757 Ethanolamine permease NIAKO_RS01925 ae25ca6e571b687b2e90d2c2381a57ae 430 Pfam PF13520 Amino acid permease 14 419 2.1E-46 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01925 ae25ca6e571b687b2e90d2c2381a57ae 430 PANTHER PTHR11785 6 427 3.0E-117 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01925 ae25ca6e571b687b2e90d2c2381a57ae 430 PIRSF PIRSF006060 2 428 9.7E-78 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS26660 97efcab048ae75a3df6d4eb02b1a8c4d 441 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 331 6.7E-20 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS26660 97efcab048ae75a3df6d4eb02b1a8c4d 441 Gene3D G3DSA:3.40.50.300 1 341 1.0E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26660 97efcab048ae75a3df6d4eb02b1a8c4d 441 SUPERFAMILY SSF52540 1 199 2.6E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26660 97efcab048ae75a3df6d4eb02b1a8c4d 441 SUPERFAMILY SSF52540 233 335 2.6E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34715 65d44b9fd1c216e3c5cfa11df7939b96 130 Pfam PF12867 DinB superfamily 9 122 1.1E-7 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS34715 65d44b9fd1c216e3c5cfa11df7939b96 130 Gene3D G3DSA:1.20.120.450 3 125 1.2E-20 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS34715 65d44b9fd1c216e3c5cfa11df7939b96 130 SUPERFAMILY SSF109854 2 123 9.62E-16 T 23-04-2016 NIAKO_RS27850 d3e6439001924cde9512787c16adb415 503 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 352 482 4.3E-10 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NIAKO_RS27850 d3e6439001924cde9512787c16adb415 503 Pfam PF01943 Polysaccharide biosynthesis protein 11 291 5.5E-19 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 153 229 4.4E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 74 152 9.7E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 399 500 1.0E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 487 585 1.99E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 81 99 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 165 181 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 347 366 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 269 290 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 99 113 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 183 200 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 387 405 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 141 160 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PRINTS PR00681 Ribosomal protein S1 signature 212 232 8.3E-59 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 332 421 2.47E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 496 575 6.4E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 414 495 3.8E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 232 320 7.0E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PANTHER PTHR10724:SF6 78 567 4.3E-187 T 23-04-2016 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 419 491 4.0E-19 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 247 317 4.6E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 160 228 1.2E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 79 144 2.6E-11 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 332 404 3.3E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SMART SM00316 506 573 3.0E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 247 333 1.04E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Gene3D G3DSA:2.40.50.140 334 413 1.2E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Pfam PF00575 S1 RNA binding domain 333 404 2.8E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Pfam PF00575 S1 RNA binding domain 505 572 2.3E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Pfam PF00575 S1 RNA binding domain 417 491 3.6E-15 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Pfam PF00575 S1 RNA binding domain 245 317 1.2E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 Pfam PF00575 S1 RNA binding domain 159 228 1.4E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 PANTHER PTHR10724 78 567 4.3E-187 T 23-04-2016 NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 146 231 4.88E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22880 b547cf89f57396cb6bf5b81d0e111274 641 SUPERFAMILY SSF50249 75 170 1.72E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS00100 5253c964e5a7b426b6c0bc96bf3391f0 228 SUPERFAMILY SSF52833 20 225 3.29E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS00100 5253c964e5a7b426b6c0bc96bf3391f0 228 Pfam PF13743 Thioredoxin 24 217 5.1E-29 T 23-04-2016 NIAKO_RS00100 5253c964e5a7b426b6c0bc96bf3391f0 228 Gene3D G3DSA:1.10.472.60 91 190 6.4E-15 T 23-04-2016 IPR023169 UPF0413, central domain NIAKO_RS00100 5253c964e5a7b426b6c0bc96bf3391f0 228 Gene3D G3DSA:3.40.30.10 16 90 1.2E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS33615 0f42f20d84ce3bc7deab84dbe879b71f 248 Pfam PF09970 Nucleotidyl transferase of unknown function (DUF2204) 15 157 4.1E-11 T 23-04-2016 IPR018700 Protein of unknown function DUF2204 NIAKO_RS33615 0f42f20d84ce3bc7deab84dbe879b71f 248 SUPERFAMILY SSF81301 17 145 1.8E-12 T 23-04-2016 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 SUPERFAMILY SSF51905 2 271 8.19E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 Gene3D G3DSA:3.50.50.60 93 153 1.7E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 PANTHER PTHR23024 48 136 6.8E-39 T 23-04-2016 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 Gene3D G3DSA:3.50.50.60 154 248 4.7E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 Gene3D G3DSA:3.50.50.60 290 366 4.7E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 6 339 7.9E-120 T 23-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NIAKO_RS13605 83fd6f66cb817f9d38217566408f5133 444 PANTHER PTHR23024:SF215 48 136 6.8E-39 T 23-04-2016 NIAKO_RS03390 f97bc1edd5809f3d55a3661a36d83e21 188 SUPERFAMILY SSF51206 17 143 2.49E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS03390 f97bc1edd5809f3d55a3661a36d83e21 188 Gene3D G3DSA:2.60.120.10 2 155 2.9E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS03390 f97bc1edd5809f3d55a3661a36d83e21 188 PANTHER PTHR24567:SF33 12 187 2.0E-21 T 23-04-2016 NIAKO_RS03390 f97bc1edd5809f3d55a3661a36d83e21 188 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 5.6E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS03390 f97bc1edd5809f3d55a3661a36d83e21 188 PANTHER PTHR24567 12 187 2.0E-21 T 23-04-2016 NIAKO_RS35680 87bb84a1a7879c0dbea9e7a5504c28bf 785 SUPERFAMILY SSF55781 334 401 2.09E-6 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS35680 87bb84a1a7879c0dbea9e7a5504c28bf 785 Gene3D G3DSA:3.30.450.40 318 401 5.3E-7 T 23-04-2016 IPR029016 GAF domain-like NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 SUPERFAMILY SSF52768 127 345 9.71E-58 T 23-04-2016 NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 SUPERFAMILY SSF52768 24 67 9.71E-58 T 23-04-2016 NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 PANTHER PTHR11358 130 347 4.9E-44 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 Pfam PF00491 Arginase family 30 339 3.3E-61 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 Gene3D G3DSA:3.40.800.10 26 70 3.3E-66 T 23-04-2016 IPR023696 Ureohydrolase domain NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 Gene3D G3DSA:3.40.800.10 103 347 3.3E-66 T 23-04-2016 IPR023696 Ureohydrolase domain NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 PRINTS PR00116 Arginase signature 267 296 1.6E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS07460 658749d71d5adc4e53e9a3b3c2b09fc6 348 PRINTS PR00116 Arginase signature 151 166 1.6E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS05640 9f7a8ec445e64b9bb51c996a96d407c1 170 PANTHER PTHR30543 1 170 1.1E-15 T 23-04-2016 NIAKO_RS05640 9f7a8ec445e64b9bb51c996a96d407c1 170 Gene3D G3DSA:3.40.50.360 7 170 5.3E-21 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS05640 9f7a8ec445e64b9bb51c996a96d407c1 170 Pfam PF03358 NADPH-dependent FMN reductase 7 135 6.4E-19 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NIAKO_RS05640 9f7a8ec445e64b9bb51c996a96d407c1 170 SUPERFAMILY SSF52218 7 169 5.97E-26 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS13720 aa1f0b07a6baf9620f5dc72ead8bbcdf 483 Pfam PF07980 SusD family 338 454 2.1E-6 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13720 aa1f0b07a6baf9620f5dc72ead8bbcdf 483 SUPERFAMILY SSF48452 17 474 1.01E-53 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13720 aa1f0b07a6baf9620f5dc72ead8bbcdf 483 Pfam PF14322 Starch-binding associating with outer membrane 21 222 9.7E-37 T 23-04-2016 NIAKO_RS13720 aa1f0b07a6baf9620f5dc72ead8bbcdf 483 Gene3D G3DSA:1.25.40.10 205 388 2.7E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16075 0186937b569f5e186a46e4f492e4aedc 391 PANTHER PTHR30590 1 391 2.2E-73 T 23-04-2016 NIAKO_RS16075 0186937b569f5e186a46e4f492e4aedc 391 PANTHER PTHR30590:SF2 1 391 2.2E-73 T 23-04-2016 NIAKO_RS16075 0186937b569f5e186a46e4f492e4aedc 391 Pfam PF04235 Protein of unknown function (DUF418) 216 382 2.2E-40 T 23-04-2016 IPR007349 Domain of unknown function DUF418 NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 6 287 1.3E-95 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 Gene3D G3DSA:3.40.50.720 2 198 2.5E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 Pfam PF04321 RmlD substrate binding domain 6 288 1.0E-101 T 23-04-2016 IPR029903 RmlD-like substrate binding domain NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 PANTHER PTHR10491:SF4 1 287 5.7E-94 T 23-04-2016 NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 Gene3D G3DSA:3.90.25.10 222 274 1.0E-29 T 23-04-2016 NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 SUPERFAMILY SSF51735 6 288 6.11E-96 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24670 6fe05ee036ee896cdc386f3ed0fa7372 292 PANTHER PTHR10491 1 287 5.7E-94 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 SUPERFAMILY SSF88946 4 86 9.42E-8 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 Gene3D G3DSA:1.10.1740.10 4 79 2.1E-6 T 23-04-2016 NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 PANTHER PTHR30173:SF15 4 387 2.4E-83 T 23-04-2016 NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 Gene3D G3DSA:1.10.10.10 133 170 3.7E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 PANTHER PTHR30173 4 387 2.4E-83 T 23-04-2016 NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 SUPERFAMILY SSF88659 112 170 3.27E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS19215 874bc265748196631ab38c6cd0356a79 418 Pfam PF04542 Sigma-70 region 2 29 79 8.9E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS35625 ddac54b49b6be61ad2dcf9e8862db283 308 Gene3D G3DSA:3.50.30.40 67 241 2.2E-28 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS35625 ddac54b49b6be61ad2dcf9e8862db283 308 SUPERFAMILY SSF89562 78 239 7.72E-19 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS35625 ddac54b49b6be61ad2dcf9e8862db283 308 Pfam PF03737 Demethylmenaquinone methyltransferase 77 231 2.7E-13 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIAKO_RS33160 f7e0dfb20e1957741668267bcff23469 161 Pfam PF04308 Ribonuclease H-like 31 159 2.8E-38 T 23-04-2016 IPR007405 Bacteriophage KVP40, Orf299 NIAKO_RS33160 f7e0dfb20e1957741668267bcff23469 161 PANTHER PTHR39961 39 161 1.6E-20 T 23-04-2016 NIAKO_RS33160 f7e0dfb20e1957741668267bcff23469 161 PANTHER PTHR39961:SF1 39 161 1.6E-20 T 23-04-2016 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 Gene3D G3DSA:3.40.50.300 576 754 6.9E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 PANTHER PTHR32309 6 128 1.5E-88 T 23-04-2016 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 PANTHER PTHR32309 187 773 1.5E-88 T 23-04-2016 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 558 752 8.5E-35 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 SUPERFAMILY SSF52540 577 757 8.22E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 Pfam PF02706 Chain length determinant protein 16 250 1.8E-10 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 PANTHER PTHR32309:SF13 6 128 1.5E-88 T 23-04-2016 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 PANTHER PTHR32309:SF13 187 773 1.5E-88 T 23-04-2016 NIAKO_RS26325 a05267a3d7693ae70cf528f571b894ff 786 Pfam PF13614 AAA domain 577 698 5.3E-9 T 23-04-2016 IPR025669 AAA domain NIAKO_RS32280 029a00ce9140a9730535afd8c1404dab 336 PANTHER PTHR11820 1 333 3.1E-86 T 23-04-2016 NIAKO_RS32280 029a00ce9140a9730535afd8c1404dab 336 PANTHER PTHR11820:SF88 1 333 3.1E-86 T 23-04-2016 NIAKO_RS32280 029a00ce9140a9730535afd8c1404dab 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 320 7.5E-59 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS32280 029a00ce9140a9730535afd8c1404dab 336 SUPERFAMILY SSF56529 84 322 1.2E-68 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS32280 029a00ce9140a9730535afd8c1404dab 336 Gene3D G3DSA:3.90.850.10 85 316 1.8E-65 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 SUPERFAMILY SSF56762 23 372 3.27E-119 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 PANTHER PTHR11993:SF10 4 367 2.4E-175 T 23-04-2016 NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 PANTHER PTHR11993 4 367 2.4E-175 T 23-04-2016 NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 Gene3D G3DSA:1.10.645.10 10 238 1.0E-44 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 Gene3D G3DSA:1.10.645.10 241 356 3.3E-18 T 23-04-2016 IPR029014 NiFe hydrogenase-like NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 298 372 3.7E-25 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 127 296 4.7E-69 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NIAKO_RS35500 312185237c6f7b6fb9c081badf604044 372 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 4 372 43.502 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NIAKO_RS01245 d76ef0ae7d3cc3892b04d75c874a298e 397 Pfam PF07786 Protein of unknown function (DUF1624) 15 219 1.5E-15 T 23-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 NIAKO_RS01245 d76ef0ae7d3cc3892b04d75c874a298e 397 PANTHER PTHR40407 12 397 5.6E-47 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532:SF57 12 402 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532:SF57 786 1001 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532:SF57 545 768 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532:SF57 481 507 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 228 3.7E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Gene3D G3DSA:2.60.40.1120 29 94 4.5E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF56935 830 874 1.28E-78 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF56935 111 251 1.28E-78 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF56935 290 377 1.28E-78 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF56935 405 756 1.28E-78 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF56935 906 981 1.28E-78 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Gene3D G3DSA:2.40.170.20 839 864 2.0E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Gene3D G3DSA:2.40.170.20 896 970 2.0E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Gene3D G3DSA:2.40.170.20 232 773 2.0E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532 12 402 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532 786 1001 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532 545 768 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 PANTHER PTHR11532 481 507 8.6E-178 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 1.1E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Pfam PF13715 CarboxypepD_reg-like domain 29 111 1.8E-15 T 23-04-2016 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 SUPERFAMILY SSF49464 27 107 1.7E-14 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 1003 5.1E-194 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06280 e69bb31ff6e71ef6dc6a137870475f57 1003 Gene3D G3DSA:2.170.130.10 121 231 9.6E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 PANTHER PTHR10992 13 284 2.4E-20 T 23-04-2016 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 PANTHER PTHR10992:SF771 13 284 2.4E-20 T 23-04-2016 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 Gene3D G3DSA:3.40.50.1820 25 282 2.1E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 Pfam PF12146 Serine aminopeptidase, S33 36 274 9.6E-18 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 5.0E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 5.0E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 5.0E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS31950 759aee6cd1f23b04ff2c30d59fb67edc 284 SUPERFAMILY SSF53474 9 273 5.4E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PANTHER PTHR10264:SF78 32 277 4.4E-34 T 23-04-2016 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PRINTS PR00679 Prohibitin signature 216 239 2.7E-10 T 23-04-2016 IPR000163 Prohibitin GO:0016020 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PRINTS PR00679 Prohibitin signature 144 162 2.7E-10 T 23-04-2016 IPR000163 Prohibitin GO:0016020 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PRINTS PR00679 Prohibitin signature 239 255 2.7E-10 T 23-04-2016 IPR000163 Prohibitin GO:0016020 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PRINTS PR00679 Prohibitin signature 121 140 2.7E-10 T 23-04-2016 IPR000163 Prohibitin GO:0016020 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 Pfam PF01145 SPFH domain / Band 7 family 51 240 5.0E-27 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 SUPERFAMILY SSF117892 113 227 1.29E-16 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 PANTHER PTHR10264 32 277 4.4E-34 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS30750 9b9c3deacff4bd50fd7d35779bf25e59 302 SMART SM00244 47 221 9.6E-17 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 SMART SM00342 206 288 6.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 SUPERFAMILY SSF46689 244 292 2.37E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 PANTHER PTHR11019 43 290 1.2E-39 T 23-04-2016 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 PANTHER PTHR11019:SF45 43 290 1.2E-39 T 23-04-2016 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 9.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 9.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 Gene3D G3DSA:2.60.120.280 41 175 3.2E-14 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 Pfam PF02311 AraC-like ligand binding domain 35 157 6.9E-11 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 Pfam PF12833 Helix-turn-helix domain 211 290 1.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 Gene3D G3DSA:1.10.10.60 245 292 3.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS20165 5a9c6fa7c573cb5eef63b08803ce447c 294 SUPERFAMILY SSF51215 39 174 2.22E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 Gene3D G3DSA:3.20.20.140 216 501 5.7E-17 T 23-04-2016 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 SUPERFAMILY SSF51556 81 143 1.4E-36 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 SUPERFAMILY SSF51556 222 516 1.4E-36 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 Pfam PF07969 Amidohydrolase family 70 557 2.6E-98 T 23-04-2016 IPR013108 Amidohydrolase 3 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 PANTHER PTHR22642 22 575 6.1E-125 T 23-04-2016 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 Gene3D G3DSA:3.20.20.140 502 557 2.4E-6 T 23-04-2016 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 Gene3D G3DSA:2.30.40.10 17 107 7.8E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 SUPERFAMILY SSF51338 516 561 2.16E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 SUPERFAMILY SSF51338 17 82 2.16E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS15555 c3cf86084594f9d1932199fec7391529 588 PANTHER PTHR22642:SF2 22 575 6.1E-125 T 23-04-2016 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 1.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 1.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 1.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 1.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 SUPERFAMILY SSF47384 260 341 2.35E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 498 3.9E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 Gene3D G3DSA:3.30.565.10 329 497 1.6E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 SMART SM00387 387 499 1.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 274 338 3.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 SUPERFAMILY SSF55874 331 497 1.96E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PANTHER PTHR24423 266 496 7.7E-61 T 23-04-2016 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 PANTHER PTHR24423 136 160 7.7E-61 T 23-04-2016 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 Gene3D G3DSA:1.10.287.130 267 328 2.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS37385 2bfbda667bdae92e2c03b3dcb90e31ac 499 SMART SM00388 273 341 4.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS24100 3697cb274004ad0c54b640029eb1376b 294 Gene3D G3DSA:1.20.144.10 77 286 1.1E-15 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS24100 3697cb274004ad0c54b640029eb1376b 294 Pfam PF01569 PAP2 superfamily 170 285 3.5E-8 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS24100 3697cb274004ad0c54b640029eb1376b 294 SUPERFAMILY SSF48317 133 290 5.1E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 199 274 3.0E-16 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 200 274 6.5E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 PANTHER PTHR33446 59 274 7.6E-19 T 23-04-2016 NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 PANTHER PTHR33446:SF2 59 274 7.6E-19 T 23-04-2016 NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 Gene3D G3DSA:3.30.1150.10 181 274 1.6E-7 T 23-04-2016 NIAKO_RS34865 35b6eb5e278ded4172b960d912d82f2c 277 SUPERFAMILY SSF74653 192 272 1.7E-16 T 23-04-2016 NIAKO_RS01665 e107b4a9d4f6c975d3ecf8d6ade814e4 523 Gene3D G3DSA:2.40.160.20 335 482 3.3E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS01665 e107b4a9d4f6c975d3ecf8d6ade814e4 523 SUPERFAMILY SSF56925 333 511 2.88E-11 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS01665 e107b4a9d4f6c975d3ecf8d6ade814e4 523 Pfam PF13505 Outer membrane protein beta-barrel domain 342 482 6.8E-10 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS03150 126134b8525ac4511dd4c3b5403378c7 128 PANTHER PTHR21366 1 127 1.8E-28 T 23-04-2016 NIAKO_RS03150 126134b8525ac4511dd4c3b5403378c7 128 SUPERFAMILY SSF54593 3 127 2.89E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS03150 126134b8525ac4511dd4c3b5403378c7 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 125 4.0E-15 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS03150 126134b8525ac4511dd4c3b5403378c7 128 Gene3D G3DSA:3.10.180.10 8 127 1.4E-30 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS13175 94537bd254f39fcf4285e2d75be0f636 151 SUPERFAMILY SSF51197 1 150 2.42E-44 T 23-04-2016 NIAKO_RS13175 94537bd254f39fcf4285e2d75be0f636 151 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 151 1.1E-35 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS13175 94537bd254f39fcf4285e2d75be0f636 151 Pfam PF04074 Domain of unknown function (DUF386) 1 148 1.4E-47 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS13175 94537bd254f39fcf4285e2d75be0f636 151 Gene3D G3DSA:2.60.120.370 1 150 6.5E-49 T 23-04-2016 IPR004375 YhcH/YjgK/YiaL family NIAKO_RS13175 94537bd254f39fcf4285e2d75be0f636 151 PANTHER PTHR34986 2 150 3.3E-44 T 23-04-2016 NIAKO_RS03270 261c7b4ca5b21e36d5f0ce6dca3346b7 117 SUPERFAMILY SSF46626 13 113 1.81E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS03270 261c7b4ca5b21e36d5f0ce6dca3346b7 117 Gene3D G3DSA:1.10.760.10 13 112 7.1E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS34195 19d104aef2a0b6c7e6995aaec570779a 215 SUPERFAMILY SSF51735 1 202 1.61E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34195 19d104aef2a0b6c7e6995aaec570779a 215 Gene3D G3DSA:3.40.50.720 1 192 1.1E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34195 19d104aef2a0b6c7e6995aaec570779a 215 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 95 3.3E-11 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIAKO_RS34195 19d104aef2a0b6c7e6995aaec570779a 215 PANTHER PTHR14239:SF9 1 213 7.1E-60 T 23-04-2016 NIAKO_RS34195 19d104aef2a0b6c7e6995aaec570779a 215 PANTHER PTHR14239 1 213 7.1E-60 T 23-04-2016 NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 PANTHER PTHR11819 382 859 1.9E-155 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 SUPERFAMILY SSF50965 32 371 1.7E-21 T 23-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 Gene3D G3DSA:2.120.10.80 80 372 1.6E-26 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 Pfam PF00474 Sodium:solute symporter family 414 815 1.4E-45 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 PANTHER PTHR11819:SF161 382 859 1.9E-155 T 23-04-2016 NIAKO_RS02780 e92a17740bc727d4cf04dfaaf97fe9e7 859 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 414 816 1.5E-73 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 Gene3D G3DSA:3.30.1150.10 181 274 2.3E-5 T 23-04-2016 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 PANTHER PTHR33446:SF2 71 274 7.1E-13 T 23-04-2016 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 273 7.1E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 SUPERFAMILY SSF74653 191 272 1.83E-14 T 23-04-2016 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 PANTHER PTHR33446 71 274 7.1E-13 T 23-04-2016 NIAKO_RS23545 a50b148e01b0076cd413af480bc4276c 279 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 196 274 9.3E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 PANTHER PTHR30572:SF4 410 808 8.8E-83 T 23-04-2016 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 PANTHER PTHR30572:SF4 295 367 8.8E-83 T 23-04-2016 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 PANTHER PTHR30572 410 808 8.8E-83 T 23-04-2016 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 PANTHER PTHR30572 295 367 8.8E-83 T 23-04-2016 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 Pfam PF12704 MacB-like periplasmic core domain 20 234 5.4E-22 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 Pfam PF02687 FtsX-like permease family 299 414 2.2E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS05915 36e79083403c425d7aba3b42873dd819 808 Pfam PF02687 FtsX-like permease family 688 798 8.3E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS04180 7924a388c06aa6752a6d8f18100a5faa 67 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 Gene3D G3DSA:3.90.550.10 169 398 6.9E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 Pfam PF13302 Acetyltransferase (GNAT) domain 5 136 7.4E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 PANTHER PTHR22916:SF2 116 372 7.2E-61 T 23-04-2016 NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 SUPERFAMILY SSF53448 169 380 1.69E-38 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 PANTHER PTHR22916 116 372 7.2E-61 T 23-04-2016 NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 Gene3D G3DSA:3.40.630.30 5 148 8.6E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 Pfam PF00535 Glycosyl transferase family 2 172 315 2.5E-21 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS37215 1979b84a7acd373ff31010b500fdba29 440 SUPERFAMILY SSF55729 4 151 3.16E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 Pfam PF05199 GMC oxidoreductase 373 500 6.6E-24 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 Gene3D G3DSA:3.50.50.60 405 506 5.1E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 Gene3D G3DSA:3.50.50.60 15 253 5.1E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 PANTHER PTHR11552 15 500 1.4E-20 T 23-04-2016 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 SUPERFAMILY SSF51905 446 506 5.46E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 SUPERFAMILY SSF51905 13 254 5.46E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS33355 6c694c7428d419e8ba40b0ea0b071a25 512 Pfam PF03486 HI0933-like protein 18 48 1.7E-5 T 23-04-2016 NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 Gene3D G3DSA:3.40.50.300 2 172 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 SUPERFAMILY SSF52540 7 158 9.58E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 PANTHER PTHR11088 3 292 2.6E-82 T 23-04-2016 NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 Pfam PF01715 IPP transferase 39 277 7.4E-66 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 292 25.144 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 Gene3D G3DSA:1.10.287.890 201 276 1.9E-23 T 23-04-2016 NIAKO_RS09800 53c7e01fc932539432ae587a799a6fce 302 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 282 1.1E-76 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NIAKO_RS25485 ea1beea79e442c32d8d2698acad05b5f 141 SUPERFAMILY SSF52172 4 126 3.27E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS25485 ea1beea79e442c32d8d2698acad05b5f 141 PANTHER PTHR26402 3 125 4.3E-27 T 23-04-2016 NIAKO_RS25485 ea1beea79e442c32d8d2698acad05b5f 141 SMART SM00448 3 121 2.7E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25485 ea1beea79e442c32d8d2698acad05b5f 141 Pfam PF00072 Response regulator receiver domain 5 121 2.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25485 ea1beea79e442c32d8d2698acad05b5f 141 Gene3D G3DSA:3.40.50.2300 3 126 9.1E-31 T 23-04-2016 NIAKO_RS04455 3548d2c5e71a84d31de56684997d524a 431 Pfam PF01554 MatE 4 164 1.5E-21 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS04455 3548d2c5e71a84d31de56684997d524a 431 Pfam PF01554 MatE 248 390 3.1E-11 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS04455 3548d2c5e71a84d31de56684997d524a 431 PANTHER PTHR11206:SF175 1 429 1.0E-61 T 23-04-2016 NIAKO_RS04455 3548d2c5e71a84d31de56684997d524a 431 PANTHER PTHR11206 1 429 1.0E-61 T 23-04-2016 NIAKO_RS04455 3548d2c5e71a84d31de56684997d524a 431 PIRSF PIRSF006603 1 431 6.7E-55 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS13910 1c682273c31acf3c8b75566d31837e2f 108 PANTHER PTHR30561:SF0 1 108 9.5E-36 T 23-04-2016 NIAKO_RS13910 1c682273c31acf3c8b75566d31837e2f 108 SUPERFAMILY SSF103481 5 105 7.45E-14 T 23-04-2016 NIAKO_RS13910 1c682273c31acf3c8b75566d31837e2f 108 Pfam PF00893 Small Multidrug Resistance protein 1 95 3.3E-21 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 NIAKO_RS13910 1c682273c31acf3c8b75566d31837e2f 108 PANTHER PTHR30561 1 108 9.5E-36 T 23-04-2016 NIAKO_RS22860 ca034975f567a9fb89e2ee091f2fbf06 172 SUPERFAMILY SSF54637 7 152 5.95E-47 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS22860 ca034975f567a9fb89e2ee091f2fbf06 172 Gene3D G3DSA:3.10.129.10 6 153 4.7E-56 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS22860 ca034975f567a9fb89e2ee091f2fbf06 172 PANTHER PTHR11049 7 152 7.7E-63 T 23-04-2016 NIAKO_RS22860 ca034975f567a9fb89e2ee091f2fbf06 172 Pfam PF03061 Thioesterase superfamily 27 99 2.7E-17 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 PANTHER PTHR10772 9 96 1.7E-42 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 Hamap MF_00580 10 kDa chaperonin [groS]. 9 96 23.71 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 SMART SM00883 9 96 1.0E-52 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 10 34 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 Pfam PF00166 Chaperonin 10 Kd subunit 9 96 1.8E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 PRINTS PR00297 10kDa chaperonin signature 83 96 1.9E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 PRINTS PR00297 10kDa chaperonin signature 32 53 1.9E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 PRINTS PR00297 10kDa chaperonin signature 10 25 1.9E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 PRINTS PR00297 10kDa chaperonin signature 62 74 1.9E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 SUPERFAMILY SSF50129 8 96 2.4E-32 T 23-04-2016 IPR011032 GroES-like NIAKO_RS04975 d151bb959361061d9dcecb65ff15249c 96 Gene3D G3DSA:2.30.33.40 10 96 2.9E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 PANTHER PTHR30572 395 794 6.1E-61 T 23-04-2016 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 PANTHER PTHR30572 280 348 6.1E-61 T 23-04-2016 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 Pfam PF12704 MacB-like periplasmic core domain 20 230 1.1E-18 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 Pfam PF12704 MacB-like periplasmic core domain 469 633 4.5E-6 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 PANTHER PTHR30572:SF4 395 794 6.1E-61 T 23-04-2016 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 PANTHER PTHR30572:SF4 280 348 6.1E-61 T 23-04-2016 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 Pfam PF02687 FtsX-like permease family 281 395 5.1E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS07095 606712c7d0da4dcac03672575f4870ac 794 Pfam PF02687 FtsX-like permease family 675 783 2.9E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS20670 92217a476f3d0f7d1e4ddff737db5835 553 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 230 1.3E-17 T 23-04-2016 NIAKO_RS20670 92217a476f3d0f7d1e4ddff737db5835 553 PANTHER PTHR33908 7 462 2.1E-49 T 23-04-2016 NIAKO_RS20670 92217a476f3d0f7d1e4ddff737db5835 553 PANTHER PTHR33908:SF3 7 462 2.1E-49 T 23-04-2016 NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 Gene3D G3DSA:3.40.50.10540 304 386 1.0E-90 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 Gene3D G3DSA:3.40.50.10540 2 217 1.0E-90 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 PANTHER PTHR24023 24 381 1.6E-54 T 23-04-2016 NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 Gene3D G3DSA:3.30.1540.10 236 303 1.0E-10 T 23-04-2016 NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 Pfam PF02515 CoA-transferase family III 4 371 2.4E-99 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 SUPERFAMILY SSF89796 1 386 2.22E-105 T 23-04-2016 IPR023606 CoA-transferase family III domain NIAKO_RS17855 e8e64b35f142e53d810b94083d3cfdcc 390 PANTHER PTHR24023:SF593 24 381 1.6E-54 T 23-04-2016 NIAKO_RS25200 197e1bcbdbee8dea3ed1e4897fcc5993 295 Pfam PF00582 Universal stress protein family 7 149 1.6E-13 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS25200 197e1bcbdbee8dea3ed1e4897fcc5993 295 Gene3D G3DSA:3.40.50.620 7 142 6.5E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS25200 197e1bcbdbee8dea3ed1e4897fcc5993 295 SUPERFAMILY SSF52402 7 158 6.36E-23 T 23-04-2016 NIAKO_RS25200 197e1bcbdbee8dea3ed1e4897fcc5993 295 PANTHER PTHR31964 7 149 1.2E-13 T 23-04-2016 NIAKO_RS25200 197e1bcbdbee8dea3ed1e4897fcc5993 295 Gene3D G3DSA:3.40.50.620 143 245 8.6E-4 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 PANTHER PTHR30182 3 468 3.4E-198 T 23-04-2016 NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 Pfam PF03313 Serine dehydratase alpha chain 187 465 6.6E-96 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 PANTHER PTHR30182:SF1 3 468 3.4E-198 T 23-04-2016 NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 6 468 1.5E-178 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 Pfam PF03315 Serine dehydratase beta chain 7 159 6.2E-54 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 Gene3D G3DSA:3.30.1330.90 14 161 5.9E-50 T 23-04-2016 IPR029009 Allosteric substrate binding domain NIAKO_RS05030 2a9135e57d47be9bf5520becece09d89 475 SUPERFAMILY SSF143548 20 161 1.99E-43 T 23-04-2016 IPR029009 Allosteric substrate binding domain NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 Gene3D G3DSA:3.10.580.10 6 118 1.7E-18 T 23-04-2016 NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 SMART SM00116 71 119 0.14 T 23-04-2016 IPR000644 CBS domain NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 SMART SM00116 12 59 2.7 T 23-04-2016 IPR000644 CBS domain NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 SUPERFAMILY SSF54631 7 118 5.18E-20 T 23-04-2016 NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 Pfam PF00571 CBS domain 7 56 5.3E-6 T 23-04-2016 IPR000644 CBS domain NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 Pfam PF00571 CBS domain 73 118 2.2E-4 T 23-04-2016 IPR000644 CBS domain NIAKO_RS32420 423ce8701af14ca9198dd2041a366612 221 PANTHER PTHR11911 6 129 6.7E-13 T 23-04-2016 NIAKO_RS21525 f49e8b22995a03a59708804e49e74f05 218 Gene3D G3DSA:3.40.50.1000 68 195 5.6E-38 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21525 f49e8b22995a03a59708804e49e74f05 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 2.6E-29 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS21525 f49e8b22995a03a59708804e49e74f05 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 185 7.0E-18 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS21525 f49e8b22995a03a59708804e49e74f05 218 PANTHER PTHR18901 3 195 1.6E-51 T 23-04-2016 NIAKO_RS21525 f49e8b22995a03a59708804e49e74f05 218 SUPERFAMILY SSF56784 2 194 2.85E-45 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS12375 a6f307fefe981fe87f9d6d1890f82939 203 Gene3D G3DSA:3.40.10.10 68 100 1.2E-4 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NIAKO_RS12195 64894013c40b90f2bc982cbac23a5c15 141 Gene3D G3DSA:3.10.450.50 1 137 5.3E-24 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS12195 64894013c40b90f2bc982cbac23a5c15 141 SUPERFAMILY SSF54427 1 135 8.35E-24 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS12195 64894013c40b90f2bc982cbac23a5c15 141 Pfam PF13577 SnoaL-like domain 2 128 9.6E-22 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS18230 bf628efe27204d6bfb9b7f447967904c 243 SUPERFAMILY SSF49899 66 243 4.41E-40 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS18230 bf628efe27204d6bfb9b7f447967904c 243 Gene3D G3DSA:2.60.120.180 59 243 8.5E-43 T 23-04-2016 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS18230 bf628efe27204d6bfb9b7f447967904c 243 PANTHER PTHR10587 59 142 5.4E-19 T 23-04-2016 NIAKO_RS18230 bf628efe27204d6bfb9b7f447967904c 243 PANTHER PTHR10587:SF81 59 142 5.4E-19 T 23-04-2016 NIAKO_RS18230 bf628efe27204d6bfb9b7f447967904c 243 Pfam PF00457 Glycosyl hydrolases family 11 65 239 1.7E-44 T 23-04-2016 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6784|UniPathway: UPA00114 NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 Pfam PF10162 G8 domain 40 156 1.2E-10 T 23-04-2016 IPR019316 G8 domain NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 Pfam PF07691 PA14 domain 599 738 2.8E-18 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 SUPERFAMILY SSF56988 597 742 2.35E-37 T 23-04-2016 NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 SMART SM00758 596 739 2.3E-15 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 SUPERFAMILY SSF51126 367 494 1.48E-6 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 SUPERFAMILY SSF51126 291 339 1.48E-6 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 SMART SM01225 39 159 0.0024 T 23-04-2016 IPR019316 G8 domain NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 Gene3D G3DSA:2.160.20.10 374 493 2.3E-7 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 Gene3D G3DSA:2.160.20.10 143 331 2.3E-7 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS24390 c65b165943a65d7d20fa3baa2b59c713 744 Gene3D G3DSA:3.90.182.10 597 744 1.3E-37 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS14260 1b24bcf8ed05088154d1d58da20b4c73 323 PANTHER PTHR10366 9 322 9.4E-110 T 23-04-2016 NIAKO_RS14260 1b24bcf8ed05088154d1d58da20b4c73 323 PANTHER PTHR10366:SF267 9 322 9.4E-110 T 23-04-2016 NIAKO_RS14260 1b24bcf8ed05088154d1d58da20b4c73 323 SUPERFAMILY SSF51735 9 321 3.51E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14260 1b24bcf8ed05088154d1d58da20b4c73 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 250 5.5E-23 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS14260 1b24bcf8ed05088154d1d58da20b4c73 323 Gene3D G3DSA:3.40.50.720 9 319 2.4E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 Gene3D G3DSA:1.10.10.60 72 116 2.9E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 PANTHER PTHR11019 7 118 3.4E-16 T 23-04-2016 NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 SUPERFAMILY SSF46689 71 114 1.3E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 Pfam PF12833 Helix-turn-helix domain 34 111 3.5E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 SMART SM00342 28 110 3.8E-7 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS07335 06366b0906c6e3361d7da0be42021caa 120 PANTHER PTHR11019:SF61 7 118 3.4E-16 T 23-04-2016 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 Gene3D G3DSA:2.40.50.100 69 100 5.4E-11 T 23-04-2016 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 Gene3D G3DSA:2.40.50.100 172 198 5.4E-11 T 23-04-2016 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 PANTHER PTHR30097 49 357 1.6E-62 T 23-04-2016 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 SUPERFAMILY SSF111369 65 285 1.7E-20 T 23-04-2016 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 280 2.5E-41 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 350 3.5E-44 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS12080 460cbde83b877b5bbbe6ab33bb388ee8 359 PANTHER PTHR30097:SF4 49 357 1.6E-62 T 23-04-2016 NIAKO_RS31740 b9e18553adec43e0ed5aa6f1340102db 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 1.5E-30 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV NIAKO_RS31740 b9e18553adec43e0ed5aa6f1340102db 115 PANTHER PTHR37309:SF1 1 108 7.8E-30 T 23-04-2016 NIAKO_RS31740 b9e18553adec43e0ed5aa6f1340102db 115 PANTHER PTHR37309 1 108 7.8E-30 T 23-04-2016 NIAKO_RS15595 33b111cfe40fd87514da692ff482bc89 477 Gene3D G3DSA:1.50.10.20 26 382 3.2E-85 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS15595 33b111cfe40fd87514da692ff482bc89 477 SUPERFAMILY SSF81853 26 377 2.35E-59 T 23-04-2016 NIAKO_RS15595 33b111cfe40fd87514da692ff482bc89 477 Pfam PF09492 Pectic acid lyase 116 375 5.8E-20 T 23-04-2016 IPR012669 Pectic acid lyase NIAKO_RS11810 dfdea1458a72144e1699c8c2bd32a064 289 PANTHER PTHR10859 20 275 1.8E-110 T 23-04-2016 NIAKO_RS11810 dfdea1458a72144e1699c8c2bd32a064 289 SUPERFAMILY SSF53448 38 271 1.31E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS11810 dfdea1458a72144e1699c8c2bd32a064 289 Pfam PF00535 Glycosyl transferase family 2 40 211 9.5E-30 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS11810 dfdea1458a72144e1699c8c2bd32a064 289 PANTHER PTHR10859:SF74 20 275 1.8E-110 T 23-04-2016 NIAKO_RS11810 dfdea1458a72144e1699c8c2bd32a064 289 Gene3D G3DSA:3.90.550.10 38 220 5.1E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS02910 607f72e6e255704f411b92314681cc0d 327 PANTHER PTHR11732:SF269 1 317 1.1E-181 T 23-04-2016 NIAKO_RS02910 607f72e6e255704f411b92314681cc0d 327 SUPERFAMILY SSF51430 1 311 1.22E-105 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS02910 607f72e6e255704f411b92314681cc0d 327 Gene3D G3DSA:3.20.20.100 1 320 1.4E-118 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS02910 607f72e6e255704f411b92314681cc0d 327 Pfam PF00248 Aldo/keto reductase family 16 306 2.8E-79 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS02910 607f72e6e255704f411b92314681cc0d 327 PANTHER PTHR11732 1 317 1.1E-181 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 PANTHER PTHR39188 10 331 1.2E-19 T 23-04-2016 NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 SUPERFAMILY SSF54631 235 353 1.89E-13 T 23-04-2016 NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 Pfam PF02163 Peptidase family M50 48 116 3.1E-7 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 Pfam PF02163 Peptidase family M50 139 191 7.8E-7 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 Gene3D G3DSA:3.10.580.10 235 352 4.4E-15 T 23-04-2016 NIAKO_RS09345 f9283e9c8a4bfa5f6ca4d2e3fcc96d68 373 PIRSF PIRSF006404 1 361 4.5E-87 T 23-04-2016 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS NIAKO_RS10895 3654691bf80c9d38e6675531174c8dc1 354 SUPERFAMILY SSF56059 73 165 3.98E-10 T 23-04-2016 NIAKO_RS10895 3654691bf80c9d38e6675531174c8dc1 354 SUPERFAMILY SSF56059 225 287 3.98E-10 T 23-04-2016 NIAKO_RS10895 3654691bf80c9d38e6675531174c8dc1 354 Gene3D G3DSA:3.30.1490.20 100 135 6.3E-5 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 SMART SM00631 58 367 0.002 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 Gene3D G3DSA:3.40.630.10 56 324 1.6E-35 T 23-04-2016 NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 SUPERFAMILY SSF52317 625 854 2.52E-9 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 Pfam PF00246 Zinc carboxypeptidase 65 306 8.5E-22 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 SUPERFAMILY SSF53187 49 101 9.26E-57 T 23-04-2016 NIAKO_RS24795 e137e1741228fe1029c889a247b07a6d 868 SUPERFAMILY SSF53187 128 345 9.26E-57 T 23-04-2016 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 Pfam PF00892 EamA-like transporter family 4 136 1.3E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 Pfam PF00892 EamA-like transporter family 149 283 8.5E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 PANTHER PTHR22911 3 284 7.8E-55 T 23-04-2016 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 PANTHER PTHR22911:SF68 3 284 7.8E-55 T 23-04-2016 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 SUPERFAMILY SSF103481 207 287 7.06E-11 T 23-04-2016 NIAKO_RS01270 972404c2646c74fa264009a2267b2350 289 SUPERFAMILY SSF103481 42 138 4.45E-11 T 23-04-2016 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 Pfam PF02321 Outer membrane efflux protein 235 422 1.8E-14 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 Pfam PF02321 Outer membrane efflux protein 3 210 2.8E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 Gene3D G3DSA:1.20.1600.10 1 429 3.5E-48 T 23-04-2016 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 PANTHER PTHR30026:SF4 1 429 3.2E-25 T 23-04-2016 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 SUPERFAMILY SSF56954 1 429 1.7E-47 T 23-04-2016 NIAKO_RS03800 2710156fb6c4297e0c140b8564896bd3 439 PANTHER PTHR30026 1 429 3.2E-25 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 SMART SM00642 16 429 7.8E-123 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357:SF142 1 401 2.0E-195 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357:SF142 422 434 2.0E-195 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357:SF142 466 548 2.0E-195 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Pfam PF16657 Maltogenic Amylase, C-terminal domain 490 564 2.9E-7 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 SUPERFAMILY SSF51445 6 487 1.33E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Gene3D G3DSA:3.20.20.80 5 107 3.5E-111 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Gene3D G3DSA:3.20.20.80 179 489 3.5E-111 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Gene3D G3DSA:2.60.40.1180 491 567 1.1E-18 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Pfam PF00128 Alpha amylase, catalytic domain 31 387 1.7E-104 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 SUPERFAMILY SSF51011 490 567 3.84E-15 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 Gene3D G3DSA:3.90.400.10 108 178 7.3E-23 T 23-04-2016 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357 1 401 2.0E-195 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357 422 434 2.0E-195 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18140 8855749ea0c71f28dc33ce84df380888 568 PANTHER PTHR10357 466 548 2.0E-195 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS03155 8bf85e3b0dfb67c54a242330d95954aa 192 Pfam PF00027 Cyclic nucleotide-binding domain 31 116 1.2E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS03155 8bf85e3b0dfb67c54a242330d95954aa 192 PANTHER PTHR24567:SF33 29 189 1.7E-23 T 23-04-2016 NIAKO_RS03155 8bf85e3b0dfb67c54a242330d95954aa 192 PANTHER PTHR24567 29 189 1.7E-23 T 23-04-2016 NIAKO_RS03155 8bf85e3b0dfb67c54a242330d95954aa 192 Gene3D G3DSA:2.60.120.10 4 155 8.8E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS03155 8bf85e3b0dfb67c54a242330d95954aa 192 SUPERFAMILY SSF51206 15 139 4.84E-15 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS16995 e1e285208a76d795046c7f85b257a3f1 732 Gene3D G3DSA:3.20.20.70 371 629 5.8E-9 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS16995 e1e285208a76d795046c7f85b257a3f1 732 SUPERFAMILY SSF51445 375 584 5.79E-13 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS16995 e1e285208a76d795046c7f85b257a3f1 732 Gene3D G3DSA:2.60.40.1180 665 729 3.0E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 193 24.029 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 189 1.7E-45 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 Pfam PF02545 Maf-like protein 5 191 3.3E-54 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 Gene3D G3DSA:3.90.950.10 5 192 5.1E-61 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 SUPERFAMILY SSF52972 3 191 5.69E-57 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NIAKO_RS08005 b4963b9ce621467976c85ec1dd0ab41b 193 PIRSF PIRSF006305 1 193 1.4E-56 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 NIAKO_RS32015 e9c0605ff30462827779389d6e014537 112 SMART SM00360 2 75 8.6E-29 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS32015 e9c0605ff30462827779389d6e014537 112 Gene3D G3DSA:3.30.70.330 2 96 2.0E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS32015 e9c0605ff30462827779389d6e014537 112 PANTHER PTHR24012 1 101 1.7E-31 T 23-04-2016 NIAKO_RS32015 e9c0605ff30462827779389d6e014537 112 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 8.1E-24 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS32015 e9c0605ff30462827779389d6e014537 112 SUPERFAMILY SSF54928 2 106 8.51E-35 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 Gene3D G3DSA:3.40.30.10 2 94 2.3E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 Pfam PF10262 Rdx family 4 78 2.7E-25 T 23-04-2016 IPR011893 Selenoprotein, Rdx type NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 PANTHER PTHR36417:SF2 2 95 4.7E-27 T 23-04-2016 NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 SUPERFAMILY SSF52833 1 87 8.05E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 PANTHER PTHR36417 2 95 4.7E-27 T 23-04-2016 NIAKO_RS26130 4ab4783f79602eaa72ec64a1612a9aef 95 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 5 77 2.2E-14 T 23-04-2016 IPR011893 Selenoprotein, Rdx type NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 PANTHER PTHR11918:SF64 70 397 2.0E-49 T 23-04-2016 NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 Pfam PF04055 Radical SAM superfamily 199 352 3.7E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 SUPERFAMILY SSF102114 159 397 2.49E-24 T 23-04-2016 NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 SMART SM00729 190 411 1.4E-14 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 Gene3D G3DSA:3.80.30.20 195 393 3.6E-26 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 Pfam PF02310 B12 binding domain 19 126 1.5E-9 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS21255 b38433de0c52e01d6754f0e3f3fed2d9 499 PANTHER PTHR11918 70 397 2.0E-49 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NIAKO_RS26275 310ba59c25cd7b586f6d020052e2d4a0 261 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 80 217 5.1E-25 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS26275 310ba59c25cd7b586f6d020052e2d4a0 261 Gene3D G3DSA:3.40.50.150 77 216 2.8E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS26275 310ba59c25cd7b586f6d020052e2d4a0 261 SUPERFAMILY SSF53335 36 241 1.9E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS26275 310ba59c25cd7b586f6d020052e2d4a0 261 Pfam PF05050 Methyltransferase FkbM domain 83 219 3.2E-14 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 205 387 1.2E-8 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 PANTHER PTHR31321:SF29 305 396 7.9E-29 T 23-04-2016 NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 PANTHER PTHR31321 305 396 7.9E-29 T 23-04-2016 NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 SUPERFAMILY SSF49785 165 188 1.19E-26 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 SUPERFAMILY SSF49785 23 135 1.19E-26 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 SUPERFAMILY SSF52266 192 412 3.16E-44 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 Gene3D G3DSA:2.60.120.360 19 192 5.8E-34 T 23-04-2016 NIAKO_RS17975 5fbcab24b4acaee7a4119938206a60b3 444 Gene3D G3DSA:3.40.50.1110 193 415 8.4E-67 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS25730 48e667f1623f55a0aeaaab14cb4f7863 611 PANTHER PTHR11819 602 608 2.9E-45 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS25730 48e667f1623f55a0aeaaab14cb4f7863 611 PANTHER PTHR11819 4 562 2.9E-45 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS25730 48e667f1623f55a0aeaaab14cb4f7863 611 PANTHER PTHR11819:SF77 602 608 2.9E-45 T 23-04-2016 NIAKO_RS25730 48e667f1623f55a0aeaaab14cb4f7863 611 PANTHER PTHR11819:SF77 4 562 2.9E-45 T 23-04-2016 NIAKO_RS25730 48e667f1623f55a0aeaaab14cb4f7863 611 Pfam PF00474 Sodium:solute symporter family 36 466 1.4E-29 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS17085 b29a9484b92b69d8856dab5253a2db5d 159 PANTHER PTHR36929:SF1 10 159 4.9E-31 T 23-04-2016 NIAKO_RS17085 b29a9484b92b69d8856dab5253a2db5d 159 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 153 1.1E-23 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS17085 b29a9484b92b69d8856dab5253a2db5d 159 Gene3D G3DSA:3.30.530.20 9 156 9.7E-36 T 23-04-2016 IPR023393 START-like domain NIAKO_RS17085 b29a9484b92b69d8856dab5253a2db5d 159 PANTHER PTHR36929 10 159 4.9E-31 T 23-04-2016 NIAKO_RS17085 b29a9484b92b69d8856dab5253a2db5d 159 SUPERFAMILY SSF55961 9 154 5.5E-36 T 23-04-2016 NIAKO_RS03005 24f9b50791d22de79fd38dd8d4d314c3 345 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 8 239 2.7E-23 T 23-04-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 NIAKO_RS03005 24f9b50791d22de79fd38dd8d4d314c3 345 Gene3D G3DSA:3.40.50.720 6 333 4.5E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS03005 24f9b50791d22de79fd38dd8d4d314c3 345 PANTHER PTHR10366 6 345 2.3E-113 T 23-04-2016 NIAKO_RS03005 24f9b50791d22de79fd38dd8d4d314c3 345 PANTHER PTHR10366:SF267 6 345 2.3E-113 T 23-04-2016 NIAKO_RS03005 24f9b50791d22de79fd38dd8d4d314c3 345 SUPERFAMILY SSF51735 4 336 1.63E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12635 21570de08993af6ae96b854c77391fe8 254 PANTHER PTHR36699 1 247 1.6E-36 T 23-04-2016 NIAKO_RS12635 21570de08993af6ae96b854c77391fe8 254 Pfam PF03734 L,D-transpeptidase catalytic domain 103 185 9.5E-7 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS12635 21570de08993af6ae96b854c77391fe8 254 SUPERFAMILY SSF141523 104 180 3.4E-9 T 23-04-2016 NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 SUPERFAMILY SSF52540 21 253 1.9E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 SMART SM00382 45 235 3.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 PANTHER PTHR24220 22 258 3.5E-100 T 23-04-2016 NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 Pfam PF00005 ABC transporter 36 185 1.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 Gene3D G3DSA:3.40.50.300 20 250 1.3E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 PANTHER PTHR24220:SF567 22 258 3.5E-100 T 23-04-2016 NIAKO_RS09265 c2f81cfd18eeb7c36ab47a0aa42eb760 258 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 Gene3D G3DSA:1.20.1600.10 28 472 1.6E-48 T 23-04-2016 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 PANTHER PTHR30026 20 480 1.6E-65 T 23-04-2016 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 PANTHER PTHR30026:SF7 20 480 1.6E-65 T 23-04-2016 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 Pfam PF02321 Outer membrane efflux protein 287 472 2.5E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 Pfam PF02321 Outer membrane efflux protein 116 264 4.0E-15 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 SUPERFAMILY SSF56954 5 81 6.02E-55 T 23-04-2016 NIAKO_RS19820 5f369dd5e8fedbd9a764dc1f232f3deb 486 SUPERFAMILY SSF56954 130 472 6.02E-55 T 23-04-2016 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 Pfam PF04397 LytTr DNA-binding domain 145 231 5.2E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 Gene3D G3DSA:2.40.50.40 136 204 1.2E-19 T 23-04-2016 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 PANTHER PTHR26402 3 134 7.0E-31 T 23-04-2016 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 Gene3D G3DSA:3.40.50.2300 2 125 2.1E-29 T 23-04-2016 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 Pfam PF00072 Response regulator receiver domain 6 111 4.5E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 SMART SM00850 144 235 1.1E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 SMART SM00448 3 111 6.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS33475 8458f412695041b5706f89d8fe96e673 239 SUPERFAMILY SSF52172 3 165 2.99E-30 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15900 7602e77608f872a44298f6bdb4dd740e 429 Gene3D G3DSA:3.40.630.30 139 264 8.0E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS15900 7602e77608f872a44298f6bdb4dd740e 429 Gene3D G3DSA:1.25.40.20 276 422 3.7E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS15900 7602e77608f872a44298f6bdb4dd740e 429 Pfam PF00583 Acetyltransferase (GNAT) family 181 253 8.3E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS15900 7602e77608f872a44298f6bdb4dd740e 429 SUPERFAMILY SSF55729 166 280 6.35E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS15900 7602e77608f872a44298f6bdb4dd740e 429 SUPERFAMILY SSF48403 258 423 3.26E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS05025 4aa4b96172494dd97adb574dee1d32f7 162 PANTHER PTHR10516 58 158 3.1E-13 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NIAKO_RS05025 4aa4b96172494dd97adb574dee1d32f7 162 SUPERFAMILY SSF54534 29 161 1.43E-23 T 23-04-2016 NIAKO_RS05025 4aa4b96172494dd97adb574dee1d32f7 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 77 158 4.1E-15 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NIAKO_RS05025 4aa4b96172494dd97adb574dee1d32f7 162 PANTHER PTHR10516:SF320 58 158 3.1E-13 T 23-04-2016 NIAKO_RS05025 4aa4b96172494dd97adb574dee1d32f7 162 Gene3D G3DSA:3.10.50.40 37 161 2.1E-27 T 23-04-2016 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 Gene3D G3DSA:3.30.70.330 2 99 4.9E-30 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 SUPERFAMILY SSF54189 3 98 6.47E-26 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 Pfam PF00276 Ribosomal protein L23 5 95 1.3E-28 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 98 20.695 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 PANTHER PTHR11620 6 61 1.3E-20 T 23-04-2016 NIAKO_RS22990 d6e2a186f276a0a56c4cf5c31bfc5f59 99 PANTHER PTHR11620 79 99 1.3E-20 T 23-04-2016 NIAKO_RS30240 291696dbba1885cdf036390c170c0e1c 426 Pfam PF07805 HipA-like N-terminal domain 188 259 2.8E-9 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 NIAKO_RS30240 291696dbba1885cdf036390c170c0e1c 426 Pfam PF07804 HipA-like C-terminal domain 264 403 2.8E-31 T 23-04-2016 IPR012893 HipA-like, C-terminal NIAKO_RS20005 2c42cf406d5e9541f9798e6ded5e9a67 237 Gene3D G3DSA:1.20.120.520 51 202 3.3E-15 T 23-04-2016 NIAKO_RS20005 2c42cf406d5e9541f9798e6ded5e9a67 237 PANTHER PTHR39966 39 233 1.1E-27 T 23-04-2016 NIAKO_RS20005 2c42cf406d5e9541f9798e6ded5e9a67 237 Pfam PF01814 Hemerythrin HHE cation binding domain 51 181 1.6E-11 T 23-04-2016 IPR012312 Haemerythrin-like NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 PANTHER PTHR33751 185 372 5.1E-36 T 23-04-2016 NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 SUPERFAMILY SSF46626 208 362 6.77E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 191 231 6.9E-17 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 PANTHER PTHR33751:SF1 185 372 5.1E-36 T 23-04-2016 NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 276 350 2.9E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS09555 9828db35f338b1d30c0d1e75b00c535e 389 Gene3D G3DSA:1.10.760.10 271 382 4.4E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 SUPERFAMILY SSF51306 126 201 1.1E-6 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 Gene3D G3DSA:2.10.109.10 89 213 9.1E-6 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 ProSitePatterns PS00501 Signal peptidases I serine active site. 131 138 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 Gene3D G3DSA:1.10.260.40 4 52 1.4E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 SUPERFAMILY SSF47413 2 57 5.63E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS01190 dca29e05c3e232c1855758379fde8ebd 219 Pfam PF00717 Peptidase S24-like 128 192 1.8E-4 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS29215 50a873dc98d57f37e2015a694298aec8 107 SUPERFAMILY SSF51306 14 93 1.44E-6 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NIAKO_RS29215 50a873dc98d57f37e2015a694298aec8 107 Pfam PF00717 Peptidase S24-like 23 79 9.2E-7 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B NIAKO_RS29215 50a873dc98d57f37e2015a694298aec8 107 Gene3D G3DSA:2.10.109.10 14 86 2.0E-4 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 Gene3D G3DSA:3.40.50.620 3 121 1.6E-17 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 Gene3D G3DSA:3.40.50.620 122 256 1.9E-7 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 Pfam PF00582 Universal stress protein family 192 256 1.5E-4 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 Pfam PF00582 Universal stress protein family 2 124 2.9E-14 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 SUPERFAMILY SSF52402 6 134 4.27E-18 T 23-04-2016 NIAKO_RS21440 497b211e4a1a0d88d6024b78ae40d871 258 SUPERFAMILY SSF52402 133 257 8.12E-10 T 23-04-2016 NIAKO_RS30620 2ee484b4d47c74e1a88c88943f409569 334 PANTHER PTHR33371 1 148 4.2E-23 T 23-04-2016 NIAKO_RS30620 2ee484b4d47c74e1a88c88943f409569 334 Pfam PF02470 MlaD protein 41 115 1.7E-17 T 23-04-2016 IPR003399 Mce/MlaD NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 3.0E-19 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 76 4.1E-28 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 PANTHER PTHR33383 1 76 5.4E-40 T 23-04-2016 NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 Pfam PF01809 Haemolytic domain 12 75 8.9E-31 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 SMART SM01234 8 75 1.8E-43 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NIAKO_RS32475 3d5a1bce3b0875c3796a8290586924bb 76 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 23.889 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 PANTHER PTHR13932 1 446 5.3E-167 T 23-04-2016 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 PANTHER PTHR13932:SF6 1 446 5.3E-167 T 23-04-2016 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 Gene3D G3DSA:3.80.30.20 52 254 1.2E-27 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 PIRSF PIRSF000167 2 450 2.0E-146 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 SMART SM00729 52 273 2.3E-43 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 455 5.6E-134 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 Pfam PF04055 Radical SAM superfamily 58 228 3.5E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS09525 3edc3792ffdab199efc58abd8dc992a5 455 SUPERFAMILY SSF102114 3 438 7.06E-115 T 23-04-2016 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 4.0E-10 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.9E-19 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 PANTHER PTHR14503 1 46 9.6E-18 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 Pfam PF00468 Ribosomal protein L34 1 44 9.2E-21 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS32465 b0c47652068cee22f7acc0dd3b68944e 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.036 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS09290 6d53ecfc917fbe0f88fccd445040b196 273 SUPERFAMILY SSF52402 150 271 1.59E-10 T 23-04-2016 NIAKO_RS09290 6d53ecfc917fbe0f88fccd445040b196 273 Gene3D G3DSA:3.40.50.620 1 102 9.4E-6 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS09290 6d53ecfc917fbe0f88fccd445040b196 273 SUPERFAMILY SSF52402 1 143 7.37E-7 T 23-04-2016 NIAKO_RS09290 6d53ecfc917fbe0f88fccd445040b196 273 Gene3D G3DSA:3.40.50.620 131 270 5.9E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS15695 4408deeb401731d40199250a2074d23b 176 SUPERFAMILY SSF47240 11 162 4.24E-43 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS15695 4408deeb401731d40199250a2074d23b 176 Pfam PF05974 Domain of unknown function (DUF892) 13 169 9.6E-51 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS15695 4408deeb401731d40199250a2074d23b 176 PANTHER PTHR30565 13 172 9.7E-42 T 23-04-2016 NIAKO_RS15695 4408deeb401731d40199250a2074d23b 176 Gene3D G3DSA:1.20.1260.10 7 171 2.3E-56 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS15695 4408deeb401731d40199250a2074d23b 176 PANTHER PTHR30565:SF2 13 172 9.7E-42 T 23-04-2016 NIAKO_RS09330 7ed6ef185a97ce8126bf4c6f08aca55a 147 SUPERFAMILY SSF52833 17 144 8.62E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS09330 7ed6ef185a97ce8126bf4c6f08aca55a 147 Gene3D G3DSA:3.40.30.10 18 143 1.1E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS09330 7ed6ef185a97ce8126bf4c6f08aca55a 147 Pfam PF13899 Thioredoxin-like 18 114 5.8E-11 T 23-04-2016 NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 SUPERFAMILY SSF52833 233 372 5.96E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 Pfam PF00578 AhpC/TSA family 236 354 7.2E-24 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 PANTHER PTHR13871 247 368 2.7E-26 T 23-04-2016 NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 Gene3D G3DSA:3.40.30.10 232 371 4.4E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 ProSitePatterns PS00194 Thioredoxin family active site. 263 281 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS20120 074869ebe7d38e798719bf7476106d4d 377 Pfam PF14289 Domain of unknown function (DUF4369) 26 122 1.8E-12 T 23-04-2016 IPR025380 Domain of unknown function DUF4369 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 Gene3D G3DSA:3.30.70.1300 53 125 2.9E-6 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 Gene3D G3DSA:3.40.1740.10 126 167 2.9E-23 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 Gene3D G3DSA:3.40.1740.10 4 44 2.9E-23 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 PANTHER PTHR30327 8 167 1.1E-29 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 SUPERFAMILY SSF143456 7 167 7.85E-40 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 PANTHER PTHR30327:SF1 8 167 1.1E-29 T 23-04-2016 NIAKO_RS18375 e1ee4f2cfc6b189a7a14f937b1bfc245 171 Pfam PF02622 Uncharacterized ACR, COG1678 16 167 4.1E-36 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 NIAKO_RS17140 bb5d8827f5864be05a2c26b519c85ade 204 SUPERFAMILY SSF53335 19 173 1.21E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17140 bb5d8827f5864be05a2c26b519c85ade 204 Gene3D G3DSA:3.40.50.150 43 178 9.1E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17140 bb5d8827f5864be05a2c26b519c85ade 204 Pfam PF13847 Methyltransferase domain 54 123 6.1E-11 T 23-04-2016 IPR025714 Methyltransferase domain NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 PANTHER PTHR13799 155 364 4.3E-104 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 PANTHER PTHR13799 1 133 4.3E-104 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 Gene3D G3DSA:3.30.70.830 130 234 3.5E-38 T 23-04-2016 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 PIRSF PIRSF037489 1 364 2.5E-124 T 23-04-2016 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 Gene3D G3DSA:3.40.1390.30 1 113 8.7E-44 T 23-04-2016 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 Gene3D G3DSA:3.40.1390.30 114 129 1.9E-31 T 23-04-2016 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 Gene3D G3DSA:3.40.1390.30 236 324 1.9E-31 T 23-04-2016 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 347 1.2E-72 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 346 2.0E-51 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIAKO_RS26970 71d776bb8ff054d6d021261300694bc6 365 SUPERFAMILY SSF102705 1 363 4.32E-118 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIAKO_RS21260 a21f7febed216abfb8a5fbf9d1ea695d 219 PANTHER PTHR18895 31 197 3.0E-22 T 23-04-2016 NIAKO_RS21260 a21f7febed216abfb8a5fbf9d1ea695d 219 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 130 136 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NIAKO_RS21260 a21f7febed216abfb8a5fbf9d1ea695d 219 Gene3D G3DSA:3.40.50.150 32 209 4.6E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21260 a21f7febed216abfb8a5fbf9d1ea695d 219 Pfam PF05175 Methyltransferase small domain 37 141 2.9E-16 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NIAKO_RS21260 a21f7febed216abfb8a5fbf9d1ea695d 219 SUPERFAMILY SSF53335 26 209 2.15E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 29 178 8.7E-14 T 23-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 SUPERFAMILY SSF48179 283 497 2.82E-35 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 PANTHER PTHR30524 428 498 1.8E-116 T 23-04-2016 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 PANTHER PTHR30524 14 412 1.8E-116 T 23-04-2016 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 473 1.1E-36 T 23-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 Gene3D G3DSA:3.40.50.720 10 262 7.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 PANTHER PTHR30524:SF1 428 498 1.8E-116 T 23-04-2016 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 PANTHER PTHR30524:SF1 14 412 1.8E-116 T 23-04-2016 NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 SUPERFAMILY SSF51735 10 266 3.94E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26030 0c56543b7a514a0ea346ad27abf02fa0 503 Gene3D G3DSA:1.10.1040.10 283 497 6.3E-51 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 PANTHER PTHR33446:SF2 150 250 4.8E-20 T 23-04-2016 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 175 250 9.2E-12 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 173 250 4.3E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 Gene3D G3DSA:3.30.1150.10 142 250 2.0E-9 T 23-04-2016 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 SUPERFAMILY SSF74653 168 248 1.12E-17 T 23-04-2016 NIAKO_RS37260 b10eb1a31524db78557448d01a194c82 253 PANTHER PTHR33446 150 250 4.8E-20 T 23-04-2016 NIAKO_RS18760 dfe01c3fb6b1645c51c9c279882e91a6 563 SUPERFAMILY SSF48452 206 293 1.82E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18760 dfe01c3fb6b1645c51c9c279882e91a6 563 Gene3D G3DSA:1.25.40.10 209 294 3.1E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 SUPERFAMILY SSF82866 810 986 5.1E-37 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 808 974 8.7E-46 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 416 650 1.9E-61 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PRINTS PR01755 Bacterial translocase SecF protein signature 893 911 6.2E-17 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PRINTS PR01755 Bacterial translocase SecF protein signature 711 726 6.2E-17 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PRINTS PR01755 Bacterial translocase SecF protein signature 925 940 6.2E-17 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Gene3D G3DSA:1.20.1640.10 810 987 1.0E-28 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Gene3D G3DSA:1.20.1640.10 474 655 6.8E-26 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Pfam PF07549 SecD/SecF GG Motif 707 733 5.5E-5 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Pfam PF02355 Protein export membrane protein 808 986 4.4E-57 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Pfam PF02355 Protein export membrane protein 493 662 3.6E-20 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 SUPERFAMILY SSF82866 453 661 9.42E-40 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 685 988 25.405 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081 200 259 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081 102 153 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081 382 658 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 104 658 8.1E-106 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 712 977 8.5E-65 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081:SF1 200 259 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081:SF1 102 153 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 PANTHER PTHR30081:SF1 382 658 9.5E-96 T 23-04-2016 NIAKO_RS04925 6992a2813133c97b8217a80ce1a3c4a8 1012 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 670 32.406 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NIAKO_RS28750 82a0cc4cf55f9a596798ad77d6d5e316 1707 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1177 1644 1.6E-70 T 23-04-2016 IPR007452 Translocation and assembly module TamB NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 PANTHER PTHR30469 37 349 2.1E-40 T 23-04-2016 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 324 347 3.4E-6 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 3.4E-6 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 347 3.8E-54 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 SUPERFAMILY SSF111369 54 269 4.05E-19 T 23-04-2016 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 Gene3D G3DSA:2.40.50.100 156 187 1.4E-10 T 23-04-2016 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 Gene3D G3DSA:2.40.50.100 63 95 1.4E-10 T 23-04-2016 NIAKO_RS16355 5f365f290515d942a2c07ee46d85c940 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 233 1.2E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 PANTHER PTHR32347 1 361 1.1E-30 T 23-04-2016 NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 SUPERFAMILY SSF111369 52 99 2.62E-11 T 23-04-2016 NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 SUPERFAMILY SSF111369 128 242 2.62E-11 T 23-04-2016 NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 Pfam PF13437 HlyD family secretion protein 194 287 6.4E-11 T 23-04-2016 NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 Gene3D G3DSA:2.40.50.100 191 222 4.4E-11 T 23-04-2016 NIAKO_RS09370 49b93293551c9a923029cfb71c6465a3 364 Gene3D G3DSA:2.40.50.100 50 77 4.4E-11 T 23-04-2016 NIAKO_RS04310 ecbf625894d1a3f59cc6f67899500349 105 Gene3D G3DSA:2.60.40.1120 27 99 3.4E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS04310 ecbf625894d1a3f59cc6f67899500349 105 SUPERFAMILY SSF49452 23 99 6.47E-6 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 348 2.7E-76 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 Gene3D G3DSA:3.40.50.300 236 345 1.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 Gene3D G3DSA:3.40.50.300 4 172 1.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 344 3.6E-15 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 74.434 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 NIAKO_RS09975 f0cede1289d624be2ae0d8cb47de1e15 360 SUPERFAMILY SSF52540 4 347 9.66E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 136 1.5E-21 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 Gene3D G3DSA:2.40.50.140 2 147 9.9E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 SUPERFAMILY SSF50249 2 147 1.03E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 PIRSF PIRSF002070 1 146 1.8E-20 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 PANTHER PTHR10302 3 144 1.1E-15 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NIAKO_RS24800 cb055b8dc51e8cb47374d8b54da0954b 147 Pfam PF00436 Single-strand binding protein family 2 101 6.9E-20 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 PANTHER PTHR11019:SF115 4 180 2.2E-71 T 23-04-2016 NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 177 9.2E-54 T 23-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 PANTHER PTHR11019 4 180 2.2E-71 T 23-04-2016 NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 SUPERFAMILY SSF52317 8 178 3.2E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 Gene3D G3DSA:3.40.50.880 2 179 2.9E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS18440 66f04c1c299421c714532516ac12d85e 186 Pfam PF01965 DJ-1/PfpI family 9 177 2.3E-57 T 23-04-2016 IPR002818 DJ-1/PfpI NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 Gene3D G3DSA:1.10.287.950 312 509 1.7E-40 T 23-04-2016 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 1.2E-24 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 1.2E-24 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 1.2E-24 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 SMART SM00283 304 537 3.8E-56 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 SMART SM00304 213 265 3.9E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 186 4.4E-10 T 23-04-2016 IPR024478 4HB MCP domain NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 536 8.2E-37 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 Pfam PF00672 HAMP domain 194 261 4.8E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 SUPERFAMILY SSF58104 324 538 2.09E-57 T 23-04-2016 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 SUPERFAMILY SSF58104 233 267 2.09E-57 T 23-04-2016 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 PANTHER PTHR32089 87 247 4.4E-87 T 23-04-2016 NIAKO_RS01220 1d53b18e6368bdb36816d0edc4836561 592 PANTHER PTHR32089 286 540 4.4E-87 T 23-04-2016 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 PANTHER PTHR21235 1 252 2.6E-115 T 23-04-2016 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 Pfam PF00977 Histidine biosynthesis protein 5 234 8.2E-84 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 SUPERFAMILY SSF51366 1 251 1.33E-77 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 PANTHER PTHR21235:SF2 1 252 2.6E-115 T 23-04-2016 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 45.833 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 Gene3D G3DSA:3.20.20.70 4 252 1.1E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01810 79f2177b94638af00dc3597b2e9a441d 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 4.9E-106 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 NIAKO_RS18920 020cbbfcd72567a826b3f0ef77782703 394 SUPERFAMILY SSF56024 178 323 1.22E-10 T 23-04-2016 NIAKO_RS18920 020cbbfcd72567a826b3f0ef77782703 394 Gene3D G3DSA:3.30.870.10 179 323 5.1E-10 T 23-04-2016 NIAKO_RS18920 020cbbfcd72567a826b3f0ef77782703 394 Pfam PF13091 PLD-like domain 201 317 3.1E-8 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 PANTHER PTHR13774 1 263 9.3E-105 T 23-04-2016 NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 PANTHER PTHR13774:SF17 1 263 9.3E-105 T 23-04-2016 NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 5.7E-59 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 SUPERFAMILY SSF54506 1 262 2.77E-79 T 23-04-2016 NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 Gene3D G3DSA:3.10.310.10 1 128 3.5E-44 T 23-04-2016 NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 PIRSF PIRSF016184 1 263 1.5E-57 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 227 3.0E-41 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- NIAKO_RS01440 8edd96dc23fe1e9b7493030a60883480 263 Gene3D G3DSA:3.10.310.10 129 251 3.6E-42 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SMART SM00965 78 129 4.5E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 349 379 8.2E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.170.130.10 230 373 1.4E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532 703 1138 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532 340 528 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532 615 671 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532 146 311 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.40.170.20 954 1001 8.6E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.40.170.20 1044 1123 8.6E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.40.170.20 374 396 8.6E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.40.170.20 460 914 8.6E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Gene3D G3DSA:2.60.40.1120 145 229 3.4E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Pfam PF07715 TonB-dependent Receptor Plug Domain 235 373 1.3E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF49464 145 225 2.09E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF56935 571 914 6.87E-72 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF56935 1058 1122 6.87E-72 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF56935 451 541 6.87E-72 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF56935 969 1011 6.87E-72 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 SUPERFAMILY SSF56935 223 397 6.87E-72 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532:SF57 703 1138 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532:SF57 340 528 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532:SF57 615 671 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 PANTHER PTHR11532:SF57 146 311 3.9E-176 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Pfam PF13715 CarboxypepD_reg-like domain 146 225 5.7E-13 T 23-04-2016 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 145 1139 2.7E-210 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS11845 fd0092896c0e2f3f309bd56abe76f1a8 1140 Pfam PF07660 Secretin and TonB N terminus short domain 78 129 2.7E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS31945 9b7d2dcbe41c3954fb77ac524b034b2d 383 Pfam PF00535 Glycosyl transferase family 2 45 219 5.3E-22 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS31945 9b7d2dcbe41c3954fb77ac524b034b2d 383 PANTHER PTHR22916 11 381 1.5E-17 T 23-04-2016 NIAKO_RS31945 9b7d2dcbe41c3954fb77ac524b034b2d 383 Gene3D G3DSA:3.90.550.10 43 286 1.5E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS31945 9b7d2dcbe41c3954fb77ac524b034b2d 383 SUPERFAMILY SSF53448 42 326 3.84E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366 70 255 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366 272 352 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366 2 53 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 Gene3D G3DSA:3.40.50.720 1 198 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 255 1.0E-52 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366:SF77 70 255 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366:SF77 272 352 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PANTHER PTHR10366:SF77 2 53 5.0E-163 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 4.7E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PRINTS PR01713 Nucleotide sugar epimerase signature 310 327 4.7E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PRINTS PR01713 Nucleotide sugar epimerase signature 271 286 4.7E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.7E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 Gene3D G3DSA:3.90.25.10 199 350 1.2E-28 T 23-04-2016 NIAKO_RS34985 465e055fc193429fa700f3bfeebda92a 358 SUPERFAMILY SSF51735 1 348 1.35E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 PANTHER PTHR23522 1 405 1.3E-219 T 23-04-2016 NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 PANTHER PTHR23522:SF4 1 405 1.3E-219 T 23-04-2016 NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 TIGRFAM TIGR00889 2A0110: nucleoside transporter 2 406 9.2E-165 T 23-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 SUPERFAMILY SSF103473 6 406 5.36E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 Pfam PF03825 Nucleoside H+ symporter 2 403 4.5E-143 T 23-04-2016 NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 Gene3D G3DSA:1.20.1250.20 6 110 2.8E-6 T 23-04-2016 NIAKO_RS05045 535a8f3ce1779d514606a8b0cc1a0b03 414 Gene3D G3DSA:1.20.1250.20 209 407 1.1E-17 T 23-04-2016 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 SUPERFAMILY SSF46785 12 97 8.49E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.7E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.7E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.7E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 Gene3D G3DSA:1.10.10.10 4 99 4.2E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 Pfam PF01022 Bacterial regulatory protein, arsR family 25 70 1.0E-13 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 SMART SM00418 18 93 2.4E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NIAKO_RS20030 4093b83b05ba262ce51270ee9e47f9b5 109 PANTHER PTHR33154 15 109 3.7E-19 T 23-04-2016 NIAKO_RS02020 63dcf4c133f485e2dd8c7ddfff36d305 279 Pfam PF11138 Protein of unknown function (DUF2911) 28 172 1.4E-50 T 23-04-2016 IPR021314 Protein of unknown function DUF2911 NIAKO_RS02020 63dcf4c133f485e2dd8c7ddfff36d305 279 Gene3D G3DSA:1.25.40.10 186 261 9.9E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02020 63dcf4c133f485e2dd8c7ddfff36d305 279 SUPERFAMILY SSF48452 193 261 2.78E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS02020 63dcf4c133f485e2dd8c7ddfff36d305 279 Pfam PF13431 Tetratricopeptide repeat 218 250 1.1E-4 T 23-04-2016 NIAKO_RS36450 430311377e1b193ef1a93b2d315984eb 513 Gene3D G3DSA:3.40.50.1110 172 354 8.5E-22 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS36450 430311377e1b193ef1a93b2d315984eb 513 PANTHER PTHR37834 53 362 3.7E-22 T 23-04-2016 NIAKO_RS36450 430311377e1b193ef1a93b2d315984eb 513 PANTHER PTHR37834:SF2 53 362 3.7E-22 T 23-04-2016 NIAKO_RS36450 430311377e1b193ef1a93b2d315984eb 513 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 172 345 1.9E-19 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS36450 430311377e1b193ef1a93b2d315984eb 513 SUPERFAMILY SSF52266 169 358 9.92E-25 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 Gene3D G3DSA:3.10.560.10 152 237 8.0E-19 T 23-04-2016 NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 Pfam PF02563 Polysaccharide biosynthesis/export protein 53 153 1.0E-19 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 Gene3D G3DSA:3.30.1950.10 60 151 9.5E-19 T 23-04-2016 NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 Pfam PF10531 SLBB domain 157 203 2.8E-7 T 23-04-2016 IPR019554 Soluble ligand binding domain NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 PANTHER PTHR33619 57 76 1.3E-39 T 23-04-2016 NIAKO_RS00375 1cfe52f9e4c55710ac28319e88adb1f0 272 PANTHER PTHR33619 103 257 1.3E-39 T 23-04-2016 NIAKO_RS12150 3d39d3ded157e9636b33a945f978ff8e 164 PANTHER PTHR36929 17 163 5.8E-17 T 23-04-2016 NIAKO_RS12150 3d39d3ded157e9636b33a945f978ff8e 164 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 26 160 2.4E-17 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS12150 3d39d3ded157e9636b33a945f978ff8e 164 Gene3D G3DSA:3.30.530.20 7 163 1.3E-37 T 23-04-2016 IPR023393 START-like domain NIAKO_RS12150 3d39d3ded157e9636b33a945f978ff8e 164 PANTHER PTHR36929:SF1 17 163 5.8E-17 T 23-04-2016 NIAKO_RS12150 3d39d3ded157e9636b33a945f978ff8e 164 SUPERFAMILY SSF55961 15 162 6.55E-34 T 23-04-2016 NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 SUPERFAMILY SSF49299 657 736 4.97E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 SUPERFAMILY SSF49299 395 483 5.1E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 819 905 6.8E-15 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 Gene3D G3DSA:2.60.40.670 394 481 6.5E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 Gene3D G3DSA:2.60.40.670 656 737 3.5E-4 T 23-04-2016 IPR000601 PKD domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 Pfam PF13585 C-terminal domain of CHU protein family 818 902 1.0E-18 T 23-04-2016 NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 SMART SM00089 397 480 0.019 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS09600 2ab96fac512e93b18bb6e6c9cef85a88 905 SMART SM00089 660 737 7.2 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS22400 ce235e29ddcdd0338038ca8f31f62dce 294 SUPERFAMILY SSF103481 200 293 4.97E-6 T 23-04-2016 NIAKO_RS22400 ce235e29ddcdd0338038ca8f31f62dce 294 SUPERFAMILY SSF103481 60 138 9.94E-6 T 23-04-2016 NIAKO_RS07250 5a32329742679f4f4f7e597ddcaad093 334 PIRSF PIRSF026166 3 334 6.3E-87 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter NIAKO_RS07250 5a32329742679f4f4f7e597ddcaad093 334 PANTHER PTHR18640 4 329 3.1E-65 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter NIAKO_RS07250 5a32329742679f4f4f7e597ddcaad093 334 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 15 328 5.6E-88 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Gene3D G3DSA:1.10.3090.10 74 252 2.4E-57 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Gene3D G3DSA:1.10.3090.10 321 349 2.4E-57 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 SUPERFAMILY SSF81301 8 73 1.2E-16 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 TIGRFAM TIGR00277 HDIG: HDIG domain 194 238 2.1E-7 T 23-04-2016 IPR006675 HDIG domain NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 SUPERFAMILY SSF81891 74 381 1.44E-62 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 PANTHER PTHR13734 8 387 4.6E-83 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Pfam PF01743 Poly A polymerase head domain 8 75 6.0E-13 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Pfam PF01966 HD domain 180 298 1.2E-13 T 23-04-2016 IPR006674 HD domain NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 PANTHER PTHR13734:SF5 8 387 4.6E-83 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Gene3D G3DSA:3.30.460.10 7 71 1.1E-18 T 23-04-2016 NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 103 162 3.7E-21 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NIAKO_RS09790 eefdde533910d8aa1c67e6ddde4f5b5b 396 SMART SM00471 175 299 4.3E-4 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS18330 5de92067bdcd3c0a30771d185aac52ba 495 SUPERFAMILY SSF48452 17 494 8.22E-81 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18330 5de92067bdcd3c0a30771d185aac52ba 495 Gene3D G3DSA:1.25.40.10 216 304 3.2E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18330 5de92067bdcd3c0a30771d185aac52ba 495 Gene3D G3DSA:1.25.40.10 352 436 3.2E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18330 5de92067bdcd3c0a30771d185aac52ba 495 Pfam PF14322 Starch-binding associating with outer membrane 67 236 4.2E-25 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-17 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-17 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.7E-17 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 Pfam PF00206 Lyase 10 300 6.9E-51 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 430 29.993 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PANTHER PTHR11444:SF3 2 389 9.3E-123 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 3.7E-36 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 3.7E-36 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 3.7E-36 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 3.7E-36 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 3.7E-36 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 SUPERFAMILY SSF48557 11 392 1.05E-98 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 Gene3D G3DSA:1.10.275.10 1 107 1.3E-30 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 TIGRFAM TIGR00838 argH: argininosuccinate lyase 13 396 3.2E-107 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 Gene3D G3DSA:1.20.200.10 108 386 3.5E-69 T 23-04-2016 NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 PANTHER PTHR11444 2 389 9.3E-123 T 23-04-2016 IPR000362 Fumarate lyase family NIAKO_RS28045 ff56b18d0c6c9b6f22fc608b7630a67a 432 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 Gene3D G3DSA:3.40.50.720 31 169 4.3E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 Gene3D G3DSA:3.30.360.10 170 387 4.8E-29 T 23-04-2016 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 169 270 9.8E-9 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 PANTHER PTHR22604:SF101 1 267 2.9E-67 T 23-04-2016 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 PANTHER PTHR22604 1 267 2.9E-67 T 23-04-2016 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 SUPERFAMILY SSF55347 163 323 4.25E-25 T 23-04-2016 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 34 157 1.4E-19 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS25210 9788473eddfd66904c4422db8f58dbfe 401 SUPERFAMILY SSF51735 29 189 2.45E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 SUPERFAMILY SSF51735 294 329 4.45E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 SUPERFAMILY SSF51735 4 266 4.45E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 PANTHER PTHR10366:SF124 294 318 2.5E-56 T 23-04-2016 NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 PANTHER PTHR10366:SF124 4 276 2.5E-56 T 23-04-2016 NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 Gene3D G3DSA:3.40.50.720 4 320 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 222 2.9E-32 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 PANTHER PTHR10366 294 318 2.5E-56 T 23-04-2016 NIAKO_RS32640 e5018facfa309316455c74510231e6bd 332 PANTHER PTHR10366 4 276 2.5E-56 T 23-04-2016 NIAKO_RS30515 16511a8b45c9893274a5ce60c29ce6c5 199 PANTHER PTHR13061 1 170 3.9E-48 T 23-04-2016 NIAKO_RS30515 16511a8b45c9893274a5ce60c29ce6c5 199 SUPERFAMILY SSF51161 2 164 3.05E-45 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS30515 16511a8b45c9893274a5ce60c29ce6c5 199 Gene3D G3DSA:2.160.10.10 11 166 4.2E-43 T 23-04-2016 NIAKO_RS30515 16511a8b45c9893274a5ce60c29ce6c5 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 9.3E-9 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS30515 16511a8b45c9893274a5ce60c29ce6c5 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 1.4E-6 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 Gene3D G3DSA:2.170.130.10 130 248 2.4E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 SUPERFAMILY SSF56935 121 781 8.42E-97 T 23-04-2016 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 PANTHER PTHR32552 119 781 1.1E-38 T 23-04-2016 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 Gene3D G3DSA:2.40.170.20 249 781 1.2E-70 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 246 1.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 Pfam PF13715 CarboxypepD_reg-like domain 49 130 5.4E-17 T 23-04-2016 NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 SUPERFAMILY SSF49464 47 127 2.88E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17620 0c7fd7f73d30987f212da143feb5e5d2 784 Gene3D G3DSA:2.60.40.1120 49 129 2.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10660 24d91dec78a26e9225b474e46193b8cf 451 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 355 445 6.3E-10 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NIAKO_RS10660 24d91dec78a26e9225b474e46193b8cf 451 Pfam PF01943 Polysaccharide biosynthesis protein 25 297 1.9E-6 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS27460 c3523e636bb23e72d5f330b99d4a9ba8 242 PANTHER PTHR33321:SF2 69 234 2.9E-18 T 23-04-2016 NIAKO_RS27460 c3523e636bb23e72d5f330b99d4a9ba8 242 PANTHER PTHR33321 69 234 2.9E-18 T 23-04-2016 NIAKO_RS27460 c3523e636bb23e72d5f330b99d4a9ba8 242 Pfam PF04450 Peptidase of plants and bacteria 89 234 1.6E-24 T 23-04-2016 IPR007541 Uncharacterised protein family, basic secretory protein NIAKO_RS09080 430b05c29bc0c83039eb962e12046c58 142 Pfam PF00072 Response regulator receiver domain 7 123 8.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09080 430b05c29bc0c83039eb962e12046c58 142 SUPERFAMILY SSF52172 6 129 9.96E-26 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS09080 430b05c29bc0c83039eb962e12046c58 142 SMART SM00448 5 124 4.7E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS09080 430b05c29bc0c83039eb962e12046c58 142 Gene3D G3DSA:3.40.50.2300 6 129 8.6E-25 T 23-04-2016 NIAKO_RS09080 430b05c29bc0c83039eb962e12046c58 142 PANTHER PTHR26402 5 128 1.5E-21 T 23-04-2016 NIAKO_RS19145 051002c65afdd4a989bce7a7dd6e0ccb 965 Gene3D G3DSA:3.30.379.10 37 155 1.0E-10 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS19145 051002c65afdd4a989bce7a7dd6e0ccb 965 PANTHER PTHR37842:SF1 65 950 1.1E-235 T 23-04-2016 NIAKO_RS19145 051002c65afdd4a989bce7a7dd6e0ccb 965 PANTHER PTHR37842 65 950 1.1E-235 T 23-04-2016 NIAKO_RS19145 051002c65afdd4a989bce7a7dd6e0ccb 965 Pfam PF15979 Glycosyl hydrolase family 115 174 511 2.2E-124 T 23-04-2016 IPR031924 Glycosyl hydrolase family 115 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 SUPERFAMILY SSF48371 138 230 1.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 SUPERFAMILY SSF48371 674 718 1.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 SUPERFAMILY SSF48371 748 907 1.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 SUPERFAMILY SSF48371 276 310 1.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 SUPERFAMILY SSF48371 955 1019 1.88E-11 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 Gene3D G3DSA:1.25.10.10 745 817 1.4E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 Gene3D G3DSA:1.25.10.10 921 1018 1.4E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 Gene3D G3DSA:1.25.10.10 144 189 1.4E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS29840 5b7b371b960fe01c3bccac24ad9ac8a8 1105 Gene3D G3DSA:2.20.140.10 9 81 2.8E-8 T 23-04-2016 IPR008893 WGR domain NIAKO_RS25635 43306fe1b3e98610200e5c9e18d42b6e 346 PIRSF PIRSF018266 1 346 4.3E-40 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS25635 43306fe1b3e98610200e5c9e18d42b6e 346 Pfam PF04773 FecR protein 134 220 3.3E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS25635 43306fe1b3e98610200e5c9e18d42b6e 346 PANTHER PTHR30273 1 346 5.3E-39 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS25635 43306fe1b3e98610200e5c9e18d42b6e 346 Pfam PF16344 Domain of unknown function (DUF4974) 237 341 7.6E-13 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS25635 43306fe1b3e98610200e5c9e18d42b6e 346 PANTHER PTHR30273:SF2 1 346 5.3E-39 T 23-04-2016 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Gene3D G3DSA:2.30.30.30 119 195 5.3E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 SMART SM01383 42 118 1.1E-40 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 PANTHER PTHR13691 1 279 5.0E-124 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.5E-115 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 PIRSF PIRSF002158 4 275 3.7E-89 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 2.6E-52 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 SMART SM01382 124 251 3.5E-83 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 SUPERFAMILY SSF50104 126 269 3.79E-55 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 42.427 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 SUPERFAMILY SSF50249 2 120 2.91E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-29 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Gene3D G3DSA:2.40.50.140 1 113 7.0E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS22985 e8f11ff1222e430de7ce57919b768ed9 279 Gene3D G3DSA:4.10.950.10 196 272 4.8E-30 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 219 4.1E-39 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 PANTHER PTHR21091 8 242 5.8E-57 T 23-04-2016 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 PANTHER PTHR21091:SF16 8 242 5.8E-57 T 23-04-2016 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 Gene3D G3DSA:3.30.950.10 126 256 1.7E-35 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 90 123 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 SUPERFAMILY SSF53790 3 256 1.27E-60 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 245 2.4E-75 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NIAKO_RS34360 921d9131425f64d2b0b6a0e140f16f05 287 Gene3D G3DSA:3.40.1010.10 8 125 4.6E-34 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NIAKO_RS21985 b982556cbfe29a92e6971d9b634226bf 261 SUPERFAMILY SSF49452 181 256 1.02E-5 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS21985 b982556cbfe29a92e6971d9b634226bf 261 Gene3D G3DSA:2.60.40.1120 206 256 2.5E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS21985 b982556cbfe29a92e6971d9b634226bf 261 Pfam PF14321 Domain of unknown function (DUF4382) 31 170 4.0E-33 T 23-04-2016 IPR025491 Domain of unknown function DUF4382 NIAKO_RS33470 bafd63c1695e20cbe56c191d27e748f8 344 Gene3D G3DSA:3.30.565.10 205 290 2.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS33470 bafd63c1695e20cbe56c191d27e748f8 344 PANTHER PTHR34220 13 341 1.5E-55 T 23-04-2016 NIAKO_RS33470 bafd63c1695e20cbe56c191d27e748f8 344 Pfam PF06580 Histidine kinase 154 233 5.6E-25 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS05575 713f9a8a7042fcf9ff19dbdc70d46587 400 Pfam PF12094 Protein of unknown function (DUF3570) 114 385 5.7E-24 T 23-04-2016 IPR021953 Protein of unknown function DUF3570 NIAKO_RS01045 dc1251e1fc556e4dc3da12223e6ccf30 852 PANTHER PTHR30287 12 852 5.9E-106 T 23-04-2016 NIAKO_RS01045 dc1251e1fc556e4dc3da12223e6ccf30 852 Pfam PF12704 MacB-like periplasmic core domain 33 204 3.2E-14 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS01045 dc1251e1fc556e4dc3da12223e6ccf30 852 ProSitePatterns PS00761 Signal peptidases I signature 3. 49 62 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 NIAKO_RS01045 dc1251e1fc556e4dc3da12223e6ccf30 852 Pfam PF02687 FtsX-like permease family 730 844 1.1E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS01045 dc1251e1fc556e4dc3da12223e6ccf30 852 Pfam PF02687 FtsX-like permease family 270 389 1.0E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS37350 1da5f783cc5c6d56785a20fa6d6992a4 318 PANTHER PTHR30373:SF2 33 318 1.2E-27 T 23-04-2016 NIAKO_RS37350 1da5f783cc5c6d56785a20fa6d6992a4 318 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 156 4.4E-34 T 23-04-2016 IPR007621 TPM domain NIAKO_RS37350 1da5f783cc5c6d56785a20fa6d6992a4 318 PANTHER PTHR30373 33 318 1.2E-27 T 23-04-2016 NIAKO_RS13510 40e66a6e4690c2789720bfea518f970a 196 PANTHER PTHR24421 11 188 6.0E-28 T 23-04-2016 NIAKO_RS13510 40e66a6e4690c2789720bfea518f970a 196 PANTHER PTHR24421:SF16 11 188 6.0E-28 T 23-04-2016 NIAKO_RS13510 40e66a6e4690c2789720bfea518f970a 196 Pfam PF01339 CheB methylesterase 12 188 5.7E-50 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS13510 40e66a6e4690c2789720bfea518f970a 196 Gene3D G3DSA:3.40.50.180 7 192 1.6E-56 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS13510 40e66a6e4690c2789720bfea518f970a 196 SUPERFAMILY SSF52738 10 192 3.66E-48 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NIAKO_RS28155 7ee6061f3a442a9b03f4a31f29f401f7 176 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 143 9.3E-37 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 NIAKO_RS28155 7ee6061f3a442a9b03f4a31f29f401f7 176 PIRSF PIRSF004638 1 147 1.7E-38 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 NIAKO_RS28155 7ee6061f3a442a9b03f4a31f29f401f7 176 PANTHER PTHR40255 1 173 1.6E-34 T 23-04-2016 NIAKO_RS20515 45295e816c22f93f3391aff65eff1606 320 SUPERFAMILY SSF51445 7 317 2.58E-80 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS20515 45295e816c22f93f3391aff65eff1606 320 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 36 278 4.5E-51 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS20515 45295e816c22f93f3391aff65eff1606 320 Gene3D G3DSA:3.20.20.80 21 313 5.0E-91 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS31505 a45342ef7e393d7a71276cebd1a59ee5 198 SMART SM00860 59 182 4.2E-4 T 23-04-2016 IPR018958 SMI1/KNR4-like domain NIAKO_RS31505 a45342ef7e393d7a71276cebd1a59ee5 198 Gene3D G3DSA:3.40.1580.10 54 188 4.0E-12 T 23-04-2016 IPR018958 SMI1/KNR4-like domain NIAKO_RS31505 a45342ef7e393d7a71276cebd1a59ee5 198 SUPERFAMILY SSF160631 51 181 9.55E-16 T 23-04-2016 NIAKO_RS31505 a45342ef7e393d7a71276cebd1a59ee5 198 Pfam PF14568 SMI1-KNR4 cell-wall 62 178 8.8E-9 T 23-04-2016 NIAKO_RS29220 13bc6c520a7f84ef7ae5a01c2db7ef93 254 Pfam PF10127 Predicted nucleotidyltransferase 1 245 4.1E-68 T 23-04-2016 IPR018775 Nucleotidyltransferase, predicted NIAKO_RS29220 13bc6c520a7f84ef7ae5a01c2db7ef93 254 PANTHER PTHR34817:SF2 1 248 2.8E-60 T 23-04-2016 NIAKO_RS29220 13bc6c520a7f84ef7ae5a01c2db7ef93 254 PANTHER PTHR34817 1 248 2.8E-60 T 23-04-2016 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 SUPERFAMILY SSF56935 121 792 9.52E-55 T 23-04-2016 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Gene3D G3DSA:2.60.40.10 25 89 1.4E-10 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Pfam PF14905 Outer membrane protein beta-barrel family 385 790 1.5E-104 T 23-04-2016 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Gene3D G3DSA:2.170.130.10 124 228 8.1E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Gene3D G3DSA:2.40.170.20 229 792 2.5E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 226 2.4E-5 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 103 9.3E-14 T 23-04-2016 NIAKO_RS10715 25e4b4f411089ec5562a7620b607e16b 819 SUPERFAMILY SSF49452 24 101 5.3E-9 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS28060 db1e0140e815f8258f560eab91c091d7 350 PANTHER PTHR34220 16 350 5.0E-49 T 23-04-2016 NIAKO_RS28060 db1e0140e815f8258f560eab91c091d7 350 Pfam PF06580 Histidine kinase 160 238 2.7E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS28060 db1e0140e815f8258f560eab91c091d7 350 SUPERFAMILY SSF55874 215 325 4.25E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28060 db1e0140e815f8258f560eab91c091d7 350 Gene3D G3DSA:3.30.565.10 208 298 0.001 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS28060 db1e0140e815f8258f560eab91c091d7 350 ProSitePatterns PS01258 Apoptosis regulator, Bcl-2 family BH2 motif signature. 9 20 - T 23-04-2016 IPR020726 Apoptosis regulator, Bcl-2, BH2 motif, conserved site GO:0042981 NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 56 79 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 Pfam PF00294 pfkB family carbohydrate kinase 20 316 6.3E-34 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 SUPERFAMILY SSF53613 20 316 6.86E-43 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 PANTHER PTHR10584 1 322 4.1E-90 T 23-04-2016 NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 Gene3D G3DSA:3.40.1190.20 20 322 3.3E-45 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS24145 000680bc94c088929fa0ea0a87e9687a 332 PANTHER PTHR10584:SF159 1 322 4.1E-90 T 23-04-2016 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 SUPERFAMILY SSF88946 3 100 2.49E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 Gene3D G3DSA:1.10.1740.10 2 102 1.0E-23 T 23-04-2016 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 Gene3D G3DSA:1.10.10.10 110 169 1.3E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 SUPERFAMILY SSF88659 109 170 1.18E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 Pfam PF08281 Sigma-70, region 4 117 168 7.6E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 42 73 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 PANTHER PTHR30173 2 176 1.1E-30 T 23-04-2016 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 Pfam PF04542 Sigma-70 region 2 21 86 1.1E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25470 c7d4361873d9b54c0ec7b49968941008 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 169 7.0E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21905 2365dba4fa1f6838d29f1f9b37fdf6b1 372 Pfam PF12698 ABC-2 family transporter protein 31 360 3.4E-49 T 23-04-2016 NIAKO_RS21905 2365dba4fa1f6838d29f1f9b37fdf6b1 372 PANTHER PTHR30294:SF12 1 371 4.5E-96 T 23-04-2016 NIAKO_RS21905 2365dba4fa1f6838d29f1f9b37fdf6b1 372 PANTHER PTHR30294 1 371 4.5E-96 T 23-04-2016 NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 Gene3D G3DSA:3.90.226.10 3 256 1.3E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 Gene3D G3DSA:3.90.226.10 269 514 8.7E-100 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 Pfam PF01039 Carboxyl transferase domain 28 512 8.3E-198 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 PANTHER PTHR22855 1 514 0.0 T 23-04-2016 NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 SUPERFAMILY SSF52096 267 514 3.52E-86 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 SUPERFAMILY SSF52096 7 255 8.67E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29180 9fe778cc8911bb7bb03b7d55f8efa9b3 514 PANTHER PTHR22855:SF14 1 514 0.0 T 23-04-2016 NIAKO_RS13170 c3d8158ab77945330783324f2a3560cc 448 Pfam PF01569 PAP2 superfamily 316 438 7.2E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13170 c3d8158ab77945330783324f2a3560cc 448 PANTHER PTHR34599 255 446 8.9E-29 T 23-04-2016 NIAKO_RS13170 c3d8158ab77945330783324f2a3560cc 448 PANTHER PTHR34599:SF1 255 446 8.9E-29 T 23-04-2016 NIAKO_RS13170 c3d8158ab77945330783324f2a3560cc 448 SUPERFAMILY SSF48317 174 444 4.19E-38 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS13170 c3d8158ab77945330783324f2a3560cc 448 Gene3D G3DSA:1.10.606.10 173 445 3.9E-74 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 NIAKO_RS15585 f4d561e94e109d18eb33ea19b9c6256a 126 Pfam PF03795 YCII-related domain 6 114 3.1E-9 T 23-04-2016 IPR005545 YCII-related NIAKO_RS15585 f4d561e94e109d18eb33ea19b9c6256a 126 SUPERFAMILY SSF54909 5 114 4.29E-10 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS15585 f4d561e94e109d18eb33ea19b9c6256a 126 Gene3D G3DSA:3.30.70.1060 4 114 1.1E-14 T 23-04-2016 NIAKO_RS36365 c7476b5580d00d2637afa46469480874 550 PANTHER PTHR34220:SF3 334 514 7.3E-38 T 23-04-2016 NIAKO_RS36365 c7476b5580d00d2637afa46469480874 550 Gene3D G3DSA:3.30.565.10 403 544 5.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36365 c7476b5580d00d2637afa46469480874 550 PANTHER PTHR34220 334 514 7.3E-38 T 23-04-2016 NIAKO_RS36365 c7476b5580d00d2637afa46469480874 550 Pfam PF06580 Histidine kinase 354 430 7.1E-21 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36365 c7476b5580d00d2637afa46469480874 550 SUPERFAMILY SSF55874 410 544 4.98E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36210 b1ab5933893173fd52c46a50919cbd22 137 SUPERFAMILY SSF49464 36 114 5.89E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS36210 b1ab5933893173fd52c46a50919cbd22 137 Gene3D G3DSA:2.60.40.1120 36 115 9.7E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS36210 b1ab5933893173fd52c46a50919cbd22 137 Pfam PF13620 Carboxypeptidase regulatory-like domain 36 112 1.0E-13 T 23-04-2016 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 PANTHER PTHR30173 1 178 4.1E-31 T 23-04-2016 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 173 6.2E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 Gene3D G3DSA:1.10.1740.10 13 109 6.0E-16 T 23-04-2016 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 Pfam PF04542 Sigma-70 region 2 30 87 2.6E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 SUPERFAMILY SSF88946 13 102 6.28E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 178 9.8E-39 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 PANTHER PTHR30173:SF20 1 178 4.1E-31 T 23-04-2016 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 SUPERFAMILY SSF88659 114 178 1.11E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 Gene3D G3DSA:1.10.10.10 119 178 3.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02135 5db97e1a27f95b969c32beeab804cd22 189 Pfam PF08281 Sigma-70, region 4 124 171 1.0E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS34065 aba182aa0b61a6e804ff0a2b6e879813 290 PANTHER PTHR37305:SF1 68 289 3.3E-12 T 23-04-2016 NIAKO_RS34065 aba182aa0b61a6e804ff0a2b6e879813 290 Pfam PF12679 ABC-2 family transporter protein 2 288 1.1E-13 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 NIAKO_RS34065 aba182aa0b61a6e804ff0a2b6e879813 290 PANTHER PTHR37305 68 289 3.3E-12 T 23-04-2016 NIAKO_RS07700 4371ee5792c3a6c8123a599f91949b9f 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 67 6.1E-5 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain NIAKO_RS07700 4371ee5792c3a6c8123a599f91949b9f 109 SUPERFAMILY SSF54909 1 97 4.25E-11 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS07700 4371ee5792c3a6c8123a599f91949b9f 109 Gene3D G3DSA:3.30.70.900 9 67 6.6E-8 T 23-04-2016 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 564 632 3.2E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF13432 Tetratricopeptide repeat 46 99 1.7E-7 T 23-04-2016 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF13174 Tetratricopeptide repeat 385 406 0.11 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF13181 Tetratricopeptide repeat 496 528 0.087 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF13181 Tetratricopeptide repeat 597 626 0.023 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SUPERFAMILY SSF48452 135 335 5.37E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 PANTHER PTHR23083 495 638 2.6E-77 T 23-04-2016 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 PANTHER PTHR23083 8 405 2.6E-77 T 23-04-2016 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 241 332 5.8E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 38 151 1.6E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF00515 Tetratricopeptide repeat 306 336 1.7E-9 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 462 563 2.4E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 152 240 1.2E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Gene3D G3DSA:1.25.40.10 333 427 4.6E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SUPERFAMILY SSF48452 293 432 3.41E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 597 630 0.11 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 67 100 0.0049 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 33 66 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 135 168 32.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 169 202 0.0024 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 305 338 1.3E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 564 596 240.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 530 563 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 101 134 210.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 237 270 1.4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 339 372 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 203 236 4.6E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 271 304 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SMART SM00028 496 529 3.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 Pfam PF14559 Tetratricopeptide repeat 180 244 2.8E-8 T 23-04-2016 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SUPERFAMILY SSF48452 40 155 1.14E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS34890 2c8f6b9fe0179e967d11596cbca0759b 640 SUPERFAMILY SSF48452 482 631 1.26E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 PANTHER PTHR10992:SF832 39 261 5.8E-28 T 23-04-2016 NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 SUPERFAMILY SSF53474 160 257 9.04E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 SUPERFAMILY SSF53474 32 130 9.04E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 PANTHER PTHR10992 39 261 5.8E-28 T 23-04-2016 NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 Pfam PF12697 Alpha/beta hydrolase family 41 253 2.8E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS26780 9db169e5c7d78280b249cbbad31dc96a 263 Gene3D G3DSA:3.40.50.1820 39 259 1.8E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS13955 7895fa289f2b53224e17e6c1ac55ecd3 513 PANTHER PTHR35148 315 511 5.9E-65 T 23-04-2016 NIAKO_RS13955 7895fa289f2b53224e17e6c1ac55ecd3 513 PANTHER PTHR35148 1 296 5.9E-65 T 23-04-2016 NIAKO_RS13955 7895fa289f2b53224e17e6c1ac55ecd3 513 SUPERFAMILY SSF48452 20 512 3.03E-116 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13955 7895fa289f2b53224e17e6c1ac55ecd3 513 Pfam PF12771 Starch-binding associating with outer membrane 6 512 1.4E-60 T 23-04-2016 NIAKO_RS09050 7e3055d44aa5c06209ba81dbd82d918a 203 Gene3D G3DSA:2.60.40.10 139 198 2.2E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS09050 7e3055d44aa5c06209ba81dbd82d918a 203 SUPERFAMILY SSF49265 139 198 2.18E-5 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS32035 b166367fb63cac0d284bfcbdf9e03ec0 426 PANTHER PTHR21666:SF221 181 382 1.1E-50 T 23-04-2016 NIAKO_RS32035 b166367fb63cac0d284bfcbdf9e03ec0 426 Gene3D G3DSA:2.70.70.10 243 384 2.0E-43 T 23-04-2016 NIAKO_RS32035 b166367fb63cac0d284bfcbdf9e03ec0 426 PANTHER PTHR21666 181 382 1.1E-50 T 23-04-2016 NIAKO_RS32035 b166367fb63cac0d284bfcbdf9e03ec0 426 SUPERFAMILY SSF51261 139 383 1.36E-59 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS32035 b166367fb63cac0d284bfcbdf9e03ec0 426 Pfam PF01551 Peptidase family M23 288 382 5.3E-31 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 185 1.5E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 SUPERFAMILY SSF88946 1 107 1.12E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 Gene3D G3DSA:1.10.1740.10 3 109 3.2E-25 T 23-04-2016 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 Pfam PF04542 Sigma-70 region 2 28 96 1.7E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 Gene3D G3DSA:1.10.10.10 123 186 2.2E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 PANTHER PTHR30173 2 186 1.2E-36 T 23-04-2016 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 SUPERFAMILY SSF88659 120 186 3.18E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS36175 3b5dbdeb18b47a7e78f316c770a9fcd3 193 Pfam PF08281 Sigma-70, region 4 130 170 1.3E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS00640 f4562a2083bca3266b0c6152eea80407 275 Pfam PF06167 Glucose-regulated metallo-peptidase M90 39 251 1.6E-29 T 23-04-2016 IPR010384 MtfA family NIAKO_RS00640 f4562a2083bca3266b0c6152eea80407 275 PANTHER PTHR30164 1 272 1.1E-23 T 23-04-2016 NIAKO_RS00640 f4562a2083bca3266b0c6152eea80407 275 Gene3D G3DSA:3.40.390.10 49 256 1.3E-22 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS00640 f4562a2083bca3266b0c6152eea80407 275 SUPERFAMILY SSF55486 76 257 5.13E-24 T 23-04-2016 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 1 154 1.8E-38 T 23-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 SUPERFAMILY SSF88946 8 83 3.34E-8 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 PANTHER PTHR30173:SF20 1 168 3.5E-33 T 23-04-2016 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 Gene3D G3DSA:1.10.10.10 94 157 6.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 154 7.7E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 PANTHER PTHR30173 1 168 3.5E-33 T 23-04-2016 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 Gene3D G3DSA:1.10.1740.10 9 93 6.8E-8 T 23-04-2016 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 SUPERFAMILY SSF88659 91 155 2.8E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS25640 183e5af51d541d79f8c827edbe4ee256 174 Pfam PF08281 Sigma-70, region 4 98 148 1.6E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 SUPERFAMILY SSF56281 15 257 2.88E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 SMART SM00849 28 238 1.7E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 PANTHER PTHR11935:SF107 1 187 1.6E-71 T 23-04-2016 NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 PANTHER PTHR11935:SF107 204 273 1.6E-71 T 23-04-2016 NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 Pfam PF00753 Metallo-beta-lactamase superfamily 26 238 4.1E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 PANTHER PTHR11935 1 187 1.6E-71 T 23-04-2016 NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 PANTHER PTHR11935 204 273 1.6E-71 T 23-04-2016 NIAKO_RS04945 139b46f14ac5be815cace4279c7b0b28 320 Gene3D G3DSA:3.60.15.10 8 259 1.6E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS12385 c932477937b9e351a9d2158e5a1a0dbf 113 Pfam PF03795 YCII-related domain 42 111 3.9E-10 T 23-04-2016 IPR005545 YCII-related NIAKO_RS12385 c932477937b9e351a9d2158e5a1a0dbf 113 PANTHER PTHR35174 3 110 4.9E-17 T 23-04-2016 NIAKO_RS12385 c932477937b9e351a9d2158e5a1a0dbf 113 Gene3D G3DSA:3.30.70.1060 1 110 4.2E-23 T 23-04-2016 NIAKO_RS12385 c932477937b9e351a9d2158e5a1a0dbf 113 SUPERFAMILY SSF54909 4 111 2.25E-16 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS21110 d0a7239c440510efba4c361f924a4e25 150 Pfam PF09828 Chromate resistance exported protein 3 135 2.5E-52 T 23-04-2016 IPR018634 Chromate resistance exported protein NIAKO_RS07180 e4f6e91ed8d950f57f159a140c997f30 440 SUPERFAMILY SSF56954 3 439 1.96E-54 T 23-04-2016 NIAKO_RS07180 e4f6e91ed8d950f57f159a140c997f30 440 Gene3D G3DSA:1.20.1600.10 27 435 2.9E-43 T 23-04-2016 NIAKO_RS07180 e4f6e91ed8d950f57f159a140c997f30 440 PANTHER PTHR30026 1 440 3.0E-37 T 23-04-2016 NIAKO_RS07180 e4f6e91ed8d950f57f159a140c997f30 440 Pfam PF02321 Outer membrane efflux protein 32 228 8.8E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS07180 e4f6e91ed8d950f57f159a140c997f30 440 Pfam PF02321 Outer membrane efflux protein 252 424 3.3E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 PANTHER PTHR30465 1 107 2.6E-101 T 23-04-2016 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 PANTHER PTHR30465 147 365 2.6E-101 T 23-04-2016 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 Gene3D G3DSA:1.10.3720.10 156 361 3.8E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 SUPERFAMILY SSF161098 159 351 2.22E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 43 1.4E-10 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 182 361 2.7E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 PANTHER PTHR30465:SF2 1 107 2.6E-101 T 23-04-2016 NIAKO_RS31940 bbfe5693cfc45bcf367672d7b32ee6bb 365 PANTHER PTHR30465:SF2 147 365 2.6E-101 T 23-04-2016 NIAKO_RS10465 13b13498d69f0695374e11349e579cf2 428 Pfam PF07396 Phosphate-selective porin O and P 194 404 5.2E-16 T 23-04-2016 IPR010870 Phosphate-selective porin O/P NIAKO_RS10465 13b13498d69f0695374e11349e579cf2 428 Gene3D G3DSA:2.40.160.10 63 425 2.4E-44 T 23-04-2016 IPR023614 Porin domain NIAKO_RS23610 f3bc69bc4fb3d698b62d059bbc47fd61 124 Gene3D G3DSA:3.10.450.50 6 114 1.2E-11 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS23610 f3bc69bc4fb3d698b62d059bbc47fd61 124 SUPERFAMILY SSF54427 8 120 8.11E-20 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS23610 f3bc69bc4fb3d698b62d059bbc47fd61 124 Pfam PF14534 Domain of unknown function (DUF4440) 9 112 4.3E-8 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 NIAKO_RS10415 37f63369d4df5dd1d79f9ec168efae51 221 SUPERFAMILY SSF56925 27 165 1.07E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS02960 f0f0139a6c8425d51b04d8b8198f858d 251 Pfam PF02678 Pirin 50 118 1.3E-13 T 23-04-2016 IPR003829 Pirin, N-terminal domain NIAKO_RS02960 f0f0139a6c8425d51b04d8b8198f858d 251 PANTHER PTHR13903 42 229 4.1E-22 T 23-04-2016 IPR012093 Pirin NIAKO_RS02960 f0f0139a6c8425d51b04d8b8198f858d 251 Gene3D G3DSA:2.60.120.10 9 229 1.1E-31 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02960 f0f0139a6c8425d51b04d8b8198f858d 251 SUPERFAMILY SSF51182 4 229 1.42E-31 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS21485 61caf312e547c65c4723d68c904fb16f 245 PANTHER PTHR12993 1 204 1.7E-31 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related NIAKO_RS21485 61caf312e547c65c4723d68c904fb16f 245 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 119 3.1E-16 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related NIAKO_RS21485 61caf312e547c65c4723d68c904fb16f 245 Gene3D G3DSA:3.40.50.10320 2 235 3.0E-55 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS21485 61caf312e547c65c4723d68c904fb16f 245 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 2 233 5.6E-86 T 23-04-2016 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 NIAKO_RS21485 61caf312e547c65c4723d68c904fb16f 245 SUPERFAMILY SSF102588 3 232 3.27E-47 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 Pfam PF00155 Aminotransferase class I and II 42 383 3.3E-65 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 SUPERFAMILY SSF53383 5 393 3.86E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 Gene3D G3DSA:3.40.640.10 59 275 4.1E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 PANTHER PTHR13693 1 394 2.0E-255 T 23-04-2016 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 Gene3D G3DSA:3.90.1150.10 276 391 9.5E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 392 52.229 T 23-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 PANTHER PTHR13693:SF60 1 394 2.0E-255 T 23-04-2016 NIAKO_RS32810 81da9aaceba08a2b8fb73d1a48024994 400 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 394 9.8E-204 T 23-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 Gene3D G3DSA:3.20.20.140 375 436 6.6E-96 T 23-04-2016 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 Gene3D G3DSA:3.20.20.140 85 272 6.6E-96 T 23-04-2016 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 PANTHER PTHR22935 352 510 1.3E-33 T 23-04-2016 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 SUPERFAMILY SSF51338 13 71 5.98E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 SUPERFAMILY SSF51338 454 505 5.98E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 PANTHER PTHR22935:SF55 352 510 1.3E-33 T 23-04-2016 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 Pfam PF07969 Amidohydrolase family 59 499 2.3E-27 T 23-04-2016 IPR013108 Amidohydrolase 3 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 Gene3D G3DSA:2.30.40.10 18 84 5.2E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 Gene3D G3DSA:2.30.40.10 437 500 5.7E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 SUPERFAMILY SSF51556 71 280 7.17E-73 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS31770 ced7480b7c1985d011dd9254ceac225b 520 SUPERFAMILY SSF51556 332 454 7.17E-73 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS24955 b4df616226ac9bd6919cd3280f8453e5 137 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 135 5.2E-33 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS24955 b4df616226ac9bd6919cd3280f8453e5 137 PIRSF PIRSF006113 2 137 5.7E-18 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS24955 b4df616226ac9bd6919cd3280f8453e5 137 Gene3D G3DSA:3.30.479.10 3 135 4.9E-43 T 23-04-2016 NIAKO_RS24955 b4df616226ac9bd6919cd3280f8453e5 137 PANTHER PTHR12589 4 135 3.7E-46 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NIAKO_RS24955 b4df616226ac9bd6919cd3280f8453e5 137 SUPERFAMILY SSF55620 4 135 2.17E-43 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 Gene3D G3DSA:3.40.1660.10 6 48 7.9E-62 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 Gene3D G3DSA:3.40.1660.10 258 400 7.9E-62 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 PANTHER PTHR31299 22 416 1.3E-97 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 PANTHER PTHR31299:SF2 22 416 1.3E-97 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 SUPERFAMILY SSF159501 5 400 2.62E-112 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 Gene3D G3DSA:3.30.1870.10 49 130 4.2E-28 T 23-04-2016 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 Pfam PF05139 Erythromycin esterase 47 394 5.1E-110 T 23-04-2016 IPR007815 Erythromycin esterase GO:0046677 NIAKO_RS30330 8322feaf9ec8db969a8f44053672a83a 416 PIRSF PIRSF036794 3 405 4.4E-79 T 23-04-2016 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type NIAKO_RS09810 a18d648621431a2820a9d72f61cc1b54 297 Pfam PF15890 Putative zinc-binding metallo-peptidase 40 282 1.5E-77 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS09810 a18d648621431a2820a9d72f61cc1b54 297 SUPERFAMILY SSF55486 145 231 8.03E-6 T 23-04-2016 NIAKO_RS09810 a18d648621431a2820a9d72f61cc1b54 297 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 42 290 9.2E-78 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 Gene3D G3DSA:2.160.20.10 11 459 2.7E-38 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 489 564 4.5E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 Pfam PF13229 Right handed beta helix region 151 305 2.3E-7 T 23-04-2016 NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 SMART SM00710 221 252 610.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 SMART SM00710 123 157 1900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 SMART SM00710 163 184 13.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 SMART SM00710 185 220 4700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS35315 4d3f41e707464ef841b29721727a6c81 565 SUPERFAMILY SSF51126 11 458 8.44E-40 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS00295 ea0d12406fc58224f658f8f5d85bcd53 470 PANTHER PTHR36120 3 469 9.3E-180 T 23-04-2016 NIAKO_RS00295 ea0d12406fc58224f658f8f5d85bcd53 470 SUPERFAMILY SSF53743 3 323 2.22E-57 T 23-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 NIAKO_RS00295 ea0d12406fc58224f658f8f5d85bcd53 470 PANTHER PTHR36120:SF1 3 469 9.3E-180 T 23-04-2016 NIAKO_RS00295 ea0d12406fc58224f658f8f5d85bcd53 470 Pfam PF02952 L-fucose isomerase, C-terminal domain 341 467 3.2E-27 T 23-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 NIAKO_RS24340 8d4d8ad7a37db6c179389afae027cf54 253 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 46 213 5.0E-12 T 23-04-2016 IPR018713 Domain of unknown function DUF2236 NIAKO_RS17130 ffcf33b009554de361028d098cdb60d7 202 Pfam PF13847 Methyltransferase domain 54 123 2.6E-11 T 23-04-2016 IPR025714 Methyltransferase domain NIAKO_RS17130 ffcf33b009554de361028d098cdb60d7 202 Gene3D G3DSA:3.40.50.150 42 123 4.8E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS17130 ffcf33b009554de361028d098cdb60d7 202 SUPERFAMILY SSF53335 15 177 2.64E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS16645 b0faef6ffa7dee203e79605f06c1990f 109 Gene3D G3DSA:3.40.50.1810 3 80 3.0E-9 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 NIAKO_RS16645 b0faef6ffa7dee203e79605f06c1990f 109 SUPERFAMILY SSF52309 10 60 1.77E-7 T 23-04-2016 NIAKO_RS18310 551e4e7d97b889483bc884d8a06e99ab 396 Gene3D G3DSA:3.90.226.10 167 395 1.0E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18310 551e4e7d97b889483bc884d8a06e99ab 396 SUPERFAMILY SSF52096 24 107 7.79E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18310 551e4e7d97b889483bc884d8a06e99ab 396 SUPERFAMILY SSF52096 151 394 7.79E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS18310 551e4e7d97b889483bc884d8a06e99ab 396 Pfam PF03572 Peptidase family S41 176 368 5.5E-22 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS18310 551e4e7d97b889483bc884d8a06e99ab 396 SMART SM00245 154 369 2.6E-5 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS16025 60d2e61b0ebf3bd425266e61f39ed5df 100 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 17 99 1.7E-11 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS16025 60d2e61b0ebf3bd425266e61f39ed5df 100 SUPERFAMILY SSF69754 1 99 3.27E-17 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS16025 60d2e61b0ebf3bd425266e61f39ed5df 100 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 18 97 1.1E-9 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS16025 60d2e61b0ebf3bd425266e61f39ed5df 100 Gene3D G3DSA:3.30.160.100 1 98 1.8E-17 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NIAKO_RS02175 df9cf524278292c53f48d78ba57c4333 233 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 48 225 7.7E-6 T 23-04-2016 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 PANTHER PTHR30572 402 794 1.3E-68 T 23-04-2016 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 PANTHER PTHR30572 291 357 1.3E-68 T 23-04-2016 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 Pfam PF02687 FtsX-like permease family 674 783 2.0E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 Pfam PF02687 FtsX-like permease family 291 405 8.7E-19 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 PANTHER PTHR30572:SF4 402 794 1.3E-68 T 23-04-2016 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 PANTHER PTHR30572:SF4 291 357 1.3E-68 T 23-04-2016 NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 Pfam PF12704 MacB-like periplasmic core domain 20 242 2.7E-13 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS03975 d29892ae647175164b7c588cf767382e 794 Pfam PF12704 MacB-like periplasmic core domain 434 637 1.1E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 SUPERFAMILY SSF56935 501 858 4.58E-64 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 SUPERFAMILY SSF56935 926 970 4.58E-64 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 SUPERFAMILY SSF56935 149 292 4.58E-64 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 SUPERFAMILY SSF56935 1017 1079 4.58E-64 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 SUPERFAMILY SSF56935 351 448 4.58E-64 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 Gene3D G3DSA:2.60.40.1120 71 130 6.3E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 Pfam PF07715 TonB-dependent Receptor Plug Domain 161 268 1.4E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 245 274 8.5E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 70 1100 3.4E-264 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 Pfam PF13715 CarboxypepD_reg-like domain 71 151 5.2E-11 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 ProSitePatterns PS00018 EF-hand calcium-binding domain. 915 927 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 Gene3D G3DSA:2.170.130.10 149 271 8.6E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 PANTHER PTHR11532 601 1098 8.6E-302 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 PANTHER PTHR11532 33 456 8.6E-302 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 PANTHER PTHR11532:SF57 601 1098 8.6E-302 T 23-04-2016 NIAKO_RS18835 585c11c310de9fcdd3520ac0c8e43f64 1100 PANTHER PTHR11532:SF57 33 456 8.6E-302 T 23-04-2016 NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 314 504 9.5E-43 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 SMART SM00813 314 504 1.2E-76 T 23-04-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55|UniPathway: UPA00667 NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 PANTHER PTHR31776 1 511 2.6E-223 T 23-04-2016 NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 SUPERFAMILY SSF51011 382 511 2.88E-26 T 23-04-2016 NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 SUPERFAMILY SSF51445 33 396 1.01E-94 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS03455 1c974111237f1f42b035523841b8dfec 512 PANTHER PTHR31776:SF2 1 511 2.6E-223 T 23-04-2016 NIAKO_RS21750 4e395d7da3abb5b8e07d0286dcd18c79 175 Gene3D G3DSA:3.40.1280.10 10 173 2.6E-46 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS21750 4e395d7da3abb5b8e07d0286dcd18c79 175 PANTHER PTHR12029 1 172 1.8E-78 T 23-04-2016 NIAKO_RS21750 4e395d7da3abb5b8e07d0286dcd18c79 175 SUPERFAMILY SSF75217 9 173 3.47E-42 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS21750 4e395d7da3abb5b8e07d0286dcd18c79 175 PANTHER PTHR12029:SF60 1 172 1.8E-78 T 23-04-2016 NIAKO_RS21750 4e395d7da3abb5b8e07d0286dcd18c79 175 Pfam PF00588 SpoU rRNA Methylase family 25 168 7.0E-36 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 SMART SM00812 27 390 1.3E-90 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 Pfam PF01120 Alpha-L-fucosidase 33 348 3.2E-77 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 SUPERFAMILY SSF51445 231 351 1.42E-84 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 SUPERFAMILY SSF51445 27 204 1.42E-84 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PANTHER PTHR10030 227 387 1.8E-56 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PANTHER PTHR10030 26 203 1.8E-56 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 Gene3D G3DSA:2.60.40.1180 366 418 1.3E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PRINTS PR00741 Glycosyl hydrolase family 29 signature 144 163 9.5E-17 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PRINTS PR00741 Glycosyl hydrolase family 29 signature 301 322 9.5E-17 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PRINTS PR00741 Glycosyl hydrolase family 29 signature 334 356 9.5E-17 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 PRINTS PR00741 Glycosyl hydrolase family 29 signature 99 115 9.5E-17 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS11955 4cb94e58b75a691346c7f7d874edf603 436 Gene3D G3DSA:3.20.20.80 26 351 6.8E-88 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS29570 2e7a20b2437fe2042a3fcdfaae99d500 579 Pfam PF14461 Prokaryotic E2 family B 53 140 3.6E-9 T 23-04-2016 IPR032701 Prokaryotic E2 family B NIAKO_RS29570 2e7a20b2437fe2042a3fcdfaae99d500 579 Pfam PF00899 ThiF family 312 521 6.2E-20 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NIAKO_RS29570 2e7a20b2437fe2042a3fcdfaae99d500 579 SUPERFAMILY SSF69572 312 520 1.83E-21 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NIAKO_RS29570 2e7a20b2437fe2042a3fcdfaae99d500 579 Gene3D G3DSA:3.40.50.720 508 570 2.7E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29570 2e7a20b2437fe2042a3fcdfaae99d500 579 Gene3D G3DSA:3.40.50.720 310 476 2.7E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS24850 19397f451810919e7f1d00126809fe39 180 Pfam PF07209 Protein of unknown function (DUF1415) 6 170 8.3E-64 T 23-04-2016 IPR009858 Protein of unknown function DUF1415 NIAKO_RS21940 8ee06e45d51bc5fb71edf06dbe4f71cc 385 PANTHER PTHR11056 8 383 1.0E-81 T 23-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NIAKO_RS21940 8ee06e45d51bc5fb71edf06dbe4f71cc 385 SUPERFAMILY SSF51182 8 384 5.63E-91 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS21940 8ee06e45d51bc5fb71edf06dbe4f71cc 385 Gene3D G3DSA:2.60.120.10 86 170 2.8E-10 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS21940 8ee06e45d51bc5fb71edf06dbe4f71cc 385 Pfam PF04209 homogentisate 1,2-dioxygenase 22 384 1.5E-20 T 23-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NIAKO_RS21940 8ee06e45d51bc5fb71edf06dbe4f71cc 385 Gene3D G3DSA:2.60.120.10 226 362 1.2E-39 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS27630 8e625d000179d9dbbafa51fabe936482 386 PANTHER PTHR34219 1 369 2.3E-60 T 23-04-2016 NIAKO_RS27630 8e625d000179d9dbbafa51fabe936482 386 Pfam PF03929 PepSY-associated TM region 9 359 9.3E-60 T 23-04-2016 IPR005625 PepSY-associated TM protein NIAKO_RS20315 9670c286061f13641f382b60fe7f5114 212 Pfam PF01694 Rhomboid family 37 188 6.5E-26 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS20315 9670c286061f13641f382b60fe7f5114 212 PANTHER PTHR22936 1 185 2.3E-21 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NIAKO_RS20315 9670c286061f13641f382b60fe7f5114 212 SUPERFAMILY SSF144091 3 188 1.57E-33 T 23-04-2016 NIAKO_RS20315 9670c286061f13641f382b60fe7f5114 212 Gene3D G3DSA:1.20.1540.10 3 187 3.4E-32 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 Gene3D G3DSA:3.40.50.300 1 217 6.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 PANTHER PTHR24220 3 213 5.6E-56 T 23-04-2016 NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 Pfam PF00005 ABC transporter 19 155 4.1E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 SMART SM00382 26 203 1.7E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 SUPERFAMILY SSF52540 2 218 5.83E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00720 b413e0ed4a7ccb53a30ab2e0eda956c9 277 PANTHER PTHR24220:SF530 3 213 5.6E-56 T 23-04-2016 NIAKO_RS25710 3a7a6cfcb690c5e08dfd8ea499aa046f 311 Pfam PF17134 Domain of unknown function (DUF5109) 190 303 1.1E-55 T 23-04-2016 IPR033402 Domain of unknown function DUF5109 NIAKO_RS25710 3a7a6cfcb690c5e08dfd8ea499aa046f 311 Pfam PF14488 Domain of unknown function (DUF4434) 3 170 5.2E-56 T 23-04-2016 IPR027849 Protein of unknown function DUF4434 NIAKO_RS25710 3a7a6cfcb690c5e08dfd8ea499aa046f 311 Gene3D G3DSA:3.20.20.80 18 180 3.8E-5 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS25710 3a7a6cfcb690c5e08dfd8ea499aa046f 311 SUPERFAMILY SSF51445 13 169 9.64E-7 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15770 f304476e0bd6e757083fb0523a215172 260 Gene3D G3DSA:3.40.390.10 39 252 2.1E-42 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS15770 f304476e0bd6e757083fb0523a215172 260 Pfam PF06167 Glucose-regulated metallo-peptidase M90 21 251 1.7E-58 T 23-04-2016 IPR010384 MtfA family NIAKO_RS15770 f304476e0bd6e757083fb0523a215172 260 SUPERFAMILY SSF55486 50 252 8.79E-40 T 23-04-2016 NIAKO_RS15770 f304476e0bd6e757083fb0523a215172 260 PANTHER PTHR30164 1 256 8.2E-44 T 23-04-2016 NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 Gene3D G3DSA:3.30.420.40 144 302 3.2E-41 T 23-04-2016 NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 SUPERFAMILY SSF53067 6 319 6.49E-55 T 23-04-2016 NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 Pfam PF00480 ROK family 8 317 4.3E-52 T 23-04-2016 IPR000600 ROK family NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 ProSitePatterns PS01125 ROK family signature. 139 166 - T 23-04-2016 IPR000600 ROK family NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 Gene3D G3DSA:3.30.420.40 3 143 4.1E-40 T 23-04-2016 NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 PANTHER PTHR18964 2 319 3.6E-79 T 23-04-2016 NIAKO_RS10610 0b3ff388bd79f21c5028ec905dd9d1dc 326 PANTHER PTHR18964:SF123 2 319 3.6E-79 T 23-04-2016 NIAKO_RS00585 75b6c85bdc7aae473993650dab4d61b2 220 Pfam PF13505 Outer membrane protein beta-barrel domain 6 220 4.2E-19 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS00585 75b6c85bdc7aae473993650dab4d61b2 220 SUPERFAMILY SSF56925 23 99 4.97E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 SMART SM00448 5 113 1.1E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 SUPERFAMILY SSF52172 5 119 6.4E-22 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 PANTHER PTHR26402 5 112 2.3E-24 T 23-04-2016 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 Pfam PF04397 LytTr DNA-binding domain 138 227 5.6E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 Gene3D G3DSA:3.40.50.2300 4 117 1.7E-22 T 23-04-2016 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 Pfam PF00072 Response regulator receiver domain 8 113 3.0E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 Gene3D G3DSA:2.40.50.40 129 196 7.2E-22 T 23-04-2016 NIAKO_RS07810 6e49320bfdf4b4f8c6d77dcd57d4d7e5 236 SMART SM00850 137 229 3.4E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PANTHER PTHR24322 145 176 2.4E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PANTHER PTHR24322 7 129 2.4E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 Gene3D G3DSA:3.40.50.720 2 252 1.7E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 Pfam PF00106 short chain dehydrogenase 3 184 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18985 0e2106706d915591eec2d9f6af6f58f8 271 SUPERFAMILY SSF51735 1 247 1.13E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS29245 a1d6be1e481565314a21dd843e515e09 289 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 31 281 1.3E-21 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29245 a1d6be1e481565314a21dd843e515e09 289 SUPERFAMILY SSF56219 25 175 2.09E-40 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29245 a1d6be1e481565314a21dd843e515e09 289 SUPERFAMILY SSF56219 212 286 2.09E-40 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS29245 a1d6be1e481565314a21dd843e515e09 289 Gene3D G3DSA:3.60.10.10 24 289 6.1E-31 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 SMART SM00850 148 245 3.4E-32 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 Pfam PF04397 LytTr DNA-binding domain 149 244 2.5E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 Gene3D G3DSA:2.40.50.40 139 207 5.0E-24 T 23-04-2016 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 SUPERFAMILY SSF52172 1 122 1.71E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 Pfam PF00072 Response regulator receiver domain 5 110 1.2E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 Gene3D G3DSA:3.40.50.2300 2 126 9.3E-33 T 23-04-2016 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 SMART SM00448 2 110 3.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 PANTHER PTHR26402:SF524 2 119 8.0E-38 T 23-04-2016 NIAKO_RS34525 bb107ca9bf09af895a1cd176496c12aa 246 PANTHER PTHR26402 2 119 8.0E-38 T 23-04-2016 NIAKO_RS16345 1d4687135dc29120898ef7833d125134 138 PANTHER PTHR33204 7 104 1.7E-23 T 23-04-2016 NIAKO_RS16345 1d4687135dc29120898ef7833d125134 138 Gene3D G3DSA:1.10.10.10 3 103 2.2E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16345 1d4687135dc29120898ef7833d125134 138 Pfam PF01638 HxlR-like helix-turn-helix 17 104 3.4E-18 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS16345 1d4687135dc29120898ef7833d125134 138 PANTHER PTHR33204:SF10 7 104 1.7E-23 T 23-04-2016 NIAKO_RS16345 1d4687135dc29120898ef7833d125134 138 SUPERFAMILY SSF46785 2 104 1.42E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS26910 b8d41646531e4aa857fd05e47a337fce 175 Pfam PF06037 Bacterial protein of unknown function (DUF922) 84 148 7.1E-6 T 23-04-2016 IPR010321 Protein of unknown function DUF922 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 7.6E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 7.6E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 Gene3D G3DSA:1.10.10.10 7 80 7.0E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 SUPERFAMILY SSF48008 106 230 2.88E-15 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 SUPERFAMILY SSF46785 14 85 4.79E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 Pfam PF07729 FCD domain 106 224 1.3E-15 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 Gene3D G3DSA:1.20.120.530 105 228 6.3E-16 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 4.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PANTHER PTHR11751 100 122 1.1E-17 T 23-04-2016 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PANTHER PTHR11751 20 84 1.1E-17 T 23-04-2016 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 SMART SM00345 22 81 2.6E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 SMART SM00895 106 226 1.0E-10 T 23-04-2016 IPR011711 GntR, C-terminal NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PANTHER PTHR11751:SF403 100 122 1.1E-17 T 23-04-2016 NIAKO_RS02750 650484eb8311f33b5468a263aee12ade 231 PANTHER PTHR11751:SF403 20 84 1.1E-17 T 23-04-2016 NIAKO_RS29435 14ff73938ecd29a8b6eb3bd189b43c9e 257 Gene3D G3DSA:3.30.1330.60 137 214 2.1E-4 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS24870 f7fdc0f21298e37ea631c674910c6e44 239 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 42 222 8.3E-47 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS24870 f7fdc0f21298e37ea631c674910c6e44 239 PANTHER PTHR39200 1 239 7.0E-34 T 23-04-2016 NIAKO_RS24870 f7fdc0f21298e37ea631c674910c6e44 239 PANTHER PTHR39200:SF1 1 239 7.0E-34 T 23-04-2016 NIAKO_RS36055 a7fbd790c70f32bbfff55b27865a7b9c 267 Pfam PF12730 ABC-2 family transporter protein 4 191 2.4E-8 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 NIAKO_RS36055 a7fbd790c70f32bbfff55b27865a7b9c 267 Gene3D G3DSA:1.10.3720.10 230 260 4.7E-4 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS36055 a7fbd790c70f32bbfff55b27865a7b9c 267 Gene3D G3DSA:1.10.3720.10 78 183 4.7E-4 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS09485 c257f7afacae964108e555f9727dd947 147 Pfam PF07681 DoxX 10 106 6.4E-5 T 23-04-2016 IPR032808 DoxX family NIAKO_RS24740 a3e323da97e60cbe37ccf12350693ca6 146 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 36 142 6.3E-33 T 23-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain NIAKO_RS19460 4bdb63a4ae4346819055d78ba7305bf8 200 SUPERFAMILY SSF55729 32 188 9.0E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS19460 4bdb63a4ae4346819055d78ba7305bf8 200 Gene3D G3DSA:3.40.630.30 32 188 7.5E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS19460 4bdb63a4ae4346819055d78ba7305bf8 200 Pfam PF13523 Acetyltransferase (GNAT) domain 43 156 6.0E-7 T 23-04-2016 NIAKO_RS21765 5d69bf8492cfac4eef042b112f71adc1 395 Pfam PF07786 Protein of unknown function (DUF1624) 10 220 1.5E-18 T 23-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 NIAKO_RS21765 5d69bf8492cfac4eef042b112f71adc1 395 PANTHER PTHR40407 10 395 2.8E-50 T 23-04-2016 NIAKO_RS08315 d7a9476a2f5d8eb5372bf1ddb0a5ac08 170 Pfam PF12867 DinB superfamily 25 161 5.6E-15 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS08315 d7a9476a2f5d8eb5372bf1ddb0a5ac08 170 Gene3D G3DSA:1.20.120.450 10 166 3.8E-27 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS08315 d7a9476a2f5d8eb5372bf1ddb0a5ac08 170 SUPERFAMILY SSF109854 16 168 5.49E-24 T 23-04-2016 NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 Gene3D G3DSA:1.20.1250.20 56 219 6.1E-9 T 23-04-2016 NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 Gene3D G3DSA:1.20.1250.20 245 426 8.1E-14 T 23-04-2016 NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 SUPERFAMILY SSF103473 8 427 1.83E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 Pfam PF11700 Vacuole effluxer Atg22 like 5 144 3.2E-13 T 23-04-2016 IPR024671 Autophagy-related protein 22-like NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 Pfam PF11700 Vacuole effluxer Atg22 like 148 425 1.1E-43 T 23-04-2016 IPR024671 Autophagy-related protein 22-like NIAKO_RS13975 4d5e17f766453784915bf5d84f1684ec 431 PANTHER PTHR23519 12 430 1.0E-56 T 23-04-2016 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 SMART SM00322 210 277 3.3E-4 T 23-04-2016 IPR004087 K Homology domain GO:0003676 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 SUPERFAMILY SSF54791 208 299 2.28E-13 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Pfam PF12072 Domain of unknown function (DUF3552) 8 207 6.6E-39 T 23-04-2016 IPR022711 Ribonuclease Y, N-terminal NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 SMART SM00471 334 440 6.3E-8 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 SUPERFAMILY SSF109604 310 472 2.34E-27 T 23-04-2016 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Gene3D G3DSA:1.10.3210.10 318 497 5.2E-40 T 23-04-2016 IPR006674 HD domain NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Pfam PF00013 KH domain 224 263 2.5E-4 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Gene3D G3DSA:3.30.1370.10 221 303 2.4E-6 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 11 522 8.8E-194 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Pfam PF01966 HD domain 340 480 1.2E-18 T 23-04-2016 IPR006674 HD domain NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 Hamap MF_00335 Ribonuclease Y [rny]. 7 522 23.223 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 TIGRFAM TIGR00277 HDIG: HDIG domain 334 410 2.0E-21 T 23-04-2016 IPR006675 HDIG domain NIAKO_RS27545 4e7660cb3e3ead20c708b91f86352162 522 PANTHER PTHR12826 192 521 8.9E-125 T 23-04-2016 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 PANTHER PTHR10286:SF0 1 157 5.3E-25 T 23-04-2016 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 Pfam PF00719 Inorganic pyrophosphatase 6 158 1.6E-32 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 53 59 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 SUPERFAMILY SSF50324 3 158 9.55E-39 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 PANTHER PTHR10286 1 157 5.3E-25 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS15365 9114e6a6a894ded0ccbc35fbca727b47 160 Gene3D G3DSA:3.90.80.10 2 157 5.5E-31 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NIAKO_RS26425 ef09ff9d9f6380c9c6a425304240cda3 484 SUPERFAMILY SSF48452 18 482 3.03E-80 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26425 ef09ff9d9f6380c9c6a425304240cda3 484 Pfam PF14322 Starch-binding associating with outer membrane 21 218 2.3E-15 T 23-04-2016 NIAKO_RS26425 ef09ff9d9f6380c9c6a425304240cda3 484 Pfam PF07980 SusD family 346 482 1.8E-20 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS26425 ef09ff9d9f6380c9c6a425304240cda3 484 Gene3D G3DSA:1.25.40.10 202 418 8.2E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10985 aa47ab069c3c58db7da2c38e650f6af0 301 PANTHER PTHR34847 1 226 3.4E-30 T 23-04-2016 NIAKO_RS10985 aa47ab069c3c58db7da2c38e650f6af0 301 Gene3D G3DSA:3.30.420.40 1 78 6.7E-4 T 23-04-2016 NIAKO_RS10985 aa47ab069c3c58db7da2c38e650f6af0 301 SUPERFAMILY SSF53067 1 87 2.98E-9 T 23-04-2016 NIAKO_RS10985 aa47ab069c3c58db7da2c38e650f6af0 301 SUPERFAMILY SSF53067 140 225 2.98E-9 T 23-04-2016 NIAKO_RS10985 aa47ab069c3c58db7da2c38e650f6af0 301 Pfam PF02543 Carbamoyltransferase N-terminus 4 234 1.0E-47 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 NIAKO_RS31025 92bfddce3772f2922dddeecb00f29399 138 SUPERFAMILY SSF46785 5 135 9.08E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS31025 92bfddce3772f2922dddeecb00f29399 138 Pfam PF01475 Ferric uptake regulator family 12 114 8.0E-14 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NIAKO_RS31025 92bfddce3772f2922dddeecb00f29399 138 PANTHER PTHR33202 1 138 1.0E-11 T 23-04-2016 NIAKO_RS31025 92bfddce3772f2922dddeecb00f29399 138 Gene3D G3DSA:1.10.10.10 4 80 1.8E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 SUPERFAMILY SSF51735 3 234 8.66E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 Gene3D G3DSA:3.40.50.720 3 231 1.2E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PANTHER PTHR24322 5 126 4.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PANTHER PTHR24322 142 176 4.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 9.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 9.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 9.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 9.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 9.4E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 Pfam PF00106 short chain dehydrogenase 3 184 8.2E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PANTHER PTHR24322:SF57 5 126 4.0E-24 T 23-04-2016 NIAKO_RS18355 9f2c6cf1bfa5cad58532538f6c2d7c0b 236 PANTHER PTHR24322:SF57 142 176 4.0E-24 T 23-04-2016 NIAKO_RS13045 4c84b5b3a63651ed73efefa93cca46b3 297 SMART SM01150 5 291 1.5E-107 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 NIAKO_RS13045 4c84b5b3a63651ed73efefa93cca46b3 297 PANTHER PTHR31136:SF2 1 297 7.3E-133 T 23-04-2016 NIAKO_RS13045 4c84b5b3a63651ed73efefa93cca46b3 297 Pfam PF07063 Domain of unknown function (DUF1338) 5 291 2.7E-84 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 NIAKO_RS13045 4c84b5b3a63651ed73efefa93cca46b3 297 PANTHER PTHR31136 1 297 7.3E-133 T 23-04-2016 NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 PANTHER PTHR10996 1 305 2.5E-82 T 23-04-2016 NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 305 6.9E-24 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 Gene3D G3DSA:3.40.50.720 108 290 2.1E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 Gene3D G3DSA:3.40.50.720 2 107 2.2E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 287 1.9E-48 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 SUPERFAMILY SSF51735 98 289 2.57E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34110 ce23274bd4fb0126634074a52d546f1b 307 SUPERFAMILY SSF52283 1 132 5.86E-27 T 23-04-2016 NIAKO_RS03250 b7a814cc08e6b58ec1133ceedf58f4fc 280 SUPERFAMILY SSF56935 9 276 7.14E-6 T 23-04-2016 NIAKO_RS03250 b7a814cc08e6b58ec1133ceedf58f4fc 280 Gene3D G3DSA:2.40.128.90 34 252 2.0E-5 T 23-04-2016 IPR023619 Peptidase A26 GO:0004190 NIAKO_RS19540 974b4479b81cee60612243758376cac0 399 SUPERFAMILY SSF81593 256 375 4.32E-13 T 23-04-2016 NIAKO_RS19540 974b4479b81cee60612243758376cac0 399 SMART SM00748 256 369 4.7E-11 T 23-04-2016 IPR007842 HEPN domain NIAKO_RS19540 974b4479b81cee60612243758376cac0 399 Gene3D G3DSA:1.20.120.330 255 375 5.4E-14 T 23-04-2016 NIAKO_RS19540 974b4479b81cee60612243758376cac0 399 Pfam PF05168 HEPN domain 255 373 5.1E-15 T 23-04-2016 IPR007842 HEPN domain NIAKO_RS14980 db395199cd7622d37509d9d1f89744ae 97 Pfam PF15631 NTF2 fold immunity protein 32 97 2.0E-22 T 23-04-2016 IPR028921 NTF2 fold domain NIAKO_RS03180 4dd56b16b60ab729f2738d0ee9612708 538 Gene3D G3DSA:1.25.10.10 339 518 1.5E-5 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03180 4dd56b16b60ab729f2738d0ee9612708 538 Gene3D G3DSA:1.25.10.10 12 204 1.2E-4 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03180 4dd56b16b60ab729f2738d0ee9612708 538 Gene3D G3DSA:1.25.10.10 216 306 4.1E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03180 4dd56b16b60ab729f2738d0ee9612708 538 SUPERFAMILY SSF48371 17 513 3.54E-15 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 3 197 4.1E-34 T 23-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 PIRSF PIRSF039123 1 226 1.2E-65 T 23-04-2016 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 Gene3D G3DSA:3.40.50.620 2 139 2.9E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 Gene3D G3DSA:3.90.1490.10 140 207 8.3E-20 T 23-04-2016 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 SUPERFAMILY SSF52402 2 208 2.62E-65 T 23-04-2016 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 PANTHER PTHR12196 115 203 1.8E-15 T 23-04-2016 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NIAKO_RS33665 f1aca97600bd97d16df1c5fef7016ba7 235 Pfam PF01902 Diphthamide synthase 3 197 2.5E-35 T 23-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NIAKO_RS18745 797f3ed8c092c8533dd61baa3de8370d 536 Pfam PF14322 Starch-binding associating with outer membrane 121 246 5.3E-9 T 23-04-2016 NIAKO_RS18745 797f3ed8c092c8533dd61baa3de8370d 536 SUPERFAMILY SSF48452 21 536 7.33E-107 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18745 797f3ed8c092c8533dd61baa3de8370d 536 Pfam PF07980 SusD family 365 536 1.2E-32 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS18745 797f3ed8c092c8533dd61baa3de8370d 536 Gene3D G3DSA:1.25.40.10 381 476 4.2E-51 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18745 797f3ed8c092c8533dd61baa3de8370d 536 Gene3D G3DSA:1.25.40.10 226 344 4.2E-51 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09455 893aac88009d96801f07c8eb12930128 561 SUPERFAMILY SSF48452 20 561 3.54E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09455 893aac88009d96801f07c8eb12930128 561 Gene3D G3DSA:1.25.40.10 225 332 1.6E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09455 893aac88009d96801f07c8eb12930128 561 Gene3D G3DSA:1.25.40.10 397 488 1.6E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09455 893aac88009d96801f07c8eb12930128 561 Pfam PF14322 Starch-binding associating with outer membrane 24 243 2.3E-17 T 23-04-2016 NIAKO_RS09455 893aac88009d96801f07c8eb12930128 561 Pfam PF07980 SusD family 294 561 3.4E-46 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS02215 686d57e18351cafdd8e72c9abf42caa5 321 Pfam PF13478 XdhC Rossmann domain 172 315 5.4E-35 T 23-04-2016 IPR027051 XdhC Rossmann domain NIAKO_RS02215 686d57e18351cafdd8e72c9abf42caa5 321 Pfam PF02625 XdhC and CoxI family 15 73 2.9E-11 T 23-04-2016 IPR003777 XdhC- CoxI NIAKO_RS02215 686d57e18351cafdd8e72c9abf42caa5 321 PANTHER PTHR30388 4 321 1.7E-48 T 23-04-2016 NIAKO_RS02215 686d57e18351cafdd8e72c9abf42caa5 321 PANTHER PTHR30388:SF4 4 321 1.7E-48 T 23-04-2016 NIAKO_RS02085 fe6817ff2fa4a6784cd8cf0fb5a7a018 221 SUPERFAMILY SSF53335 7 206 5.58E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS02085 fe6817ff2fa4a6784cd8cf0fb5a7a018 221 PANTHER PTHR10509 32 206 3.2E-66 T 23-04-2016 NIAKO_RS02085 fe6817ff2fa4a6784cd8cf0fb5a7a018 221 Gene3D G3DSA:3.40.50.150 6 221 1.9E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS02085 fe6817ff2fa4a6784cd8cf0fb5a7a018 221 Pfam PF01596 O-methyltransferase 33 206 7.2E-44 T 23-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 NIAKO_RS32825 4098ad031f68a6b8be210b1eb75e18cd 126 PANTHER PTHR11803 1 125 3.9E-52 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS32825 4098ad031f68a6b8be210b1eb75e18cd 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 125 3.4E-52 T 23-04-2016 IPR006056 RidA family NIAKO_RS32825 4098ad031f68a6b8be210b1eb75e18cd 126 SUPERFAMILY SSF55298 1 126 4.87E-46 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS32825 4098ad031f68a6b8be210b1eb75e18cd 126 Gene3D G3DSA:3.30.1330.40 3 125 4.1E-49 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NIAKO_RS32825 4098ad031f68a6b8be210b1eb75e18cd 126 Pfam PF01042 Endoribonuclease L-PSP 9 125 1.6E-42 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family NIAKO_RS18990 e5004528576af73a22e31f179dcb81eb 400 Pfam PF00144 Beta-lactamase 2 293 1.8E-44 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS18990 e5004528576af73a22e31f179dcb81eb 400 PANTHER PTHR22935:SF1 3 289 4.2E-58 T 23-04-2016 NIAKO_RS18990 e5004528576af73a22e31f179dcb81eb 400 PANTHER PTHR22935 3 289 4.2E-58 T 23-04-2016 NIAKO_RS18990 e5004528576af73a22e31f179dcb81eb 400 SUPERFAMILY SSF56601 2 309 4.23E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS18990 e5004528576af73a22e31f179dcb81eb 400 Gene3D G3DSA:3.40.710.10 2 302 2.4E-72 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 PANTHER PTHR17630:SF49 19 343 1.9E-90 T 23-04-2016 NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 49 213 1.4E-6 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 Gene3D G3DSA:3.40.50.1820 40 341 7.3E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 SUPERFAMILY SSF53474 269 341 2.64E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 SUPERFAMILY SSF53474 19 176 2.64E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 SUPERFAMILY SSF53474 212 239 2.64E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23890 4590b57229c50ffac3a1eac960c26714 343 PANTHER PTHR17630 19 343 1.9E-90 T 23-04-2016 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 Gene3D G3DSA:1.10.10.10 25 69 3.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 PANTHER PTHR30363 14 260 6.8E-43 T 23-04-2016 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 Pfam PF00455 DeoR C terminal sensor domain 85 241 1.9E-34 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 51 3.1E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 51 69 3.1E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 PANTHER PTHR30363:SF4 14 260 6.8E-43 T 23-04-2016 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 Pfam PF08220 DeoR-like helix-turn-helix domain 19 71 1.9E-12 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 SMART SM01134 82 243 2.5E-40 T 23-04-2016 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 SMART SM00420 19 71 1.3E-10 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 19 53 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 SUPERFAMILY SSF100950 86 243 9.63E-25 T 23-04-2016 NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 SUPERFAMILY SSF46785 17 80 7.87E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35710 a2dc1e87774f1e2e66ab3c8a563c4cb4 260 Gene3D G3DSA:3.40.50.1360 85 225 6.6E-12 T 23-04-2016 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 PANTHER PTHR11647:SF1 1 454 2.7E-195 T 23-04-2016 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 Gene3D G3DSA:2.30.40.10 3 67 1.1E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 3.1E-175 T 23-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 Gene3D G3DSA:3.20.20.140 68 374 1.7E-116 T 23-04-2016 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 SUPERFAMILY SSF51338 344 456 2.07E-36 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 SUPERFAMILY SSF51556 53 381 1.95E-106 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 Pfam PF01979 Amidohydrolase family 49 434 5.9E-33 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 Gene3D G3DSA:2.30.40.10 375 455 9.6E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 PANTHER PTHR11647 1 454 2.7E-195 T 23-04-2016 NIAKO_RS02250 4cbc84180e625e2c625c0ca767fba89b 460 SUPERFAMILY SSF51338 1 75 8.64E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NIAKO_RS11065 81af1459c5365160572a494b484add1f 337 PANTHER PTHR30273 41 335 1.4E-45 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11065 81af1459c5365160572a494b484add1f 337 Pfam PF04773 FecR protein 121 223 6.2E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS11065 81af1459c5365160572a494b484add1f 337 PIRSF PIRSF018266 5 337 3.8E-49 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11065 81af1459c5365160572a494b484add1f 337 PANTHER PTHR30273:SF2 41 335 1.4E-45 T 23-04-2016 NIAKO_RS11065 81af1459c5365160572a494b484add1f 337 Pfam PF16344 Domain of unknown function (DUF4974) 235 334 1.1E-14 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 963 969 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PANTHER PTHR33841:SF2 540 658 6.7E-27 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PANTHER PTHR33841:SF2 215 474 6.7E-27 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 SUPERFAMILY SSF53335 1033 1106 2.87E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 SUPERFAMILY SSF53335 536 687 2.87E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 SUPERFAMILY SSF53335 314 465 2.87E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 SUPERFAMILY SSF53335 952 978 2.87E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PANTHER PTHR33841 540 658 6.7E-27 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PANTHER PTHR33841 215 474 6.7E-27 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 Gene3D G3DSA:3.40.50.150 636 666 8.3E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 Gene3D G3DSA:3.40.50.150 952 976 8.3E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 Gene3D G3DSA:3.40.50.150 547 604 8.3E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 Gene3D G3DSA:3.40.50.150 1025 1110 8.3E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 545 561 3.6E-5 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1044 1068 3.6E-5 T 23-04-2016 NIAKO_RS23650 f1c3220ba3ba0e76dce5b0b1622295ee 1584 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 960 972 3.6E-5 T 23-04-2016 NIAKO_RS35700 f7ab7d78c3062e20e3c28e4388024dc1 541 PANTHER PTHR35148 1 541 4.9E-39 T 23-04-2016 NIAKO_RS35700 f7ab7d78c3062e20e3c28e4388024dc1 541 Pfam PF12771 Starch-binding associating with outer membrane 112 528 8.8E-29 T 23-04-2016 NIAKO_RS35700 f7ab7d78c3062e20e3c28e4388024dc1 541 SUPERFAMILY SSF48452 19 541 1.79E-86 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 214 38.505 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 PANTHER PTHR10851:SF0 1 214 4.7E-104 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 36 118 3.6E-25 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 173 214 1.3E-21 T 23-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 Gene3D G3DSA:2.30.110.10 18 214 5.3E-83 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 PIRSF PIRSF000190 1 214 2.1E-80 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 SUPERFAMILY SSF50475 8 214 2.62E-66 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 183 196 - T 23-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 PANTHER PTHR10851 1 214 4.7E-104 T 23-04-2016 NIAKO_RS29670 ac89c8ee25bf262e5c0fa7223c6a6c90 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 214 7.8E-85 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 Gene3D G3DSA:2.60.40.10 26 144 2.2E-15 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 PANTHER PTHR10357:SF99 403 615 1.6E-176 T 23-04-2016 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 PANTHER PTHR10357:SF99 23 385 1.6E-176 T 23-04-2016 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 SUPERFAMILY SSF81296 24 148 6.16E-19 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 SUPERFAMILY SSF51445 127 561 1.33E-120 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 SMART SM00642 174 553 6.3E-7 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 PANTHER PTHR10357 403 615 1.6E-176 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 PANTHER PTHR10357 23 385 1.6E-176 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 Pfam PF00128 Alpha amylase, catalytic domain 182 283 7.5E-11 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 22 626 4.6E-231 T 23-04-2016 IPR011840 Pullulanase, type I NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 28 98 5.9E-9 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS18755 eaff1587ee01f6a33574cbbeffd743a5 654 Gene3D G3DSA:3.20.20.80 145 561 6.0E-97 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 Gene3D G3DSA:3.40.50.2300 59 176 4.9E-41 T 23-04-2016 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 Gene3D G3DSA:3.40.50.2300 177 314 3.4E-34 T 23-04-2016 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 Pfam PF13377 Periplasmic binding protein-like domain 174 337 6.1E-29 T 23-04-2016 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 SUPERFAMILY SSF47413 4 61 2.33E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 PANTHER PTHR30146 3 339 1.5E-90 T 23-04-2016 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 Gene3D G3DSA:1.10.260.40 4 58 8.3E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 53 9.3E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 SUPERFAMILY SSF53822 66 338 6.28E-54 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS24180 1fe861603c11f92090d9c363ab1afacc 344 SMART SM00354 3 76 3.3E-24 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 SUPERFAMILY SSF51735 2 184 1.05E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 182 3.6E-65 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 SUPERFAMILY SSF48179 184 287 3.4E-34 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 PIRSF PIRSF000105 1 294 2.9E-94 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 281 6.2E-34 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 Gene3D G3DSA:3.40.50.720 2 186 5.3E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 PANTHER PTHR23309 2 290 3.7E-144 T 23-04-2016 NIAKO_RS22385 08d5834f4cd6c55cbbeb62b466373a25 296 Gene3D G3DSA:1.10.1040.10 187 282 3.9E-35 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 14 159 3.6E-56 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 14 160 8.5E-60 T 23-04-2016 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 PANTHER PTHR10371 6 164 2.4E-83 T 23-04-2016 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 118 136 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 SUPERFAMILY SSF52833 6 163 2.35E-56 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 PIRSF PIRSF000216 1 168 1.2E-67 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NIAKO_RS34780 563e02d5a3608fd05e46f042d3313b40 168 Gene3D G3DSA:3.40.30.10 85 159 6.9E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS09630 2d86b2aab276f075803b9423f988b7a5 442 SUPERFAMILY SSF52266 71 387 7.05E-64 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS09630 2d86b2aab276f075803b9423f988b7a5 442 PANTHER PTHR22901 1 435 1.7E-89 T 23-04-2016 NIAKO_RS09630 2d86b2aab276f075803b9423f988b7a5 442 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 72 190 1.3E-29 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS09630 2d86b2aab276f075803b9423f988b7a5 442 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 193 327 1.4E-37 T 23-04-2016 IPR005181 Sialate O-acetylesterase domain NIAKO_RS09630 2d86b2aab276f075803b9423f988b7a5 442 PANTHER PTHR22901:SF0 1 435 1.7E-89 T 23-04-2016 NIAKO_RS33055 c1cb489d60d5860648bd6a3e92c6cec2 70 Gene3D G3DSA:3.30.70.100 17 67 1.4E-4 T 23-04-2016 NIAKO_RS08245 094844d93e7d41d1d6a0a624ddc1c78b 846 Gene3D G3DSA:2.60.40.1120 40 124 2.2E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08245 094844d93e7d41d1d6a0a624ddc1c78b 846 SUPERFAMILY SSF49464 40 116 4.71E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS08245 094844d93e7d41d1d6a0a624ddc1c78b 846 Pfam PF13715 CarboxypepD_reg-like domain 41 117 5.5E-14 T 23-04-2016 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 SUPERFAMILY SSF82866 587 782 2.88E-30 T 23-04-2016 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 Pfam PF03176 MMPL family 442 779 2.3E-15 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 Pfam PF03176 MMPL family 158 384 3.3E-11 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 Gene3D G3DSA:1.20.1640.10 585 782 2.5E-29 T 23-04-2016 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 Gene3D G3DSA:1.20.1640.10 178 387 1.3E-26 T 23-04-2016 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 SUPERFAMILY SSF82866 196 384 1.31E-20 T 23-04-2016 NIAKO_RS28270 4ae1fa581a8110813744bcffed6c969d 783 PANTHER PTHR33406 1 780 2.4E-37 T 23-04-2016 NIAKO_RS18460 8a068790b0ba3ff64f817a1d27b94eec 194 PANTHER PTHR24567 12 181 1.3E-13 T 23-04-2016 NIAKO_RS18460 8a068790b0ba3ff64f817a1d27b94eec 194 Gene3D G3DSA:2.60.120.10 3 156 4.0E-35 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS18460 8a068790b0ba3ff64f817a1d27b94eec 194 PANTHER PTHR24567:SF33 12 181 1.3E-13 T 23-04-2016 NIAKO_RS18460 8a068790b0ba3ff64f817a1d27b94eec 194 Pfam PF00027 Cyclic nucleotide-binding domain 31 116 1.7E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS18460 8a068790b0ba3ff64f817a1d27b94eec 194 SUPERFAMILY SSF51206 5 138 9.95E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 ProSitePatterns PS00640 Eukaryotic thiol (cysteine) proteases asparagine active site. 260 279 - T 23-04-2016 IPR025661 Cysteine peptidase, asparagine active site NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 SUPERFAMILY SSF54001 63 292 2.14E-63 T 23-04-2016 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 Pfam PF00112 Papain family cysteine protease 79 290 5.6E-49 T 23-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 PANTHER PTHR12411 18 297 1.3E-53 T 23-04-2016 IPR013128 Peptidase C1A GO:0008234 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 SMART SM00645 78 294 3.7E-50 T 23-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 Gene3D G3DSA:3.90.70.10 3 292 3.2E-67 T 23-04-2016 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 PRINTS PR00705 Papain cysteine protease (C1) family signature 99 114 9.7E-5 T 23-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 PRINTS PR00705 Papain cysteine protease (C1) family signature 247 257 9.7E-5 T 23-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 NIAKO_RS01105 2b64af8861ea58e351a698ed0d8cc6c7 370 PRINTS PR00705 Papain cysteine protease (C1) family signature 260 266 9.7E-5 T 23-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 PANTHER PTHR11994 7 184 1.3E-77 T 23-04-2016 NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 SUPERFAMILY SSF55282 9 184 6.12E-71 T 23-04-2016 IPR022803 Ribosomal protein L5 domain NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 PANTHER PTHR11994:SF4 7 184 1.3E-77 T 23-04-2016 NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 Gene3D G3DSA:3.30.1440.10 8 184 1.4E-71 T 23-04-2016 IPR022803 Ribosomal protein L5 domain NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 PIRSF PIRSF002161 3 189 7.9E-64 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 Pfam PF00281 Ribosomal protein L5 31 86 1.5E-21 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 7 185 40.749 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS22940 10b6e1c7e78c6443ebd21b25499a2ad7 189 Pfam PF00673 ribosomal L5P family C-terminus 90 183 5.5E-40 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal NIAKO_RS15550 6cc7d205076d79161b2372ac04ebedbd 308 PANTHER PTHR11935:SF95 47 242 1.3E-16 T 23-04-2016 NIAKO_RS15550 6cc7d205076d79161b2372ac04ebedbd 308 PANTHER PTHR11935 47 242 1.3E-16 T 23-04-2016 NIAKO_RS15550 6cc7d205076d79161b2372ac04ebedbd 308 SUPERFAMILY SSF56281 12 284 6.0E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS15550 6cc7d205076d79161b2372ac04ebedbd 308 SMART SM00849 43 235 0.0044 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS15550 6cc7d205076d79161b2372ac04ebedbd 308 Gene3D G3DSA:3.60.15.10 13 260 3.1E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS23960 f9e675ca7cf32a171fa2884089763c57 499 SUPERFAMILY SSF53335 55 203 2.6E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS23960 f9e675ca7cf32a171fa2884089763c57 499 Gene3D G3DSA:3.40.50.150 56 201 6.5E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 PANTHER PTHR23518 1 391 7.1E-26 T 23-04-2016 NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 Gene3D G3DSA:1.20.1250.20 225 391 1.0E-18 T 23-04-2016 NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 Gene3D G3DSA:1.20.1250.20 17 197 1.1E-26 T 23-04-2016 NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 Pfam PF07690 Major Facilitator Superfamily 236 390 4.6E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 Pfam PF07690 Major Facilitator Superfamily 24 192 3.2E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS34390 e6fdeaac55c5061e04ad8dd43080353c 399 SUPERFAMILY SSF103473 17 394 1.44E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS23450 95a7ea6a83f9b0b3b8413cff9277678e 256 Gene3D G3DSA:3.40.30.10 119 254 3.3E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS23450 95a7ea6a83f9b0b3b8413cff9277678e 256 SUPERFAMILY SSF52833 122 243 3.32E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS23450 95a7ea6a83f9b0b3b8413cff9277678e 256 Pfam PF13905 Thioredoxin-like 149 240 9.9E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS23450 95a7ea6a83f9b0b3b8413cff9277678e 256 Pfam PF17127 Domain of unknown function (DUF5106) 28 120 2.6E-7 T 23-04-2016 IPR033395 Domain of unknown function DUF5106 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 Gene3D G3DSA:1.20.58.410 3 91 1.2E-16 T 23-04-2016 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 PANTHER PTHR11075:SF9 1 353 1.5E-165 T 23-04-2016 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 SMART SM00937 63 176 1.2E-61 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 Pfam PF00472 RF-1 domain 209 318 8.6E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 PANTHER PTHR11075 1 353 1.5E-165 T 23-04-2016 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 Gene3D G3DSA:3.30.160.20 208 286 1.0E-30 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 SUPERFAMILY SSF75620 8 350 4.84E-128 T 23-04-2016 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 225 241 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 Pfam PF03462 PCRF domain 9 201 4.6E-72 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 352 3.8E-149 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NIAKO_RS28290 70e3367d16e5f68ad5cf781c28665d5a 354 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 37.773 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NIAKO_RS33460 235ea1f2517d230c7268de6627c178c1 210 PANTHER PTHR23028:SF53 3 201 8.9E-32 T 23-04-2016 NIAKO_RS33460 235ea1f2517d230c7268de6627c178c1 210 Pfam PF01757 Acyltransferase family 11 195 8.4E-14 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS33460 235ea1f2517d230c7268de6627c178c1 210 PANTHER PTHR23028 3 201 8.9E-32 T 23-04-2016 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 SMART SM01321 8 121 3.8E-12 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 Pfam PF01797 Transposase IS200 like 10 121 1.9E-23 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 Gene3D G3DSA:3.30.70.1290 4 125 1.0E-19 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 SUPERFAMILY SSF143422 6 122 3.53E-23 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 PANTHER PTHR33360:SF4 10 137 1.4E-13 T 23-04-2016 NIAKO_RS22105 44f0e33723582159b2102b7cf573eb3e 142 PANTHER PTHR33360 10 137 1.4E-13 T 23-04-2016 NIAKO_RS18220 ed86fca27f938b83a9b87b5f1b434dc8 451 SUPERFAMILY SSF103473 12 398 1.24E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS18220 ed86fca27f938b83a9b87b5f1b434dc8 451 PANTHER PTHR23513 1 391 2.1E-78 T 23-04-2016 NIAKO_RS18220 ed86fca27f938b83a9b87b5f1b434dc8 451 Pfam PF05977 Transmembrane secretion effector 6 398 6.6E-60 T 23-04-2016 IPR010290 Transmembrane secretion effector NIAKO_RS18220 ed86fca27f938b83a9b87b5f1b434dc8 451 Gene3D G3DSA:1.20.1250.20 213 395 2.7E-17 T 23-04-2016 NIAKO_RS18220 ed86fca27f938b83a9b87b5f1b434dc8 451 Gene3D G3DSA:1.20.1250.20 13 196 5.4E-17 T 23-04-2016 NIAKO_RS01495 aa795795f680a1100812797225b62608 121 Pfam PF03795 YCII-related domain 17 112 2.2E-17 T 23-04-2016 IPR005545 YCII-related NIAKO_RS01495 aa795795f680a1100812797225b62608 121 SUPERFAMILY SSF54909 11 114 3.22E-24 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS01495 aa795795f680a1100812797225b62608 121 Gene3D G3DSA:3.30.70.1060 1 115 1.6E-30 T 23-04-2016 NIAKO_RS01495 aa795795f680a1100812797225b62608 121 PANTHER PTHR35174 3 117 3.2E-25 T 23-04-2016 NIAKO_RS29230 257a023382eb1e214e6dcfb36e345681 225 Pfam PF09601 Protein of unknown function (DUF2459) 46 215 1.1E-65 T 23-04-2016 IPR011727 Conserved hypothetical protein CHP02117 NIAKO_RS29230 257a023382eb1e214e6dcfb36e345681 225 TIGRFAM TIGR02117 chp_urease_rgn: conserved hypothetical protein 16 220 2.0E-53 T 23-04-2016 IPR011727 Conserved hypothetical protein CHP02117 NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 88 2.4E-15 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 Gene3D G3DSA:1.20.1290.10 6 110 5.2E-29 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 PANTHER PTHR33930:SF2 24 107 6.1E-20 T 23-04-2016 NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 PANTHER PTHR33930 24 107 6.1E-20 T 23-04-2016 NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 104 2.5E-17 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS12170 ab6f16cb433fbc11495e4a561820c247 113 SUPERFAMILY SSF69118 17 111 5.76E-24 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS15660 45c5f59c8816c0b30bafba5a01e308f9 345 Pfam PF11751 Protein of unknown function (DUF3308) 18 330 9.8E-68 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS15660 45c5f59c8816c0b30bafba5a01e308f9 345 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 330 5.8E-74 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS30195 9bcd034de3720022cf41c5069b000ade 123 Gene3D G3DSA:1.10.260.40 4 76 3.4E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30195 9bcd034de3720022cf41c5069b000ade 123 SUPERFAMILY SSF47413 7 75 1.47E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30195 9bcd034de3720022cf41c5069b000ade 123 SMART SM00530 5 60 0.0068 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS04700 a2868c3aaf1560b03def97e0dc099f4c 420 SUPERFAMILY SSF63825 210 411 7.59E-8 T 23-04-2016 NIAKO_RS04700 a2868c3aaf1560b03def97e0dc099f4c 420 Pfam PF08309 LVIVD repeat 317 337 2.2 T 23-04-2016 IPR013211 LVIVD NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 355 385 2.5E-16 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 153 1169 2.4E-175 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 1010 1054 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 463 550 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 231 301 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 331 403 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 1091 1118 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF56935 591 941 3.66E-65 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.40.170.20 1019 1044 2.7E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.40.170.20 381 403 2.7E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.40.170.20 1079 1121 2.7E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.40.170.20 575 950 2.7E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.40.170.20 472 535 2.7E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 SUPERFAMILY SSF49464 152 232 1.83E-12 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Pfam PF07715 TonB-dependent Receptor Plug Domain 243 379 3.0E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532 727 951 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532 118 305 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532 967 1167 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532 669 696 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532 331 551 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Pfam PF13715 CarboxypepD_reg-like domain 154 234 1.4E-12 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.60.40.1120 154 236 1.1E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 Gene3D G3DSA:2.170.130.10 237 380 2.7E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532:SF57 727 951 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532:SF57 118 305 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532:SF57 967 1167 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532:SF57 669 696 5.5E-139 T 23-04-2016 NIAKO_RS19965 5583e03f610c1f566a2e52c6349432f9 1169 PANTHER PTHR11532:SF57 331 551 5.5E-139 T 23-04-2016 NIAKO_RS21040 c7330f261df31141c30e828cec393800 197 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 126 197 1.2E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25745 499212612985e532d64f4e6af2a45355 564 SUPERFAMILY SSF50978 238 349 2.87E-5 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 NIAKO_RS25745 499212612985e532d64f4e6af2a45355 564 Pfam PF16410 Domain of unknown function (DUF5018) 18 362 5.3E-39 T 23-04-2016 IPR032186 Domain of unknown function DUF5018 NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 SUPERFAMILY SSF53822 121 338 2.47E-17 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 Gene3D G3DSA:3.40.50.2300 272 326 3.1E-6 T 23-04-2016 NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 PANTHER PTHR38445 6 295 3.6E-13 T 23-04-2016 NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 SUPERFAMILY SSF46785 12 87 2.61E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 SMART SM00345 24 83 9.5E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 2.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NIAKO_RS18010 d0a2817b0478863f710575d393bdf86e 343 Gene3D G3DSA:1.10.10.10 13 84 1.5E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS00750 803d262936b5d0a4e486ada480d85d51 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 79 3.6E-5 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NIAKO_RS23595 aee29642b3a7c352405bdcdc3c3f1338 118 PANTHER PTHR33993 1 116 4.5E-23 T 23-04-2016 NIAKO_RS23595 aee29642b3a7c352405bdcdc3c3f1338 118 PANTHER PTHR33993:SF2 1 116 4.5E-23 T 23-04-2016 NIAKO_RS23595 aee29642b3a7c352405bdcdc3c3f1338 118 Gene3D G3DSA:3.10.180.10 9 116 6.8E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS23595 aee29642b3a7c352405bdcdc3c3f1338 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 113 1.0E-4 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS23595 aee29642b3a7c352405bdcdc3c3f1338 118 SUPERFAMILY SSF54593 11 118 6.31E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 2.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 159 1.1E-11 T 23-04-2016 NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 Gene3D G3DSA:3.40.50.720 1 197 4.3E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17105 fb80137ebcfa8feeea820ee2b4542964 199 SUPERFAMILY SSF51735 2 197 2.56E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Pfam PF03193 Protein of unknown function, DUF258 65 244 1.1E-50 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 PANTHER PTHR32120 1 307 2.5E-108 T 23-04-2016 NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Gene3D G3DSA:3.40.50.300 81 244 1.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 SUPERFAMILY SSF50249 1 69 1.14E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 SUPERFAMILY SSF52540 81 307 1.58E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Gene3D G3DSA:2.40.50.140 1 67 3.4E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 309 34.45 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 302 1.7E-69 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 PANTHER PTHR32120:SF2 1 307 2.5E-108 T 23-04-2016 NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Pfam PF16745 RsgA N-terminal domain 4 56 3.2E-11 T 23-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal NIAKO_RS27935 86687cca45e7add0106bb2c3ecf96623 310 Gene3D G3DSA:1.10.40.50 246 308 4.7E-22 T 23-04-2016 NIAKO_RS19270 f11419589863b8aa32e81028c87a06a8 332 Pfam PF11751 Protein of unknown function (DUF3308) 19 314 1.5E-49 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS19270 f11419589863b8aa32e81028c87a06a8 332 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 314 2.1E-59 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS36140 5c1efa32e091b42dfc979aa158159627 661 PANTHER PTHR30540:SF7 16 451 8.3E-148 T 23-04-2016 NIAKO_RS36140 5c1efa32e091b42dfc979aa158159627 661 PANTHER PTHR30540 16 451 8.3E-148 T 23-04-2016 NIAKO_RS36140 5c1efa32e091b42dfc979aa158159627 661 Pfam PF02705 K+ potassium transporter 14 547 3.1E-172 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 NIAKO_RS36140 5c1efa32e091b42dfc979aa158159627 661 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 643 26.219 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 PANTHER PTHR10342:SF236 236 572 4.0E-55 T 23-04-2016 NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 PANTHER PTHR10342 236 572 4.0E-55 T 23-04-2016 NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 Pfam PF00884 Sulfatase 276 559 7.5E-36 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 SUPERFAMILY SSF53649 274 575 6.4E-57 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 PIRSF PIRSF005091 5 643 1.5E-73 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 NIAKO_RS03685 6a16acd5cca894bda5fd8c4362052536 648 Gene3D G3DSA:3.40.720.10 276 572 1.3E-40 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 SMART SM00155 290 317 39.0 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 SMART SM00155 113 140 2.0E-6 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 Gene3D G3DSA:3.30.870.10 207 347 2.9E-22 T 23-04-2016 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 Gene3D G3DSA:3.30.870.10 16 174 5.6E-37 T 23-04-2016 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 Pfam PF13091 PLD-like domain 32 146 8.6E-18 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS18035 984276344b581075f49759b84ffae481 391 Pfam PF13091 PLD-like domain 218 342 8.1E-19 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS18035 984276344b581075f49759b84ffae481 391 PANTHER PTHR21248 7 386 5.4E-68 T 23-04-2016 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 SUPERFAMILY SSF56024 193 360 3.36E-24 T 23-04-2016 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 SUPERFAMILY SSF56024 11 175 4.97E-41 T 23-04-2016 NIAKO_RS18035 984276344b581075f49759b84ffae481 391 PANTHER PTHR21248:SF5 7 386 5.4E-68 T 23-04-2016 NIAKO_RS11725 6632fd643366c3affbb285a09963b8f3 472 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 152 434 2.9E-49 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 NIAKO_RS11725 6632fd643366c3affbb285a09963b8f3 472 Gene3D G3DSA:3.20.20.80 121 470 4.0E-64 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11725 6632fd643366c3affbb285a09963b8f3 472 SUPERFAMILY SSF51445 129 452 1.03E-54 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS11725 6632fd643366c3affbb285a09963b8f3 472 PANTHER PTHR31297 158 346 1.2E-18 T 23-04-2016 NIAKO_RS34960 95d42ba058bd75b2ba56a4461e489c8c 389 SUPERFAMILY SSF53756 8 373 1.88E-55 T 23-04-2016 NIAKO_RS34960 95d42ba058bd75b2ba56a4461e489c8c 389 Pfam PF00534 Glycosyl transferases group 1 187 350 1.3E-21 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS34960 95d42ba058bd75b2ba56a4461e489c8c 389 Pfam PF13439 Glycosyltransferase Family 4 18 174 2.8E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIAKO_RS34960 95d42ba058bd75b2ba56a4461e489c8c 389 PANTHER PTHR12526 8 388 6.3E-46 T 23-04-2016 NIAKO_RS34960 95d42ba058bd75b2ba56a4461e489c8c 389 Gene3D G3DSA:3.40.50.2000 155 349 2.1E-13 T 23-04-2016 NIAKO_RS13375 20d915f569e6a201214b2e0cc3dc1a66 241 Pfam PF00756 Putative esterase 44 206 3.8E-12 T 23-04-2016 IPR000801 Putative esterase NIAKO_RS13375 20d915f569e6a201214b2e0cc3dc1a66 241 Gene3D G3DSA:3.40.50.1820 15 237 1.6E-23 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS13375 20d915f569e6a201214b2e0cc3dc1a66 241 SUPERFAMILY SSF53474 4 239 1.13E-23 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03170 e9954353b31d6cf636e21664fb63747e 926 SUPERFAMILY SSF48371 37 489 1.15E-14 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS03170 e9954353b31d6cf636e21664fb63747e 926 SUPERFAMILY SSF48371 801 922 1.15E-14 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS03170 e9954353b31d6cf636e21664fb63747e 926 Gene3D G3DSA:1.25.10.10 33 122 3.3E-9 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03170 e9954353b31d6cf636e21664fb63747e 926 Gene3D G3DSA:1.25.10.10 188 240 3.3E-9 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS03170 e9954353b31d6cf636e21664fb63747e 926 Gene3D G3DSA:1.25.10.10 301 362 3.3E-9 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 Gene3D G3DSA:1.10.1660.10 4 87 1.1E-12 T 23-04-2016 NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 SUPERFAMILY SSF52242 181 234 4.51E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 SUPERFAMILY SSF46955 4 71 2.84E-13 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 SMART SM00422 4 70 4.3E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 Pfam PF13411 MerR HTH family regulatory protein 4 58 4.8E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NIAKO_RS34550 7f60ed20a092d5e03a5c5a6cf8b70714 298 Gene3D G3DSA:3.40.50.280 181 233 1.7E-5 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NIAKO_RS11165 df5e02db5d15e74d89afd8a05a08f348 176 PANTHER PTHR13887 10 171 9.2E-39 T 23-04-2016 NIAKO_RS11165 df5e02db5d15e74d89afd8a05a08f348 176 Pfam PF13462 Thioredoxin 10 170 5.7E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11165 df5e02db5d15e74d89afd8a05a08f348 176 Gene3D G3DSA:3.40.30.10 8 171 4.1E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS11165 df5e02db5d15e74d89afd8a05a08f348 176 SUPERFAMILY SSF52833 9 170 3.71E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 Gene3D G3DSA:3.60.15.10 22 301 1.2E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PANTHER PTHR28283 19 316 6.2E-56 T 23-04-2016 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PANTHER PTHR28283:SF1 19 316 6.2E-56 T 23-04-2016 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 SUPERFAMILY SSF56281 27 304 3.8E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 246 259 2.1E-25 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 90 108 2.1E-25 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 117 138 2.1E-25 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 227 238 2.1E-25 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 271 282 2.1E-25 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 Pfam PF02112 cAMP phosphodiesterases class-II 30 285 4.5E-45 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 PIRSF PIRSF000962 6 316 3.3E-75 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 NIAKO_RS12345 928905b7e1e1fb54776678acada91275 316 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 94 108 - T 23-04-2016 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 SMART SM00850 138 231 8.7E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 SMART SM00448 3 111 4.6E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 Gene3D G3DSA:3.40.50.2300 2 125 8.5E-27 T 23-04-2016 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 Pfam PF00072 Response regulator receiver domain 7 111 2.1E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 Pfam PF04397 LytTr DNA-binding domain 139 229 2.5E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 Gene3D G3DSA:2.40.50.40 129 198 8.9E-20 T 23-04-2016 NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 SUPERFAMILY SSF52172 4 135 1.85E-27 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS30600 03f61c63ee371763417e8cbee0020374 232 PANTHER PTHR26402 3 122 1.0E-28 T 23-04-2016 NIAKO_RS23230 48fc172b83d79f23beed91ef88bb920e 310 Pfam PF13480 Acetyltransferase (GNAT) domain 143 271 1.8E-8 T 23-04-2016 NIAKO_RS23230 48fc172b83d79f23beed91ef88bb920e 310 Gene3D G3DSA:3.40.630.30 104 257 2.0E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS23230 48fc172b83d79f23beed91ef88bb920e 310 SUPERFAMILY SSF55729 136 292 1.5E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS24150 c16576eb427b748a41c6f487a60f2851 477 PANTHER PTHR11785 219 475 1.1E-100 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS24150 c16576eb427b748a41c6f487a60f2851 477 PANTHER PTHR11785 3 201 1.1E-100 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS24150 c16576eb427b748a41c6f487a60f2851 477 PIRSF PIRSF006060 2 476 1.2E-76 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS24150 c16576eb427b748a41c6f487a60f2851 477 Pfam PF13520 Amino acid permease 12 462 4.5E-55 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS06075 b9419dbf180e1a22c921f82c6617c692 141 Pfam PF01594 Domain of unknown function DUF20 2 124 1.7E-14 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS06075 b9419dbf180e1a22c921f82c6617c692 141 PANTHER PTHR21716:SF7 2 129 2.5E-14 T 23-04-2016 NIAKO_RS06075 b9419dbf180e1a22c921f82c6617c692 141 PANTHER PTHR21716 2 129 2.5E-14 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS07930 a7e96848ad079ec88a394b1b5a655f07 182 Pfam PF14317 YcxB-like protein 109 170 4.7E-11 T 23-04-2016 IPR025588 YcxB-like protein NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 41 168 7.3E-17 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 Gene3D G3DSA:3.30.360.10 182 209 3.2E-20 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 Gene3D G3DSA:3.30.360.10 242 436 3.2E-20 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 SUPERFAMILY SSF51735 31 201 3.76E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 Gene3D G3DSA:3.40.50.720 37 181 2.3E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 PANTHER PTHR22604:SF122 237 445 8.4E-65 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 PANTHER PTHR22604:SF122 1 203 8.4E-65 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 SUPERFAMILY SSF55347 235 336 3.6E-12 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 SUPERFAMILY SSF55347 178 203 3.6E-12 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 PANTHER PTHR22604 237 445 8.4E-65 T 23-04-2016 NIAKO_RS17355 f35fb8002d65fcb99dd520a63c613214 451 PANTHER PTHR22604 1 203 8.4E-65 T 23-04-2016 NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 SUPERFAMILY SSF54631 3 141 1.52E-33 T 23-04-2016 NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 Pfam PF00571 CBS domain 15 60 1.8E-8 T 23-04-2016 IPR000644 CBS domain NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 Pfam PF00571 CBS domain 73 126 6.4E-14 T 23-04-2016 IPR000644 CBS domain NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 Gene3D G3DSA:3.10.580.10 3 124 1.6E-34 T 23-04-2016 NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 SMART SM00116 80 127 4.0E-8 T 23-04-2016 IPR000644 CBS domain NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 SMART SM00116 14 62 0.033 T 23-04-2016 IPR000644 CBS domain NIAKO_RS14600 680e32b07ffd7c42b52cb0b15cb715de 143 PANTHER PTHR11911 15 142 1.9E-39 T 23-04-2016 NIAKO_RS16940 9b6937ce70573661376b99d4904096ce 360 Pfam PF15899 BNR-Asp box repeat 62 73 0.019 T 23-04-2016 IPR002860 BNR repeat NIAKO_RS16940 9b6937ce70573661376b99d4904096ce 360 SUPERFAMILY SSF110296 4 357 1.96E-54 T 23-04-2016 NIAKO_RS16940 9b6937ce70573661376b99d4904096ce 360 Gene3D G3DSA:2.130.10.10 3 357 2.2E-74 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS03210 03f7660873aafbe13c59a357e99f3387 270 SUPERFAMILY SSF53474 48 266 5.74E-25 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03210 03f7660873aafbe13c59a357e99f3387 270 PANTHER PTHR38050 31 173 2.6E-21 T 23-04-2016 NIAKO_RS03210 03f7660873aafbe13c59a357e99f3387 270 Gene3D G3DSA:3.40.50.1820 29 266 1.1E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26695 4bdef20076928ed2ea1d1ebf199f319a 1103 SUPERFAMILY SSF52540 228 383 3.38E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26695 4bdef20076928ed2ea1d1ebf199f319a 1103 Gene3D G3DSA:3.40.50.300 225 321 6.9E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26695 4bdef20076928ed2ea1d1ebf199f319a 1103 Pfam PF08378 Nuclease-related domain 16 111 1.7E-7 T 23-04-2016 IPR011528 Nuclease-related domain, NERD NIAKO_RS06995 beebd6b624b94c3c191063ba3725a78e 156 PIRSF PIRSF000239 1 156 6.2E-26 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NIAKO_RS06995 beebd6b624b94c3c191063ba3725a78e 156 Gene3D G3DSA:3.40.30.10 1 151 2.3E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06995 beebd6b624b94c3c191063ba3725a78e 156 SUPERFAMILY SSF52833 1 150 1.92E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06995 beebd6b624b94c3c191063ba3725a78e 156 PANTHER PTHR10681 1 148 4.6E-42 T 23-04-2016 NIAKO_RS06995 beebd6b624b94c3c191063ba3725a78e 156 Pfam PF00578 AhpC/TSA family 4 128 2.5E-36 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS10280 d24b315f6b673faa63602d14d1768dd4 254 PANTHER PTHR30269 1 252 2.5E-68 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS10280 d24b315f6b673faa63602d14d1768dd4 254 Pfam PF01925 Sulfite exporter TauE/SafE 9 246 5.9E-38 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS10280 d24b315f6b673faa63602d14d1768dd4 254 PANTHER PTHR30269:SF0 1 252 2.5E-68 T 23-04-2016 NIAKO_RS29085 09d20f6d06dc757f569c3462ad47aeec 168 Gene3D G3DSA:1.20.120.450 5 165 6.5E-22 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS29085 09d20f6d06dc757f569c3462ad47aeec 168 SUPERFAMILY SSF109854 3 163 6.26E-17 T 23-04-2016 NIAKO_RS29085 09d20f6d06dc757f569c3462ad47aeec 168 Pfam PF12867 DinB superfamily 11 158 8.4E-17 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS35750 b005dbc606ebc1b14a15f44d5bd2b99c 357 Gene3D G3DSA:3.20.20.140 1 356 6.4E-80 T 23-04-2016 NIAKO_RS35750 b005dbc606ebc1b14a15f44d5bd2b99c 357 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 352 1.6E-52 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 NIAKO_RS35750 b005dbc606ebc1b14a15f44d5bd2b99c 357 SUPERFAMILY SSF51556 1 355 1.21E-64 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS35750 b005dbc606ebc1b14a15f44d5bd2b99c 357 PANTHER PTHR10443 130 355 5.5E-35 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 NIAKO_RS05825 b6eed210992631079254dd4025a1b92f 162 Gene3D G3DSA:3.40.30.10 15 153 1.8E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05825 b6eed210992631079254dd4025a1b92f 162 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS05825 b6eed210992631079254dd4025a1b92f 162 SUPERFAMILY SSF52833 37 149 1.99E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05825 b6eed210992631079254dd4025a1b92f 162 Pfam PF00578 AhpC/TSA family 26 101 3.9E-10 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS23605 0d71d3a9a76fbc18f6c24effe6e9dec2 253 PANTHER PTHR21631 3 225 2.0E-53 T 23-04-2016 NIAKO_RS23605 0d71d3a9a76fbc18f6c24effe6e9dec2 253 PANTHER PTHR21631:SF18 3 225 2.0E-53 T 23-04-2016 NIAKO_RS23605 0d71d3a9a76fbc18f6c24effe6e9dec2 253 Pfam PF13714 Phosphoenolpyruvate phosphomutase 5 242 8.7E-64 T 23-04-2016 NIAKO_RS23605 0d71d3a9a76fbc18f6c24effe6e9dec2 253 Gene3D G3DSA:3.20.20.60 3 224 4.7E-51 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS23605 0d71d3a9a76fbc18f6c24effe6e9dec2 253 SUPERFAMILY SSF51621 3 246 7.85E-53 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS27870 44566cba4d7fd86cba25c8b06940a32a 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 118 1.5E-31 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 NIAKO_RS27870 44566cba4d7fd86cba25c8b06940a32a 123 PANTHER PTHR34299:SF1 1 123 9.6E-32 T 23-04-2016 NIAKO_RS27870 44566cba4d7fd86cba25c8b06940a32a 123 Gene3D G3DSA:1.10.3830.10 9 123 9.9E-36 T 23-04-2016 NIAKO_RS27870 44566cba4d7fd86cba25c8b06940a32a 123 PANTHER PTHR34299 1 123 9.6E-32 T 23-04-2016 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 Pfam PF07690 Major Facilitator Superfamily 33 405 8.7E-52 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 SUPERFAMILY SSF103473 20 440 2.49E-78 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 Gene3D G3DSA:1.20.1250.20 25 223 2.2E-48 T 23-04-2016 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 PIRSF PIRSF002808 4 447 2.6E-36 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 Gene3D G3DSA:1.20.1250.20 237 441 7.1E-24 T 23-04-2016 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 PANTHER PTHR11662:SF277 26 448 8.4E-106 T 23-04-2016 NIAKO_RS25660 2d6f0eec7a5976be46f69212801c3aac 448 PANTHER PTHR11662 26 448 8.4E-106 T 23-04-2016 NIAKO_RS29185 e75f9b1312721c69103ecbf06b5864b3 99 Gene3D G3DSA:3.30.70.900 1 70 3.7E-7 T 23-04-2016 NIAKO_RS29185 e75f9b1312721c69103ecbf06b5864b3 99 SUPERFAMILY SSF54909 3 65 4.9E-5 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS36470 16ef84158a721be0eb3ef817ceaf74bc 862 SUPERFAMILY SSF52540 332 471 1.35E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 PANTHER PTHR10357 144 624 2.4E-45 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 PANTHER PTHR10357 44 126 2.4E-45 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Gene3D G3DSA:3.20.20.80 162 548 8.4E-59 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Pfam PF00128 Alpha amylase, catalytic domain 196 265 5.0E-11 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Pfam PF00128 Alpha amylase, catalytic domain 305 502 7.2E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 SMART SM00642 181 541 7.6E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Gene3D G3DSA:2.60.40.10 51 120 6.4E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 SUPERFAMILY SSF51445 158 548 4.35E-72 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Gene3D G3DSA:2.60.40.1180 571 625 2.6E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 45 118 5.0E-5 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NIAKO_RS18735 a6694ff90c2f3f74ddb00c4159c3e048 631 SUPERFAMILY SSF81296 55 127 2.27E-12 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS14595 d1035d1348b5afa5e1497f7baa25bf19 140 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 8 125 17.364 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 NIAKO_RS14595 d1035d1348b5afa5e1497f7baa25bf19 140 PANTHER PTHR11058:SF5 1 123 3.3E-38 T 23-04-2016 NIAKO_RS14595 d1035d1348b5afa5e1497f7baa25bf19 140 PANTHER PTHR11058 1 123 3.3E-38 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS14595 d1035d1348b5afa5e1497f7baa25bf19 140 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.4E-29 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS03320 af932fd53be136795c10e6e98792b504 458 Gene3D G3DSA:2.160.20.10 30 452 1.2E-80 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS03320 af932fd53be136795c10e6e98792b504 458 Pfam PF14592 Chondroitinase B 31 332 3.5E-45 T 23-04-2016 NIAKO_RS03320 af932fd53be136795c10e6e98792b504 458 SUPERFAMILY SSF51126 30 420 2.06E-64 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 Gene3D G3DSA:1.20.58.340 134 246 4.0E-43 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 Gene3D G3DSA:3.30.460.20 4 133 2.6E-36 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 SUPERFAMILY SSF144083 260 321 3.53E-19 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 18 324 1.5E-71 T 23-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 Gene3D G3DSA:1.20.58.340 249 324 6.4E-26 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 SUPERFAMILY SSF143865 5 257 7.59E-74 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 PANTHER PTHR21535 17 324 1.9E-56 T 23-04-2016 NIAKO_RS35015 90b0096d18a547117077f05e8dd27e3f 324 Pfam PF01544 CorA-like Mg2+ transporter protein 32 320 5.2E-68 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 Gene3D G3DSA:3.80.10.10 54 345 1.2E-55 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SMART SM00368 244 271 6.9 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SMART SM00368 188 215 43.0 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SMART SM00368 77 104 24.0 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SMART SM00368 216 243 0.0026 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SMART SM00368 105 132 0.45 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 SUPERFAMILY SSF52047 55 346 1.28E-50 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 PANTHER PTHR24106 55 336 3.6E-48 T 23-04-2016 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 Pfam PF13516 Leucine Rich repeat 216 237 5.3E-6 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 NIAKO_RS29420 3c426cfc0c82604efe35e4cbd889e969 368 Pfam PF13516 Leucine Rich repeat 244 265 0.015 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 NIAKO_RS12140 adc5727032606e88ecebef7c5326c83f 426 Gene3D G3DSA:2.130.10.10 133 394 3.1E-13 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS12140 adc5727032606e88ecebef7c5326c83f 426 SUPERFAMILY SSF50969 130 394 1.8E-14 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS31795 709be8f367a471262062096be338c527 454 Gene3D G3DSA:3.40.710.10 37 333 1.6E-75 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31795 709be8f367a471262062096be338c527 454 Pfam PF00144 Beta-lactamase 38 337 2.3E-58 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS31795 709be8f367a471262062096be338c527 454 SUPERFAMILY SSF56601 22 335 2.15E-81 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31795 709be8f367a471262062096be338c527 454 Pfam PF11954 Domain of unknown function (DUF3471) 361 442 6.6E-10 T 23-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal NIAKO_RS31795 709be8f367a471262062096be338c527 454 PANTHER PTHR22935 20 327 9.7E-72 T 23-04-2016 NIAKO_RS30845 aa09149842259d5714f728bc4ab5fdfd 200 SUPERFAMILY SSF143422 16 105 1.7E-14 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS30845 aa09149842259d5714f728bc4ab5fdfd 200 Gene3D G3DSA:3.30.70.1290 17 135 9.1E-11 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS30845 aa09149842259d5714f728bc4ab5fdfd 200 Pfam PF01797 Transposase IS200 like 34 92 1.6E-5 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 194 209 - T 23-04-2016 IPR019826 Carboxylesterase type B, active site NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 Pfam PF00135 Carboxylesterase family 26 486 7.7E-104 T 23-04-2016 IPR002018 Carboxylesterase, type B NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 Gene3D G3DSA:3.40.50.1820 22 503 1.6E-135 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 SUPERFAMILY SSF53474 27 485 2.89E-115 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 94 104 - T 23-04-2016 IPR019819 Carboxylesterase type B, conserved site NIAKO_RS11890 4b27327cbf403cdc6efd25de07a1c1a6 516 PANTHER PTHR11559 6 503 2.1E-144 T 23-04-2016 NIAKO_RS24350 6a2ecefaf73fc100ca0728c1c45e4a14 158 Pfam PF03061 Thioesterase superfamily 23 95 2.2E-17 T 23-04-2016 IPR006683 Thioesterase domain NIAKO_RS24350 6a2ecefaf73fc100ca0728c1c45e4a14 158 SUPERFAMILY SSF54637 8 156 7.01E-42 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS24350 6a2ecefaf73fc100ca0728c1c45e4a14 158 Gene3D G3DSA:3.10.129.10 9 149 4.5E-43 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS24350 6a2ecefaf73fc100ca0728c1c45e4a14 158 PANTHER PTHR11049 9 155 3.3E-50 T 23-04-2016 NIAKO_RS23240 8c4b370a3718a75d01dd130b583fe6f3 532 PANTHER PTHR11533 273 523 9.5E-27 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS23240 8c4b370a3718a75d01dd130b583fe6f3 532 Pfam PF01433 Peptidase family M1 282 432 8.8E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS23240 8c4b370a3718a75d01dd130b583fe6f3 532 Gene3D G3DSA:1.10.390.10 387 521 1.4E-14 T 23-04-2016 NIAKO_RS23240 8c4b370a3718a75d01dd130b583fe6f3 532 PANTHER PTHR11533:SF163 273 523 9.5E-27 T 23-04-2016 NIAKO_RS23240 8c4b370a3718a75d01dd130b583fe6f3 532 SUPERFAMILY SSF55486 292 523 6.04E-34 T 23-04-2016 NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 Pfam PF16344 Domain of unknown function (DUF4974) 308 411 1.1E-17 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 PANTHER PTHR30273 1 128 1.0E-63 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 PANTHER PTHR30273 192 415 1.0E-63 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 Pfam PF04773 FecR protein 190 286 6.4E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 PANTHER PTHR30273:SF2 1 128 1.0E-63 T 23-04-2016 NIAKO_RS13305 e08d68aac138d58e879c111c5d89f13a 415 PANTHER PTHR30273:SF2 192 415 1.0E-63 T 23-04-2016 NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 PANTHER PTHR33990:SF2 144 305 9.4E-46 T 23-04-2016 NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 SUPERFAMILY SSF54593 1 133 3.49E-27 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 144 264 5.7E-38 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 132 2.8E-30 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 SUPERFAMILY SSF54593 157 302 8.04E-36 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 PANTHER PTHR33990 144 305 9.4E-46 T 23-04-2016 NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 Gene3D G3DSA:3.10.180.10 143 275 4.0E-37 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS06800 5a72493c0184071823d30ad29cf74d74 305 Gene3D G3DSA:3.10.180.10 1 137 1.5E-40 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS07655 91482a7fbaac09ebc4dae46419b78965 164 SUPERFAMILY SSF46785 25 131 1.42E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS07655 91482a7fbaac09ebc4dae46419b78965 164 PANTHER PTHR33204:SF10 16 135 3.6E-24 T 23-04-2016 NIAKO_RS07655 91482a7fbaac09ebc4dae46419b78965 164 Pfam PF01638 HxlR-like helix-turn-helix 38 124 1.3E-16 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS07655 91482a7fbaac09ebc4dae46419b78965 164 PANTHER PTHR33204 16 135 3.6E-24 T 23-04-2016 NIAKO_RS07655 91482a7fbaac09ebc4dae46419b78965 164 Gene3D G3DSA:1.10.10.10 22 123 6.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS32305 bda5cd1a8f7ac9e4deb55977e6737ec2 374 SUPERFAMILY SSF55729 140 369 1.15E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32305 bda5cd1a8f7ac9e4deb55977e6737ec2 374 SUPERFAMILY SSF55729 1 112 1.15E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32305 bda5cd1a8f7ac9e4deb55977e6737ec2 374 Gene3D G3DSA:3.40.630.30 192 371 1.2E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32305 bda5cd1a8f7ac9e4deb55977e6737ec2 374 PANTHER PTHR41368 1 374 1.5E-80 T 23-04-2016 NIAKO_RS09195 7be09371d190247a6475f5ab0c3b3439 211 Pfam PF00156 Phosphoribosyl transferase domain 9 191 3.6E-25 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS09195 7be09371d190247a6475f5ab0c3b3439 211 PANTHER PTHR31299 1 205 3.4E-65 T 23-04-2016 NIAKO_RS09195 7be09371d190247a6475f5ab0c3b3439 211 SUPERFAMILY SSF53271 1 205 3.02E-41 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS09195 7be09371d190247a6475f5ab0c3b3439 211 Gene3D G3DSA:3.40.50.2020 2 198 2.2E-32 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS30260 e526b2499e8cc05a5384355637fca87f 473 SUPERFAMILY SSF52833 328 452 9.18E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS30260 e526b2499e8cc05a5384355637fca87f 473 Pfam PF00578 AhpC/TSA family 333 451 2.2E-15 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS30260 e526b2499e8cc05a5384355637fca87f 473 Gene3D G3DSA:3.40.30.10 329 460 8.2E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS20865 d756d12c038603d7a9997eb151ad2267 449 SUPERFAMILY SSF56935 99 281 4.4E-8 T 23-04-2016 NIAKO_RS20865 d756d12c038603d7a9997eb151ad2267 449 SUPERFAMILY SSF56935 320 448 4.4E-8 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 PANTHER PTHR30218:SF0 5 679 7.3E-240 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 SUPERFAMILY SSF56024 500 677 1.57E-65 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 SUPERFAMILY SSF140356 3 107 3.14E-27 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Gene3D G3DSA:3.30.870.10 497 678 4.3E-68 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Pfam PF13090 Polyphosphate kinase C-terminal domain 324 671 7.2E-137 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Gene3D G3DSA:3.30.1840.10 108 295 7.7E-42 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 5 674 2.1E-203 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 PANTHER PTHR30218 5 679 7.3E-240 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Pfam PF02503 Polyphosphate kinase middle domain 124 313 1.7E-39 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 SUPERFAMILY SSF56024 310 483 1.73E-45 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Pfam PF13089 Polyphosphate kinase N-terminal domain 5 111 5.9E-30 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 SUPERFAMILY SSF143724 110 301 3.14E-40 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 PIRSF PIRSF015589 1 681 3.3E-217 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Gene3D G3DSA:1.20.58.310 2 82 3.3E-28 T 23-04-2016 NIAKO_RS35665 fd4417d97e65c45d9b1d069e8b9f6914 682 Gene3D G3DSA:3.30.870.10 318 483 1.6E-57 T 23-04-2016 NIAKO_RS11840 bc360e42382df9d4e194630c5d98f97f 491 Pfam PF14322 Starch-binding associating with outer membrane 36 248 4.9E-27 T 23-04-2016 NIAKO_RS11840 bc360e42382df9d4e194630c5d98f97f 491 SUPERFAMILY SSF48452 32 491 4.74E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11840 bc360e42382df9d4e194630c5d98f97f 491 Pfam PF07980 SusD family 337 491 4.3E-33 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11840 bc360e42382df9d4e194630c5d98f97f 491 Gene3D G3DSA:1.25.40.10 228 434 8.7E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 Pfam PF12705 PD-(D/E)XK nuclease superfamily 289 457 8.0E-8 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 Pfam PF13087 AAA domain 874 1078 6.5E-25 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 Pfam PF13086 AAA domain 678 762 6.4E-12 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 Pfam PF13086 AAA domain 781 852 6.3E-16 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 PANTHER PTHR10887 872 1108 1.7E-95 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 PANTHER PTHR10887 386 854 1.7E-95 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 SUPERFAMILY SSF52540 675 1084 8.33E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 Gene3D G3DSA:3.40.50.300 666 917 1.1E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 PANTHER PTHR10887:SF340 872 1108 1.7E-95 T 23-04-2016 NIAKO_RS09725 8d544e36fce0cd0b83c30363dd8205d9 1118 PANTHER PTHR10887:SF340 386 854 1.7E-95 T 23-04-2016 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 Gene3D G3DSA:3.20.20.80 20 347 4.0E-112 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PIRSF PIRSF006336 8 600 9.1E-185 T 23-04-2016 IPR026283 Beta-galactosidase 1-like GO:0004565 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 313 329 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 53 71 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 163 178 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 108 127 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 542 558 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 32 49 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PRINTS PR00742 Glycosyl hydrolase family 35 signature 249 264 2.5E-44 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PANTHER PTHR23421 20 600 3.9E-247 T 23-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 SUPERFAMILY SSF51445 24 347 6.48E-89 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 Gene3D G3DSA:2.60.120.260 462 594 1.4E-29 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 Pfam PF01301 Glycosyl hydrolases family 35 29 344 2.7E-107 T 23-04-2016 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 SUPERFAMILY SSF49785 459 589 2.89E-28 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS15840 7522e2a5754fcd0fb11438b50db3152b 602 PANTHER PTHR23421:SF13 20 600 3.9E-247 T 23-04-2016 NIAKO_RS32870 7a733999063dcb0cb43ab56150f2c51f 241 PANTHER PTHR22572:SF15 5 239 9.7E-34 T 23-04-2016 NIAKO_RS32870 7a733999063dcb0cb43ab56150f2c51f 241 Pfam PF00483 Nucleotidyl transferase 6 144 1.3E-15 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS32870 7a733999063dcb0cb43ab56150f2c51f 241 Gene3D G3DSA:3.90.550.10 4 240 6.1E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS32870 7a733999063dcb0cb43ab56150f2c51f 241 PANTHER PTHR22572 5 239 9.7E-34 T 23-04-2016 NIAKO_RS32870 7a733999063dcb0cb43ab56150f2c51f 241 SUPERFAMILY SSF53448 4 240 2.6E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 SMART SM00850 161 252 8.0E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 PANTHER PTHR26402 5 121 1.2E-27 T 23-04-2016 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 Gene3D G3DSA:3.40.50.2300 2 122 5.7E-32 T 23-04-2016 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 SUPERFAMILY SSF52172 4 126 1.71E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 Pfam PF00072 Response regulator receiver domain 7 117 3.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 Pfam PF04397 LytTr DNA-binding domain 165 249 1.3E-15 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 Gene3D G3DSA:2.40.50.40 153 220 2.9E-15 T 23-04-2016 NIAKO_RS07385 00116770063a0c1e6f3597aa2c3dfc26 254 SMART SM00448 5 117 9.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS21635 da3069091c1688ee3358baab02a1a54d 135 PANTHER PTHR33452 15 135 2.7E-13 T 23-04-2016 NIAKO_RS21635 da3069091c1688ee3358baab02a1a54d 135 Pfam PF07681 DoxX 18 99 8.8E-11 T 23-04-2016 IPR032808 DoxX family NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 PANTHER PTHR15032 179 364 5.9E-13 T 23-04-2016 NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 SMART SM00849 256 427 0.007 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 Pfam PF13483 Beta-lactamase superfamily domain 252 425 1.5E-12 T 23-04-2016 NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 SUPERFAMILY SSF56281 457 495 1.57E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 SUPERFAMILY SSF56281 250 427 1.57E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 Gene3D G3DSA:3.60.15.10 246 316 2.4E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS11510 61293487950703dffc155b16099f3ab9 551 Gene3D G3DSA:3.60.15.10 350 496 2.4E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS18495 9b3278e4cc2b8fcee90d3d5ee9ade31f 103 Gene3D G3DSA:3.20.20.80 21 96 8.2E-17 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS18495 9b3278e4cc2b8fcee90d3d5ee9ade31f 103 SUPERFAMILY SSF51445 24 96 2.53E-17 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS18495 9b3278e4cc2b8fcee90d3d5ee9ade31f 103 PANTHER PTHR10030 1 91 2.3E-27 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS18495 9b3278e4cc2b8fcee90d3d5ee9ade31f 103 PANTHER PTHR10030:SF28 1 91 2.3E-27 T 23-04-2016 NIAKO_RS07815 9f9d13269beb5763c6fba77f8ca673a9 343 PANTHER PTHR34220 40 342 3.1E-62 T 23-04-2016 NIAKO_RS07815 9f9d13269beb5763c6fba77f8ca673a9 343 PANTHER PTHR34220:SF1 40 342 3.1E-62 T 23-04-2016 NIAKO_RS07815 9f9d13269beb5763c6fba77f8ca673a9 343 SUPERFAMILY SSF55874 212 318 2.55E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS07815 9f9d13269beb5763c6fba77f8ca673a9 343 Pfam PF06580 Histidine kinase 158 235 6.2E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS07815 9f9d13269beb5763c6fba77f8ca673a9 343 Gene3D G3DSA:3.30.565.10 207 292 6.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS12500 b77116db9b88f93f764cb0926e9e7283 528 Pfam PF12771 Starch-binding associating with outer membrane 1 527 3.0E-59 T 23-04-2016 NIAKO_RS12500 b77116db9b88f93f764cb0926e9e7283 528 SUPERFAMILY SSF48452 21 526 9.86E-107 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12500 b77116db9b88f93f764cb0926e9e7283 528 PANTHER PTHR35148 2 527 3.4E-42 T 23-04-2016 NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 SUPERFAMILY SSF158446 7 119 3.66E-33 T 23-04-2016 NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 Pfam PF05635 23S rRNA-intervening sequence protein 8 111 2.1E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 PANTHER PTHR38471:SF2 4 125 1.5E-24 T 23-04-2016 NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 Gene3D G3DSA:1.20.1440.60 4 119 9.1E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 PANTHER PTHR38471 4 125 1.5E-24 T 23-04-2016 NIAKO_RS21510 af7addb22a08bd29faed580bc8c3bcac 137 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 13 119 2.1E-31 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 PANTHER PTHR32282:SF2 17 199 0.0 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 PANTHER PTHR32282:SF2 216 936 0.0 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:1.20.1580.10 109 146 2.6E-47 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:1.20.1580.10 407 478 2.6E-47 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:1.20.1580.10 272 304 2.6E-47 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.40.50.300 16 106 1.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.40.50.300 820 936 1.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.40.50.300 479 599 1.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.40.50.300 611 684 1.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 21 923 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.30.1490.20 149 170 4.8E-10 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:3.30.1490.20 222 271 4.8E-10 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Pfam PF00005 ABC transporter 622 860 2.4E-7 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:1.20.1580.10 693 819 2.4E-45 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 PANTHER PTHR32282 17 199 0.0 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 PANTHER PTHR32282 216 936 0.0 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 SUPERFAMILY SSF52540 620 911 5.22E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 Gene3D G3DSA:1.10.8.280 306 388 2.4E-14 T 23-04-2016 NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 SUPERFAMILY SSF52540 431 563 3.39E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS36180 2e0d11485eceecd16d510d400e36e6a9 937 SUPERFAMILY SSF52540 23 206 3.39E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33390 0aa240e86ba82601897f9c44a69e5d7b 248 PANTHER PTHR22916 1 248 2.6E-75 T 23-04-2016 NIAKO_RS33390 0aa240e86ba82601897f9c44a69e5d7b 248 SUPERFAMILY SSF53448 2 203 2.97E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS33390 0aa240e86ba82601897f9c44a69e5d7b 248 Pfam PF00535 Glycosyl transferase family 2 4 160 2.3E-26 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS33390 0aa240e86ba82601897f9c44a69e5d7b 248 Gene3D G3DSA:3.90.550.10 1 214 1.7E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS33390 0aa240e86ba82601897f9c44a69e5d7b 248 PANTHER PTHR22916:SF4 1 248 2.6E-75 T 23-04-2016 NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 SUPERFAMILY SSF52218 1 198 5.28E-50 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 Pfam PF02525 Flavodoxin-like fold 2 199 3.3E-44 T 23-04-2016 IPR003680 Flavodoxin-like fold NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 PANTHER PTHR10204 1 201 4.9E-48 T 23-04-2016 NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 201 29.098 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 Gene3D G3DSA:3.40.50.360 1 197 3.7E-60 T 23-04-2016 IPR029039 Flavoprotein-like domain NIAKO_RS12480 f7a9d0403c24b30b100a3ee09e34a34c 202 PANTHER PTHR10204:SF16 1 201 4.9E-48 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 SUPERFAMILY SSF53067 6 282 9.58E-28 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 PIRSF PIRSF000538 4 559 1.3E-51 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 PANTHER PTHR10196:SF62 4 564 9.6E-197 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 SUPERFAMILY SSF53067 284 350 1.31E-49 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 SUPERFAMILY SSF53067 377 549 1.31E-49 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 Gene3D G3DSA:3.30.420.40 2 282 2.2E-38 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 PANTHER PTHR10196 4 564 9.6E-197 T 23-04-2016 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 282 3.9E-13 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 6 553 2.6E-179 T 23-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 293 506 4.8E-36 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NIAKO_RS17885 c3c2ad93353c7d38461299c788c70f2a 565 Gene3D G3DSA:3.30.420.40 285 548 7.7E-54 T 23-04-2016 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 Gene3D G3DSA:1.50.10.10 200 390 5.4E-6 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 PANTHER PTHR31151:SF0 45 559 9.1E-180 T 23-04-2016 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 SUPERFAMILY SSF48208 94 138 7.03E-11 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 SUPERFAMILY SSF48208 172 390 7.03E-11 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 49 558 9.0E-148 T 23-04-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 NIAKO_RS25845 83052d457c35bebdb13dd631fc24b939 786 PANTHER PTHR31151 45 559 9.1E-180 T 23-04-2016 NIAKO_RS06240 3142dac6b155718bc5bb7bcaa8230fbb 365 PIRSF PIRSF005622 1 364 2.6E-153 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 NIAKO_RS06240 3142dac6b155718bc5bb7bcaa8230fbb 365 PANTHER PTHR30149 2 361 1.7E-187 T 23-04-2016 NIAKO_RS06240 3142dac6b155718bc5bb7bcaa8230fbb 365 PANTHER PTHR30149:SF0 2 361 1.7E-187 T 23-04-2016 NIAKO_RS06240 3142dac6b155718bc5bb7bcaa8230fbb 365 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 361 1.5E-146 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 NIAKO_RS06240 3142dac6b155718bc5bb7bcaa8230fbb 365 Pfam PF01924 Hydrogenase formation hypA family 12 358 9.4E-150 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 NIAKO_RS16680 f37357a5597cc729ddc7d97563f85064 126 Gene3D G3DSA:1.20.5.780 12 48 1.4E-4 T 23-04-2016 NIAKO_RS16680 f37357a5597cc729ddc7d97563f85064 126 Pfam PF05713 Bacterial mobilisation protein (MobC) 68 112 9.3E-11 T 23-04-2016 IPR008687 Bacterial mobilisation NIAKO_RS06265 553eec2e63d627bbee059c5910abfba7 303 Gene3D G3DSA:3.40.50.1110 199 296 3.0E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS06265 553eec2e63d627bbee059c5910abfba7 303 SUPERFAMILY SSF52266 199 296 3.48E-8 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 PANTHER PTHR26402 230 324 3.2E-16 T 23-04-2016 NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 SMART SM00862 247 321 8.1E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 Pfam PF00486 Transcriptional regulatory protein, C terminal 249 321 3.3E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 PANTHER PTHR26402:SF606 230 324 3.2E-16 T 23-04-2016 NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 Gene3D G3DSA:1.10.10.10 229 322 4.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS12095 389005aaf08ba2ba4cad22a59562210d 329 SUPERFAMILY SSF46894 229 323 1.79E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS07715 31218c85fe16fd8850c0a9e77d374806 338 Pfam PF14870 Photosynthesis system II assembly factor YCF48 42 113 2.5E-7 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain NIAKO_RS07715 31218c85fe16fd8850c0a9e77d374806 338 Gene3D G3DSA:2.130.10.140 36 311 7.2E-24 T 23-04-2016 NIAKO_RS07715 31218c85fe16fd8850c0a9e77d374806 338 SUPERFAMILY SSF110296 31 196 9.94E-27 T 23-04-2016 NIAKO_RS07715 31218c85fe16fd8850c0a9e77d374806 338 SUPERFAMILY SSF110296 243 306 9.94E-27 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 94 124 1.8E-14 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 SUPERFAMILY SSF56935 344 693 3.39E-35 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 SUPERFAMILY SSF56935 200 293 3.39E-35 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 SUPERFAMILY SSF56935 758 802 3.39E-35 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 SUPERFAMILY SSF56935 23 142 3.39E-35 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 SUPERFAMILY SSF56935 831 880 3.39E-35 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 73 910 9.5E-130 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 118 5.0E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 PANTHER PTHR11532:SF57 21 295 6.4E-116 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 PANTHER PTHR11532:SF57 439 908 6.4E-116 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 PANTHER PTHR11532 21 295 6.4E-116 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 PANTHER PTHR11532 439 908 6.4E-116 T 23-04-2016 NIAKO_RS12010 085f8a7c3a1af0235d7df8a80e95a1f9 910 Gene3D G3DSA:2.170.130.10 74 126 9.1E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS14655 57e85b33f340c2c3ad851ef9d6193d31 1049 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 964 1029 8.3E-13 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS14655 57e85b33f340c2c3ad851ef9d6193d31 1049 Pfam PF13585 C-terminal domain of CHU protein family 963 1047 4.1E-20 T 23-04-2016 NIAKO_RS16240 786bd74d9270558de2fb122b6de65897 96 Pfam PF01381 Helix-turn-helix 18 71 2.0E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS16240 786bd74d9270558de2fb122b6de65897 96 SUPERFAMILY SSF47413 7 75 5.38E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16240 786bd74d9270558de2fb122b6de65897 96 Gene3D G3DSA:1.10.260.40 7 78 3.9E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16240 786bd74d9270558de2fb122b6de65897 96 SMART SM00530 16 71 7.6E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 PANTHER PTHR11773:SF1 6 973 0.0 T 23-04-2016 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 PANTHER PTHR11773 6 973 0.0 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 SUPERFAMILY SSF53383 14 438 1.85E-94 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 5 971 24.17 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 14 965 0.0 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 SUPERFAMILY SSF53383 481 901 4.78E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 SUPERFAMILY SSF53383 944 967 4.78E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 Gene3D G3DSA:3.40.640.10 504 740 1.3E-41 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 Gene3D G3DSA:3.40.640.10 81 308 1.8E-9 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 Pfam PF02347 Glycine cleavage system P-protein 460 753 4.0E-15 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NIAKO_RS04580 f5c408d07b93d36634fcab124b45b1ad 976 Pfam PF02347 Glycine cleavage system P-protein 13 439 1.3E-174 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NIAKO_RS13370 0c52c8561adaa1444fd449a7f66916cf 566 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 73 233 4.1E-19 T 23-04-2016 NIAKO_RS13370 0c52c8561adaa1444fd449a7f66916cf 566 PANTHER PTHR33908 7 409 1.5E-35 T 23-04-2016 NIAKO_RS28545 3d26a6c76edc4c037ee639387d489aac 231 PANTHER PTHR11907:SF9 12 231 2.7E-35 T 23-04-2016 NIAKO_RS28545 3d26a6c76edc4c037ee639387d489aac 231 PANTHER PTHR11907 12 231 2.7E-35 T 23-04-2016 NIAKO_RS28545 3d26a6c76edc4c037ee639387d489aac 231 Gene3D G3DSA:3.40.50.2020 29 222 2.7E-26 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS28545 3d26a6c76edc4c037ee639387d489aac 231 SUPERFAMILY SSF53271 71 227 1.05E-21 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS14155 36b8a5c0efd87b5b22f4c5cd3f3fe9c6 238 Gene3D G3DSA:3.40.50.720 26 237 9.5E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14155 36b8a5c0efd87b5b22f4c5cd3f3fe9c6 238 Pfam PF13460 NAD(P)H-binding 33 227 3.5E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14155 36b8a5c0efd87b5b22f4c5cd3f3fe9c6 238 PANTHER PTHR15020:SF29 25 238 5.9E-62 T 23-04-2016 NIAKO_RS14155 36b8a5c0efd87b5b22f4c5cd3f3fe9c6 238 SUPERFAMILY SSF51735 25 234 1.16E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14155 36b8a5c0efd87b5b22f4c5cd3f3fe9c6 238 PANTHER PTHR15020 25 238 5.9E-62 T 23-04-2016 NIAKO_RS20370 714aed940fef568b91d860b0317943a9 86 Gene3D G3DSA:2.160.20.10 23 83 4.4E-8 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS20370 714aed940fef568b91d860b0317943a9 86 SUPERFAMILY SSF51126 46 82 1.88E-6 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS06050 5e0063933421ded3d1a15a8ad4446b3b 367 PIRSF PIRSF018266 19 364 1.0E-41 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS06050 5e0063933421ded3d1a15a8ad4446b3b 367 Pfam PF04773 FecR protein 150 240 3.5E-15 T 23-04-2016 IPR006860 FecR protein NIAKO_RS06050 5e0063933421ded3d1a15a8ad4446b3b 367 PANTHER PTHR30273 8 366 2.4E-49 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS06050 5e0063933421ded3d1a15a8ad4446b3b 367 PANTHER PTHR30273:SF2 8 366 2.4E-49 T 23-04-2016 NIAKO_RS06050 5e0063933421ded3d1a15a8ad4446b3b 367 Pfam PF16344 Domain of unknown function (DUF4974) 259 358 1.5E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS31355 58c7684f268ab03015ca2e6af6ad2ef3 647 SUPERFAMILY SSF55486 332 553 3.8E-37 T 23-04-2016 NIAKO_RS31355 58c7684f268ab03015ca2e6af6ad2ef3 647 PANTHER PTHR11533 375 552 4.4E-16 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS31355 58c7684f268ab03015ca2e6af6ad2ef3 647 Gene3D G3DSA:1.10.390.10 412 552 1.9E-16 T 23-04-2016 NIAKO_RS12545 3fce2271450e5e81fe4442588416597d 182 Pfam PF13858 Protein of unknown function (DUF4199) 15 171 1.4E-26 T 23-04-2016 IPR025250 Protein of unknown function DUF4199 NIAKO_RS36815 52e1ec8623f2c7ea9022ce9cee7a1284 368 PANTHER PTHR34220:SF1 51 368 2.9E-53 T 23-04-2016 NIAKO_RS36815 52e1ec8623f2c7ea9022ce9cee7a1284 368 PANTHER PTHR34220 51 368 2.9E-53 T 23-04-2016 NIAKO_RS36815 52e1ec8623f2c7ea9022ce9cee7a1284 368 Pfam PF06580 Histidine kinase 180 258 1.6E-24 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 Gene3D G3DSA:2.60.40.10 233 325 1.1E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 Gene3D G3DSA:2.60.40.10 1185 1280 1.0E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SUPERFAMILY SSF48726 2410 2489 4.17E-7 T 23-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 482 513 4700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1629 1655 1900.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1541 1572 1400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1039 1064 6800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1881 1912 7100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 757 787 3700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1512 1539 4500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1807 1842 5100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 823 843 4500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 2609 2630 5600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1985 2010 2300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 899 921 2200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 788 821 1100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 520 548 1500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1473 1501 1600.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 685 711 3800.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1845 1876 1000.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SMART SM00710 1771 1804 1200.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 Gene3D G3DSA:2.60.40.10 2410 2490 1.7E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SUPERFAMILY SSF49265 1177 1281 1.61E-8 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS13670 a7dd4708c21a7f00d1f27bc988b74cf4 2876 SUPERFAMILY SSF49265 234 341 1.61E-8 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS23215 5d513bd7eaa0a14dd7883b5bbaf0d0ac 124 SUPERFAMILY SSF52091 2 111 2.94E-15 T 23-04-2016 IPR002645 STAS domain NIAKO_RS23215 5d513bd7eaa0a14dd7883b5bbaf0d0ac 124 Pfam PF01740 STAS domain 13 107 1.4E-9 T 23-04-2016 IPR002645 STAS domain NIAKO_RS23215 5d513bd7eaa0a14dd7883b5bbaf0d0ac 124 Gene3D G3DSA:3.30.750.24 1 108 2.9E-15 T 23-04-2016 IPR002645 STAS domain NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Pfam PF00394 Multicopper oxidase 281 438 7.1E-13 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 SUPERFAMILY SSF49503 553 697 2.98E-35 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Gene3D G3DSA:2.60.40.420 130 256 6.8E-32 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 SUPERFAMILY SSF49503 656 687 5.34E-27 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 SUPERFAMILY SSF49503 348 417 5.34E-27 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 SUPERFAMILY SSF49503 275 309 5.34E-27 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 PANTHER PTHR11709 348 459 1.6E-78 T 23-04-2016 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 PANTHER PTHR11709 568 684 1.6E-78 T 23-04-2016 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 PANTHER PTHR11709 132 312 1.6E-78 T 23-04-2016 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Pfam PF07731 Multicopper oxidase 575 688 6.4E-28 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 ProSitePatterns PS00080 Multicopper oxidases signature 2. 669 680 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Pfam PF07732 Multicopper oxidase 141 252 6.9E-36 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Gene3D G3DSA:2.60.40.420 276 469 1.1E-29 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 ProSitePatterns PS00079 Multicopper oxidases signature 1. 227 247 - T 23-04-2016 IPR033138 Multicopper oxidases, conserved site NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 ProSitePatterns PS00079 Multicopper oxidases signature 1. 664 684 - T 23-04-2016 IPR033138 Multicopper oxidases, conserved site NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 SUPERFAMILY SSF49503 130 250 2.09E-36 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS21130 d99144e46b2d32d52b75a671299b2462 892 Gene3D G3DSA:2.60.40.420 547 707 8.5E-47 T 23-04-2016 IPR008972 Cupredoxin NIAKO_RS08735 35fa083f79d9c9c1065f2bd9838d100d 231 Gene3D G3DSA:1.20.120.330 157 222 8.9E-7 T 23-04-2016 NIAKO_RS08735 35fa083f79d9c9c1065f2bd9838d100d 231 SUPERFAMILY SSF81593 157 227 2.63E-8 T 23-04-2016 NIAKO_RS08735 35fa083f79d9c9c1065f2bd9838d100d 231 Pfam PF05168 HEPN domain 157 217 4.0E-6 T 23-04-2016 IPR007842 HEPN domain NIAKO_RS37085 77d1322a5722a21525ec5bf386bc9ea9 210 SUPERFAMILY SSF55961 45 177 3.93E-5 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815:SF13 280 559 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815:SF13 82 221 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815:SF13 580 754 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 Gene3D G3DSA:2.40.160.50 574 767 7.3E-8 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815 280 559 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815 82 221 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 PANTHER PTHR12815 580 754 7.5E-15 T 23-04-2016 NIAKO_RS09895 e0697e0d22f664b8f6e6ee3f4627db2b 790 Pfam PF01103 Surface antigen 579 790 4.0E-22 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS35955 a30d163df99719317550a38734c0a31c 211 SUPERFAMILY SSF56925 53 207 2.59E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS35955 a30d163df99719317550a38734c0a31c 211 Gene3D G3DSA:2.40.160.20 52 191 5.6E-8 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS35955 a30d163df99719317550a38734c0a31c 211 Pfam PF13505 Outer membrane protein beta-barrel domain 14 207 1.4E-13 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel NIAKO_RS05285 31a00652510272273640eefe0ffdcf4a 254 Pfam PF03432 Relaxase/Mobilisation nuclease domain 9 220 2.5E-17 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NIAKO_RS14085 e3dc06080959a942a328581e845de506 505 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 229 313 2.1E-11 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS14085 e3dc06080959a942a328581e845de506 505 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 86 113 1.7E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS10615 73e7311a04a4a3b317d214b981904615 310 Pfam PF09992 Phosphodiester glycosidase 79 299 1.4E-34 T 23-04-2016 IPR018711 Phosphodiester glycosidase NIAKO_RS10615 73e7311a04a4a3b317d214b981904615 310 PANTHER PTHR40446 173 309 1.1E-25 T 23-04-2016 NIAKO_RS10615 73e7311a04a4a3b317d214b981904615 310 PANTHER PTHR40446:SF1 173 309 1.1E-25 T 23-04-2016 NIAKO_RS16585 4af99fd68138412c0b93cbc3b5ce5db1 229 SUPERFAMILY SSF52200 8 89 4.45E-6 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS16585 4af99fd68138412c0b93cbc3b5ce5db1 229 Pfam PF13676 TIR domain 9 83 1.8E-7 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS27420 6c935fb4be5b844bb9a16231ae846525 386 SUPERFAMILY SSF53756 9 365 8.37E-29 T 23-04-2016 NIAKO_RS27420 6c935fb4be5b844bb9a16231ae846525 386 Pfam PF09314 Domain of unknown function (DUF1972) 7 176 3.1E-21 T 23-04-2016 IPR015393 Domain of unknown function DUF1972 NIAKO_RS27420 6c935fb4be5b844bb9a16231ae846525 386 Pfam PF00534 Glycosyl transferases group 1 192 330 6.8E-8 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS24155 14d038ddf6182709f362b947c9103286 197 SMART SM00935 18 189 9.9E-16 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS24155 14d038ddf6182709f362b947c9103286 197 SUPERFAMILY SSF111384 45 189 9.29E-18 T 23-04-2016 IPR024930 Skp domain NIAKO_RS24155 14d038ddf6182709f362b947c9103286 197 Gene3D G3DSA:3.30.910.20 118 189 1.6E-12 T 23-04-2016 NIAKO_RS24155 14d038ddf6182709f362b947c9103286 197 Gene3D G3DSA:3.30.910.20 40 80 1.6E-12 T 23-04-2016 NIAKO_RS24155 14d038ddf6182709f362b947c9103286 197 Pfam PF03938 Outer membrane protein (OmpH-like) 38 188 7.7E-22 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS26555 3742c90896fa6331ec687deac5f0f124 265 PANTHER PTHR13604 50 228 1.2E-24 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS26555 3742c90896fa6331ec687deac5f0f124 265 Pfam PF02586 SOS response associated peptidase (SRAP) 43 225 4.1E-31 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS26555 3742c90896fa6331ec687deac5f0f124 265 SUPERFAMILY SSF143081 28 227 6.28E-36 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS26555 3742c90896fa6331ec687deac5f0f124 265 Gene3D G3DSA:3.90.1680.10 1 227 1.2E-35 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS15810 4454d9637b51e9f88612748b97b3288a 124 SUPERFAMILY SSF46785 15 116 5.46E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15810 4454d9637b51e9f88612748b97b3288a 124 PANTHER PTHR33204 6 112 2.0E-36 T 23-04-2016 NIAKO_RS15810 4454d9637b51e9f88612748b97b3288a 124 Pfam PF01638 HxlR-like helix-turn-helix 27 115 6.9E-30 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS15810 4454d9637b51e9f88612748b97b3288a 124 Gene3D G3DSA:1.10.10.10 6 115 9.7E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 Pfam PF04773 FecR protein 216 311 5.5E-20 T 23-04-2016 IPR006860 FecR protein NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 PANTHER PTHR30273 34 152 2.9E-71 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 PANTHER PTHR30273 218 436 2.9E-71 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 PANTHER PTHR30273:SF2 34 152 2.9E-71 T 23-04-2016 NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 PANTHER PTHR30273:SF2 218 436 2.9E-71 T 23-04-2016 NIAKO_RS35155 960625af9f3be6d507031807deebedea 437 Pfam PF16344 Domain of unknown function (DUF4974) 335 435 4.4E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 390 4.4E-135 T 23-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 PANTHER PTHR22572 6 424 9.7E-151 T 23-04-2016 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 PANTHER PTHR22572:SF119 6 424 9.7E-151 T 23-04-2016 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 Gene3D G3DSA:3.90.550.10 6 342 6.6E-73 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 97 105 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 SUPERFAMILY SSF53448 2 274 6.81E-77 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 SUPERFAMILY SSF53448 371 387 6.81E-77 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 Pfam PF00483 Nucleotidyl transferase 7 272 4.6E-67 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 SUPERFAMILY SSF51161 288 424 1.94E-21 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS10595 d5e6694f61dba1d233308b0e92c9f57e 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 NIAKO_RS04255 4384a74b3f521f41bac0abccd515c591 523 Gene3D G3DSA:2.60.120.260 110 265 9.0E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS04255 4384a74b3f521f41bac0abccd515c591 523 SUPERFAMILY SSF49785 122 267 2.55E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 PANTHER PTHR13779 17 334 2.7E-164 T 23-04-2016 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 SMART SM00382 55 188 3.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 238 4.4E-109 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.0E-34 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Gene3D G3DSA:1.10.10.10 261 330 2.5E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 SUPERFAMILY SSF46785 261 332 7.07E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Gene3D G3DSA:3.40.50.300 24 182 1.1E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 SUPERFAMILY SSF52540 24 251 1.48E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 344 156.328 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 Gene3D G3DSA:1.10.8.60 187 259 3.5E-29 T 23-04-2016 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 331 2.0E-30 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.2E-136 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NIAKO_RS34200 7ccdcadf685bd126d8c8a18c0103bd9d 344 PANTHER PTHR13779:SF25 17 334 2.7E-164 T 23-04-2016 NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 SUPERFAMILY SSF100950 1 188 3.35E-34 T 23-04-2016 NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 183 6.2E-35 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 PIRSF PIRSF006806 1 186 3.4E-34 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 183 9.8E-23 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 Gene3D G3DSA:3.40.50.10420 3 189 2.4E-34 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 PANTHER PTHR23407 1 189 1.0E-25 T 23-04-2016 NIAKO_RS04475 7e8c03b04ed776d890decd34c24b6f91 189 PANTHER PTHR23407:SF1 1 189 1.0E-25 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 PIRSF PIRSF006603 11 461 4.8E-111 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 Pfam PF01554 MatE 34 194 1.7E-26 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 Pfam PF01554 MatE 269 420 4.9E-23 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 PANTHER PTHR11206 15 461 7.3E-80 T 23-04-2016 NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 432 3.4E-62 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NIAKO_RS13615 986dc9f5cc37c6b6e4784f390d86606f 461 PANTHER PTHR11206:SF132 15 461 7.3E-80 T 23-04-2016 NIAKO_RS13520 567118c937d56f2bac068033477d38a7 275 Pfam PF01522 Polysaccharide deacetylase 14 135 6.3E-21 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS13520 567118c937d56f2bac068033477d38a7 275 SUPERFAMILY SSF88713 20 268 4.45E-29 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS13520 567118c937d56f2bac068033477d38a7 275 Gene3D G3DSA:3.20.20.370 19 136 1.0E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS13520 567118c937d56f2bac068033477d38a7 275 PANTHER PTHR10587 23 134 5.8E-18 T 23-04-2016 NIAKO_RS04895 bff4f7c4d67b5dedc39c94770fce168a 436 Pfam PF04966 Carbohydrate-selective porin, OprB family 53 435 6.2E-41 T 23-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 NIAKO_RS15210 e134225078d9b9aa96ed4df6f87ca6b8 356 SUPERFAMILY SSF50969 302 341 1.65E-15 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS15210 e134225078d9b9aa96ed4df6f87ca6b8 356 SUPERFAMILY SSF50969 86 256 1.65E-15 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS15210 e134225078d9b9aa96ed4df6f87ca6b8 356 Gene3D G3DSA:2.130.10.10 86 338 1.3E-16 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS25665 19db9986f389ac6b542959702dbbb24e 251 Gene3D G3DSA:2.60.120.200 28 251 1.4E-59 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS25665 19db9986f389ac6b542959702dbbb24e 251 Pfam PF08787 Alginate lyase 34 250 1.8E-39 T 23-04-2016 IPR014895 Alginate lyase 2 NIAKO_RS25665 19db9986f389ac6b542959702dbbb24e 251 SUPERFAMILY SSF49899 28 250 3.01E-49 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 SUPERFAMILY SSF48452 21 491 1.64E-85 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 SUPERFAMILY SSF48452 566 633 1.64E-85 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 Gene3D G3DSA:1.25.40.10 549 583 1.4E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 Gene3D G3DSA:1.25.40.10 423 490 1.4E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 Gene3D G3DSA:1.25.40.10 209 338 1.4E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 Pfam PF07980 SusD family 283 649 2.8E-42 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06580 bcb9501f4ff5e2e80e884a1fd6a76114 650 Pfam PF14322 Starch-binding associating with outer membrane 78 227 8.6E-28 T 23-04-2016 NIAKO_RS12880 ef0d22e746522feb05f599a9d0f8c9f3 827 SUPERFAMILY SSF49464 24 111 2.09E-15 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS12880 ef0d22e746522feb05f599a9d0f8c9f3 827 PANTHER PTHR11532:SF57 3 112 1.6E-16 T 23-04-2016 NIAKO_RS12880 ef0d22e746522feb05f599a9d0f8c9f3 827 Gene3D G3DSA:2.60.40.1120 25 114 8.0E-17 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS12880 ef0d22e746522feb05f599a9d0f8c9f3 827 PANTHER PTHR11532 3 112 1.6E-16 T 23-04-2016 NIAKO_RS12880 ef0d22e746522feb05f599a9d0f8c9f3 827 Pfam PF13715 CarboxypepD_reg-like domain 25 110 6.6E-18 T 23-04-2016 NIAKO_RS06865 a0a2205653b046ec6529c0d6ddd70d16 320 Pfam PF07676 WD40-like Beta Propeller Repeat 239 262 1.7E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller NIAKO_RS06865 a0a2205653b046ec6529c0d6ddd70d16 320 SUPERFAMILY SSF69304 44 265 3.14E-16 T 23-04-2016 NIAKO_RS06865 a0a2205653b046ec6529c0d6ddd70d16 320 Gene3D G3DSA:2.120.10.30 45 263 5.9E-18 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS15105 b787154dc8340bc7e09d3de9c7968860 457 SUPERFAMILY SSF48452 15 456 7.59E-61 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS15105 b787154dc8340bc7e09d3de9c7968860 457 Pfam PF14322 Starch-binding associating with outer membrane 29 225 2.0E-26 T 23-04-2016 NIAKO_RS15105 b787154dc8340bc7e09d3de9c7968860 457 Pfam PF07980 SusD family 336 456 6.7E-15 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS15105 b787154dc8340bc7e09d3de9c7968860 457 Gene3D G3DSA:1.25.40.10 207 396 5.4E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18625 1787762a92fee61aa6acfadfe7d27d8a 338 Gene3D G3DSA:3.40.50.720 29 197 2.5E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18625 1787762a92fee61aa6acfadfe7d27d8a 338 SUPERFAMILY SSF51735 47 319 5.07E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS11985 dfad22b312c81e9086b5e5cf6ea2b484 597 Pfam PF07980 SusD family 311 597 4.7E-58 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11985 dfad22b312c81e9086b5e5cf6ea2b484 597 Pfam PF14322 Starch-binding associating with outer membrane 51 204 5.4E-12 T 23-04-2016 NIAKO_RS11985 dfad22b312c81e9086b5e5cf6ea2b484 597 SUPERFAMILY SSF48452 22 597 2.15E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11985 dfad22b312c81e9086b5e5cf6ea2b484 597 Gene3D G3DSA:1.25.40.10 221 355 4.7E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11985 dfad22b312c81e9086b5e5cf6ea2b484 597 Gene3D G3DSA:1.25.40.10 429 518 4.7E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 6.2E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 6.2E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 Pfam PF12833 Helix-turn-helix domain 216 294 7.5E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 Gene3D G3DSA:1.10.10.60 248 296 9.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 SMART SM00342 210 293 4.8E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 PANTHER PTHR11019:SF50 39 296 3.3E-31 T 23-04-2016 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 PANTHER PTHR11019 39 296 3.3E-31 T 23-04-2016 NIAKO_RS23810 156c1d0e5a304533bebfc9cc46daacec 298 SUPERFAMILY SSF46689 248 296 1.75E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 Gene3D G3DSA:1.10.10.60 227 275 4.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 Pfam PF12833 Helix-turn-helix domain 197 274 1.2E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 Gene3D G3DSA:1.10.10.60 182 226 1.5E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 SMART SM00342 190 273 6.2E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 PANTHER PTHR11019 182 281 1.7E-17 T 23-04-2016 NIAKO_RS36370 5d3e9a4489639ec792f4bdd447292d85 283 SUPERFAMILY SSF46689 226 275 1.75E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 Pfam PF03781 Sulfatase-modifying factor enzyme 1 21 264 3.2E-44 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 SUPERFAMILY SSF56436 133 267 1.72E-50 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 SUPERFAMILY SSF56436 20 93 1.72E-50 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 Gene3D G3DSA:3.90.1580.10 133 269 1.3E-51 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 Gene3D G3DSA:3.90.1580.10 13 93 1.3E-51 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 PANTHER PTHR23150 60 96 2.2E-31 T 23-04-2016 NIAKO_RS18235 b1c2a2ca6a63d164918485f835a07b11 273 PANTHER PTHR23150 134 267 2.2E-31 T 23-04-2016 NIAKO_RS29225 50ef670e72b9224fa0b68787061f3a98 352 Pfam PF10127 Predicted nucleotidyltransferase 11 126 2.2E-24 T 23-04-2016 IPR018775 Nucleotidyltransferase, predicted NIAKO_RS29225 50ef670e72b9224fa0b68787061f3a98 352 Pfam PF10127 Predicted nucleotidyltransferase 250 345 1.5E-4 T 23-04-2016 IPR018775 Nucleotidyltransferase, predicted NIAKO_RS29225 50ef670e72b9224fa0b68787061f3a98 352 PANTHER PTHR34817:SF2 13 125 5.5E-15 T 23-04-2016 NIAKO_RS29225 50ef670e72b9224fa0b68787061f3a98 352 PANTHER PTHR34817 13 125 5.5E-15 T 23-04-2016 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 Pfam PF01055 Glycosyl hydrolases family 31 144 532 6.7E-49 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 SUPERFAMILY SSF51011 457 532 6.04E-11 T 23-04-2016 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 Gene3D G3DSA:3.20.20.70 261 299 9.9E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 Gene3D G3DSA:3.20.20.70 138 215 9.9E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 PANTHER PTHR22762:SF85 149 534 1.7E-84 T 23-04-2016 NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 SUPERFAMILY SSF51445 136 475 1.53E-52 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS31460 038548acc0e9b06da3f17e2bb4f5a55d 534 PANTHER PTHR22762 149 534 1.7E-84 T 23-04-2016 NIAKO_RS26235 869a38e3f395b1a228acf00892055e17 200 PANTHER PTHR30576:SF8 1 189 1.2E-91 T 23-04-2016 NIAKO_RS26235 869a38e3f395b1a228acf00892055e17 200 PANTHER PTHR30576 1 189 1.2E-91 T 23-04-2016 NIAKO_RS26235 869a38e3f395b1a228acf00892055e17 200 Pfam PF02397 Bacterial sugar transferase 7 181 2.9E-55 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS37025 f5732acd07c7366cb516934aab3bd7eb 289 SUPERFAMILY SSF53448 1 229 3.56E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37025 f5732acd07c7366cb516934aab3bd7eb 289 PANTHER PTHR22916 1 228 4.0E-48 T 23-04-2016 NIAKO_RS37025 f5732acd07c7366cb516934aab3bd7eb 289 Gene3D G3DSA:3.90.550.10 2 240 1.0E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37025 f5732acd07c7366cb516934aab3bd7eb 289 Pfam PF00535 Glycosyl transferase family 2 3 162 1.2E-27 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS05340 9b5e9a5923482db2d1d3ce16b04ff16a 111 Gene3D G3DSA:1.10.10.10 57 105 4.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS05340 9b5e9a5923482db2d1d3ce16b04ff16a 111 Pfam PF12728 Helix-turn-helix domain 57 98 5.3E-8 T 23-04-2016 NIAKO_RS05340 9b5e9a5923482db2d1d3ce16b04ff16a 111 SUPERFAMILY SSF46955 57 106 5.95E-8 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS33330 fe9e30f549045f6612825127e9b0cf49 254 Gene3D G3DSA:3.40.50.150 32 219 5.7E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33330 fe9e30f549045f6612825127e9b0cf49 254 SUPERFAMILY SSF53335 16 210 2.35E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS33330 fe9e30f549045f6612825127e9b0cf49 254 Pfam PF05050 Methyltransferase FkbM domain 49 208 5.6E-14 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS33330 fe9e30f549045f6612825127e9b0cf49 254 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 47 185 3.7E-22 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 14 85 20.759 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 PRINTS PR00974 Ribosomal protein S18 family signature 58 72 1.3E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 PRINTS PR00974 Ribosomal protein S18 family signature 50 57 1.3E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 PRINTS PR00974 Ribosomal protein S18 family signature 40 50 1.3E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 PRINTS PR00974 Ribosomal protein S18 family signature 72 82 1.3E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 Pfam PF01084 Ribosomal protein S18 30 80 2.6E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 18 85 3.6E-31 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 Gene3D G3DSA:4.10.640.10 20 85 1.2E-30 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 32 83 1.0E-19 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 SUPERFAMILY SSF46911 11 85 1.06E-27 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS25180 e3cb15dbb71bbef76ad6e0bdbbbbff5c 88 PANTHER PTHR13479 17 84 8.1E-28 T 23-04-2016 NIAKO_RS18885 e8536962252ce256284892002ebfa984 166 PANTHER PTHR39473 12 163 6.8E-17 T 23-04-2016 NIAKO_RS18885 e8536962252ce256284892002ebfa984 166 SUPERFAMILY SSF109854 14 132 5.49E-6 T 23-04-2016 NIAKO_RS18885 e8536962252ce256284892002ebfa984 166 PANTHER PTHR39473:SF1 12 163 6.8E-17 T 23-04-2016 NIAKO_RS29015 808e3d5844f678d08de7d916f7db72be 899 Gene3D G3DSA:1.25.40.10 333 441 3.0E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29015 808e3d5844f678d08de7d916f7db72be 899 SUPERFAMILY SSF48452 337 475 4.93E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06645 c43e08605a12a669627e8aa739f80425 132 Pfam PF16395 Domain of unknown function (DUF5004) 13 129 4.0E-39 T 23-04-2016 IPR032168 Protein of unknown function DUF5004 NIAKO_RS07650 18b9e2088732c759ec2c6af014095fc8 517 SUPERFAMILY SSF53474 57 495 6.46E-79 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07650 18b9e2088732c759ec2c6af014095fc8 517 PANTHER PTHR11802 93 245 9.7E-12 T 23-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 NIAKO_RS07650 18b9e2088732c759ec2c6af014095fc8 517 Gene3D G3DSA:3.40.50.1820 64 472 6.5E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS07650 18b9e2088732c759ec2c6af014095fc8 517 Pfam PF00450 Serine carboxypeptidase 72 289 1.1E-13 T 23-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 NIAKO_RS07650 18b9e2088732c759ec2c6af014095fc8 517 PANTHER PTHR11802:SF30 93 245 9.7E-12 T 23-04-2016 NIAKO_RS15280 0d3564a918b31ad9983df64490b6c994 112 Gene3D G3DSA:1.50.10.10 81 106 1.0E-5 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS15280 0d3564a918b31ad9983df64490b6c994 112 Pfam PF16386 Domain of unknown function 11 60 4.0E-7 T 23-04-2016 IPR032159 Domain of unknown function DUF4995 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 SMART SM00382 363 526 9.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 SMART SM00382 27 316 1.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 Pfam PF00005 ABC transporter 19 168 1.7E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 Pfam PF00005 ABC transporter 355 486 4.8E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 PANTHER PTHR19211 306 523 9.6E-105 T 23-04-2016 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 PANTHER PTHR19211 16 249 9.6E-105 T 23-04-2016 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 SUPERFAMILY SSF52540 4 80 8.6E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 SUPERFAMILY SSF52540 109 230 8.6E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 SUPERFAMILY SSF52540 327 518 1.75E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 Gene3D G3DSA:3.40.50.300 339 519 1.9E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS11040 477e08eb508e08a168d059615e5b9966 528 Gene3D G3DSA:3.40.50.300 3 252 1.4E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02140 7b0ea01de3f1448b833e230e0b28e373 478 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 214 301 1.4E-4 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 NIAKO_RS02140 7b0ea01de3f1448b833e230e0b28e373 478 Gene3D G3DSA:3.20.20.360 211 302 8.6E-10 T 23-04-2016 NIAKO_RS02140 7b0ea01de3f1448b833e230e0b28e373 478 SUPERFAMILY SSF51621 122 366 5.65E-10 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 69 143 6.2E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 Gene3D G3DSA:3.30.1150.10 53 120 1.9E-6 T 23-04-2016 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 SUPERFAMILY SSF74653 63 143 1.7E-14 T 23-04-2016 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 72 134 4.0E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 PANTHER PTHR33446:SF2 54 146 4.2E-14 T 23-04-2016 NIAKO_RS23950 47cb2e657f15def0f9affff9c0b8eb68 148 PANTHER PTHR33446 54 146 4.2E-14 T 23-04-2016 NIAKO_RS06470 bd005fb77af06b03406eb92380fdee69 282 PANTHER PTHR10992 29 282 9.4E-19 T 23-04-2016 NIAKO_RS06470 bd005fb77af06b03406eb92380fdee69 282 Gene3D G3DSA:3.40.50.1820 32 281 1.3E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS06470 bd005fb77af06b03406eb92380fdee69 282 Pfam PF00561 alpha/beta hydrolase fold 41 150 1.2E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS06470 bd005fb77af06b03406eb92380fdee69 282 PANTHER PTHR10992:SF807 29 282 9.4E-19 T 23-04-2016 NIAKO_RS06470 bd005fb77af06b03406eb92380fdee69 282 SUPERFAMILY SSF53474 32 282 1.46E-27 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS00975 14560dc8d54e7b07eae635e09e6cdb64 146 Pfam PF07291 Methylamine utilisation protein MauE 5 112 2.8E-8 T 23-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 NIAKO_RS00450 7d794dc7e0016bcd38c31840572a1781 435 SUPERFAMILY SSF50939 144 244 1.96E-5 T 23-04-2016 IPR011040 Sialidases NIAKO_RS00450 7d794dc7e0016bcd38c31840572a1781 435 Pfam PF15892 BNR repeat-containing family member 56 318 1.6E-92 T 23-04-2016 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 PANTHER PTHR23342 6 240 9.1E-62 T 23-04-2016 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 PIRSF PIRSF000728 1 261 9.6E-72 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 Gene3D G3DSA:3.40.1160.10 4 259 2.1E-71 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 SUPERFAMILY SSF53633 4 260 7.26E-53 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 Pfam PF00696 Amino acid kinase family 5 241 3.9E-36 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 260 24.806 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS28035 5c7b7fc2d00b2fdf7392066c6fb8412b 261 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 240 3.3E-57 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NIAKO_RS22510 d0ad3e658b5524afcee2538e3f1b35a7 110 PANTHER PTHR10160 5 99 9.6E-16 T 23-04-2016 NIAKO_RS22510 d0ad3e658b5524afcee2538e3f1b35a7 110 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 14 99 2.7E-30 T 23-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 NIAKO_RS26475 61d84714a789c225e636ee53138fe72d 687 SUPERFAMILY SSF48208 244 679 1.75E-40 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26475 61d84714a789c225e636ee53138fe72d 687 Gene3D G3DSA:1.50.10.10 309 497 3.0E-7 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS02255 712a2adef4d697658b8474c1a013cc36 277 PANTHER PTHR23088:SF11 16 277 8.6E-113 T 23-04-2016 NIAKO_RS02255 712a2adef4d697658b8474c1a013cc36 277 Pfam PF00795 Carbon-nitrogen hydrolase 16 257 4.5E-62 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS02255 712a2adef4d697658b8474c1a013cc36 277 PANTHER PTHR23088 16 277 8.6E-113 T 23-04-2016 NIAKO_RS02255 712a2adef4d697658b8474c1a013cc36 277 SUPERFAMILY SSF56317 17 275 1.57E-73 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS02255 712a2adef4d697658b8474c1a013cc36 277 Gene3D G3DSA:3.60.110.10 16 276 1.4E-79 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS09270 270494ffd901c85bcb7da4c1a9ff4414 334 Pfam PF02470 MlaD protein 42 116 2.6E-16 T 23-04-2016 IPR003399 Mce/MlaD NIAKO_RS09270 270494ffd901c85bcb7da4c1a9ff4414 334 PANTHER PTHR33371 1 283 2.2E-16 T 23-04-2016 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 Pfam PF04963 Sigma-54 factor, core binding domain 101 293 4.5E-38 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PRINTS PR00045 Sigma-54 factor signature 388 399 5.1E-21 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PRINTS PR00045 Sigma-54 factor signature 372 384 5.1E-21 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PRINTS PR00045 Sigma-54 factor signature 446 464 5.1E-21 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PRINTS PR00045 Sigma-54 factor signature 175 192 5.1E-21 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 47 2.7E-11 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 Pfam PF04552 Sigma-54, DNA binding domain 312 469 2.6E-50 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PIRSF PIRSF000774 1 472 2.4E-116 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 451 458 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 8 469 3.3E-112 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PANTHER PTHR32248 1 473 7.8E-106 T 23-04-2016 NIAKO_RS28715 51add75e966dc6a7568023b573cad3a7 473 PANTHER PTHR32248:SF4 1 473 7.8E-106 T 23-04-2016 NIAKO_RS14705 ac49006dc746bcb89322ce98178124b0 98 Gene3D G3DSA:3.30.1390.10 8 94 3.2E-20 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIAKO_RS14705 ac49006dc746bcb89322ce98178124b0 98 SUPERFAMILY SSF54736 21 95 4.24E-17 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIAKO_RS14705 ac49006dc746bcb89322ce98178124b0 98 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 87 8.1E-19 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 NIAKO_RS07030 ca037f0b5c06c59e8268765d0c7bb595 134 Pfam PF13564 DoxX-like family 16 110 8.4E-11 T 23-04-2016 IPR032808 DoxX family NIAKO_RS06115 4e0b3a847b68503c0879558cbcb2a6d4 215 SUPERFAMILY SSF50475 19 198 8.83E-26 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS06115 4e0b3a847b68503c0879558cbcb2a6d4 215 PANTHER PTHR33798 35 180 5.2E-14 T 23-04-2016 NIAKO_RS06115 4e0b3a847b68503c0879558cbcb2a6d4 215 Pfam PF01613 Flavin reductase like domain 33 167 2.3E-9 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 NIAKO_RS06115 4e0b3a847b68503c0879558cbcb2a6d4 215 Gene3D G3DSA:2.30.110.10 20 193 3.2E-35 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS19880 4b918e45ced527c673ff932c302107cd 184 Gene3D G3DSA:2.40.128.110 50 177 2.9E-16 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS19880 4b918e45ced527c673ff932c302107cd 184 Pfam PF04264 YceI-like domain 48 176 3.0E-12 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS19880 4b918e45ced527c673ff932c302107cd 184 SUPERFAMILY SSF101874 31 177 7.32E-20 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS36925 54bd843e80964c889582cda7c32d18db 186 Pfam PF02656 Domain of unknown function (DUF202) 78 185 1.2E-10 T 23-04-2016 IPR003807 Domain of unknown function DUF202 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 362 5.3E-57 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 283 7.7E-24 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 PANTHER PTHR30469:SF4 40 358 1.4E-51 T 23-04-2016 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 Gene3D G3DSA:2.40.50.100 173 200 1.1E-16 T 23-04-2016 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 Gene3D G3DSA:2.40.50.100 64 97 1.1E-16 T 23-04-2016 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 PANTHER PTHR30469 40 358 1.4E-51 T 23-04-2016 NIAKO_RS20380 dda65d77cbdf804229f103ea6897f8e9 362 SUPERFAMILY SSF111369 52 288 4.18E-23 T 23-04-2016 NIAKO_RS33375 8062e71abb7e8403a5291613929595b5 340 SUPERFAMILY SSF53756 80 338 8.37E-50 T 23-04-2016 NIAKO_RS33375 8062e71abb7e8403a5291613929595b5 340 Pfam PF00534 Glycosyl transferases group 1 160 313 1.3E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS33375 8062e71abb7e8403a5291613929595b5 340 PANTHER PTHR12526:SF399 58 338 1.1E-35 T 23-04-2016 NIAKO_RS33375 8062e71abb7e8403a5291613929595b5 340 Gene3D G3DSA:3.40.50.2000 167 313 3.0E-13 T 23-04-2016 NIAKO_RS33375 8062e71abb7e8403a5291613929595b5 340 PANTHER PTHR12526 58 338 1.1E-35 T 23-04-2016 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 Gene3D G3DSA:2.60.120.260 191 309 1.2E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925:SF40 216 224 3.7E-38 T 23-04-2016 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925:SF40 279 284 3.7E-38 T 23-04-2016 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925:SF40 41 174 3.7E-38 T 23-04-2016 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925:SF40 304 545 3.7E-38 T 23-04-2016 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925 216 224 3.7E-38 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925 279 284 3.7E-38 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925 41 174 3.7E-38 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 PANTHER PTHR22925 304 545 3.7E-38 T 23-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 Pfam PF17132 alpha-L-rhamnosidase 35 859 1.5E-256 T 23-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 SUPERFAMILY SSF49785 902 1052 7.57E-16 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 Gene3D G3DSA:2.60.120.260 903 1011 1.7E-11 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS09420 73a204ccb05f21139c7fe089fd73ff28 1055 SUPERFAMILY SSF49785 182 307 1.91E-6 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS01100 a89fadc598202828cfbf76713dd2c42e 167 SUPERFAMILY SSF46785 2 137 3.02E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01100 a89fadc598202828cfbf76713dd2c42e 167 PANTHER PTHR33221 2 157 7.9E-29 T 23-04-2016 NIAKO_RS01100 a89fadc598202828cfbf76713dd2c42e 167 Gene3D G3DSA:1.10.10.10 1 142 1.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS01100 a89fadc598202828cfbf76713dd2c42e 167 Pfam PF02082 Transcriptional regulator 1 82 1.3E-18 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS01100 a89fadc598202828cfbf76713dd2c42e 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 1.1E-26 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 211 241 1.4E-17 T 23-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532 510 536 1.2E-228 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532 569 1040 1.2E-228 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532 12 428 1.2E-228 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 235 3.8E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 42 1041 9.1E-244 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF56935 437 783 7.69E-83 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF56935 121 259 7.69E-83 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF56935 951 1041 7.69E-83 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF56935 865 909 7.69E-83 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF56935 308 395 7.69E-83 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 SUPERFAMILY SSF49464 42 121 7.19E-16 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Pfam PF13715 CarboxypepD_reg-like domain 43 123 2.9E-14 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.60.40.1120 43 124 1.9E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.40.170.20 952 1040 3.1E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.40.170.20 237 266 3.1E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.40.170.20 873 907 3.1E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.40.170.20 315 799 3.1E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 Gene3D G3DSA:2.170.130.10 125 236 9.7E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532:SF57 510 536 1.2E-228 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532:SF57 569 1040 1.2E-228 T 23-04-2016 NIAKO_RS06395 936292b266f8ec0b57d699638a5c8e0c 1042 PANTHER PTHR11532:SF57 12 428 1.2E-228 T 23-04-2016 NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 SUPERFAMILY SSF52172 4 130 2.7E-22 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 PANTHER PTHR26402:SF557 6 130 1.8E-19 T 23-04-2016 NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 SMART SM00448 6 125 1.2E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 Gene3D G3DSA:3.40.50.2300 3 130 2.3E-26 T 23-04-2016 NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 Pfam PF00072 Response regulator receiver domain 8 123 1.2E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS15395 472abe3774bdef30c867f1d8a2d744eb 136 PANTHER PTHR26402 6 130 1.8E-19 T 23-04-2016 NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 Gene3D G3DSA:3.40.50.150 268 430 1.3E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 Pfam PF08242 Methyltransferase domain 286 378 4.8E-10 T 23-04-2016 IPR013217 Methyltransferase type 12 NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 2 460 4.8E-214 T 23-04-2016 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 SUPERFAMILY SSF53335 267 428 2.86E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 PANTHER PTHR21404 15 463 1.4E-78 T 23-04-2016 IPR026610 3'-RNA ribose 2'-O-methyltransferase, Hen1 GO:0001510|GO:0008171|GO:0008173 NIAKO_RS35355 9cdff5078a77c098178761d3547e54c2 463 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 1 242 1.3E-112 T 23-04-2016 IPR024740 Hen1, N-terminal NIAKO_RS21500 864929041b5054423321eecda6415183 247 Pfam PF13852 Protein of unknown function (DUF4197) 42 240 1.3E-76 T 23-04-2016 IPR025245 Protein of unknown function DUF4197 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 PIRSF PIRSF001092 1 447 1.1E-115 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 SMART SM00812 29 404 5.4E-105 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 SUPERFAMILY SSF51445 33 364 9.96E-92 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 Gene3D G3DSA:3.20.20.80 27 364 3.7E-96 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 PRINTS PR00741 Glycosyl hydrolase family 29 signature 105 121 7.2E-6 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 PRINTS PR00741 Glycosyl hydrolase family 29 signature 347 369 7.2E-6 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 PANTHER PTHR10030 8 441 3.3E-71 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS10950 7ed042fd1d8d5adcd5d9b1f85b6b75f2 450 Pfam PF01120 Alpha-L-fucosidase 20 361 2.1E-95 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 280 366 1.7E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 144 259 9.7E-25 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 PANTHER PTHR30097 275 452 8.2E-54 T 23-04-2016 NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 PANTHER PTHR30097 78 251 8.2E-54 T 23-04-2016 NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 PANTHER PTHR30097:SF3 275 452 8.2E-54 T 23-04-2016 NIAKO_RS30565 c16815c584d659c3936a2902c75d6354 455 PANTHER PTHR30097:SF3 78 251 8.2E-54 T 23-04-2016 NIAKO_RS27980 cd24aa45e0348e91653eabe535c7d3f3 159 Pfam PF14317 YcxB-like protein 94 153 3.2E-7 T 23-04-2016 IPR025588 YcxB-like protein NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 41 295 7.0E-42 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 SUPERFAMILY SSF53187 39 140 4.6E-42 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 SUPERFAMILY SSF53187 220 299 4.6E-42 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 PANTHER PTHR30404:SF0 173 299 1.3E-37 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 PANTHER PTHR30404:SF0 37 151 1.3E-37 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 SMART SM00646 101 295 3.5E-21 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 PANTHER PTHR30404 173 299 1.3E-37 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 PANTHER PTHR30404 37 151 1.3E-37 T 23-04-2016 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 Gene3D G3DSA:3.40.630.40 221 299 2.5E-52 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 Gene3D G3DSA:3.40.630.40 39 122 2.5E-52 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS36440 53e4c42b44049fbe14e21ce80197f0f2 323 Gene3D G3DSA:3.40.630.40 161 174 2.5E-52 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NIAKO_RS37415 372cf2dcf0b3fa367701ee80b2eb386a 251 Pfam PF02517 CAAX protease self-immunity 102 189 1.7E-16 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 NIAKO_RS37415 372cf2dcf0b3fa367701ee80b2eb386a 251 PANTHER PTHR10794 99 196 6.5E-12 T 23-04-2016 NIAKO_RS29595 e0d25193c6cb1c4f53ef09d138e6ec84 162 Gene3D G3DSA:1.20.120.450 15 153 1.3E-16 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS29595 e0d25193c6cb1c4f53ef09d138e6ec84 162 SUPERFAMILY SSF109854 14 159 7.23E-30 T 23-04-2016 NIAKO_RS29595 e0d25193c6cb1c4f53ef09d138e6ec84 162 Pfam PF05163 DinB family 13 158 2.3E-12 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS09935 ed468696394df23be560e09a625787a5 335 Gene3D G3DSA:3.90.1640.10 16 207 3.3E-26 T 23-04-2016 NIAKO_RS09935 ed468696394df23be560e09a625787a5 335 SUPERFAMILY SSF64182 16 314 8.24E-50 T 23-04-2016 NIAKO_RS09935 ed468696394df23be560e09a625787a5 335 Pfam PF01368 DHH family 16 168 4.6E-14 T 23-04-2016 IPR001667 DDH domain NIAKO_RS02890 a4c452d34be99ac0f2c2216028413c35 274 Pfam PF13847 Methyltransferase domain 47 157 4.9E-15 T 23-04-2016 IPR025714 Methyltransferase domain NIAKO_RS02890 a4c452d34be99ac0f2c2216028413c35 274 PANTHER PTHR10108 45 136 6.0E-16 T 23-04-2016 NIAKO_RS02890 a4c452d34be99ac0f2c2216028413c35 274 PANTHER PTHR10108:SF917 45 136 6.0E-16 T 23-04-2016 NIAKO_RS02890 a4c452d34be99ac0f2c2216028413c35 274 SUPERFAMILY SSF53335 29 167 9.95E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS02890 a4c452d34be99ac0f2c2216028413c35 274 Gene3D G3DSA:3.40.50.150 46 151 1.7E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS18505 7adc96fbac3077f46a7ff439ff4fe132 550 PANTHER PTHR11819:SF7 3 499 4.1E-137 T 23-04-2016 NIAKO_RS18505 7adc96fbac3077f46a7ff439ff4fe132 550 Pfam PF00474 Sodium:solute symporter family 40 454 3.3E-78 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS18505 7adc96fbac3077f46a7ff439ff4fe132 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 451 3.5E-98 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS18505 7adc96fbac3077f46a7ff439ff4fe132 550 PANTHER PTHR11819 3 499 4.1E-137 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS26855 ee55489354cb1be0ec53647d8566b3c5 379 Gene3D G3DSA:3.90.550.10 54 281 4.1E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26855 ee55489354cb1be0ec53647d8566b3c5 379 Pfam PF13641 Glycosyltransferase like family 2 53 281 4.7E-16 T 23-04-2016 NIAKO_RS26855 ee55489354cb1be0ec53647d8566b3c5 379 PANTHER PTHR22916 1 243 4.2E-17 T 23-04-2016 NIAKO_RS26855 ee55489354cb1be0ec53647d8566b3c5 379 SUPERFAMILY SSF53448 53 316 4.41E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS25595 d8c644226dd337d3a3a8558a912e533a 119 Gene3D G3DSA:3.30.1460.30 9 98 7.7E-4 T 23-04-2016 IPR007076 TfoX, N-terminal NIAKO_RS25595 d8c644226dd337d3a3a8558a912e533a 119 SUPERFAMILY SSF159894 7 104 6.54E-11 T 23-04-2016 NIAKO_RS25595 d8c644226dd337d3a3a8558a912e533a 119 Pfam PF04993 TfoX N-terminal domain 22 103 5.4E-15 T 23-04-2016 IPR007076 TfoX, N-terminal NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 4.0E-40 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 PANTHER PTHR30615 1 140 2.5E-72 T 23-04-2016 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 PANTHER PTHR30615:SF5 1 140 2.5E-72 T 23-04-2016 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 SUPERFAMILY SSF111038 2 139 1.16E-49 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 139 1.0E-44 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 PIRSF PIRSF004681 1 140 2.5E-46 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 101 119 - T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS23475 fc1626e866ec784b2e4fc5506d9e7737 140 Gene3D G3DSA:2.60.120.460 1 140 1.6E-56 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 Pfam PF07980 SusD family 321 593 4.0E-42 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 Pfam PF14322 Starch-binding associating with outer membrane 23 221 4.0E-30 T 23-04-2016 NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 SUPERFAMILY SSF48452 19 514 2.4E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 SUPERFAMILY SSF48452 561 593 2.4E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 Gene3D G3DSA:1.25.40.10 391 487 1.9E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35170 e657fa87b900647c9f6da6e2b5e9a8cd 593 Gene3D G3DSA:1.25.40.10 201 338 1.9E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07620 1912025474ac7edd07831a71d9d41a33 266 PANTHER PTHR30151 6 266 1.7E-39 T 23-04-2016 NIAKO_RS07620 1912025474ac7edd07831a71d9d41a33 266 SUPERFAMILY SSF161098 68 252 3.92E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS07620 1912025474ac7edd07831a71d9d41a33 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 258 9.6E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS07620 1912025474ac7edd07831a71d9d41a33 266 Gene3D G3DSA:1.10.3720.10 65 258 1.6E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 SMART SM00271 5 63 3.0E-26 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 23-04-2016 IPR018253 DnaJ domain, conserved site NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 SUPERFAMILY SSF46565 3 77 1.83E-24 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 PANTHER PTHR24078 1 67 1.3E-25 T 23-04-2016 NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 Gene3D G3DSA:1.10.287.110 3 70 4.3E-24 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 Pfam PF00226 DnaJ domain 6 67 1.3E-23 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 PRINTS PR00625 DnaJ domain signature 8 26 5.5E-15 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 PRINTS PR00625 DnaJ domain signature 43 63 5.5E-15 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS37035 f80ec545953bf211d812e4e3cc2db9ae 215 PRINTS PR00625 DnaJ domain signature 26 41 5.5E-15 T 23-04-2016 IPR001623 DnaJ domain NIAKO_RS33600 0b0ad5c1aba46b50f39241a51a96802f 248 Pfam PF04338 Protein of unknown function, DUF481 62 229 1.8E-15 T 23-04-2016 IPR007433 Protein of unknown function DUF481 NIAKO_RS11045 d852f2f63797a86bd28e7075bef5717b 480 Pfam PF16407 PKD-like family 21 171 1.2E-27 T 23-04-2016 IPR032183 PKD-like family NIAKO_RS17660 031f23fe068574d9c7c7eda4ba44154c 443 SUPERFAMILY SSF142764 10 438 9.29E-93 T 23-04-2016 NIAKO_RS17660 031f23fe068574d9c7c7eda4ba44154c 443 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 277 434 6.4E-33 T 23-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain NIAKO_RS17660 031f23fe068574d9c7c7eda4ba44154c 443 Pfam PF07005 Putative sugar-binding N-terminal domain 10 251 7.3E-57 T 23-04-2016 IPR010737 Putative sugar-binding, N-terminal domain NIAKO_RS08360 b3ba1a7049f587bdba3815b7a94233a3 213 SMART SM00860 40 193 9.1E-6 T 23-04-2016 IPR018958 SMI1/KNR4-like domain NIAKO_RS08360 b3ba1a7049f587bdba3815b7a94233a3 213 Gene3D G3DSA:3.40.1580.10 26 74 4.1E-5 T 23-04-2016 IPR018958 SMI1/KNR4-like domain NIAKO_RS08360 b3ba1a7049f587bdba3815b7a94233a3 213 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 40 170 6.8E-10 T 23-04-2016 IPR018958 SMI1/KNR4-like domain NIAKO_RS08360 b3ba1a7049f587bdba3815b7a94233a3 213 SUPERFAMILY SSF160631 28 93 9.16E-13 T 23-04-2016 NIAKO_RS08360 b3ba1a7049f587bdba3815b7a94233a3 213 SUPERFAMILY SSF160631 141 200 9.16E-13 T 23-04-2016 NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 PANTHER PTHR18968 12 323 1.7E-114 T 23-04-2016 NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 SUPERFAMILY SSF52518 12 339 3.61E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 202 1.9E-28 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 PANTHER PTHR18968:SF89 12 323 1.7E-114 T 23-04-2016 NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 Gene3D G3DSA:3.40.50.970 21 237 9.1E-88 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS32050 6a74634728ea95633fd5b123aeb3e900 341 Gene3D G3DSA:3.40.50.970 284 327 9.1E-88 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS29350 88998655cd56a81b1483c86e20520a0a 125 Gene3D G3DSA:3.10.450.50 11 122 1.9E-8 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS29350 88998655cd56a81b1483c86e20520a0a 125 SUPERFAMILY SSF54427 8 125 4.02E-13 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 Gene3D G3DSA:3.75.10.10 9 73 3.0E-95 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 Gene3D G3DSA:3.75.10.10 167 481 3.0E-95 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PRINTS PR01466 Bacterial arginine deiminase signature 195 210 1.07E-13 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PRINTS PR01466 Bacterial arginine deiminase signature 167 185 1.07E-13 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PRINTS PR01466 Bacterial arginine deiminase signature 7 27 1.07E-13 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 SUPERFAMILY SSF55909 8 483 9.95E-62 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 Pfam PF02274 Amidinotransferase 110 480 1.1E-45 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737 362 432 4.0E-48 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737 167 318 4.0E-48 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737 9 100 4.0E-48 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737 455 484 4.0E-48 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737:SF13 362 432 4.0E-48 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737:SF13 167 318 4.0E-48 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737:SF13 9 100 4.0E-48 T 23-04-2016 NIAKO_RS04840 c6ab035aa9fea29a77ac464adadd46c1 484 PANTHER PTHR12737:SF13 455 484 4.0E-48 T 23-04-2016 NIAKO_RS23675 ec5b820b7cb7ec5051917015bd9012cf 168 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 4 164 3.0E-24 T 23-04-2016 IPR013343 CRISPR-associated protein Cas4 NIAKO_RS23675 ec5b820b7cb7ec5051917015bd9012cf 168 Pfam PF01930 Domain of unknown function DUF83 6 165 1.3E-50 T 23-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 NIAKO_RS23675 ec5b820b7cb7ec5051917015bd9012cf 168 PANTHER PTHR37168:SF1 1 165 8.3E-51 T 23-04-2016 NIAKO_RS23675 ec5b820b7cb7ec5051917015bd9012cf 168 PANTHER PTHR37168 1 165 8.3E-51 T 23-04-2016 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 Pfam PF07980 SusD family 290 647 1.2E-38 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 SUPERFAMILY SSF48452 615 647 5.06E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 SUPERFAMILY SSF48452 16 378 5.06E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 SUPERFAMILY SSF48452 433 580 5.06E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 Pfam PF14322 Starch-binding associating with outer membrane 20 223 2.8E-9 T 23-04-2016 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 Gene3D G3DSA:1.25.40.10 446 554 2.3E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 Gene3D G3DSA:1.25.40.10 206 294 2.3E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18535 b32f0e8721ef0fa5a2cb8bc3028cd22c 648 Gene3D G3DSA:1.25.40.10 331 332 2.3E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23685 04902349ef59122a5d7a04a356e22829 258 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 9 48 3.3E-8 T 23-04-2016 IPR013422 CRISPR-associated protein Cas5, N-terminal NIAKO_RS16545 2c929908b25793f8c8f953fc76e9ef9a 112 PANTHER PTHR33204 1 110 1.6E-31 T 23-04-2016 NIAKO_RS16545 2c929908b25793f8c8f953fc76e9ef9a 112 Pfam PF01638 HxlR-like helix-turn-helix 21 106 1.0E-26 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type NIAKO_RS16545 2c929908b25793f8c8f953fc76e9ef9a 112 SUPERFAMILY SSF46785 8 109 8.29E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16545 2c929908b25793f8c8f953fc76e9ef9a 112 Gene3D G3DSA:1.10.10.10 7 109 1.0E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS15165 0baa00795c36b0fc08d151545679e77c 265 Pfam PF16132 Domain of unknown function (DUF4843) 36 188 1.1E-25 T 23-04-2016 IPR032299 Protein of unknown function DUF4843 NIAKO_RS35225 13be32c8d978aceb29ece04180f13506 422 Gene3D G3DSA:2.60.120.200 2 153 2.6E-9 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS35225 13be32c8d978aceb29ece04180f13506 422 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 353 421 3.5E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS13850 a2aae93c754aee8577f672d259da7114 155 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 26 131 5.4E-6 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS13850 a2aae93c754aee8577f672d259da7114 155 SUPERFAMILY SSF55961 1 131 5.82E-13 T 23-04-2016 NIAKO_RS13850 a2aae93c754aee8577f672d259da7114 155 Gene3D G3DSA:3.30.530.20 26 132 1.1E-10 T 23-04-2016 IPR023393 START-like domain NIAKO_RS17430 983c041bf0dc13694cd31af846282307 315 PIRSF PIRSF018266 2 315 6.7E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS17430 983c041bf0dc13694cd31af846282307 315 PANTHER PTHR30273:SF2 1 295 6.1E-54 T 23-04-2016 NIAKO_RS17430 983c041bf0dc13694cd31af846282307 315 Pfam PF16344 Domain of unknown function (DUF4974) 211 312 6.5E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS17430 983c041bf0dc13694cd31af846282307 315 Pfam PF04773 FecR protein 107 199 1.3E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS17430 983c041bf0dc13694cd31af846282307 315 PANTHER PTHR30273 1 295 6.1E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS23365 b29ecbce8a153d7aa9975336b6aa19e8 45 Pfam PF03050 Transposase IS66 family 1 45 1.2E-12 T 23-04-2016 IPR004291 Transposase, IS66 NIAKO_RS34530 f5f3c2e19c191af82babc7b3b1ba0b79 345 PANTHER PTHR34220 13 342 1.3E-50 T 23-04-2016 NIAKO_RS34530 f5f3c2e19c191af82babc7b3b1ba0b79 345 Gene3D G3DSA:3.30.565.10 206 339 7.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34530 f5f3c2e19c191af82babc7b3b1ba0b79 345 SUPERFAMILY SSF55874 210 322 2.71E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS34530 f5f3c2e19c191af82babc7b3b1ba0b79 345 Pfam PF06580 Histidine kinase 156 235 2.3E-26 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS00925 f595b60d2edd9aaced4d990273868c92 299 Pfam PF13354 Beta-lactamase enzyme family 49 267 1.3E-46 T 23-04-2016 NIAKO_RS00925 f595b60d2edd9aaced4d990273868c92 299 SUPERFAMILY SSF56601 26 292 1.94E-46 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS00925 f595b60d2edd9aaced4d990273868c92 299 Gene3D G3DSA:3.40.710.10 24 294 1.4E-59 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS00925 f595b60d2edd9aaced4d990273868c92 299 PANTHER PTHR35333:SF3 27 299 8.3E-32 T 23-04-2016 NIAKO_RS00925 f595b60d2edd9aaced4d990273868c92 299 PANTHER PTHR35333 27 299 8.3E-32 T 23-04-2016 NIAKO_RS01710 1e3cfe09e3f9b639489efea5ac1b1935 251 Gene3D G3DSA:3.40.50.150 17 229 1.8E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS01710 1e3cfe09e3f9b639489efea5ac1b1935 251 PANTHER PTHR10108 3 230 6.4E-47 T 23-04-2016 NIAKO_RS01710 1e3cfe09e3f9b639489efea5ac1b1935 251 PANTHER PTHR10108:SF730 3 230 6.4E-47 T 23-04-2016 NIAKO_RS01710 1e3cfe09e3f9b639489efea5ac1b1935 251 SUPERFAMILY SSF53335 3 189 2.05E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS01710 1e3cfe09e3f9b639489efea5ac1b1935 251 Pfam PF08241 Methyltransferase domain 40 127 1.6E-17 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 Gene3D G3DSA:3.40.50.720 2 179 8.4E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 320 46.095 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 PANTHER PTHR10366 3 318 1.0E-110 T 23-04-2016 NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 SUPERFAMILY SSF51735 2 312 9.84E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 PANTHER PTHR10366:SF32 3 318 1.0E-110 T 23-04-2016 NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 305 1.6E-92 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33370 da18e9472577a02f97defd31d186a4b2 321 Gene3D G3DSA:3.90.25.10 185 318 6.1E-28 T 23-04-2016 NIAKO_RS33315 0726f5e0aac1b0f45abacc51d903cfaf 342 Gene3D G3DSA:3.20.20.370 2 149 1.4E-7 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS33315 0726f5e0aac1b0f45abacc51d903cfaf 342 SUPERFAMILY SSF88713 2 185 1.02E-9 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS06720 35c6399f85423ddec91777f7f10e0763 259 PANTHER PTHR31571:SF1 28 257 4.4E-17 T 23-04-2016 NIAKO_RS06720 35c6399f85423ddec91777f7f10e0763 259 Gene3D G3DSA:3.20.20.190 172 258 2.2E-9 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS06720 35c6399f85423ddec91777f7f10e0763 259 PANTHER PTHR31571 28 257 4.4E-17 T 23-04-2016 NIAKO_RS06720 35c6399f85423ddec91777f7f10e0763 259 Pfam PF13653 Glycerophosphoryl diester phosphodiesterase family 215 242 1.1E-6 T 23-04-2016 NIAKO_RS06720 35c6399f85423ddec91777f7f10e0763 259 SUPERFAMILY SSF51695 27 250 2.46E-14 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS24435 c43c0f1d9d019587064afeb38b1d2d12 461 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS24435 c43c0f1d9d019587064afeb38b1d2d12 461 SUPERFAMILY SSF52833 24 147 5.99E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS24435 c43c0f1d9d019587064afeb38b1d2d12 461 Pfam PF13098 Thioredoxin-like domain 40 142 4.4E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS24435 c43c0f1d9d019587064afeb38b1d2d12 461 Gene3D G3DSA:3.40.30.10 33 148 2.6E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 PANTHER PTHR26402 2 207 2.3E-56 T 23-04-2016 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 Gene3D G3DSA:1.10.10.10 120 209 1.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 Gene3D G3DSA:3.40.50.2300 3 119 1.4E-30 T 23-04-2016 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.2E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 SMART SM00421 146 203 7.2E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.0E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 SUPERFAMILY SSF46894 141 209 1.09E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 SMART SM00448 2 115 6.9E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 SUPERFAMILY SSF52172 3 127 3.27E-29 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08870 c40cde6a60e2153b9a3c9515bb2d5ff7 209 PANTHER PTHR26402:SF151 2 207 2.3E-56 T 23-04-2016 NIAKO_RS26095 4eb289e8d5a9c7bd44e630fa630028d2 536 SUPERFAMILY SSF49265 41 127 1.91E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS26095 4eb289e8d5a9c7bd44e630fa630028d2 536 Gene3D G3DSA:2.60.40.10 40 135 6.2E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS26095 4eb289e8d5a9c7bd44e630fa630028d2 536 Pfam PF16318 Domain of unknown function (DUF4957) 259 406 6.2E-11 T 23-04-2016 IPR032530 Domain of unknown function DUF4957 NIAKO_RS26095 4eb289e8d5a9c7bd44e630fa630028d2 536 Pfam PF17161 Domain of unknown function (DUF5123) 422 534 8.1E-19 T 23-04-2016 IPR033427 Domain of unknown function DUF5123 NIAKO_RS26095 4eb289e8d5a9c7bd44e630fa630028d2 536 SUPERFAMILY SSF51126 223 522 7.61E-16 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS31885 54a40a11e0ad7ef14993b0390d131927 271 Gene3D G3DSA:3.40.30.10 58 225 9.6E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS31885 54a40a11e0ad7ef14993b0390d131927 271 Pfam PF02630 SCO1/SenC 51 200 2.8E-20 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC NIAKO_RS31885 54a40a11e0ad7ef14993b0390d131927 271 PANTHER PTHR12151:SF10 65 271 1.0E-26 T 23-04-2016 NIAKO_RS31885 54a40a11e0ad7ef14993b0390d131927 271 PANTHER PTHR12151 65 271 1.0E-26 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC NIAKO_RS31885 54a40a11e0ad7ef14993b0390d131927 271 SUPERFAMILY SSF52833 59 225 4.54E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS10910 e953768f135a56000828df489b46916f 179 SMART SM00867 21 177 2.4E-39 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS10910 e953768f135a56000828df489b46916f 179 PANTHER PTHR34406 1 179 2.9E-26 T 23-04-2016 NIAKO_RS10910 e953768f135a56000828df489b46916f 179 Gene3D G3DSA:2.40.128.110 27 178 1.3E-40 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS10910 e953768f135a56000828df489b46916f 179 PANTHER PTHR34406:SF1 1 179 2.9E-26 T 23-04-2016 NIAKO_RS10910 e953768f135a56000828df489b46916f 179 Pfam PF04264 YceI-like domain 27 176 1.3E-34 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS10910 e953768f135a56000828df489b46916f 179 SUPERFAMILY SSF101874 27 178 5.89E-38 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS32705 14fba24504243dce3034e8cd5d590986 417 Pfam PF01966 HD domain 32 132 8.8E-7 T 23-04-2016 IPR006674 HD domain NIAKO_RS32705 14fba24504243dce3034e8cd5d590986 417 SMART SM00471 27 142 2.4E-6 T 23-04-2016 IPR003607 HD/PDEase domain NIAKO_RS32705 14fba24504243dce3034e8cd5d590986 417 SUPERFAMILY SSF109604 10 197 4.02E-25 T 23-04-2016 NIAKO_RS32705 14fba24504243dce3034e8cd5d590986 417 Gene3D G3DSA:1.10.3210.10 9 131 4.0E-16 T 23-04-2016 IPR006674 HD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SUPERFAMILY SSF49299 535 643 2.49E-19 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SUPERFAMILY SSF49299 646 723 7.46E-18 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SMART SM00089 648 730 1.5E-12 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SMART SM00089 320 395 0.19 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SMART SM00089 566 644 9.5E-9 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Gene3D G3DSA:2.60.40.670 323 391 9.7E-6 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Pfam PF13585 C-terminal domain of CHU protein family 735 814 3.3E-27 T 23-04-2016 NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Pfam PF13573 SprB repeat 248 278 1.3E-8 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 736 817 4.7E-21 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Pfam PF00801 PKD domain 669 716 1.7E-10 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Pfam PF00801 PKD domain 593 626 8.2E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SUPERFAMILY SSF49299 318 394 5.36E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 SUPERFAMILY SSF49299 361 477 4.58E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Gene3D G3DSA:2.60.40.670 395 474 1.5E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Gene3D G3DSA:2.60.40.670 482 563 5.2E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Gene3D G3DSA:2.60.40.670 564 645 6.8E-22 T 23-04-2016 IPR000601 PKD domain NIAKO_RS13680 e308c338a1d1f079801ff2ee13061a35 817 Gene3D G3DSA:2.60.40.670 647 725 2.7E-19 T 23-04-2016 IPR000601 PKD domain NIAKO_RS11750 95b4e4fcc6f3f2b815b3f0dc96c8ebec 529 Pfam PF07980 SusD family 285 529 6.7E-21 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11750 95b4e4fcc6f3f2b815b3f0dc96c8ebec 529 SUPERFAMILY SSF48452 19 529 1.07E-95 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11750 95b4e4fcc6f3f2b815b3f0dc96c8ebec 529 Pfam PF14322 Starch-binding associating with outer membrane 107 226 7.6E-24 T 23-04-2016 NIAKO_RS11750 95b4e4fcc6f3f2b815b3f0dc96c8ebec 529 Gene3D G3DSA:1.25.40.10 207 455 8.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 SUPERFAMILY SSF53756 1 335 8.63E-67 T 23-04-2016 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 PANTHER PTHR30160:SF1 1 336 3.0E-48 T 23-04-2016 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 Gene3D G3DSA:3.40.50.2000 1 138 3.3E-27 T 23-04-2016 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 Gene3D G3DSA:3.40.50.2000 163 335 3.7E-36 T 23-04-2016 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 PANTHER PTHR30160 1 336 3.0E-48 T 23-04-2016 NIAKO_RS01480 184f80f08179464efdacfbae19224c14 336 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 67 269 1.2E-21 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS19650 49c4f86de18b4fce5019787201f5f40e 154 Pfam PF11695 Domain of unknown function (DUF3291) 5 142 5.1E-59 T 23-04-2016 IPR021708 Domain of unknown function DUF3291 NIAKO_RS19650 49c4f86de18b4fce5019787201f5f40e 154 SUPERFAMILY SSF54909 19 116 6.84E-11 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS27365 a6800edd04a450bbea0b200021a19efc 239 Gene3D G3DSA:3.40.50.150 33 202 8.0E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27365 a6800edd04a450bbea0b200021a19efc 239 SUPERFAMILY SSF53335 24 198 2.74E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS27365 a6800edd04a450bbea0b200021a19efc 239 PANTHER PTHR10108:SF779 11 210 6.1E-18 T 23-04-2016 NIAKO_RS27365 a6800edd04a450bbea0b200021a19efc 239 PANTHER PTHR10108 11 210 6.1E-18 T 23-04-2016 NIAKO_RS27365 a6800edd04a450bbea0b200021a19efc 239 Pfam PF13489 Methyltransferase domain 34 194 4.0E-16 T 23-04-2016 NIAKO_RS14915 8245e953436092569003a2ea891792f3 258 SUPERFAMILY SSF48452 161 231 1.05E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14915 8245e953436092569003a2ea891792f3 258 Pfam PF13174 Tetratricopeptide repeat 165 193 0.0047 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14915 8245e953436092569003a2ea891792f3 258 Pfam PF13174 Tetratricopeptide repeat 204 230 0.096 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS14915 8245e953436092569003a2ea891792f3 258 Gene3D G3DSA:1.25.40.10 164 231 1.7E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19435 5465e0128f7631036004f49625a520e2 101 SUPERFAMILY SSF52172 13 100 2.18E-7 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS19435 5465e0128f7631036004f49625a520e2 101 Gene3D G3DSA:3.40.50.2300 4 100 7.5E-7 T 23-04-2016 NIAKO_RS10300 75da50ceb66f4a03e30cd0fca9a46559 173 SUPERFAMILY SSF109854 8 173 6.87E-45 T 23-04-2016 NIAKO_RS10300 75da50ceb66f4a03e30cd0fca9a46559 173 Gene3D G3DSA:1.20.120.450 2 173 2.0E-54 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS10300 75da50ceb66f4a03e30cd0fca9a46559 173 Hamap MF_01256 Putative metal-dependent hydrolase . 1 173 35.693 T 23-04-2016 IPR023774 Putative metal-dependent hydrolase YfiT NIAKO_RS10300 75da50ceb66f4a03e30cd0fca9a46559 173 Pfam PF12867 DinB superfamily 33 164 9.6E-16 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS31840 ca03fbc14abaafd2969f3af132031dd9 197 PANTHER PTHR40394 7 169 8.9E-25 T 23-04-2016 NIAKO_RS31840 ca03fbc14abaafd2969f3af132031dd9 197 PANTHER PTHR40394:SF1 7 169 8.9E-25 T 23-04-2016 NIAKO_RS31840 ca03fbc14abaafd2969f3af132031dd9 197 Pfam PF11821 Protein of unknown function (DUF3341) 5 168 4.0E-59 T 23-04-2016 IPR021776 Protein of unknown function DUF3341 NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 Gene3D G3DSA:2.60.40.670 61 124 5.4E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 Pfam PF00801 PKD domain 63 110 5.4E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 SUPERFAMILY SSF49299 22 124 6.02E-17 T 23-04-2016 IPR000601 PKD domain NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 SUPERFAMILY SSF50998 184 279 3.02E-8 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 SUPERFAMILY SSF50998 316 404 3.02E-8 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS12145 10bc7e117a81b2f2d1e79f597dddfe97 485 SMART SM00089 58 126 2.7E-11 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS06445 a4a87fdf4d7ff63cfa37d942ae90ec06 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 284 2.8E-38 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NIAKO_RS06445 a4a87fdf4d7ff63cfa37d942ae90ec06 301 PANTHER PTHR11795 11 290 5.5E-50 T 23-04-2016 NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 PANTHER PTHR36110 3 309 3.1E-123 T 23-04-2016 NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 PANTHER PTHR36110:SF2 3 309 3.1E-123 T 23-04-2016 NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 Gene3D G3DSA:3.10.180.10 3 130 1.1E-36 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 Gene3D G3DSA:3.10.180.10 132 309 9.4E-42 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 269 3.8E-14 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 107 3.3E-14 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS03825 bf2e415d86f397dd0e65bbb942787779 311 SUPERFAMILY SSF54593 4 293 1.74E-51 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS11440 6cc6a368212b648cde82752e78078509 280 PANTHER PTHR21461 4 276 2.9E-25 T 23-04-2016 NIAKO_RS11440 6cc6a368212b648cde82752e78078509 280 PANTHER PTHR21461:SF15 4 276 2.9E-25 T 23-04-2016 NIAKO_RS11440 6cc6a368212b648cde82752e78078509 280 Pfam PF01697 Glycosyltransferase family 92 4 239 3.4E-21 T 23-04-2016 IPR008166 Glycosyltransferase family 92 NIAKO_RS10035 753350ef364bb41f359766464592510f 176 SUPERFAMILY SSF160574 50 154 3.14E-7 T 23-04-2016 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 82 137 3.0E-10 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 35 155 9.7E-35 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 SUPERFAMILY SSF143243 9 158 1.31E-42 T 23-04-2016 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 115 136 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 PANTHER PTHR10884:SF6 10 163 1.6E-42 T 23-04-2016 NIAKO_RS34770 2ab0217929cc84f31565850c3fe11605 167 PANTHER PTHR10884 10 163 1.6E-42 T 23-04-2016 NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 PANTHER PTHR24220:SF86 7 226 1.2E-92 T 23-04-2016 NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 Gene3D G3DSA:3.40.50.300 5 225 2.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 Pfam PF00005 ABC transporter 24 173 9.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 PANTHER PTHR24220 7 226 1.2E-92 T 23-04-2016 NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 SUPERFAMILY SSF52540 6 225 1.9E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09360 f717ddc4e8950322df76fdb3edbb7192 226 SMART SM00382 33 224 7.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 SUPERFAMILY SSF54001 99 234 1.32E-31 T 23-04-2016 NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 Gene3D G3DSA:3.90.260.10 159 215 7.8E-7 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 PANTHER PTHR33490 8 246 1.3E-63 T 23-04-2016 NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 Pfam PF01841 Transglutaminase-like superfamily 120 213 1.5E-21 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 SMART SM00460 155 215 6.0E-12 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS01360 761d0bf7c8e22b4dc132162a08b5cc7e 276 PANTHER PTHR33490:SF3 8 246 1.3E-63 T 23-04-2016 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 Pfam PF14322 Starch-binding associating with outer membrane 86 223 2.1E-25 T 23-04-2016 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 Pfam PF07980 SusD family 314 678 2.3E-24 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 SUPERFAMILY SSF48452 24 372 6.7E-80 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 SUPERFAMILY SSF48452 421 459 6.7E-80 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 SUPERFAMILY SSF48452 515 676 6.7E-80 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 Gene3D G3DSA:1.25.40.10 330 351 8.1E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 Gene3D G3DSA:1.25.40.10 205 293 8.1E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20835 02d6e05208ed9cc93c010d1cce441028 685 Gene3D G3DSA:1.25.40.10 528 626 8.1E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11700 8ed104cef8902f939523345000b40e53 113 PANTHER PTHR34389 1 111 3.0E-30 T 23-04-2016 NIAKO_RS11700 8ed104cef8902f939523345000b40e53 113 Pfam PF05336 Domain of unknown function (DUF718) 3 111 5.3E-28 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 NIAKO_RS11700 8ed104cef8902f939523345000b40e53 113 PANTHER PTHR34389:SF3 1 111 3.0E-30 T 23-04-2016 NIAKO_RS11700 8ed104cef8902f939523345000b40e53 113 SUPERFAMILY SSF54909 1 111 9.65E-26 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS15910 2c38da1bc5cccec6a3d903a0fae7ff50 341 Pfam PF11751 Protein of unknown function (DUF3308) 25 323 1.7E-51 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS15910 2c38da1bc5cccec6a3d903a0fae7ff50 341 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 14 323 7.2E-59 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474 1 210 7.1E-98 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474 300 446 7.1E-98 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474 264 282 7.1E-98 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474:SF1 1 210 7.1E-98 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474:SF1 300 446 7.1E-98 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 PANTHER PTHR30474:SF1 264 282 7.1E-98 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 401 425 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 NIAKO_RS33860 f190895933f1a7224f73810b6f4b85d2 448 Pfam PF01098 Cell cycle protein 194 443 3.8E-48 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 Gene3D G3DSA:1.25.40.10 204 360 3.3E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 Gene3D G3DSA:1.25.40.10 445 533 3.3E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 SUPERFAMILY SSF48452 16 228 6.32E-109 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 SUPERFAMILY SSF48452 257 560 6.32E-109 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 SUPERFAMILY SSF48452 593 625 6.32E-109 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 Pfam PF07980 SusD family 318 625 3.9E-55 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS13160 6bcb786f9c22fe077b23d65f040e77d0 626 Pfam PF14322 Starch-binding associating with outer membrane 20 222 5.1E-22 T 23-04-2016 NIAKO_RS18240 5eefc7cd099ee74fd008a00d7da7fc2b 547 Gene3D G3DSA:3.40.1090.10 23 365 5.3E-20 T 23-04-2016 NIAKO_RS18240 5eefc7cd099ee74fd008a00d7da7fc2b 547 SUPERFAMILY SSF52151 227 371 3.4E-14 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS18240 5eefc7cd099ee74fd008a00d7da7fc2b 547 SUPERFAMILY SSF52151 33 180 3.4E-14 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS25270 b4e7ce806c1f2044abec21b87fe025d2 153 PANTHER PTHR30373 8 147 2.3E-18 T 23-04-2016 NIAKO_RS25270 b4e7ce806c1f2044abec21b87fe025d2 153 PANTHER PTHR30373:SF3 8 147 2.3E-18 T 23-04-2016 NIAKO_RS25270 b4e7ce806c1f2044abec21b87fe025d2 153 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 10 128 8.2E-19 T 23-04-2016 IPR007621 TPM domain NIAKO_RS03945 8593a15d15dbf4c2765058c64811a21f 277 PANTHER PTHR23200 47 258 1.4E-13 T 23-04-2016 NIAKO_RS03945 8593a15d15dbf4c2765058c64811a21f 277 Gene3D G3DSA:3.60.15.10 54 261 2.0E-16 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS03945 8593a15d15dbf4c2765058c64811a21f 277 Pfam PF00753 Metallo-beta-lactamase superfamily 55 155 2.7E-5 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS03945 8593a15d15dbf4c2765058c64811a21f 277 SUPERFAMILY SSF56281 51 259 1.33E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS25120 da765c7bc7bcc7f4104b4426af5e0318 563 Gene3D G3DSA:3.30.1330.60 449 527 3.4E-12 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS25120 da765c7bc7bcc7f4104b4426af5e0318 563 Gene3D G3DSA:4.10.1080.10 362 420 8.9E-9 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS25120 da765c7bc7bcc7f4104b4426af5e0318 563 SUPERFAMILY SSF103647 361 420 4.45E-9 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 NIAKO_RS25120 da765c7bc7bcc7f4104b4426af5e0318 563 SUPERFAMILY SSF103088 452 527 3.27E-12 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS25120 da765c7bc7bcc7f4104b4426af5e0318 563 Pfam PF00691 OmpA family 455 527 5.4E-10 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS28340 8d7a7bc885437e199d1de4be2600a49c 485 Pfam PF08811 Protein of unknown function (DUF1800) 11 484 5.5E-115 T 23-04-2016 IPR014917 Protein of unknown function DUF1800 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 Pfam PF02357 Transcription termination factor nusG 5 97 1.4E-19 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 PANTHER PTHR30265:SF3 1 165 6.7E-26 T 23-04-2016 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 Gene3D G3DSA:2.30.30.30 111 163 4.4E-4 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 SUPERFAMILY SSF50104 109 166 5.01E-5 T 23-04-2016 IPR008991 Translation protein SH3-like domain NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 Gene3D G3DSA:3.30.70.940 5 99 1.9E-12 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 PANTHER PTHR30265 1 165 6.7E-26 T 23-04-2016 NIAKO_RS35000 2610665182d61067c17b948d067b3740 169 SUPERFAMILY SSF82679 5 100 5.89E-24 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 NIAKO_RS16110 a8cdec4c883833396ab75ff95d47ea77 392 PANTHER PTHR22935 48 390 4.9E-60 T 23-04-2016 NIAKO_RS16110 a8cdec4c883833396ab75ff95d47ea77 392 Pfam PF00144 Beta-lactamase 53 374 1.1E-63 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS16110 a8cdec4c883833396ab75ff95d47ea77 392 Gene3D G3DSA:3.40.710.10 43 376 4.5E-73 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS16110 a8cdec4c883833396ab75ff95d47ea77 392 SUPERFAMILY SSF56601 48 377 8.7E-73 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS30375 f68261012fde00f746ae5803f89c91ec 504 Gene3D G3DSA:1.25.40.10 208 453 5.9E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30375 f68261012fde00f746ae5803f89c91ec 504 SUPERFAMILY SSF48452 21 503 8.22E-110 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30375 f68261012fde00f746ae5803f89c91ec 504 Pfam PF14322 Starch-binding associating with outer membrane 26 227 3.8E-24 T 23-04-2016 NIAKO_RS30375 f68261012fde00f746ae5803f89c91ec 504 Pfam PF07980 SusD family 340 495 5.6E-26 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS14765 5289e738e5f9285b0fdad2146f97003a 142 Gene3D G3DSA:3.40.50.2300 2 131 2.1E-32 T 23-04-2016 NIAKO_RS14765 5289e738e5f9285b0fdad2146f97003a 142 SUPERFAMILY SSF52172 4 130 3.7E-28 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS14765 5289e738e5f9285b0fdad2146f97003a 142 Pfam PF00072 Response regulator receiver domain 8 122 1.3E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14765 5289e738e5f9285b0fdad2146f97003a 142 SMART SM00448 6 126 1.1E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS14765 5289e738e5f9285b0fdad2146f97003a 142 PANTHER PTHR26402 6 121 5.4E-29 T 23-04-2016 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 Pfam PF01120 Alpha-L-fucosidase 28 325 1.6E-64 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 PRINTS PR00741 Glycosyl hydrolase family 29 signature 311 333 2.3E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 PRINTS PR00741 Glycosyl hydrolase family 29 signature 278 299 2.3E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 PRINTS PR00741 Glycosyl hydrolase family 29 signature 108 124 2.3E-13 T 23-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 PANTHER PTHR10030:SF25 82 402 2.4E-51 T 23-04-2016 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 SUPERFAMILY SSF51445 32 327 1.26E-76 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 SMART SM00812 26 375 2.5E-66 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 PANTHER PTHR10030 82 402 2.4E-51 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS35725 b551fa5c56d6dffed361c68588508b3b 545 Gene3D G3DSA:3.20.20.80 30 327 6.2E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS11185 7703732415e6577485d20e1ca17b88a9 199 Pfam PF10938 YfdX protein 83 198 2.6E-19 T 23-04-2016 IPR021236 Uncharacterised protein family YfdX NIAKO_RS07950 93e107cae22640e631d9f6ea6ce6caa2 252 PANTHER PTHR30292:SF0 1 251 3.9E-110 T 23-04-2016 NIAKO_RS07950 93e107cae22640e631d9f6ea6ce6caa2 252 Pfam PF03746 LamB/YcsF family 4 243 3.1E-92 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NIAKO_RS07950 93e107cae22640e631d9f6ea6ce6caa2 252 PANTHER PTHR30292 1 251 3.9E-110 T 23-04-2016 NIAKO_RS07950 93e107cae22640e631d9f6ea6ce6caa2 252 SUPERFAMILY SSF88713 3 251 3.19E-89 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS09905 684ec377c02bc1e7118a4ba644e79ae5 628 SUPERFAMILY SSF54001 246 342 4.91E-11 T 23-04-2016 NIAKO_RS09905 684ec377c02bc1e7118a4ba644e79ae5 628 Pfam PF01841 Transglutaminase-like superfamily 271 341 7.6E-6 T 23-04-2016 IPR002931 Transglutaminase-like NIAKO_RS09905 684ec377c02bc1e7118a4ba644e79ae5 628 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 56 213 2.3E-22 T 23-04-2016 IPR024618 Domain of unknown function DUF3857 NIAKO_RS19955 21ecf8c32a5847bae355909e7b33b7e9 268 Pfam PF16132 Domain of unknown function (DUF4843) 92 207 1.4E-13 T 23-04-2016 IPR032299 Protein of unknown function DUF4843 NIAKO_RS07065 09cbc662d69f5542e7d45a4642b09e3c 131 Pfam PF07681 DoxX 7 89 3.0E-9 T 23-04-2016 IPR032808 DoxX family NIAKO_RS37520 799b43139c8e6cb34069c483c3eae734 87 Pfam PF01863 Protein of unknown function DUF45 4 78 6.7E-15 T 23-04-2016 IPR002725 Protein of unknown function DUF45 NIAKO_RS35840 5e09dd7803e38f8769c37b246bbbce19 135 SUPERFAMILY SSF109854 4 133 4.12E-25 T 23-04-2016 NIAKO_RS35840 5e09dd7803e38f8769c37b246bbbce19 135 Pfam PF05163 DinB family 72 134 1.5E-6 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS35840 5e09dd7803e38f8769c37b246bbbce19 135 Gene3D G3DSA:1.20.120.450 3 127 4.2E-15 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 450 1.7E-107 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 SUPERFAMILY SSF56719 6 471 6.41E-105 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 Gene3D G3DSA:3.30.1360.40 229 301 1.5E-11 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 SMART SM00434 16 451 6.5E-81 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 PANTHER PTHR10169 23 330 2.2E-127 T 23-04-2016 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 Gene3D G3DSA:3.90.199.10 312 364 5.6E-63 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 Gene3D G3DSA:3.90.199.10 36 228 5.6E-63 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NIAKO_RS04340 0483555b371a87a8acd865e908a1521b 841 PANTHER PTHR10169:SF48 23 330 2.2E-127 T 23-04-2016 NIAKO_RS01830 6be9100c7ad591b1943c256ed2c85081 369 Pfam PF11138 Protein of unknown function (DUF2911) 31 186 9.1E-47 T 23-04-2016 IPR021314 Protein of unknown function DUF2911 NIAKO_RS01830 6be9100c7ad591b1943c256ed2c85081 369 Gene3D G3DSA:1.25.40.10 215 349 1.8E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01830 6be9100c7ad591b1943c256ed2c85081 369 SUPERFAMILY SSF81901 218 348 1.41E-10 T 23-04-2016 NIAKO_RS11245 e58a0e6c7ca297c6f1a9eb05dbacb90f 138 Gene3D G3DSA:1.10.8.310 6 94 7.1E-10 T 23-04-2016 IPR027420 DNA polymerase beta, N-terminal domain NIAKO_RS11245 e58a0e6c7ca297c6f1a9eb05dbacb90f 138 SUPERFAMILY SSF47802 10 94 1.22E-8 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 SMART SM00382 344 517 13.0 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 SMART SM00382 26 229 9.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 Gene3D G3DSA:3.40.50.300 317 535 3.5E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 Gene3D G3DSA:3.40.50.300 1 271 4.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 PANTHER PTHR19211:SF38 1 535 0.0 T 23-04-2016 NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 SUPERFAMILY SSF52540 296 531 8.46E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 SUPERFAMILY SSF52540 6 235 3.04E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 PANTHER PTHR19211 1 535 0.0 T 23-04-2016 NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 Pfam PF12848 ABC transporter 224 306 2.6E-19 T 23-04-2016 IPR032781 ABC-transporter extension domain NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 Pfam PF00005 ABC transporter 336 472 9.8E-10 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS04380 94df3db9932eea6f8f92816b5c87853e 540 Pfam PF00005 ABC transporter 18 184 3.5E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NIAKO_RS13925 56c4a0eee932ad9f73e33dc4dc471b49 320 Pfam PF01758 Sodium Bile acid symporter family 38 215 3.0E-43 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS13925 56c4a0eee932ad9f73e33dc4dc471b49 320 PANTHER PTHR10361 6 300 2.6E-83 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS10820 61e1795de401c796265216f0117da830 674 Gene3D G3DSA:1.20.1080.10 344 509 3.1E-6 T 23-04-2016 IPR023271 Aquaporin-like NIAKO_RS10820 61e1795de401c796265216f0117da830 674 Pfam PF10136 Site-specific recombinase 28 665 2.8E-199 T 23-04-2016 IPR011385 Site-specific recombinase Gcr NIAKO_RS04510 b739c8139cb96960bc328dbba736b883 342 Pfam PF01713 Smr domain 279 338 1.3E-4 T 23-04-2016 IPR002625 Smr domain NIAKO_RS21950 20123a27da3018dbafa6b07c39fe3903 168 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 141 2.0E-24 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NIAKO_RS21950 20123a27da3018dbafa6b07c39fe3903 168 SUPERFAMILY SSF56300 1 161 5.99E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS21950 20123a27da3018dbafa6b07c39fe3903 168 Gene3D G3DSA:3.60.21.10 3 155 1.4E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS21950 20123a27da3018dbafa6b07c39fe3903 168 PANTHER PTHR11124 1 161 1.3E-16 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 Pfam PF02321 Outer membrane efflux protein 35 256 1.2E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 Pfam PF02321 Outer membrane efflux protein 281 467 1.6E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 Gene3D G3DSA:1.20.1600.10 27 468 9.5E-69 T 23-04-2016 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 PANTHER PTHR30026 8 469 8.3E-49 T 23-04-2016 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 SUPERFAMILY SSF56954 7 85 5.62E-75 T 23-04-2016 NIAKO_RS28595 4da5d0c5241bff30ea07ad836ddff135 469 SUPERFAMILY SSF56954 122 469 5.62E-75 T 23-04-2016 NIAKO_RS20480 22f81105d49b363c1f5fc3fc36889f96 111 Gene3D G3DSA:3.10.20.30 10 108 2.7E-16 T 23-04-2016 IPR012675 Beta-grasp domain NIAKO_RS20480 22f81105d49b363c1f5fc3fc36889f96 111 SUPERFAMILY SSF54292 10 106 1.89E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS20480 22f81105d49b363c1f5fc3fc36889f96 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 20 97 3.5E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NIAKO_RS23580 f84bdc383cab4a0e4a677a36b898eeed 347 SUPERFAMILY SSF49879 251 318 3.44E-6 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 NIAKO_RS23580 f84bdc383cab4a0e4a677a36b898eeed 347 Gene3D G3DSA:2.60.200.20 250 317 1.3E-6 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 Gene3D G3DSA:3.30.70.560 3 153 1.3E-52 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 132 4.6E-35 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 132 1.3E-44 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 PANTHER PTHR20941 1 149 1.3E-60 T 23-04-2016 NIAKO_RS04635 e85353d27af1e53b49ede92234354a56 162 SUPERFAMILY SSF55083 1 152 2.75E-50 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 2.1E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.866 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 Gene3D G3DSA:2.40.50.140 1 72 1.5E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 PANTHER PTHR33370 1 72 4.5E-42 T 23-04-2016 NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.8E-36 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NIAKO_RS21870 7b391a937a3dfa29ce1e2c7628befa48 72 SUPERFAMILY SSF50249 2 71 1.69E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS31540 f445f2fff3f4d7ca2ca47807aa11e53b 238 SUPERFAMILY SSF53098 6 223 1.14E-30 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS31540 f445f2fff3f4d7ca2ca47807aa11e53b 238 Gene3D G3DSA:3.30.420.10 6 22 7.5E-21 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS31540 f445f2fff3f4d7ca2ca47807aa11e53b 238 Gene3D G3DSA:3.30.420.10 59 222 7.5E-21 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS31540 f445f2fff3f4d7ca2ca47807aa11e53b 238 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 60 224 1.5E-19 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like NIAKO_RS01685 9ed7f6d9c28f4851e6decd9d5fe92ecc 293 PANTHER PTHR33281 4 292 5.9E-62 T 23-04-2016 NIAKO_RS01685 9ed7f6d9c28f4851e6decd9d5fe92ecc 293 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 7 287 9.1E-47 T 23-04-2016 IPR021134 Bestrophin/UPF0187 NIAKO_RS34850 9fdf70b4b704af995ed57617e38c48ab 180 Pfam PF02472 Biopolymer transport protein ExbD/TolR 22 160 6.2E-21 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NIAKO_RS24410 cc72ee4cca9b3960c41f2f476358a7d6 185 SUPERFAMILY SSF53448 30 162 9.38E-11 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS24410 cc72ee4cca9b3960c41f2f476358a7d6 185 PANTHER PTHR10859:SF74 12 150 5.2E-22 T 23-04-2016 NIAKO_RS24410 cc72ee4cca9b3960c41f2f476358a7d6 185 Gene3D G3DSA:3.90.550.10 30 140 1.4E-6 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS24410 cc72ee4cca9b3960c41f2f476358a7d6 185 Pfam PF00535 Glycosyl transferase family 2 32 173 6.3E-10 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS24410 cc72ee4cca9b3960c41f2f476358a7d6 185 PANTHER PTHR10859 12 150 5.2E-22 T 23-04-2016 NIAKO_RS25700 db722a9b0c0f435b5a2278646d699730 522 SUPERFAMILY SSF48452 18 521 6.83E-100 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25700 db722a9b0c0f435b5a2278646d699730 522 Pfam PF07980 SusD family 349 521 1.8E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS25700 db722a9b0c0f435b5a2278646d699730 522 Gene3D G3DSA:1.25.40.10 219 448 7.9E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25700 db722a9b0c0f435b5a2278646d699730 522 Pfam PF14322 Starch-binding associating with outer membrane 24 239 4.6E-28 T 23-04-2016 NIAKO_RS13485 96d8c81fe3b60ff6fa120fa33ab54577 215 Pfam PF02698 DUF218 domain 67 168 3.4E-16 T 23-04-2016 IPR003848 Domain of unknown function DUF218 NIAKO_RS13485 96d8c81fe3b60ff6fa120fa33ab54577 215 PANTHER PTHR30336:SF0 1 214 2.0E-71 T 23-04-2016 NIAKO_RS13485 96d8c81fe3b60ff6fa120fa33ab54577 215 Gene3D G3DSA:3.40.50.620 60 168 7.1E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS13485 96d8c81fe3b60ff6fa120fa33ab54577 215 PANTHER PTHR30336 1 214 2.0E-71 T 23-04-2016 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 PANTHER PTHR40606 1 109 4.1E-41 T 23-04-2016 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 Gene3D G3DSA:3.30.160.160 54 99 2.2E-15 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 Gene3D G3DSA:3.30.160.160 2 48 1.8E-16 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 SUPERFAMILY SSF160113 1 59 8.5E-17 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 Pfam PF07411 Domain of unknown function (DUF1508) 60 107 4.4E-18 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 56 4.8E-18 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 PANTHER PTHR40606:SF1 1 109 4.1E-41 T 23-04-2016 NIAKO_RS17500 75af964e31a611413c04852f332eb37d 110 SUPERFAMILY SSF160113 61 107 4.19E-14 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 PANTHER PTHR30068:SF4 2 466 7.7E-247 T 23-04-2016 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 Gene3D G3DSA:1.10.2020.10 46 136 8.8E-42 T 23-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 PANTHER PTHR30068 2 466 7.7E-247 T 23-04-2016 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 SUPERFAMILY SSF51556 2 465 2.72E-180 T 23-04-2016 IPR032466 Metal-dependent hydrolase NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 Gene3D G3DSA:3.20.20.140 4 44 1.1E-154 T 23-04-2016 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 Gene3D G3DSA:3.20.20.140 138 465 1.1E-154 T 23-04-2016 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 48.146 T 23-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 NIAKO_RS26020 90d6c39729987ad1006168bc4ded4426 466 Pfam PF02614 Glucuronate isomerase 1 464 4.0E-214 T 23-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 NIAKO_RS22700 53c17476e7b76d1e62e0c4a1e6d9ffad 1123 Gene3D G3DSA:2.60.40.10 945 1028 5.0E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS22700 53c17476e7b76d1e62e0c4a1e6d9ffad 1123 Gene3D G3DSA:3.40.390.10 210 397 1.3E-11 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS22700 53c17476e7b76d1e62e0c4a1e6d9ffad 1123 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1045 1123 4.2E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS22700 53c17476e7b76d1e62e0c4a1e6d9ffad 1123 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 206 420 7.6E-32 T 23-04-2016 NIAKO_RS22700 53c17476e7b76d1e62e0c4a1e6d9ffad 1123 SUPERFAMILY SSF55486 205 424 2.49E-17 T 23-04-2016 NIAKO_RS25750 fbde814faca045f6ae62a865dfaf6fff 568 Pfam PF07980 SusD family 309 568 2.7E-60 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS25750 fbde814faca045f6ae62a865dfaf6fff 568 SUPERFAMILY SSF48452 23 568 3.92E-118 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25750 fbde814faca045f6ae62a865dfaf6fff 568 Pfam PF14322 Starch-binding associating with outer membrane 73 228 3.5E-19 T 23-04-2016 NIAKO_RS25750 fbde814faca045f6ae62a865dfaf6fff 568 Gene3D G3DSA:1.25.40.10 208 336 1.3E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS25750 fbde814faca045f6ae62a865dfaf6fff 568 Gene3D G3DSA:1.25.40.10 404 492 1.3E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 Pfam PF13520 Amino acid permease 28 454 3.1E-55 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 PANTHER PTHR11785 2 494 3.8E-153 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 PANTHER PTHR11785 514 530 3.8E-153 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 PIRSF PIRSF006060 13 489 6.8E-92 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 PANTHER PTHR11785:SF405 2 494 3.8E-153 T 23-04-2016 NIAKO_RS01460 dabf462ec9cca5e1b902149e107f7421 564 PANTHER PTHR11785:SF405 514 530 3.8E-153 T 23-04-2016 NIAKO_RS11055 97d50cc7d9c249e3c25972196a48b16b 478 Pfam PF14322 Starch-binding associating with outer membrane 23 243 6.2E-22 T 23-04-2016 NIAKO_RS11055 97d50cc7d9c249e3c25972196a48b16b 478 Gene3D G3DSA:1.25.40.10 226 434 2.8E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11055 97d50cc7d9c249e3c25972196a48b16b 478 SUPERFAMILY SSF48452 19 473 1.52E-60 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11055 97d50cc7d9c249e3c25972196a48b16b 478 Pfam PF07980 SusD family 347 462 8.3E-11 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SUPERFAMILY SSF48403 9 149 9.53E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 381 419 0.082 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 209 239 0.058 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 242 271 170.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 32 62 1700.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 67 107 830.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 117 147 47.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SMART SM00248 348 377 0.2 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 PANTHER PTHR24198 3 146 5.9E-29 T 23-04-2016 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 PANTHER PTHR24198 346 418 5.9E-29 T 23-04-2016 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 PANTHER PTHR24198 168 272 5.9E-29 T 23-04-2016 NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 Gene3D G3DSA:1.25.40.20 36 270 1.7E-21 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 Pfam PF12796 Ankyrin repeats (3 copies) 323 418 8.5E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SUPERFAMILY SSF48403 37 63 4.27E-28 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 SUPERFAMILY SSF48403 197 418 4.27E-28 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS11035 22e93867592208284e64d39d114bfc61 437 Gene3D G3DSA:1.25.40.20 272 419 8.6E-17 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS01600 c8fdbda87c0824e6da03570a49acbfcb 226 PANTHER PTHR39200:SF1 15 224 8.5E-14 T 23-04-2016 NIAKO_RS01600 c8fdbda87c0824e6da03570a49acbfcb 226 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 22 204 1.5E-42 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS01600 c8fdbda87c0824e6da03570a49acbfcb 226 PANTHER PTHR39200 15 224 8.5E-14 T 23-04-2016 NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 Pfam PF00082 Subtilase family 146 384 9.4E-22 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 799 874 2.9E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 Gene3D G3DSA:3.40.50.200 153 392 8.3E-26 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 Gene3D G3DSA:2.60.120.380 408 522 2.3E-27 T 23-04-2016 NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 SUPERFAMILY SSF49785 410 522 3.32E-17 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS23055 a784019e94db92ba7f3261f841492067 874 SUPERFAMILY SSF52743 172 428 4.32E-35 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 SMART SM00987 51 211 2.1E-36 T 23-04-2016 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 SMART SM00986 51 211 2.1E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 222 40.692 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 SUPERFAMILY SSF52141 3 222 4.8E-95 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 1.2E-86 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 Pfam PF03167 Uracil DNA glycosylase superfamily 56 210 5.6E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 PANTHER PTHR11264 1 223 3.6E-136 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 NIAKO_RS06040 dbe2ac2df5d04b1e44f6b348dba83938 223 Gene3D G3DSA:3.40.470.10 3 223 5.2E-101 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like NIAKO_RS35820 dd5ee737b48e7ea68c8cdc84da3b77f7 538 SUPERFAMILY SSF48452 19 538 1.14E-104 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35820 dd5ee737b48e7ea68c8cdc84da3b77f7 538 Pfam PF12771 Starch-binding associating with outer membrane 376 538 1.4E-15 T 23-04-2016 NIAKO_RS35820 dd5ee737b48e7ea68c8cdc84da3b77f7 538 PANTHER PTHR35148 338 537 2.4E-61 T 23-04-2016 NIAKO_RS35820 dd5ee737b48e7ea68c8cdc84da3b77f7 538 PANTHER PTHR35148 1 308 2.4E-61 T 23-04-2016 NIAKO_RS35820 dd5ee737b48e7ea68c8cdc84da3b77f7 538 Pfam PF12741 Susd and RagB outer membrane lipoprotein 10 299 1.9E-34 T 23-04-2016 IPR024302 SusD-like NIAKO_RS00435 838e2373426d03df6cc3fbff4e87331d 131 Pfam PF04892 VanZ like family 58 128 3.7E-7 T 23-04-2016 IPR006976 VanZ-like NIAKO_RS30535 305ecdbcb793b964f8bc033f3fc7fc9f 171 Gene3D G3DSA:2.20.28.10 131 147 9.7E-5 T 23-04-2016 IPR004039 Rubredoxin-type fold NIAKO_RS30535 305ecdbcb793b964f8bc033f3fc7fc9f 171 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 19 170 5.1E-59 T 23-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 NIAKO_RS30535 305ecdbcb793b964f8bc033f3fc7fc9f 171 SUPERFAMILY SSF117916 7 106 2.88E-25 T 23-04-2016 NIAKO_RS30535 305ecdbcb793b964f8bc033f3fc7fc9f 171 Pfam PF01883 Domain of unknown function DUF59 10 77 3.7E-13 T 23-04-2016 IPR002744 Domain of unknown function DUF59 NIAKO_RS31200 2230d910148bdec58a6df3d722354697 259 Pfam PF07978 NIPSNAP 156 258 1.4E-9 T 23-04-2016 IPR012577 NIPSNAP NIAKO_RS31200 2230d910148bdec58a6df3d722354697 259 Pfam PF07978 NIPSNAP 36 116 1.7E-6 T 23-04-2016 IPR012577 NIPSNAP NIAKO_RS31200 2230d910148bdec58a6df3d722354697 259 Gene3D G3DSA:3.30.70.900 31 140 2.9E-4 T 23-04-2016 NIAKO_RS31200 2230d910148bdec58a6df3d722354697 259 SUPERFAMILY SSF54909 148 258 1.29E-12 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS31200 2230d910148bdec58a6df3d722354697 259 SUPERFAMILY SSF54909 32 139 7.24E-8 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS21925 c2a720b0b7f4ea2f91d7910753269888 316 Pfam PF13437 HlyD family secretion protein 195 297 7.8E-13 T 23-04-2016 NIAKO_RS21925 c2a720b0b7f4ea2f91d7910753269888 316 PANTHER PTHR32347 27 311 3.7E-33 T 23-04-2016 NIAKO_RS21925 c2a720b0b7f4ea2f91d7910753269888 316 Gene3D G3DSA:2.40.50.100 189 220 9.9E-8 T 23-04-2016 NIAKO_RS21925 c2a720b0b7f4ea2f91d7910753269888 316 Gene3D G3DSA:2.40.50.100 36 68 9.9E-8 T 23-04-2016 NIAKO_RS37070 8bf1072d76d0babd68142418cec17567 379 Gene3D G3DSA:2.60.120.260 152 267 2.9E-18 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37070 8bf1072d76d0babd68142418cec17567 379 Pfam PF03422 Carbohydrate binding module (family 6) 152 267 3.6E-9 T 23-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 NIAKO_RS37070 8bf1072d76d0babd68142418cec17567 379 SUPERFAMILY SSF49785 147 268 7.51E-21 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS37070 8bf1072d76d0babd68142418cec17567 379 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 301 371 1.2E-5 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 Gene3D G3DSA:1.10.760.10 54 199 1.8E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 Gene3D G3DSA:1.10.760.10 200 344 7.4E-36 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 PIRSF PIRSF000294 15 342 4.8E-66 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 SUPERFAMILY SSF46626 185 334 4.9E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 Pfam PF03150 Di-haem cytochrome c peroxidase 60 206 1.2E-41 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 PANTHER PTHR30600 55 343 7.7E-66 T 23-04-2016 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 PANTHER PTHR30600:SF5 55 343 7.7E-66 T 23-04-2016 NIAKO_RS27840 6385bae53b0ae3686efc47b91dff35b4 347 SUPERFAMILY SSF46626 42 195 9.84E-39 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS22755 95649a351a3fb4fc2e08b12c5d266c84 235 Pfam PF06197 Protein of unknown function (DUF998) 12 198 4.4E-18 T 23-04-2016 IPR009339 Protein of unknown function DUF998 NIAKO_RS00030 756553ba10f18b240124729e183fd307 62 Gene3D G3DSA:1.10.1470.10 8 60 1.6E-5 T 23-04-2016 IPR008462 CsbD-like NIAKO_RS00030 756553ba10f18b240124729e183fd307 62 SUPERFAMILY SSF69047 7 60 2.88E-6 T 23-04-2016 IPR008462 CsbD-like NIAKO_RS05515 fb1b73e8a767a12bd2cbf401b6b772b6 249 Gene3D G3DSA:3.40.630.30 1 55 2.4E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS05515 fb1b73e8a767a12bd2cbf401b6b772b6 249 Gene3D G3DSA:3.40.630.30 158 237 2.4E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS05515 fb1b73e8a767a12bd2cbf401b6b772b6 249 Pfam PF08445 FR47-like protein 182 229 1.9E-6 T 23-04-2016 IPR013653 FR47-like GO:0016747 NIAKO_RS05515 fb1b73e8a767a12bd2cbf401b6b772b6 249 SUPERFAMILY SSF55729 152 239 2.62E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS31045 1a07aafcb2c2fee74db1a5321f07c5d6 172 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 31 171 1.5E-8 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase NIAKO_RS31045 1a07aafcb2c2fee74db1a5321f07c5d6 172 SUPERFAMILY SSF55961 30 169 2.2E-13 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 Pfam PF05593 RHS Repeat 751 786 2.8E-5 T 23-04-2016 IPR031325 RHS repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 Pfam PF05593 RHS Repeat 605 641 1.8E-6 T 23-04-2016 IPR031325 RHS repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 PANTHER PTHR32305:SF6 957 1011 9.4E-52 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 PANTHER PTHR32305:SF6 181 882 9.4E-52 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 508 539 1.8E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 626 665 4.3E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 751 787 9.2E-5 T 23-04-2016 IPR006530 YD repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 584 624 4.2E-6 T 23-04-2016 IPR006530 YD repeat NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 PANTHER PTHR32305 957 1011 9.4E-52 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 PANTHER PTHR32305 181 882 9.4E-52 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 SUPERFAMILY SSF69304 343 448 4.71E-7 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 SUPERFAMILY SSF69304 533 645 4.71E-7 T 23-04-2016 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 Gene3D G3DSA:2.130.10.10 587 650 1.9E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 Gene3D G3DSA:2.130.10.10 692 792 1.9E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS12785 892d08e7ced1a8482502041aba482dca 1026 Gene3D G3DSA:2.130.10.10 368 439 1.9E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS15915 3b3bfcf0a317e9c1ccad7c742d356b18 1230 Pfam PF13585 C-terminal domain of CHU protein family 1144 1228 2.9E-18 T 23-04-2016 NIAKO_RS15915 3b3bfcf0a317e9c1ccad7c742d356b18 1230 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1145 1230 6.5E-13 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS18520 a0e7f75aa5d3a952be5fd271016e7e10 390 Gene3D G3DSA:2.115.10.20 132 320 4.8E-10 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS18520 a0e7f75aa5d3a952be5fd271016e7e10 390 Gene3D G3DSA:2.115.10.20 49 122 2.8E-5 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS18520 a0e7f75aa5d3a952be5fd271016e7e10 390 SUPERFAMILY SSF75005 42 328 6.11E-17 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain NIAKO_RS21825 e305e07f92f821498f32a587116920cf 242 SUPERFAMILY SSF82185 83 185 9.94E-5 T 23-04-2016 NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 Gene3D G3DSA:3.20.20.100 10 281 7.2E-77 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 PANTHER PTHR11732 5 280 4.1E-106 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 Pfam PF00248 Aldo/keto reductase family 19 281 4.4E-61 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 PRINTS PR00069 Aldo-keto reductase signature 114 132 6.83E-10 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 PRINTS PR00069 Aldo-keto reductase signature 145 162 6.83E-10 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 PRINTS PR00069 Aldo-keto reductase signature 215 239 6.83E-10 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 SUPERFAMILY SSF51430 9 281 3.67E-78 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS20875 e8b7e27f9dcd7b82663dbe55e6d098e9 283 PANTHER PTHR11732:SF275 5 280 4.1E-106 T 23-04-2016 NIAKO_RS18180 a7d8a6ff6427431389d2fa775f60b25e 530 SUPERFAMILY SSF48452 24 530 4.93E-97 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18180 a7d8a6ff6427431389d2fa775f60b25e 530 Pfam PF14322 Starch-binding associating with outer membrane 89 224 7.0E-15 T 23-04-2016 NIAKO_RS18180 a7d8a6ff6427431389d2fa775f60b25e 530 Pfam PF07980 SusD family 270 530 4.6E-19 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS18180 a7d8a6ff6427431389d2fa775f60b25e 530 Gene3D G3DSA:1.25.40.10 204 301 6.4E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18180 a7d8a6ff6427431389d2fa775f60b25e 530 Gene3D G3DSA:1.25.40.10 394 478 6.4E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31310 14283b8ad564fb23289135cb9e1d7529 443 SUPERFAMILY SSF69635 72 179 1.88E-15 T 23-04-2016 NIAKO_RS31310 14283b8ad564fb23289135cb9e1d7529 443 Gene3D G3DSA:3.30.1460.10 72 183 8.8E-11 T 23-04-2016 NIAKO_RS24370 5fbf8b2632e03ca112ddc9df84ebc720 353 PANTHER PTHR30273 1 352 3.6E-51 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS24370 5fbf8b2632e03ca112ddc9df84ebc720 353 PIRSF PIRSF018266 7 353 8.2E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS24370 5fbf8b2632e03ca112ddc9df84ebc720 353 Pfam PF16344 Domain of unknown function (DUF4974) 251 347 2.9E-13 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS24370 5fbf8b2632e03ca112ddc9df84ebc720 353 PANTHER PTHR30273:SF2 1 352 3.6E-51 T 23-04-2016 NIAKO_RS24370 5fbf8b2632e03ca112ddc9df84ebc720 353 Pfam PF04773 FecR protein 143 237 1.1E-22 T 23-04-2016 IPR006860 FecR protein NIAKO_RS16300 518810fffca3de02e370e342008b69e3 95 PANTHER PTHR33408:SF2 6 71 3.1E-18 T 23-04-2016 NIAKO_RS16300 518810fffca3de02e370e342008b69e3 95 PANTHER PTHR33408 6 71 3.1E-18 T 23-04-2016 NIAKO_RS17845 56257d7c05dc5d9a5077802cdb4ce02b 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 3 332 2.8E-57 T 23-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 SUPERFAMILY SSF53300 41 55 3.41E-31 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 SUPERFAMILY SSF53300 84 239 3.41E-31 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 Pfam PF00092 von Willebrand factor type A domain 89 231 9.2E-15 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 SMART SM00327 42 241 1.9E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 PANTHER PTHR10579 42 57 7.5E-17 T 23-04-2016 NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 PANTHER PTHR10579 88 236 7.5E-17 T 23-04-2016 NIAKO_RS23465 443c863c2d41fcb11caa3be2e5f7102d 330 Gene3D G3DSA:3.40.50.410 41 240 3.0E-24 T 23-04-2016 IPR002035 von Willebrand factor, type A NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 PANTHER PTHR37296 5 281 2.1E-81 T 23-04-2016 NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 Pfam PF13509 S1 domain 8 67 6.2E-23 T 23-04-2016 NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 SMART SM00316 7 67 2.4 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 SMART SM00316 72 134 22.0 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 SMART SM00316 147 209 1.5 T 23-04-2016 IPR022967 RNA-binding domain, S1 NIAKO_RS20110 2cf56f2437c8eb367cd0d370cf755440 281 PIRSF PIRSF012524 4 280 9.4E-71 T 23-04-2016 IPR014464 Conserved virulence factor B NIAKO_RS12990 3fd3071defdb7609cad0decc388fb6a5 344 Gene3D G3DSA:3.40.50.2000 159 322 3.3E-5 T 23-04-2016 NIAKO_RS12990 3fd3071defdb7609cad0decc388fb6a5 344 Pfam PF00534 Glycosyl transferases group 1 163 319 8.0E-13 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 NIAKO_RS12990 3fd3071defdb7609cad0decc388fb6a5 344 SUPERFAMILY SSF53756 3 344 1.2E-31 T 23-04-2016 NIAKO_RS20700 c3bd50c39581f31107608dd0e40d6dbd 473 SUPERFAMILY SSF51126 55 465 2.36E-13 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS37455 a1a12c88f77f84e40c2bfefba11ef246 470 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 391 469 1.1E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 Gene3D G3DSA:1.10.10.10 161 217 3.7E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 Gene3D G3DSA:3.40.50.2300 3 160 2.3E-34 T 23-04-2016 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 SMART SM00448 4 119 5.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 PANTHER PTHR26402:SF151 4 215 1.1E-51 T 23-04-2016 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 SUPERFAMILY SSF46894 151 217 1.09E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 SMART SM00421 154 211 1.2E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 PANTHER PTHR26402 4 215 1.1E-51 T 23-04-2016 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 Pfam PF00072 Response regulator receiver domain 6 119 1.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 8.9E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NIAKO_RS25075 97869db60673cf8cf9dced664bc5c0f2 218 SUPERFAMILY SSF52172 3 136 6.69E-31 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15375 981ae28d0239714e2ac70f498f8499f9 178 Pfam PF02464 Competence-damaged protein 28 174 3.3E-26 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS15375 981ae28d0239714e2ac70f498f8499f9 178 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 30 140 3.4E-21 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS15375 981ae28d0239714e2ac70f498f8499f9 178 PANTHER PTHR13939 25 123 3.1E-20 T 23-04-2016 NIAKO_RS15375 981ae28d0239714e2ac70f498f8499f9 178 SUPERFAMILY SSF142433 25 175 1.24E-28 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS15375 981ae28d0239714e2ac70f498f8499f9 178 Gene3D G3DSA:3.90.950.20 24 174 4.0E-29 T 23-04-2016 IPR008136 CinA, C-terminal NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 Pfam PF00149 Calcineurin-like phosphoesterase 39 244 2.0E-7 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 Gene3D G3DSA:3.60.21.10 39 179 1.8E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 Gene3D G3DSA:3.60.21.10 228 275 1.8E-21 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 PANTHER PTHR34990 25 286 1.6E-48 T 23-04-2016 NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 SUPERFAMILY SSF56300 220 267 2.31E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS28380 97d7371d9556e80f9fc00cb57ee8ad03 292 SUPERFAMILY SSF56300 39 168 2.31E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS20905 6c0b5f171c6226df13176a595ce80f4e 1064 Pfam PF12770 CHAT domain 763 1064 7.7E-52 T 23-04-2016 IPR024983 CHAT domain NIAKO_RS20905 6c0b5f171c6226df13176a595ce80f4e 1064 Gene3D G3DSA:1.25.40.10 148 236 1.2E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20905 6c0b5f171c6226df13176a595ce80f4e 1064 SUPERFAMILY SSF48452 147 236 1.08E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 PANTHER PTHR34990 1 248 4.0E-57 T 23-04-2016 NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 8 246 1.5E-11 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 PANTHER PTHR34990:SF2 1 248 4.0E-57 T 23-04-2016 NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 SUPERFAMILY SSF56300 8 125 1.49E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 SUPERFAMILY SSF56300 181 245 1.49E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 Gene3D G3DSA:3.60.21.10 8 123 4.1E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33950 1d0652ccd78b53f14b63ffa4ccf8b37d 276 Gene3D G3DSA:3.60.21.10 185 247 4.1E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS08765 5a732d931ef706c98a4fb2027f101a53 194 Pfam PF14024 Protein of unknown function (DUF4240) 14 137 3.0E-36 T 23-04-2016 IPR025334 Domain of unknown function (DUF4240 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 31 481 6.2E-56 T 23-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 Gene3D G3DSA:3.40.720.10 17 208 6.7E-66 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 Gene3D G3DSA:3.40.720.10 266 358 6.7E-66 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 PIRSF PIRSF031924 3 544 4.9E-134 T 23-04-2016 IPR026263 Alkaline phosphatase, prokaryotic KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 SUPERFAMILY SSF53649 19 218 5.23E-53 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS22245 b9d7579d7d7052d2e796e055656b9eab 544 SUPERFAMILY SSF53649 267 526 5.23E-53 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NIAKO_RS17835 493299cb9331facb9501fe80420bb104 916 SUPERFAMILY SSF55545 27 149 1.03E-9 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS17835 493299cb9331facb9501fe80420bb104 916 Gene3D G3DSA:3.30.379.10 18 137 2.0E-10 T 23-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like NIAKO_RS05365 0adc84b8830a60498b8ea7771e8d73b5 87 Gene3D G3DSA:1.10.260.40 5 76 6.0E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS05365 0adc84b8830a60498b8ea7771e8d73b5 87 SUPERFAMILY SSF47413 6 76 6.19E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 Pfam PF04972 BON domain 3 70 2.3E-15 T 23-04-2016 IPR007055 BON domain NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 Pfam PF04972 BON domain 151 215 1.2E-13 T 23-04-2016 IPR007055 BON domain NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 Pfam PF04972 BON domain 78 146 7.9E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 SMART SM00749 8 71 26.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 SMART SM00749 83 146 110.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 SMART SM00749 154 217 9.8E-7 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 PANTHER PTHR34606:SF2 3 218 3.9E-44 T 23-04-2016 NIAKO_RS16055 3f81f37faeb1588ea2d5887436c6dfa2 222 PANTHER PTHR34606 3 218 3.9E-44 T 23-04-2016 NIAKO_RS19835 667baf41723ade3ad21f1762b5d36c94 391 Pfam PF12704 MacB-like periplasmic core domain 17 231 3.2E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS19835 667baf41723ade3ad21f1762b5d36c94 391 PANTHER PTHR30572 125 391 2.6E-20 T 23-04-2016 NIAKO_RS19835 667baf41723ade3ad21f1762b5d36c94 391 Pfam PF02687 FtsX-like permease family 273 381 6.9E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS13390 e48bfcf21ee305ef446a085b078489ab 301 PANTHER PTHR40277 1 283 1.3E-19 T 23-04-2016 NIAKO_RS13390 e48bfcf21ee305ef446a085b078489ab 301 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 13 171 1.3E-23 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS13390 e48bfcf21ee305ef446a085b078489ab 301 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 185 275 1.8E-11 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS24415 8f5847270b9777cea302709eb2121a75 165 Pfam PF07291 Methylamine utilisation protein MauE 28 123 3.7E-8 T 23-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 NIAKO_RS18060 106bf55c7a880adf7fd0c2f4c3359c4e 158 SUPERFAMILY SSF51182 33 134 6.5E-21 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS18060 106bf55c7a880adf7fd0c2f4c3359c4e 158 PANTHER PTHR36440:SF1 54 157 8.6E-17 T 23-04-2016 NIAKO_RS18060 106bf55c7a880adf7fd0c2f4c3359c4e 158 Pfam PF07883 Cupin domain 53 115 2.1E-15 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS18060 106bf55c7a880adf7fd0c2f4c3359c4e 158 PANTHER PTHR36440 54 157 8.6E-17 T 23-04-2016 NIAKO_RS18060 106bf55c7a880adf7fd0c2f4c3359c4e 158 Gene3D G3DSA:2.60.120.10 20 135 5.7E-29 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS26070 44587734f38b62370167da0cef22ccb9 325 Gene3D G3DSA:2.160.20.10 23 322 2.1E-115 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS26070 44587734f38b62370167da0cef22ccb9 325 ProSitePatterns PS00503 Pectinesterase signature 2. 184 193 - T 23-04-2016 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS26070 44587734f38b62370167da0cef22ccb9 325 SUPERFAMILY SSF51126 22 321 2.72E-90 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS26070 44587734f38b62370167da0cef22ccb9 325 Pfam PF01095 Pectinesterase 28 318 6.5E-78 T 23-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 NIAKO_RS26070 44587734f38b62370167da0cef22ccb9 325 PANTHER PTHR31321 24 322 6.8E-122 T 23-04-2016 NIAKO_RS14555 66ee6c9224c7d62dbca3dd3b790f20f7 181 PANTHER PTHR33269:SF2 1 175 1.4E-52 T 23-04-2016 NIAKO_RS14555 66ee6c9224c7d62dbca3dd3b790f20f7 181 PANTHER PTHR33269 1 175 1.4E-52 T 23-04-2016 NIAKO_RS14555 66ee6c9224c7d62dbca3dd3b790f20f7 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1 141 1.5E-30 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 NIAKO_RS37145 72fb159ba73fc8cc79fbbb8a1423bfac 203 PANTHER PTHR30328:SF20 11 100 4.2E-22 T 23-04-2016 NIAKO_RS37145 72fb159ba73fc8cc79fbbb8a1423bfac 203 PANTHER PTHR30328 11 100 4.2E-22 T 23-04-2016 NIAKO_RS37145 72fb159ba73fc8cc79fbbb8a1423bfac 203 Gene3D G3DSA:1.10.357.10 17 195 1.1E-17 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NIAKO_RS37145 72fb159ba73fc8cc79fbbb8a1423bfac 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 66 1.5E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NIAKO_RS37145 72fb159ba73fc8cc79fbbb8a1423bfac 203 SUPERFAMILY SSF46689 12 72 5.49E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS07475 787a3c375da51aedd65228842e372d69 213 Pfam PF14127 Domain of unknown function (DUF4294) 57 205 8.8E-49 T 23-04-2016 IPR025636 Protein of unknown function DUF4294 NIAKO_RS05565 87e1f5917802297aa0512ab0265546f2 145 Gene3D G3DSA:3.40.30.10 18 140 8.2E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS05565 87e1f5917802297aa0512ab0265546f2 145 Pfam PF13899 Thioredoxin-like 18 112 8.1E-12 T 23-04-2016 NIAKO_RS05565 87e1f5917802297aa0512ab0265546f2 145 SUPERFAMILY SSF52833 18 139 1.06E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS16785 a24c2dfb1913647697877f8dedceabd8 168 Gene3D G3DSA:1.10.1740.10 7 105 3.3E-9 T 23-04-2016 NIAKO_RS16785 a24c2dfb1913647697877f8dedceabd8 168 Gene3D G3DSA:1.10.10.10 110 165 2.0E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS16785 a24c2dfb1913647697877f8dedceabd8 168 Pfam PF04542 Sigma-70 region 2 52 95 8.8E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16785 a24c2dfb1913647697877f8dedceabd8 168 SUPERFAMILY SSF88946 8 103 1.41E-5 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS16785 a24c2dfb1913647697877f8dedceabd8 168 SUPERFAMILY SSF88659 102 165 4.3E-8 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 Gene3D G3DSA:2.40.50.100 84 161 7.8E-27 T 23-04-2016 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 PANTHER PTHR23151:SF64 1 161 1.2E-46 T 23-04-2016 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 Pfam PF00364 Biotin-requiring enzyme 87 158 4.5E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 SUPERFAMILY SSF51230 84 161 3.14E-21 T 23-04-2016 IPR011053 Single hybrid motif NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 2.1E-50 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 PANTHER PTHR23151 1 161 1.2E-46 T 23-04-2016 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 7.4E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 7.4E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NIAKO_RS01530 4df99673c3268b3f1c0226fa829346e1 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 7.4E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NIAKO_RS35030 c76d1f97e582befd7dd80a66e0bb32a2 93 Gene3D G3DSA:3.40.50.300 2 88 5.6E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS00325 9c210509c1eeae3b2c334f9b5681f266 325 PANTHER PTHR32196 12 319 3.2E-119 T 23-04-2016 NIAKO_RS00325 9c210509c1eeae3b2c334f9b5681f266 325 PANTHER PTHR32196:SF21 12 319 3.2E-119 T 23-04-2016 NIAKO_RS00325 9c210509c1eeae3b2c334f9b5681f266 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 316 2.0E-46 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NIAKO_RS11735 f2c5cad68d093347efb7a11f731a8290 524 Gene3D G3DSA:1.25.40.10 200 321 4.5E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11735 f2c5cad68d093347efb7a11f731a8290 524 Gene3D G3DSA:1.25.40.10 353 445 4.5E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11735 f2c5cad68d093347efb7a11f731a8290 524 Pfam PF07980 SusD family 271 460 1.0E-28 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11735 f2c5cad68d093347efb7a11f731a8290 524 SUPERFAMILY SSF48452 19 472 7.59E-94 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11735 f2c5cad68d093347efb7a11f731a8290 524 Pfam PF14322 Starch-binding associating with outer membrane 24 220 1.9E-25 T 23-04-2016 NIAKO_RS28775 8821c16a158d9dfb16027a1be4f77636 197 Pfam PF00027 Cyclic nucleotide-binding domain 31 118 2.1E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS28775 8821c16a158d9dfb16027a1be4f77636 197 PANTHER PTHR24567 12 190 4.8E-23 T 23-04-2016 NIAKO_RS28775 8821c16a158d9dfb16027a1be4f77636 197 PANTHER PTHR24567:SF33 12 190 4.8E-23 T 23-04-2016 NIAKO_RS28775 8821c16a158d9dfb16027a1be4f77636 197 SUPERFAMILY SSF51206 10 144 3.27E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS28775 8821c16a158d9dfb16027a1be4f77636 197 Gene3D G3DSA:2.60.120.10 4 157 3.9E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 Gene3D G3DSA:3.40.50.1820 14 258 6.1E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 PANTHER PTHR10992 14 147 1.3E-16 T 23-04-2016 NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 3.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 3.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 3.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 Pfam PF00561 alpha/beta hydrolase fold 34 261 8.0E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15800 d4f42bdf457242025d6d3b0903b75efa 291 SUPERFAMILY SSF53474 13 252 1.12E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS33070 f22dd5d227a61a3fb9b23ace8a9213d9 310 PANTHER PTHR30348 36 295 4.6E-39 T 23-04-2016 NIAKO_RS33070 f22dd5d227a61a3fb9b23ace8a9213d9 310 Gene3D G3DSA:3.20.20.410 37 288 4.6E-55 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS33070 f22dd5d227a61a3fb9b23ace8a9213d9 310 SUPERFAMILY SSF117396 37 282 2.88E-53 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS33070 f22dd5d227a61a3fb9b23ace8a9213d9 310 Pfam PF01904 Protein of unknown function DUF72 56 278 1.4E-42 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS11315 537e501dabedfc56f3392d0578c8e02a 70 PANTHER PTHR11573:SF3 13 59 3.6E-15 T 23-04-2016 NIAKO_RS11315 537e501dabedfc56f3392d0578c8e02a 70 Gene3D G3DSA:3.20.70.20 13 52 2.2E-9 T 23-04-2016 NIAKO_RS11315 537e501dabedfc56f3392d0578c8e02a 70 SUPERFAMILY SSF51998 14 63 7.63E-9 T 23-04-2016 NIAKO_RS11315 537e501dabedfc56f3392d0578c8e02a 70 PANTHER PTHR11573 13 59 3.6E-15 T 23-04-2016 NIAKO_RS11315 537e501dabedfc56f3392d0578c8e02a 70 Pfam PF02867 Ribonucleotide reductase, barrel domain 14 49 5.0E-7 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NIAKO_RS09620 cff33a4a3e1e0954f4fc71875069f26f 285 Pfam PF03575 Peptidase family S51 38 239 2.0E-20 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 NIAKO_RS09620 cff33a4a3e1e0954f4fc71875069f26f 285 PANTHER PTHR36175 1 249 2.2E-51 T 23-04-2016 NIAKO_RS09620 cff33a4a3e1e0954f4fc71875069f26f 285 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 47 251 1.1E-38 T 23-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 NIAKO_RS09620 cff33a4a3e1e0954f4fc71875069f26f 285 SUPERFAMILY SSF52317 48 247 5.04E-21 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS09620 cff33a4a3e1e0954f4fc71875069f26f 285 Gene3D G3DSA:3.40.50.880 47 248 2.0E-25 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 SUPERFAMILY SSF55347 175 391 1.5E-20 T 23-04-2016 NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 Gene3D G3DSA:3.30.360.10 178 415 5.5E-27 T 23-04-2016 NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 PANTHER PTHR22604 1 425 1.2E-136 T 23-04-2016 NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 41 164 3.6E-17 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 Gene3D G3DSA:3.40.50.720 37 177 9.2E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 SUPERFAMILY SSF51735 33 196 2.58E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS00160 8bb1a0319078954c3e314d9b1d32dc33 444 PANTHER PTHR22604:SF122 1 425 1.2E-136 T 23-04-2016 NIAKO_RS06315 207c65d313a87a925769967feb1a2b56 211 PANTHER PTHR12863 10 209 5.2E-58 T 23-04-2016 NIAKO_RS06315 207c65d313a87a925769967feb1a2b56 211 PANTHER PTHR12863:SF1 10 209 5.2E-58 T 23-04-2016 NIAKO_RS06315 207c65d313a87a925769967feb1a2b56 211 Pfam PF04116 Fatty acid hydroxylase superfamily 62 200 1.9E-18 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS02860 723840cec4b7ee3b07b35fce53d44145 183 PANTHER PTHR34135 1 177 1.8E-12 T 23-04-2016 NIAKO_RS02860 723840cec4b7ee3b07b35fce53d44145 183 PANTHER PTHR34135:SF2 1 177 1.8E-12 T 23-04-2016 NIAKO_RS02860 723840cec4b7ee3b07b35fce53d44145 183 SUPERFAMILY SSF51445 1 179 1.9E-24 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS02860 723840cec4b7ee3b07b35fce53d44145 183 Gene3D G3DSA:3.20.20.80 1 178 1.8E-31 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS02860 723840cec4b7ee3b07b35fce53d44145 183 Pfam PF01183 Glycosyl hydrolases family 25 1 168 1.1E-19 T 23-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 NIAKO_RS15315 dec4fc8e8c40ce4457645e016269aace 490 SUPERFAMILY SSF51445 61 401 6.03E-21 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15315 dec4fc8e8c40ce4457645e016269aace 490 Gene3D G3DSA:3.20.20.80 60 398 1.4E-22 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 Gene3D G3DSA:3.30.830.10 24 229 6.6E-29 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 SUPERFAMILY SSF63411 242 427 6.06E-38 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 PANTHER PTHR11851 18 417 1.6E-42 T 23-04-2016 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 SUPERFAMILY SSF63411 20 222 3.33E-34 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 Gene3D G3DSA:3.30.830.10 253 423 6.2E-27 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NIAKO_RS31735 dfe0f4b8c6f77efb05cf6326842d9564 428 Pfam PF05193 Peptidase M16 inactive domain 184 362 1.8E-30 T 23-04-2016 IPR007863 Peptidase M16, C-terminal NIAKO_RS06100 52c6c61a88c364a8230a533262d5bbe4 374 PANTHER PTHR21716 1 365 2.1E-58 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS06100 52c6c61a88c364a8230a533262d5bbe4 374 Pfam PF01594 Domain of unknown function DUF20 16 334 1.2E-55 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like NIAKO_RS04445 8f7bf13a8b95566f81c2928d4305d706 119 SMART SM00905 4 115 2.0E-19 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04445 8f7bf13a8b95566f81c2928d4305d706 119 Gene3D G3DSA:3.30.1130.10 3 115 3.3E-21 T 23-04-2016 NIAKO_RS04445 8f7bf13a8b95566f81c2928d4305d706 119 TIGRFAM TIGR00526 folB_dom: FolB domain 3 115 1.9E-15 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS04445 8f7bf13a8b95566f81c2928d4305d706 119 SUPERFAMILY SSF55620 3 114 4.56E-18 T 23-04-2016 NIAKO_RS04445 8f7bf13a8b95566f81c2928d4305d706 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 6.8E-20 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 Pfam PF00083 Sugar (and other) transporter 19 216 3.7E-25 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 Pfam PF00083 Sugar (and other) transporter 220 426 8.3E-13 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 PANTHER PTHR23508 7 432 3.2E-225 T 23-04-2016 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 SUPERFAMILY SSF103473 13 422 2.22E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 Gene3D G3DSA:1.20.1250.20 16 221 7.8E-25 T 23-04-2016 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 Gene3D G3DSA:1.20.1250.20 238 424 1.1E-22 T 23-04-2016 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 PANTHER PTHR23508:SF4 7 432 3.2E-225 T 23-04-2016 NIAKO_RS15885 d079e3cee838aabc41a3e45d762327a0 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NIAKO_RS32225 32a10755397c8eae385da7ebfc1042e7 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 176 4.4E-8 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related NIAKO_RS32225 32a10755397c8eae385da7ebfc1042e7 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 177 5.8E-12 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 NIAKO_RS26365 d515a6be284db047946d701c73fced2f 319 PANTHER PTHR10992 89 281 6.9E-12 T 23-04-2016 NIAKO_RS26365 d515a6be284db047946d701c73fced2f 319 Gene3D G3DSA:3.40.50.1820 26 301 9.3E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26365 d515a6be284db047946d701c73fced2f 319 SUPERFAMILY SSF53474 11 319 2.99E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS26365 d515a6be284db047946d701c73fced2f 319 Pfam PF12146 Serine aminopeptidase, S33 83 177 2.9E-11 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 Pfam PF07690 Major Facilitator Superfamily 26 386 1.4E-18 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 Gene3D G3DSA:1.20.1250.20 21 228 2.0E-16 T 23-04-2016 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 Gene3D G3DSA:1.20.1250.20 251 420 1.2E-6 T 23-04-2016 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 SUPERFAMILY SSF103473 11 171 5.1E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 SUPERFAMILY SSF103473 202 420 5.1E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 102 420 4.6E-101 T 23-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 PANTHER PTHR23514:SF10 14 180 2.1E-154 T 23-04-2016 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 PANTHER PTHR23514:SF10 199 426 2.1E-154 T 23-04-2016 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 PANTHER PTHR23514 14 180 2.1E-154 T 23-04-2016 NIAKO_RS17880 5c8a51424b08a6ebff8b4a416b5e8335 428 PANTHER PTHR23514 199 426 2.1E-154 T 23-04-2016 NIAKO_RS07160 0ed4942ac93777f2ef4e62cd7161ceb6 454 SUPERFAMILY SSF48452 11 444 1.07E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07160 0ed4942ac93777f2ef4e62cd7161ceb6 454 Pfam PF14322 Starch-binding associating with outer membrane 76 220 2.6E-30 T 23-04-2016 NIAKO_RS07160 0ed4942ac93777f2ef4e62cd7161ceb6 454 Gene3D G3DSA:1.25.40.10 206 395 5.8E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS07160 0ed4942ac93777f2ef4e62cd7161ceb6 454 Pfam PF07980 SusD family 336 412 6.8E-9 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS12770 7981d6529af4086fed4def8df16db206 147 Pfam PF07681 DoxX 21 102 5.3E-11 T 23-04-2016 IPR032808 DoxX family NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 SUPERFAMILY SSF88713 35 58 1.31E-13 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 SUPERFAMILY SSF88713 100 195 1.31E-13 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 SUPERFAMILY SSF88713 225 322 1.31E-13 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 Gene3D G3DSA:3.20.20.370 37 62 6.7E-11 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 Gene3D G3DSA:3.20.20.370 104 194 6.7E-11 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS26250 99c64e241dca1edd7d102298b6287a0a 341 Pfam PF01522 Polysaccharide deacetylase 36 182 2.1E-9 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS13310 14b93bde7932b560618fe35d52de07be 163 Pfam PF07660 Secretin and TonB N terminus short domain 59 99 3.2E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NIAKO_RS09715 5c50e183da191e216c6dbbb9f403151d 155 SUPERFAMILY SSF109854 10 150 1.1E-16 T 23-04-2016 NIAKO_RS09715 5c50e183da191e216c6dbbb9f403151d 155 Gene3D G3DSA:1.20.120.450 24 152 5.0E-6 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 33 291 1.2E-58 T 23-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 SUPERFAMILY SSF51445 311 510 3.09E-9 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 Pfam PF10566 Glycoside hydrolase 97 311 532 1.3E-53 T 23-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 535 631 1.8E-30 T 23-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 Gene3D G3DSA:3.20.20.70 315 442 6.0E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 PANTHER PTHR35803:SF3 1 632 2.5E-214 T 23-04-2016 NIAKO_RS15275 737f2ccae45a1dbc969e97a3a810e65a 632 PANTHER PTHR35803 1 632 2.5E-214 T 23-04-2016 NIAKO_RS36650 87cf2043aaa1a272579b8d1b84267246 492 Pfam PF13585 C-terminal domain of CHU protein family 407 490 1.3E-21 T 23-04-2016 NIAKO_RS36650 87cf2043aaa1a272579b8d1b84267246 492 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 408 491 3.7E-20 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 Gene3D G3DSA:1.10.10.60 227 281 1.4E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 PANTHER PTHR11019 224 325 7.5E-27 T 23-04-2016 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 SUPERFAMILY SSF46689 281 326 5.82E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 SMART SM00342 244 327 1.8E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 Pfam PF12833 Helix-turn-helix domain 250 327 5.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 PANTHER PTHR11019:SF61 224 325 7.5E-27 T 23-04-2016 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NIAKO_RS21980 7c1f5facf701530267b664fb3075db61 334 Gene3D G3DSA:1.10.10.60 282 325 5.0E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 Pfam PF02543 Carbamoyltransferase N-terminus 3 343 4.9E-62 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 PANTHER PTHR34847 1 562 6.0E-123 T 23-04-2016 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 Gene3D G3DSA:3.30.420.40 1 72 4.8E-5 T 23-04-2016 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 Pfam PF16861 Carbamoyltransferase C-terminus 395 562 1.7E-70 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 SUPERFAMILY SSF53067 125 210 4.21E-17 T 23-04-2016 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 SUPERFAMILY SSF53067 262 346 4.21E-17 T 23-04-2016 NIAKO_RS16435 9fb44e480afcee8a9642ef9059f00d6f 563 SUPERFAMILY SSF53067 1 79 4.21E-17 T 23-04-2016 NIAKO_RS11575 a76ec5aea5c696e73a31b3367b932dbe 227 Gene3D G3DSA:3.40.50.150 136 226 1.1E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS11575 a76ec5aea5c696e73a31b3367b932dbe 227 SUPERFAMILY SSF53335 41 210 6.94E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS28680 f9ec6f290fc1b75671e2d52e67843721 100 Pfam PF12732 YtxH-like protein 34 93 4.2E-15 T 23-04-2016 IPR024623 Uncharacterised protein family YtxH NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 Pfam PF00106 short chain dehydrogenase 8 193 6.7E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PANTHER PTHR24322:SF397 153 184 9.2E-52 T 23-04-2016 NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PANTHER PTHR24322:SF397 12 137 9.2E-52 T 23-04-2016 NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PANTHER PTHR24322 153 184 9.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PANTHER PTHR24322 12 137 9.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.7E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.7E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.7E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.7E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.7E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 SUPERFAMILY SSF51735 7 248 3.56E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS10060 d4db378e4783bf5cb00ce493be23ab05 280 Gene3D G3DSA:3.40.50.720 7 244 1.9E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 Pfam PF12704 MacB-like periplasmic core domain 427 626 1.1E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 Pfam PF12704 MacB-like periplasmic core domain 20 229 1.8E-17 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 Pfam PF02687 FtsX-like permease family 666 773 2.1E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 Pfam PF02687 FtsX-like permease family 285 396 1.1E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 PANTHER PTHR30572 408 786 4.0E-73 T 23-04-2016 NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 PANTHER PTHR30572 9 351 4.0E-73 T 23-04-2016 NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 PANTHER PTHR30572:SF4 408 786 4.0E-73 T 23-04-2016 NIAKO_RS15795 49dff0c883f07fecb91464e2f83505be 786 PANTHER PTHR30572:SF4 9 351 4.0E-73 T 23-04-2016 NIAKO_RS15010 5dcb4911ac183717d9bd54900483254f 122 Pfam PF15631 NTF2 fold immunity protein 40 122 1.1E-29 T 23-04-2016 IPR028921 NTF2 fold domain NIAKO_RS08965 550edc8b0f600f78a1159ce7a59b4f04 95 Pfam PF14094 Domain of unknown function (DUF4272) 2 91 3.4E-30 T 23-04-2016 IPR025368 Protein of unknown function DUF4272 NIAKO_RS05630 02acb7a0bfdb6708d12c4414bcdf1987 266 PANTHER PTHR13696 1 261 2.5E-88 T 23-04-2016 NIAKO_RS05630 02acb7a0bfdb6708d12c4414bcdf1987 266 PANTHER PTHR13696:SF52 1 261 2.5E-88 T 23-04-2016 NIAKO_RS05630 02acb7a0bfdb6708d12c4414bcdf1987 266 Pfam PF13614 AAA domain 3 178 7.0E-67 T 23-04-2016 IPR025669 AAA domain NIAKO_RS05630 02acb7a0bfdb6708d12c4414bcdf1987 266 Gene3D G3DSA:3.40.50.300 3 257 4.7E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05630 02acb7a0bfdb6708d12c4414bcdf1987 266 SUPERFAMILY SSF52540 1 256 1.78E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 Gene3D G3DSA:3.40.50.720 182 259 4.0E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 Pfam PF02625 XdhC and CoxI family 15 81 7.2E-23 T 23-04-2016 IPR003777 XdhC- CoxI NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 PANTHER PTHR30388:SF4 173 385 2.5E-89 T 23-04-2016 NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 PANTHER PTHR30388:SF4 5 129 2.5E-89 T 23-04-2016 NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 PANTHER PTHR30388 173 385 2.5E-89 T 23-04-2016 NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 PANTHER PTHR30388 5 129 2.5E-89 T 23-04-2016 NIAKO_RS02700 bb95599b88b3dc1d74970110670c9469 385 Pfam PF13478 XdhC Rossmann domain 208 352 1.2E-39 T 23-04-2016 IPR027051 XdhC Rossmann domain NIAKO_RS01315 051345427bd099c4c3f2914588b17205 746 Pfam PF13116 Protein of unknown function 284 419 1.1E-6 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 NIAKO_RS01315 051345427bd099c4c3f2914588b17205 746 Pfam PF13502 AsmA-like C-terminal region 503 682 5.8E-13 T 23-04-2016 IPR032712 AsmA-like, C-terminal NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 Pfam PF00107 Zinc-binding dehydrogenase 150 227 2.1E-10 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 Gene3D G3DSA:3.90.180.10 1 146 1.5E-35 T 23-04-2016 IPR011032 GroES-like NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 Gene3D G3DSA:3.40.50.720 147 229 2.3E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 SUPERFAMILY SSF50129 1 138 3.96E-29 T 23-04-2016 IPR011032 GroES-like NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 SUPERFAMILY SSF51735 111 233 6.22E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 PANTHER PTHR11695:SF294 15 299 1.1E-72 T 23-04-2016 NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 SMART SM00829 10 297 5.2E-10 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 PANTHER PTHR11695 15 299 1.1E-72 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NIAKO_RS06505 e5e73ac7885cadae42b9e28e2f1d067d 300 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NIAKO_RS00355 3e148e5988b53b072491efe1bb06e44e 289 Pfam PF13229 Right handed beta helix region 102 273 3.1E-10 T 23-04-2016 NIAKO_RS00355 3e148e5988b53b072491efe1bb06e44e 289 SUPERFAMILY SSF51126 13 285 7.94E-38 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS00355 3e148e5988b53b072491efe1bb06e44e 289 Gene3D G3DSA:2.160.20.10 34 284 9.3E-46 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS15950 636dd9c793f1e8411decb2853e5f5871 316 PANTHER PTHR30273:SF2 1 316 2.5E-44 T 23-04-2016 NIAKO_RS15950 636dd9c793f1e8411decb2853e5f5871 316 PANTHER PTHR30273 1 316 2.5E-44 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS15950 636dd9c793f1e8411decb2853e5f5871 316 Pfam PF16344 Domain of unknown function (DUF4974) 215 307 5.5E-9 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS15950 636dd9c793f1e8411decb2853e5f5871 316 Pfam PF04773 FecR protein 108 202 2.2E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS15950 636dd9c793f1e8411decb2853e5f5871 316 PIRSF PIRSF018266 4 316 5.1E-48 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS14420 c68b514ea4f99167a93943b8165c7e2c 267 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 57 201 6.7E-25 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS14420 c68b514ea4f99167a93943b8165c7e2c 267 Pfam PF05050 Methyltransferase FkbM domain 59 194 1.8E-12 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NIAKO_RS14420 c68b514ea4f99167a93943b8165c7e2c 267 Gene3D G3DSA:3.40.50.150 42 226 1.8E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14420 c68b514ea4f99167a93943b8165c7e2c 267 SUPERFAMILY SSF53335 14 221 7.85E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS14115 e03133f7fa4b98e4a4650990900b37ca 2533 SMART SM00758 2191 2339 0.0031 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS14115 e03133f7fa4b98e4a4650990900b37ca 2533 Pfam PF07691 PA14 domain 2237 2337 7.0E-10 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS14115 e03133f7fa4b98e4a4650990900b37ca 2533 SUPERFAMILY SSF56988 2240 2357 1.44E-15 T 23-04-2016 NIAKO_RS14115 e03133f7fa4b98e4a4650990900b37ca 2533 Gene3D G3DSA:3.90.182.10 2237 2352 1.8E-18 T 23-04-2016 IPR011658 PA14 domain NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 Gene3D G3DSA:3.30.420.40 1 69 1.2E-4 T 23-04-2016 NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 PANTHER PTHR34847 1 576 3.9E-126 T 23-04-2016 NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 Pfam PF16861 Carbamoyltransferase C-terminus 409 576 7.2E-68 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 SUPERFAMILY SSF53067 127 212 1.12E-19 T 23-04-2016 NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 SUPERFAMILY SSF53067 1 79 1.12E-19 T 23-04-2016 NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 SUPERFAMILY SSF53067 270 360 1.12E-19 T 23-04-2016 NIAKO_RS33385 2fbad19c7ebec22f9362a975c2ec3142 580 Pfam PF02543 Carbamoyltransferase N-terminus 3 355 6.0E-66 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 NIAKO_RS07305 d63a99499ce5376d99446777d9e2bf74 381 PANTHER PTHR30547 148 380 9.7E-140 T 23-04-2016 NIAKO_RS07305 d63a99499ce5376d99446777d9e2bf74 381 PANTHER PTHR30547 9 114 9.7E-140 T 23-04-2016 NIAKO_RS07305 d63a99499ce5376d99446777d9e2bf74 381 Pfam PF06250 Protein of unknown function (DUF1016) 25 365 2.9E-113 T 23-04-2016 IPR009362 Protein of unknown function DUF1016 NIAKO_RS07305 d63a99499ce5376d99446777d9e2bf74 381 PANTHER PTHR30547:SF0 148 380 9.7E-140 T 23-04-2016 NIAKO_RS07305 d63a99499ce5376d99446777d9e2bf74 381 PANTHER PTHR30547:SF0 9 114 9.7E-140 T 23-04-2016 NIAKO_RS26295 a77d21e6bfd945de688db641f9f96b24 297 PANTHER PTHR22916 10 257 4.6E-19 T 23-04-2016 NIAKO_RS26295 a77d21e6bfd945de688db641f9f96b24 297 SUPERFAMILY SSF53448 9 261 2.74E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26295 a77d21e6bfd945de688db641f9f96b24 297 Gene3D G3DSA:3.90.550.10 10 236 2.8E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS26295 a77d21e6bfd945de688db641f9f96b24 297 Pfam PF00535 Glycosyl transferase family 2 9 136 7.2E-14 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 SUPERFAMILY SSF117892 46 179 2.22E-37 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 148 166 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 124 147 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 192 215 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 69 90 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 22 44 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 167 188 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PRINTS PR00721 Stomatin signature 104 121 1.7E-55 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PANTHER PTHR10264:SF60 1 236 2.5E-87 T 23-04-2016 NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 SMART SM00244 15 172 3.2E-49 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 Pfam PF01145 SPFH domain / Band 7 family 19 188 2.2E-33 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS10005 f5199f4cbb957dce22b9d6a520f21618 254 PANTHER PTHR10264 1 236 2.5E-87 T 23-04-2016 IPR001972 Stomatin family GO:0016020 NIAKO_RS01950 d21fead786661845ca5e0cb7aefb8fd9 328 SUPERFAMILY SSF56059 133 286 1.26E-16 T 23-04-2016 NIAKO_RS01950 d21fead786661845ca5e0cb7aefb8fd9 328 Gene3D G3DSA:3.30.470.20 92 269 2.7E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NIAKO_RS08975 0eda99cc8a0734062e0ca4eea71dbf14 134 PANTHER PTHR26402 5 127 5.5E-23 T 23-04-2016 NIAKO_RS08975 0eda99cc8a0734062e0ca4eea71dbf14 134 SUPERFAMILY SSF52172 5 126 4.13E-24 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS08975 0eda99cc8a0734062e0ca4eea71dbf14 134 SMART SM00448 5 123 1.0E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS08975 0eda99cc8a0734062e0ca4eea71dbf14 134 Gene3D G3DSA:3.40.50.2300 5 126 7.8E-24 T 23-04-2016 NIAKO_RS08975 0eda99cc8a0734062e0ca4eea71dbf14 134 Pfam PF00072 Response regulator receiver domain 7 123 1.4E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS17560 e73de4d6fe22d0235c4aacd276736a24 209 Pfam PF00156 Phosphoribosyl transferase domain 16 193 2.1E-21 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS17560 e73de4d6fe22d0235c4aacd276736a24 209 Gene3D G3DSA:3.40.50.2020 7 202 1.9E-28 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS17560 e73de4d6fe22d0235c4aacd276736a24 209 PANTHER PTHR31299 6 205 5.3E-53 T 23-04-2016 NIAKO_RS17560 e73de4d6fe22d0235c4aacd276736a24 209 SUPERFAMILY SSF53271 6 205 3.54E-38 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS12100 3c9925f3b243b408888aea1a0583ba4a 409 Gene3D G3DSA:3.40.50.1820 116 252 1.0E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12100 3c9925f3b243b408888aea1a0583ba4a 409 SUPERFAMILY SSF53474 125 276 4.23E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS20225 b2fc97c6b369860de56e89ed1971b8e8 863 Pfam PF13585 C-terminal domain of CHU protein family 775 850 3.0E-14 T 23-04-2016 NIAKO_RS20225 b2fc97c6b369860de56e89ed1971b8e8 863 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 777 863 8.6E-14 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS28880 0394673a837025e0f3bd3e8e4c3b45ba 89 Gene3D G3DSA:2.60.120.620 1 58 5.3E-5 T 23-04-2016 NIAKO_RS28880 0394673a837025e0f3bd3e8e4c3b45ba 89 SUPERFAMILY SSF51197 1 75 4.26E-8 T 23-04-2016 NIAKO_RS31780 401395844a4764abe5d7ce97ff7f90c3 62 Gene3D G3DSA:1.10.1470.10 1 60 3.3E-18 T 23-04-2016 IPR008462 CsbD-like NIAKO_RS31780 401395844a4764abe5d7ce97ff7f90c3 62 Pfam PF05532 CsbD-like 5 53 3.0E-15 T 23-04-2016 IPR008462 CsbD-like NIAKO_RS31780 401395844a4764abe5d7ce97ff7f90c3 62 SUPERFAMILY SSF69047 1 59 5.89E-16 T 23-04-2016 IPR008462 CsbD-like NIAKO_RS37435 12e8e593219030ab9bd2666a20ce3c49 201 Pfam PF04255 Protein of unknown function (DUF433) 96 151 7.1E-11 T 23-04-2016 IPR007367 Protein of unknown function DUF433 NIAKO_RS37435 12e8e593219030ab9bd2666a20ce3c49 201 SUPERFAMILY SSF46689 80 152 3.05E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS37435 12e8e593219030ab9bd2666a20ce3c49 201 Gene3D G3DSA:1.10.10.10 96 152 7.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37040 f6182983b8a7dc481a800ed0d6e4b0b3 187 Pfam PF04191 Phospholipid methyltransferase 74 173 1.0E-9 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 NIAKO_RS09305 a8c67a75188918fe87439242098b04be 143 Gene3D G3DSA:2.60.40.790 32 132 3.8E-14 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS09305 a8c67a75188918fe87439242098b04be 143 Pfam PF00011 Hsp20/alpha crystallin family 42 140 1.8E-9 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS09305 a8c67a75188918fe87439242098b04be 143 SUPERFAMILY SSF49764 33 132 4.88E-18 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS13580 a3bc557e26d36f319c728e53bf7f7931 225 Gene3D G3DSA:1.25.40.10 59 217 9.7E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13580 a3bc557e26d36f319c728e53bf7f7931 225 SUPERFAMILY SSF48452 60 217 1.07E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22745 65ead88b1a59ed22d22421050b136817 229 Pfam PF12099 Protein of unknown function (DUF3575) 28 175 2.1E-7 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 Gene3D G3DSA:3.40.1190.20 2 334 2.9E-60 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 Pfam PF00294 pfkB family carbohydrate kinase 1 314 8.9E-32 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 PANTHER PTHR10584:SF203 1 213 3.9E-59 T 23-04-2016 NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 PANTHER PTHR10584:SF203 229 333 3.9E-59 T 23-04-2016 NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 PANTHER PTHR10584 1 213 3.9E-59 T 23-04-2016 NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 PANTHER PTHR10584 229 333 3.9E-59 T 23-04-2016 NIAKO_RS26015 fd0b7d3cb3f1c05db934b6be0f7b802d 336 SUPERFAMILY SSF53613 1 332 2.03E-58 T 23-04-2016 IPR029056 Ribokinase-like NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 Pfam PF02687 FtsX-like permease family 291 403 1.1E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 Pfam PF02687 FtsX-like permease family 673 782 4.0E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 PANTHER PTHR30572 402 793 3.7E-67 T 23-04-2016 NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 PANTHER PTHR30572 291 357 3.7E-67 T 23-04-2016 NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 Pfam PF12704 MacB-like periplasmic core domain 20 247 1.9E-14 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 Pfam PF12704 MacB-like periplasmic core domain 434 636 2.8E-8 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 PANTHER PTHR30572:SF4 402 793 3.7E-67 T 23-04-2016 NIAKO_RS15465 f969dcdf436c2a01689b3c6978461b86 793 PANTHER PTHR30572:SF4 291 357 3.7E-67 T 23-04-2016 NIAKO_RS07855 d39a2bf754615d91cea64e227dfa4776 275 Pfam PF16138 Domain of unknown function (4846) 60 151 9.5E-29 T 23-04-2016 IPR032315 Protein of unknown function DUF4846 NIAKO_RS07855 d39a2bf754615d91cea64e227dfa4776 275 Pfam PF16138 Domain of unknown function (4846) 163 274 3.1E-41 T 23-04-2016 IPR032315 Protein of unknown function DUF4846 NIAKO_RS30900 96ab101cdbe70c345f3719e12fa3ec03 236 PANTHER PTHR14969 25 224 1.4E-28 T 23-04-2016 NIAKO_RS30900 96ab101cdbe70c345f3719e12fa3ec03 236 Gene3D G3DSA:1.20.144.10 55 222 8.1E-28 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS30900 96ab101cdbe70c345f3719e12fa3ec03 236 SUPERFAMILY SSF48317 25 224 7.85E-35 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS30900 96ab101cdbe70c345f3719e12fa3ec03 236 Pfam PF01569 PAP2 superfamily 110 222 1.5E-15 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS30900 96ab101cdbe70c345f3719e12fa3ec03 236 SMART SM00014 106 218 1.6E-16 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS21095 f3f46dc5667df9f44d03fec74afcc179 388 PANTHER PTHR16254 13 388 5.7E-48 T 23-04-2016 NIAKO_RS21095 f3f46dc5667df9f44d03fec74afcc179 388 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 1.4E-49 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.170.130.10 115 239 1.9E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532 7 389 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532 412 454 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532 554 583 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532 614 886 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532 904 1115 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532:SF57 7 389 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532:SF57 412 454 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532:SF57 554 583 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532:SF57 614 886 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 PANTHER PTHR11532:SF57 904 1115 6.4E-183 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1117 1.6E-209 T 23-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF49464 30 119 7.72E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 449 501 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 108 266 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 535 701 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 729 834 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 322 391 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 SUPERFAMILY SSF56935 966 1117 2.88E-56 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Pfam PF13715 CarboxypepD_reg-like domain 30 110 5.8E-13 T 23-04-2016 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.40.170.20 956 981 2.3E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.40.170.20 434 842 2.3E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.40.170.20 322 386 2.3E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.40.170.20 240 262 2.3E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.40.170.20 1021 1117 2.3E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 238 2.0E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS17770 c9afaa4cd8f7f083ee21cbb8ce9c10b4 1117 Gene3D G3DSA:2.60.40.1120 30 114 3.9E-13 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS08460 95176030d7a38087662c44f1b8e28956 255 Pfam PF01904 Protein of unknown function DUF72 26 247 9.1E-59 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS08460 95176030d7a38087662c44f1b8e28956 255 PANTHER PTHR30348 12 252 1.6E-53 T 23-04-2016 NIAKO_RS08460 95176030d7a38087662c44f1b8e28956 255 Gene3D G3DSA:3.20.20.410 10 250 7.3E-63 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS08460 95176030d7a38087662c44f1b8e28956 255 SUPERFAMILY SSF117396 11 249 8.5E-62 T 23-04-2016 IPR002763 Protein of unknown function DUF72 NIAKO_RS09220 61ddc65544d4db0f220296562c4def96 329 Pfam PF02470 MlaD protein 42 115 8.2E-15 T 23-04-2016 IPR003399 Mce/MlaD NIAKO_RS09220 61ddc65544d4db0f220296562c4def96 329 PANTHER PTHR33371 1 265 1.2E-23 T 23-04-2016 NIAKO_RS11975 39c6f17da2c0d74cf88132cf279335d6 645 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 593 645 1.3E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS03505 9e72066f3fef1f9add6cdbfb38112516 226 SUPERFAMILY SSF52266 37 226 1.37E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03505 9e72066f3fef1f9add6cdbfb38112516 226 Gene3D G3DSA:3.40.50.1110 45 226 4.1E-50 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03505 9e72066f3fef1f9add6cdbfb38112516 226 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 56 217 5.2E-31 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03505 9e72066f3fef1f9add6cdbfb38112516 226 PANTHER PTHR30383 54 226 8.0E-22 T 23-04-2016 NIAKO_RS13665 7a8ab97e655d9a69a1326afc5f2f6b9b 123 Pfam PF09685 Domain of unknown function (DUF4870) 25 122 1.0E-28 T 23-04-2016 IPR019109 Protein of unknown function DUF4870 NIAKO_RS06000 897051a7170e0f37e5de57218a14ef76 152 SUPERFAMILY SSF56925 37 149 3.14E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS36380 558da0eea220b9fff867b3b64c2ca592 195 Pfam PF13568 Outer membrane protein beta-barrel domain 18 172 2.6E-23 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Gene3D G3DSA:2.40.170.20 628 831 1.5E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Gene3D G3DSA:2.40.170.20 865 932 1.5E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Gene3D G3DSA:2.40.170.20 292 552 1.5E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Gene3D G3DSA:2.40.170.20 234 259 1.5E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Gene3D G3DSA:2.60.40.1120 33 127 6.2E-8 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 SUPERFAMILY SSF56935 148 289 5.49E-21 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 SUPERFAMILY SSF56935 580 824 5.49E-21 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 SUPERFAMILY SSF56935 335 514 5.49E-21 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 SUPERFAMILY SSF56935 865 932 5.49E-21 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 SUPERFAMILY SSF49452 27 110 1.86E-7 T 23-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Pfam PF14905 Outer membrane protein beta-barrel family 470 930 7.6E-33 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069:SF12 294 380 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069:SF12 1 259 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069:SF12 433 714 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069 294 380 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069 1 259 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 PANTHER PTHR30069 433 714 5.7E-17 T 23-04-2016 NIAKO_RS10400 9a02b18e4947a8b8ba0756787f331c74 941 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 109 1.8E-9 T 23-04-2016 NIAKO_RS34180 e6ce58a07b874605d3cf55e373076277 236 SUPERFAMILY SSF51261 65 196 7.32E-20 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS34180 e6ce58a07b874605d3cf55e373076277 236 Gene3D G3DSA:2.70.70.10 88 196 1.3E-19 T 23-04-2016 NIAKO_RS34180 e6ce58a07b874605d3cf55e373076277 236 Pfam PF01551 Peptidase family M23 98 195 1.1E-16 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS03620 84408801df6b4e0f249161882546350f 144 Pfam PF14534 Domain of unknown function (DUF4440) 28 134 2.7E-16 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 NIAKO_RS03620 84408801df6b4e0f249161882546350f 144 SUPERFAMILY SSF54427 24 139 1.39E-26 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS03620 84408801df6b4e0f249161882546350f 144 Gene3D G3DSA:3.10.450.50 24 142 3.5E-32 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS14775 d988728b02224e8c1a3a7a1f3720ff33 243 Pfam PF13367 Protease prsW family 28 198 6.2E-36 T 23-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS14775 d988728b02224e8c1a3a7a1f3720ff33 243 PANTHER PTHR36844 1 228 1.4E-33 T 23-04-2016 NIAKO_RS14775 d988728b02224e8c1a3a7a1f3720ff33 243 PIRSF PIRSF016933 1 240 2.7E-54 T 23-04-2016 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 Gene3D G3DSA:1.10.8.300 213 328 2.4E-38 T 23-04-2016 NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 Gene3D G3DSA:3.40.50.300 33 198 1.0E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 PIRSF PIRSF002849 3 333 1.1E-130 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 SUPERFAMILY SSF52540 20 311 2.03E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 52 182 1.7E-66 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 PANTHER PTHR11603:SF148 4 333 2.2E-138 T 23-04-2016 NIAKO_RS27955 52d86709d5ced448e5cb2910c2001efa 333 PANTHER PTHR11603 4 333 2.2E-138 T 23-04-2016 NIAKO_RS14630 1e6bb032a3ab2aea12846560d0d0b7f8 327 Gene3D G3DSA:1.10.3820.10 179 268 9.5E-4 T 23-04-2016 NIAKO_RS14630 1e6bb032a3ab2aea12846560d0d0b7f8 327 SUPERFAMILY SSF48695 178 192 6.16E-5 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS14630 1e6bb032a3ab2aea12846560d0d0b7f8 327 SUPERFAMILY SSF48695 231 276 6.16E-5 T 23-04-2016 IPR011031 Multihaem cytochrome NIAKO_RS17920 01f76621c59d5fc7044e4df4c6caf80d 628 SUPERFAMILY SSF69318 126 393 3.4E-15 T 23-04-2016 NIAKO_RS17920 01f76621c59d5fc7044e4df4c6caf80d 628 PANTHER PTHR32438 12 614 9.5E-158 T 23-04-2016 NIAKO_RS17920 01f76621c59d5fc7044e4df4c6caf80d 628 PANTHER PTHR32438:SF6 12 614 9.5E-158 T 23-04-2016 NIAKO_RS29065 c827ebae7139f6106be0ea41a951f990 233 Gene3D G3DSA:1.10.1200.10 195 233 9.4E-5 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS29065 c827ebae7139f6106be0ea41a951f990 233 Gene3D G3DSA:1.10.1200.10 3 42 3.9E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS37320 c02b0a429c67b86ed1e1b5a20ab61e54 169 Gene3D G3DSA:1.10.10.10 107 166 5.8E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37320 c02b0a429c67b86ed1e1b5a20ab61e54 169 SUPERFAMILY SSF88659 101 166 5.42E-9 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS37320 c02b0a429c67b86ed1e1b5a20ab61e54 169 Gene3D G3DSA:1.10.1740.10 7 105 9.6E-7 T 23-04-2016 NIAKO_RS04000 4e464e2d88ca1a49dfaac215c43cc1b7 373 Pfam PF14292 SusE outer membrane protein 13 131 4.6E-24 T 23-04-2016 IPR025970 SusE outer membrane protein UniPathway: UPA00153 NIAKO_RS09115 7e57289662ce60204496cfa015514eb3 185 PANTHER PTHR37692 4 185 2.8E-45 T 23-04-2016 NIAKO_RS09115 7e57289662ce60204496cfa015514eb3 185 Pfam PF04238 Protein of unknown function (DUF420) 52 180 1.4E-42 T 23-04-2016 IPR007352 Protein of unknown function DUF420 NIAKO_RS32820 273b1974d8b50949cb56bc09217f072e 176 Pfam PF11667 Putative zincin peptidase 13 127 5.4E-26 T 23-04-2016 IPR021683 Putative zincin peptidase NIAKO_RS16020 0d0f3d529d257050aedc342cb1b716c4 514 SUPERFAMILY SSF143631 42 340 1.92E-64 T 23-04-2016 IPR003374 ApbE-like domain NIAKO_RS16020 0d0f3d529d257050aedc342cb1b716c4 514 PANTHER PTHR30040:SF2 40 349 7.4E-59 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS16020 0d0f3d529d257050aedc342cb1b716c4 514 Pfam PF02424 ApbE family 49 324 1.3E-54 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS16020 0d0f3d529d257050aedc342cb1b716c4 514 Pfam PF10029 Predicted periplasmic protein (DUF2271) 370 505 1.3E-36 T 23-04-2016 IPR014469 Protein of unknown function DUF2271 NIAKO_RS16020 0d0f3d529d257050aedc342cb1b716c4 514 PANTHER PTHR30040 40 349 7.4E-59 T 23-04-2016 NIAKO_RS23860 be60839bfa05fbe8fcccd30e3686d8c7 130 Pfam PF14087 Domain of unknown function (DUF4267) 14 118 1.3E-19 T 23-04-2016 IPR025363 Protein of unknown function DUF4267 NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 SUPERFAMILY SSF81296 52 132 1.65E-5 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 SUPERFAMILY SSF81296 216 293 1.71E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Pfam PF01833 IPT/TIG domain 52 131 1.7E-4 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Pfam PF01833 IPT/TIG domain 137 213 8.9E-7 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Pfam PF01833 IPT/TIG domain 218 289 4.1E-7 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 SUPERFAMILY SSF81296 305 394 2.2E-6 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Gene3D G3DSA:2.60.40.10 52 131 1.8E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Gene3D G3DSA:2.60.40.10 137 210 3.4E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Gene3D G3DSA:2.60.40.10 305 383 3.6E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 Gene3D G3DSA:2.60.40.10 216 293 3.0E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS19090 1211ecb1a144f77557abc1727e96459d 397 SUPERFAMILY SSF81296 135 213 3.22E-9 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS13610 0a5a9cf696bc9927a6a707f4b02d27e6 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 418 575 1.0E-30 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain NIAKO_RS13610 0a5a9cf696bc9927a6a707f4b02d27e6 604 PANTHER PTHR34384:SF5 12 603 1.1E-197 T 23-04-2016 NIAKO_RS13610 0a5a9cf696bc9927a6a707f4b02d27e6 604 PANTHER PTHR34384 12 603 1.1E-197 T 23-04-2016 NIAKO_RS13610 0a5a9cf696bc9927a6a707f4b02d27e6 604 Pfam PF04183 IucA / IucC family 147 395 1.9E-73 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 PANTHER PTHR36924:SF2 3 87 9.1E-28 T 23-04-2016 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 7.2E-32 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 SUPERFAMILY SSF47413 10 87 5.2E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 Gene3D G3DSA:1.10.260.40 3 87 6.2E-33 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 PANTHER PTHR36924 3 87 9.1E-28 T 23-04-2016 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 SMART SM00530 14 70 7.3E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS16665 6a67d7d30d7b9d3a8111891bf037b80c 90 Pfam PF01381 Helix-turn-helix 19 69 4.1E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS07435 819dbe10f06523992611c82897f8dcca 204 Pfam PF12867 DinB superfamily 29 163 4.6E-18 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS07435 819dbe10f06523992611c82897f8dcca 204 SUPERFAMILY SSF109854 14 166 6.56E-29 T 23-04-2016 NIAKO_RS07435 819dbe10f06523992611c82897f8dcca 204 Gene3D G3DSA:1.20.120.450 12 169 2.6E-40 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS33625 b46f53a757095ec10a1b4986e00334f5 177 SUPERFAMILY SSF111069 91 176 3.14E-13 T 23-04-2016 IPR015068 Protein of unknown function DUF1877 NIAKO_RS33625 b46f53a757095ec10a1b4986e00334f5 177 Pfam PF08974 Domain of unknown function (DUF1877) 1 173 3.3E-17 T 23-04-2016 IPR015068 Protein of unknown function DUF1877 NIAKO_RS33625 b46f53a757095ec10a1b4986e00334f5 177 Gene3D G3DSA:3.40.1760.10 92 176 2.3E-15 T 23-04-2016 IPR015068 Protein of unknown function DUF1877 NIAKO_RS34945 0b7647f64a84362411d2f1c87819b7af 339 SUPERFAMILY SSF53756 1 278 5.76E-8 T 23-04-2016 NIAKO_RS34945 0b7647f64a84362411d2f1c87819b7af 339 PANTHER PTHR39662:SF1 2 337 2.1E-34 T 23-04-2016 NIAKO_RS34945 0b7647f64a84362411d2f1c87819b7af 339 Pfam PF04007 Protein of unknown function (DUF354) 2 333 7.0E-10 T 23-04-2016 IPR007152 Protein of unknown function DUF354 NIAKO_RS34945 0b7647f64a84362411d2f1c87819b7af 339 Gene3D G3DSA:3.40.50.2000 19 134 3.0E-4 T 23-04-2016 NIAKO_RS34945 0b7647f64a84362411d2f1c87819b7af 339 PANTHER PTHR39662 2 337 2.1E-34 T 23-04-2016 NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 PANTHER PTHR12737:SF21 1 303 4.9E-92 T 23-04-2016 NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 SUPERFAMILY SSF55909 4 297 2.4E-45 T 23-04-2016 NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 PIRSF PIRSF028188 1 303 3.6E-112 T 23-04-2016 IPR014541 Predicted amidinotransferase, FN0238 type NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 Pfam PF02274 Amidinotransferase 9 300 8.6E-83 T 23-04-2016 NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 Gene3D G3DSA:3.75.10.10 6 296 3.7E-28 T 23-04-2016 NIAKO_RS04835 f6757be42363117a0e638765c23d4b4c 303 PANTHER PTHR12737 1 303 4.9E-92 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 NIAKO_RS24495 2de71b1aa4b7de3ad73af287e405dd99 471 SUPERFAMILY SSF51126 31 385 5.31E-60 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS24495 2de71b1aa4b7de3ad73af287e405dd99 471 Pfam PF14592 Chondroitinase B 31 328 1.3E-37 T 23-04-2016 NIAKO_RS24495 2de71b1aa4b7de3ad73af287e405dd99 471 Gene3D G3DSA:2.160.20.10 29 469 6.7E-77 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS27910 393151549253bce65272a7d34d5b62ed 835 SUPERFAMILY SSF49464 25 85 2.35E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS27910 393151549253bce65272a7d34d5b62ed 835 Pfam PF13715 CarboxypepD_reg-like domain 25 106 4.5E-9 T 23-04-2016 NIAKO_RS36785 bbb518366a946b86b9bf7da1758faef0 347 SUPERFAMILY SSF53448 70 291 1.35E-55 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS36785 bbb518366a946b86b9bf7da1758faef0 347 Pfam PF00535 Glycosyl transferase family 2 76 229 4.7E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS36785 bbb518366a946b86b9bf7da1758faef0 347 Gene3D G3DSA:3.90.550.10 74 283 1.9E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS36785 bbb518366a946b86b9bf7da1758faef0 347 PANTHER PTHR22916 20 328 9.7E-55 T 23-04-2016 NIAKO_RS29125 0a920e2305cb101c59070b555738150f 336 SUPERFAMILY SSF63712 39 182 7.06E-9 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS29125 0a920e2305cb101c59070b555738150f 336 Gene3D G3DSA:2.70.170.10 94 210 2.2E-9 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS29125 0a920e2305cb101c59070b555738150f 336 Gene3D G3DSA:2.70.170.10 38 81 7.1E-4 T 23-04-2016 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006810|GO:0016020 NIAKO_RS29125 0a920e2305cb101c59070b555738150f 336 Gene3D G3DSA:1.20.58.390 216 328 2.2E-8 T 23-04-2016 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 SMART SM00947 30 194 1.3E-64 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 PANTHER PTHR11002 2 191 8.6E-103 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 SUPERFAMILY SSF53056 2 193 1.31E-70 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 Gene3D G3DSA:3.40.1050.10 2 191 5.1E-76 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 PANTHER PTHR11002:SF16 2 191 8.6E-103 T 23-04-2016 NIAKO_RS32750 fef8a5b85e725b14c6694001a97ec488 211 Pfam PF00484 Carbonic anhydrase 38 188 1.4E-55 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NIAKO_RS06780 ad8f643e07aee57087624eb60ae3e91e 508 PANTHER PTHR14463 1 506 1.7E-157 T 23-04-2016 NIAKO_RS06780 ad8f643e07aee57087624eb60ae3e91e 508 Pfam PF06762 Lipase maturation factor 315 491 6.0E-60 T 23-04-2016 IPR009613 Lipase maturation factor NIAKO_RS06780 ad8f643e07aee57087624eb60ae3e91e 508 Pfam PF06762 Lipase maturation factor 129 306 4.1E-58 T 23-04-2016 IPR009613 Lipase maturation factor NIAKO_RS30585 21905cd676076ef8ae5e49e0c5d1bc4e 200 Pfam PF11827 Protein of unknown function (DUF3347) 15 196 9.7E-54 T 23-04-2016 IPR021782 Protein of unknown function DUF3347 NIAKO_RS31290 2605a51305b63aab853582ff1e7c8ab4 311 PANTHER PTHR34595 1 305 1.8E-71 T 23-04-2016 NIAKO_RS31290 2605a51305b63aab853582ff1e7c8ab4 311 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 9.0E-77 T 23-04-2016 IPR007296 Domain of unknown function DUF403 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 Gene3D G3DSA:1.10.1200.80 255 322 1.8E-16 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 Pfam PF01207 Dihydrouridine synthase (Dus) 16 318 3.1E-82 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 321 1.3E-98 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 PANTHER PTHR11082 2 325 3.7E-120 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 PANTHER PTHR11082:SF25 2 325 3.7E-120 T 23-04-2016 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 PIRSF PIRSF006621 1 329 4.2E-93 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 SUPERFAMILY SSF51395 13 320 6.04E-79 T 23-04-2016 NIAKO_RS05455 667ea978e66e9d6e91c7c051915fcfe0 345 Gene3D G3DSA:3.20.20.70 13 249 1.1E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS01860 2935d895effd651f4d6f398562c005a3 205 Pfam PF10263 SprT-like family 35 106 2.6E-7 T 23-04-2016 IPR006640 SprT-like NIAKO_RS02610 66ca7f3afced080026cb4f7ff4d604e5 611 Gene3D G3DSA:2.60.120.10 257 496 4.9E-45 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS02610 66ca7f3afced080026cb4f7ff4d604e5 611 SUPERFAMILY SSF51182 521 593 3.18E-62 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS02610 66ca7f3afced080026cb4f7ff4d604e5 611 SUPERFAMILY SSF51182 257 494 3.18E-62 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS32395 d1d9a2c02b761e2250032dbc263d93a3 240 Pfam PF14123 Domain of unknown function (DUF4290) 1 171 8.0E-67 T 23-04-2016 IPR025632 Protein of unknown function DUF4290 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 PANTHER PTHR11019:SF50 99 181 1.8E-16 T 23-04-2016 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 Pfam PF12833 Helix-turn-helix domain 98 174 3.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 PANTHER PTHR11019 99 181 1.8E-16 T 23-04-2016 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 SUPERFAMILY SSF46689 127 174 3.48E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 SMART SM00342 101 173 7.4E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 Gene3D G3DSA:3.30.70.100 2 61 4.0E-4 T 23-04-2016 NIAKO_RS11030 f3a0ba95b75bf6273af97bbc050cb22d 186 Gene3D G3DSA:1.10.10.60 125 174 5.9E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS05850 c73cc047df91583f43341425d04f0585 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 9.2E-14 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NIAKO_RS05850 c73cc047df91583f43341425d04f0585 110 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.4E-15 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NIAKO_RS29945 f1f16ce090512039349c1a1467b9503c 500 Pfam PF03321 GH3 auxin-responsive promoter 19 491 4.0E-112 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS29945 f1f16ce090512039349c1a1467b9503c 500 PANTHER PTHR31901:SF5 2 495 2.0E-63 T 23-04-2016 NIAKO_RS29945 f1f16ce090512039349c1a1467b9503c 500 PANTHER PTHR31901 2 495 2.0E-63 T 23-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 SMART SM01119 261 351 5.9E-18 T 23-04-2016 IPR026956 D-serine dehydratase-like domain NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 Gene3D G3DSA:3.20.20.10 13 252 2.4E-19 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 PANTHER PTHR28004 5 368 2.5E-64 T 23-04-2016 NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 Pfam PF01168 Alanine racemase, N-terminal domain 25 244 4.6E-21 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 SUPERFAMILY SSF51419 25 251 6.98E-31 T 23-04-2016 IPR029066 PLP-binding barrel NIAKO_RS18050 fd012dda300077cedcf85c6542086b55 370 Pfam PF14031 Putative serine dehydratase domain 261 349 9.3E-15 T 23-04-2016 IPR026956 D-serine dehydratase-like domain NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 Gene3D G3DSA:2.60.120.380 512 628 1.3E-23 T 23-04-2016 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 437 447 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1694 1765 1.4E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 PRINTS PR00723 Subtilisin serine protease family (S8) signature 231 250 1.0E-8 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 PRINTS PR00723 Subtilisin serine protease family (S8) signature 436 452 1.0E-8 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 PRINTS PR00723 Subtilisin serine protease family (S8) signature 261 274 1.0E-8 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 SUPERFAMILY SSF52743 170 683 3.93E-42 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 SUPERFAMILY SSF52743 89 122 3.93E-42 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 SUPERFAMILY SSF49265 725 803 1.89E-5 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 Pfam PF00082 Subtilase family 256 493 2.2E-26 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 Gene3D G3DSA:3.40.50.200 218 501 5.6E-41 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NIAKO_RS12520 e749b30cbf121751240972f705efc671 1765 SUPERFAMILY SSF49899 1242 1407 3.48E-5 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS17805 f7da17b85f809dd2549fed2e1ae0bf6f 316 SUPERFAMILY SSF48452 101 179 2.91E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17805 f7da17b85f809dd2549fed2e1ae0bf6f 316 Gene3D G3DSA:1.25.40.10 100 180 4.1E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 PANTHER PTHR30469 1 368 2.8E-49 T 23-04-2016 NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 368 1.3E-56 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 SUPERFAMILY SSF111369 61 294 4.18E-20 T 23-04-2016 NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 289 4.6E-24 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 Gene3D G3DSA:2.40.50.100 182 210 1.2E-16 T 23-04-2016 NIAKO_RS23755 6aa3189a4bc0c7d0a6a81880a9b232ab 375 Gene3D G3DSA:2.40.50.100 73 106 1.2E-16 T 23-04-2016 NIAKO_RS07045 15b731937aa60429caa5d452f4fe3f4c 279 PANTHER PTHR23150 46 274 4.0E-57 T 23-04-2016 NIAKO_RS07045 15b731937aa60429caa5d452f4fe3f4c 279 Pfam PF03781 Sulfatase-modifying factor enzyme 1 27 274 3.8E-52 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS07045 15b731937aa60429caa5d452f4fe3f4c 279 Gene3D G3DSA:3.90.1580.10 23 275 1.2E-62 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme NIAKO_RS07045 15b731937aa60429caa5d452f4fe3f4c 279 SUPERFAMILY SSF56436 27 274 6.78E-62 T 23-04-2016 IPR016187 C-type lectin fold NIAKO_RS36445 8d0a767594a1ff3e96d292ecc79de8ea 252 PANTHER PTHR39200 24 250 4.2E-29 T 23-04-2016 NIAKO_RS36445 8d0a767594a1ff3e96d292ecc79de8ea 252 PANTHER PTHR39200:SF1 24 250 4.2E-29 T 23-04-2016 NIAKO_RS36445 8d0a767594a1ff3e96d292ecc79de8ea 252 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 31 114 2.4E-14 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS36445 8d0a767594a1ff3e96d292ecc79de8ea 252 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 122 235 1.1E-25 T 23-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain NIAKO_RS33300 85a2ab9e80d87a5c124b31dcce1b350d 326 SUPERFAMILY SSF53448 3 274 3.38E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS33300 85a2ab9e80d87a5c124b31dcce1b350d 326 Pfam PF13641 Glycosyltransferase like family 2 5 226 1.7E-14 T 23-04-2016 NIAKO_RS33300 85a2ab9e80d87a5c124b31dcce1b350d 326 Gene3D G3DSA:3.90.550.10 5 226 4.1E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS33300 85a2ab9e80d87a5c124b31dcce1b350d 326 PANTHER PTHR22916 5 306 2.6E-21 T 23-04-2016 NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 SUPERFAMILY SSF49464 549 617 8.63E-6 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Pfam PF13620 Carboxypeptidase regulatory-like domain 452 526 4.6E-8 T 23-04-2016 NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 SUPERFAMILY SSF49464 28 104 5.69E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Gene3D G3DSA:2.60.40.1120 125 201 8.0E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Gene3D G3DSA:2.60.40.1120 26 104 5.3E-6 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Gene3D G3DSA:2.60.40.1120 453 526 1.7E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Pfam PF08486 Stage II sporulation protein 705 786 3.4E-7 T 23-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 Pfam PF08486 Stage II sporulation protein 276 359 1.9E-8 T 23-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 SUPERFAMILY SSF49464 125 206 2.62E-7 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS24605 3f3d95d2b561d4caee05b716982cb901 967 SUPERFAMILY SSF49464 453 534 6.67E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS28605 fc9f0b7decfe85c14fffabb0dc60ebc9 227 PANTHER PTHR31876 14 224 6.9E-30 T 23-04-2016 NIAKO_RS28605 fc9f0b7decfe85c14fffabb0dc60ebc9 227 Pfam PF04367 Protein of unknown function (DUF502) 71 172 4.2E-25 T 23-04-2016 IPR007462 Protein of unknown function DUF502 NIAKO_RS28605 fc9f0b7decfe85c14fffabb0dc60ebc9 227 PANTHER PTHR31876:SF1 14 224 6.9E-30 T 23-04-2016 NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 Pfam PF16344 Domain of unknown function (DUF4974) 324 413 5.0E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 Pfam PF04773 FecR protein 200 312 4.0E-13 T 23-04-2016 IPR006860 FecR protein NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 PANTHER PTHR30273 1 130 5.3E-61 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 PANTHER PTHR30273 202 423 5.3E-61 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 PANTHER PTHR30273:SF2 1 130 5.3E-61 T 23-04-2016 NIAKO_RS00995 ff5021c5338bdd965278bfba26637d9b 423 PANTHER PTHR30273:SF2 202 423 5.3E-61 T 23-04-2016 NIAKO_RS32215 502e752c359b55070580b22a03a50637 213 SMART SM00464 4 189 6.3E-6 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NIAKO_RS32215 502e752c359b55070580b22a03a50637 213 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 144 3.7E-13 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NIAKO_RS32215 502e752c359b55070580b22a03a50637 213 SUPERFAMILY SSF88697 5 181 5.72E-26 T 23-04-2016 IPR015947 PUA-like domain NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273 177 314 6.9E-47 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273 59 104 6.9E-47 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273 332 416 6.9E-47 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 Pfam PF04773 FecR protein 175 270 1.4E-16 T 23-04-2016 IPR006860 FecR protein NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273:SF2 177 314 6.9E-47 T 23-04-2016 NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273:SF2 59 104 6.9E-47 T 23-04-2016 NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 PANTHER PTHR30273:SF2 332 416 6.9E-47 T 23-04-2016 NIAKO_RS09015 fc8387754a81bb247ff926146a95ed9a 416 Pfam PF16344 Domain of unknown function (DUF4974) 335 408 2.7E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS07315 5a5ab18e15324c515e1129b11fb58a46 342 Pfam PF11751 Protein of unknown function (DUF3308) 25 324 4.8E-49 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS07315 5a5ab18e15324c515e1129b11fb58a46 342 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 8 324 3.3E-57 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SUPERFAMILY SSF48452 145 318 5.6E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SUPERFAMILY SSF48452 17 163 1.77E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 Gene3D G3DSA:1.25.40.10 21 138 2.8E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 Gene3D G3DSA:1.25.40.10 392 462 2.8E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 Gene3D G3DSA:1.25.40.10 211 291 2.8E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 Gene3D G3DSA:3.30.565.10 476 597 3.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 Pfam PF06580 Histidine kinase 421 500 6.8E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 PANTHER PTHR34220 400 595 4.0E-40 T 23-04-2016 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SUPERFAMILY SSF55874 477 570 1.08E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SMART SM00028 250 283 220.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SMART SM00028 210 243 22.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS36590 6d79a5f581d73c565d43df8800f69981 630 SMART SM00028 57 90 17.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS00965 8a3751ede46dcff285a5eba38a933453 121 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 11 113 1.6E-12 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III NIAKO_RS23585 27d1c0a6df8f240864f3eb86689c2727 308 Gene3D G3DSA:2.120.10.30 49 200 7.5E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS23585 27d1c0a6df8f240864f3eb86689c2727 308 SUPERFAMILY SSF101898 53 285 4.71E-18 T 23-04-2016 NIAKO_RS31605 c3eafc90bc39a516808aa6571ad02e4d 457 Gene3D G3DSA:1.25.40.10 49 72 3.1E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31605 c3eafc90bc39a516808aa6571ad02e4d 457 Gene3D G3DSA:1.25.40.10 107 192 3.1E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31605 c3eafc90bc39a516808aa6571ad02e4d 457 SUPERFAMILY SSF48452 36 195 5.01E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11580 7636aea7f6f3a2782f6cd7a1fb9390fc 247 Gene3D G3DSA:3.40.50.150 56 129 5.8E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS11580 7636aea7f6f3a2782f6cd7a1fb9390fc 247 SUPERFAMILY SSF53335 39 195 8.13E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS13695 1ba18dc5ddf4845d2173d33f24be537d 337 Pfam PF11751 Protein of unknown function (DUF3308) 17 322 2.2E-78 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS13695 1ba18dc5ddf4845d2173d33f24be537d 337 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 322 7.0E-86 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 Pfam PF07690 Major Facilitator Superfamily 19 413 2.6E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 PANTHER PTHR23501 6 509 4.2E-112 T 23-04-2016 NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 Gene3D G3DSA:1.20.1250.20 480 506 2.3E-19 T 23-04-2016 NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 Gene3D G3DSA:1.20.1250.20 272 424 2.3E-19 T 23-04-2016 NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 Gene3D G3DSA:1.20.1250.20 14 196 1.6E-29 T 23-04-2016 NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 SUPERFAMILY SSF103473 10 200 1.1E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 SUPERFAMILY SSF103473 248 423 1.1E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS20615 7d4253381a34bdf524099acd9f990758 512 SUPERFAMILY SSF103473 479 507 1.1E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS13475 6b90fc6947c32e610322f4753750fa5f 121 Gene3D G3DSA:3.40.30.10 28 96 8.5E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS13475 6b90fc6947c32e610322f4753750fa5f 121 SUPERFAMILY SSF52833 28 92 3.53E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS14890 dfdc9941b2d6328c965a4ea9dc88321a 416 Pfam PF12704 MacB-like periplasmic core domain 26 254 7.3E-26 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS14890 dfdc9941b2d6328c965a4ea9dc88321a 416 PANTHER PTHR30572 12 416 9.3E-61 T 23-04-2016 NIAKO_RS14890 dfdc9941b2d6328c965a4ea9dc88321a 416 Pfam PF02687 FtsX-like permease family 297 409 3.4E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 Gene3D G3DSA:2.70.70.10 334 469 7.7E-21 T 23-04-2016 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 PANTHER PTHR21666:SF200 30 298 4.3E-22 T 23-04-2016 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 PANTHER PTHR21666:SF200 331 471 4.3E-22 T 23-04-2016 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 SUPERFAMILY SSF51261 340 441 7.85E-14 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 PANTHER PTHR21666 30 298 4.3E-22 T 23-04-2016 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 PANTHER PTHR21666 331 471 4.3E-22 T 23-04-2016 NIAKO_RS34455 f55fa9d3560758fc00232f01f1485700 471 Pfam PF01551 Peptidase family M23 374 463 1.4E-11 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS05470 26f2f59630c9142d02054c93119ec063 641 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 550 641 6.5E-10 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS05470 26f2f59630c9142d02054c93119ec063 641 Pfam PF13585 C-terminal domain of CHU protein family 549 639 1.3E-15 T 23-04-2016 NIAKO_RS21275 1f1f3f573d4ef40216dcc930a9a22773 269 Pfam PF13649 Methyltransferase domain 48 146 1.9E-16 T 23-04-2016 NIAKO_RS21275 1f1f3f573d4ef40216dcc930a9a22773 269 Gene3D G3DSA:3.40.50.150 6 206 3.0E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21275 1f1f3f573d4ef40216dcc930a9a22773 269 SUPERFAMILY SSF53335 32 226 2.99E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS21275 1f1f3f573d4ef40216dcc930a9a22773 269 PANTHER PTHR10108 33 151 9.4E-18 T 23-04-2016 NIAKO_RS34235 f6a945bb895243a45d3392b089f97d67 137 SUPERFAMILY SSF52540 21 126 4.14E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34235 f6a945bb895243a45d3392b089f97d67 137 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 131 1.8E-31 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NIAKO_RS34235 f6a945bb895243a45d3392b089f97d67 137 Gene3D G3DSA:3.40.50.300 6 135 1.9E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS34235 f6a945bb895243a45d3392b089f97d67 137 PANTHER PTHR33540 17 134 2.2E-28 T 23-04-2016 NIAKO_RS34235 f6a945bb895243a45d3392b089f97d67 137 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 126 1.2E-32 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NIAKO_RS25545 61f7d950d27652064d06f81e7771ace9 108 SUPERFAMILY SSF54593 4 107 3.44E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS25545 61f7d950d27652064d06f81e7771ace9 108 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 103 1.9E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS25545 61f7d950d27652064d06f81e7771ace9 108 Gene3D G3DSA:3.10.180.10 3 107 9.6E-16 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS25535 f43ecce397cf7a70e235787cfbd245a7 114 Pfam PF14534 Domain of unknown function (DUF4440) 5 107 8.9E-18 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 NIAKO_RS25535 f43ecce397cf7a70e235787cfbd245a7 114 Gene3D G3DSA:3.10.450.50 15 108 3.0E-6 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS25535 f43ecce397cf7a70e235787cfbd245a7 114 SUPERFAMILY SSF54427 3 108 2.93E-17 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 Gene3D G3DSA:1.10.390.10 405 538 3.3E-13 T 23-04-2016 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533 268 549 2.3E-13 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533 56 84 2.3E-13 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533 131 235 2.3E-13 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533:SF163 268 549 2.3E-13 T 23-04-2016 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533:SF163 56 84 2.3E-13 T 23-04-2016 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 PANTHER PTHR11533:SF163 131 235 2.3E-13 T 23-04-2016 NIAKO_RS30885 5317e56ccdebdc894d26f479089325d8 619 SUPERFAMILY SSF55486 330 536 1.32E-22 T 23-04-2016 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 SUPERFAMILY SSF111384 23 165 2.75E-20 T 23-04-2016 IPR024930 Skp domain NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 SMART SM00935 12 165 6.7E-28 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 PANTHER PTHR35089 2 171 1.3E-23 T 23-04-2016 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 PANTHER PTHR35089:SF1 2 171 1.3E-23 T 23-04-2016 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 Gene3D G3DSA:3.30.910.20 13 59 1.7E-22 T 23-04-2016 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 Gene3D G3DSA:3.30.910.20 97 165 1.7E-22 T 23-04-2016 NIAKO_RS32455 e2365472491a64d03e14e33400367c13 188 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 1.2E-29 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 NIAKO_RS26010 46f4f4917d724bf36577a12d39276dae 218 PANTHER PTHR30246:SF4 1 218 4.2E-53 T 23-04-2016 NIAKO_RS26010 46f4f4917d724bf36577a12d39276dae 218 Pfam PF01081 KDPG and KHG aldolase 6 205 5.0E-34 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 NIAKO_RS26010 46f4f4917d724bf36577a12d39276dae 218 SUPERFAMILY SSF51569 2 214 2.75E-53 T 23-04-2016 NIAKO_RS26010 46f4f4917d724bf36577a12d39276dae 218 PANTHER PTHR30246 1 218 4.2E-53 T 23-04-2016 NIAKO_RS26010 46f4f4917d724bf36577a12d39276dae 218 Gene3D G3DSA:3.20.20.70 1 217 5.0E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 SMART SM00782 6 52 7.2E-16 T 23-04-2016 IPR013991 PhnA protein N-terminal, proteobacterial NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 Gene3D G3DSA:2.30.30.40 125 191 3.9E-23 T 23-04-2016 NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 SUPERFAMILY SSF82057 122 191 5.04E-20 T 23-04-2016 NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 Pfam PF03831 PhnA domain 125 192 3.9E-25 T 23-04-2016 IPR013988 PhnA protein, C-terminal NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 PANTHER PTHR30305 1 192 1.4E-51 T 23-04-2016 NIAKO_RS08890 0d80255e1a3b461843e5fa50b42f53c4 194 PANTHER PTHR30305:SF2 1 192 1.4E-51 T 23-04-2016 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 SUPERFAMILY SSF48452 27 465 3.54E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 SUPERFAMILY SSF48452 548 631 3.54E-87 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 Pfam PF14322 Starch-binding associating with outer membrane 54 190 1.9E-30 T 23-04-2016 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 Gene3D G3DSA:1.25.40.10 402 464 1.0E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 Gene3D G3DSA:1.25.40.10 171 279 1.0E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 Gene3D G3DSA:1.25.40.10 531 565 1.0E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS09690 65b7525016199fc8fb8adb8d7938521b 631 Pfam PF07980 SusD family 249 631 2.5E-47 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS08225 de2f369c28e182f69ea013c096afb6a1 95 Gene3D G3DSA:1.20.58.280 33 65 0.001 T 23-04-2016 IPR007330 MIT NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 PANTHER PTHR10992:SF758 193 424 1.9E-55 T 23-04-2016 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 PRINTS PR00111 Alpha/beta hydrolase fold signature 294 307 1.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 PRINTS PR00111 Alpha/beta hydrolase fold signature 280 293 1.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 PRINTS PR00111 Alpha/beta hydrolase fold signature 236 251 1.1E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 PANTHER PTHR10992 193 424 1.9E-55 T 23-04-2016 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 SUPERFAMILY SSF53474 188 423 1.72E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 Pfam PF00561 alpha/beta hydrolase fold 212 315 8.8E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 Gene3D G3DSA:3.40.50.1820 357 424 9.6E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS36915 3027c786b50130fd2e2188313fb175c6 425 Gene3D G3DSA:3.40.50.1820 191 356 2.3E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 239 8.7E-15 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 SUPERFAMILY SSF51735 2 153 1.48E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 SUPERFAMILY SSF55347 127 281 8.99E-29 T 23-04-2016 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 PANTHER PTHR22604 2 337 3.2E-110 T 23-04-2016 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 PANTHER PTHR22604:SF53 2 337 3.2E-110 T 23-04-2016 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 Gene3D G3DSA:3.40.50.720 1 127 5.3E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 Gene3D G3DSA:3.30.360.10 286 339 3.3E-33 T 23-04-2016 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 Gene3D G3DSA:3.30.360.10 128 250 3.3E-33 T 23-04-2016 NIAKO_RS18055 eb80ca765888b9978a2a5bc3f17186ae 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.3E-26 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 16 359 9.0E-131 T 23-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 50 359 1.5E-104 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 Pfam PF04055 Radical SAM superfamily 58 225 1.9E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 SUPERFAMILY SSF102114 16 352 5.36E-44 T 23-04-2016 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 Gene3D G3DSA:3.20.20.70 16 352 9.0E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 PIRSF PIRSF004762 1 372 2.5E-88 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 PANTHER PTHR22976 3 359 1.0E-144 T 23-04-2016 NIAKO_RS31720 b35d3b7d228acfc80c1b9ed967472e0b 374 PANTHER PTHR22976:SF29 3 359 1.0E-144 T 23-04-2016 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 Pfam PF16313 Met-zincin 462 778 2.4E-85 T 23-04-2016 IPR032534 Domian of unknown function DUF4953 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 Pfam PF17148 Domain of unknown function (DUF5117) 189 294 9.5E-16 T 23-04-2016 IPR033413 Domain of unknown function DUF5117 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 Gene3D G3DSA:3.40.390.10 283 396 1.7E-15 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 Gene3D G3DSA:3.40.390.10 468 550 1.7E-15 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 SUPERFAMILY SSF55486 295 406 1.88E-21 T 23-04-2016 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 SUPERFAMILY SSF55486 467 549 1.88E-21 T 23-04-2016 NIAKO_RS25940 ed0b92255a3aa11b84e09fb3a5c8bfd2 856 PANTHER PTHR38478 45 807 1.3E-105 T 23-04-2016 NIAKO_RS22010 cacdb1f915f41628b236436772c5510f 248 Pfam PF06439 Domain of Unknown Function (DUF1080) 54 246 6.4E-40 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS22010 cacdb1f915f41628b236436772c5510f 248 PANTHER PTHR33546 102 248 1.2E-21 T 23-04-2016 NIAKO_RS22010 cacdb1f915f41628b236436772c5510f 248 PANTHER PTHR33546:SF1 102 248 1.2E-21 T 23-04-2016 NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 151 183 5.6E-10 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 159 187 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 Gene3D G3DSA:2.160.10.10 69 203 1.9E-34 T 23-04-2016 NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 PANTHER PTHR23416 86 202 2.4E-25 T 23-04-2016 NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 SUPERFAMILY SSF51161 86 202 4.16E-32 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS33270 5998338c6e913516b76fb34baad10592 204 PANTHER PTHR23416:SF23 86 202 2.4E-25 T 23-04-2016 NIAKO_RS28200 1f9696fdf052ae3d17274a9e5687508a 397 Pfam PF16401 Domain of unknown function (DUF5009) 9 213 1.6E-10 T 23-04-2016 IPR032176 Domain of unknown function DUF5009 NIAKO_RS28200 1f9696fdf052ae3d17274a9e5687508a 397 PANTHER PTHR31061 6 100 2.2E-22 T 23-04-2016 NIAKO_RS15625 0e9d63fb999370a8958f3788dafaff49 95 PANTHER PTHR24012 1 92 1.8E-33 T 23-04-2016 NIAKO_RS15625 0e9d63fb999370a8958f3788dafaff49 95 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 9.4E-25 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS15625 0e9d63fb999370a8958f3788dafaff49 95 SMART SM00360 2 75 4.8E-30 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS15625 0e9d63fb999370a8958f3788dafaff49 95 Gene3D G3DSA:3.30.70.330 2 92 2.7E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS15625 0e9d63fb999370a8958f3788dafaff49 95 SUPERFAMILY SSF54928 2 93 1.88E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS37325 eef35e3da9fa6ba2c68a67ca98f9bbe7 100 PANTHER PTHR10245 3 99 2.2E-13 T 23-04-2016 NIAKO_RS37325 eef35e3da9fa6ba2c68a67ca98f9bbe7 100 SUPERFAMILY SSF47413 1 64 3.1E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS37325 eef35e3da9fa6ba2c68a67ca98f9bbe7 100 SMART SM00530 7 62 1.0E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS37325 eef35e3da9fa6ba2c68a67ca98f9bbe7 100 Gene3D G3DSA:1.10.260.40 4 91 7.6E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS37325 eef35e3da9fa6ba2c68a67ca98f9bbe7 100 Pfam PF01381 Helix-turn-helix 8 61 3.4E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS09650 0bdd241633bbab145ca7139e6c027951 86 SUPERFAMILY SSF160574 20 79 8.24E-10 T 23-04-2016 NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 SUPERFAMILY SSF48179 172 281 8.62E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 Gene3D G3DSA:3.40.50.720 2 177 6.7E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 SUPERFAMILY SSF51735 5 169 2.84E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 PANTHER PTHR21363:SF0 4 281 1.6E-56 T 23-04-2016 NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 PANTHER PTHR21363 4 281 1.6E-56 T 23-04-2016 NIAKO_RS22120 bde99028f6d35c9888a69e040cbecc7c 282 Pfam PF02153 Prephenate dehydrogenase 18 272 2.0E-67 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 NIAKO_RS09325 efc0d02164c31de3e60404f3d00a28e1 314 PANTHER PTHR30040 17 312 1.1E-84 T 23-04-2016 NIAKO_RS09325 efc0d02164c31de3e60404f3d00a28e1 314 PANTHER PTHR30040:SF2 17 312 1.1E-84 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS09325 efc0d02164c31de3e60404f3d00a28e1 314 Pfam PF02424 ApbE family 18 294 1.0E-73 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS09325 efc0d02164c31de3e60404f3d00a28e1 314 PIRSF PIRSF006268 4 314 5.5E-90 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NIAKO_RS09325 efc0d02164c31de3e60404f3d00a28e1 314 SUPERFAMILY SSF143631 12 311 2.62E-91 T 23-04-2016 IPR003374 ApbE-like domain NIAKO_RS35395 0e625272a5fde6febf96ba39384f6799 677 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 303 392 9.5E-15 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS35395 0e625272a5fde6febf96ba39384f6799 677 PANTHER PTHR11219 295 430 3.9E-13 T 23-04-2016 NIAKO_RS34160 ed8e8d97f8c50cdb4848a77069ce82b4 291 PIRSF PIRSF003097 1 285 1.7E-54 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 NIAKO_RS34160 ed8e8d97f8c50cdb4848a77069ce82b4 291 Pfam PF02687 FtsX-like permease family 170 278 1.0E-5 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS32345 12d5c4adf8c9cf705ecd051ec36facf1 189 Pfam PF11138 Protein of unknown function (DUF2911) 52 185 3.4E-49 T 23-04-2016 IPR021314 Protein of unknown function DUF2911 NIAKO_RS30315 bf1b54ac2b7e816f979b986ee636d3e1 173 Gene3D G3DSA:1.20.5.170 1 76 2.3E-6 T 23-04-2016 NIAKO_RS30315 bf1b54ac2b7e816f979b986ee636d3e1 173 SUPERFAMILY SSF161266 13 164 6.54E-24 T 23-04-2016 NIAKO_RS30315 bf1b54ac2b7e816f979b986ee636d3e1 173 Pfam PF07352 Bacteriophage Mu Gam like protein 15 163 2.2E-34 T 23-04-2016 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 Gene3D G3DSA:3.40.30.10 4 115 2.0E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 PANTHER PTHR10438 27 90 1.1E-23 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 Pfam PF00085 Thioredoxin 28 114 5.0E-23 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 ProSitePatterns PS00194 Thioredoxin family active site. 33 51 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 PRINTS PR00421 Thioredoxin family signature 32 40 1.8E-7 T 23-04-2016 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 PRINTS PR00421 Thioredoxin family signature 80 91 1.8E-7 T 23-04-2016 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 PRINTS PR00421 Thioredoxin family signature 40 49 1.8E-7 T 23-04-2016 NIAKO_RS04075 46b3d19488161df5c875ec2c922af481 123 SUPERFAMILY SSF52833 14 115 7.58E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 SUPERFAMILY SSF81296 221 304 7.26E-9 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Gene3D G3DSA:2.60.40.10 221 298 8.9E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Gene3D G3DSA:2.60.40.10 50 122 8.1E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Gene3D G3DSA:2.60.40.10 134 212 3.3E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 SUPERFAMILY SSF81296 50 131 4.2E-9 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 SUPERFAMILY SSF81296 135 212 1.11E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Pfam PF01833 IPT/TIG domain 136 212 5.1E-6 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Pfam PF01833 IPT/TIG domain 51 129 1.3E-7 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS06485 83c4e6ca8005bc9c32ceb03fc332b1cf 314 Pfam PF01833 IPT/TIG domain 222 310 9.8E-8 T 23-04-2016 IPR002909 IPT domain GO:0005515 NIAKO_RS13105 083b131e620bc4c787ac57872ecc3e7f 236 SUPERFAMILY SSF51182 9 229 1.18E-19 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS13105 083b131e620bc4c787ac57872ecc3e7f 236 Gene3D G3DSA:2.60.120.10 12 229 1.7E-12 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS13775 80bf0a4db75f932a4e47882b677f134a 371 Pfam PF04397 LytTr DNA-binding domain 271 369 8.2E-17 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS13775 80bf0a4db75f932a4e47882b677f134a 371 SMART SM00850 270 370 6.9E-20 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS13775 80bf0a4db75f932a4e47882b677f134a 371 Gene3D G3DSA:3.30.450.20 70 182 2.3E-8 T 23-04-2016 NIAKO_RS13775 80bf0a4db75f932a4e47882b677f134a 371 Gene3D G3DSA:2.40.50.40 262 330 7.1E-10 T 23-04-2016 NIAKO_RS26445 550fa3fb66c7dd9409eb3a8cb3ad2704 368 PANTHER PTHR41379 1 343 5.8E-79 T 23-04-2016 NIAKO_RS26445 550fa3fb66c7dd9409eb3a8cb3ad2704 368 Pfam PF05426 Alginate lyase 42 319 1.9E-80 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS26445 550fa3fb66c7dd9409eb3a8cb3ad2704 368 SUPERFAMILY SSF48230 46 328 4.76E-48 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS26445 550fa3fb66c7dd9409eb3a8cb3ad2704 368 Gene3D G3DSA:1.50.10.110 26 360 5.6E-73 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NIAKO_RS26445 550fa3fb66c7dd9409eb3a8cb3ad2704 368 PANTHER PTHR41379:SF1 1 343 5.8E-79 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 PANTHER PTHR30307:SF0 335 408 1.6E-108 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 PANTHER PTHR30307:SF0 7 291 1.6E-108 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 Pfam PF02547 Queuosine biosynthesis protein 9 406 3.2E-96 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 SUPERFAMILY SSF111337 335 406 4.45E-95 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 SUPERFAMILY SSF111337 7 290 4.45E-95 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 PANTHER PTHR30307 335 408 1.6E-108 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 PANTHER PTHR30307 7 291 1.6E-108 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 Gene3D G3DSA:3.40.1780.10 203 291 1.8E-76 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 Gene3D G3DSA:3.40.1780.10 6 65 1.8E-76 T 23-04-2016 NIAKO_RS35970 2f469852826cb2a0c263604f8993c770 409 Gene3D G3DSA:3.40.1780.10 337 406 1.8E-76 T 23-04-2016 NIAKO_RS25810 92404fd957c1a908802ae268164e0efd 329 Pfam PF14725 Domain of unknown function (DUF4466) 25 329 1.9E-142 T 23-04-2016 IPR028072 Domain of unknown function DUF4466 NIAKO_RS37485 7dd132c263dc778e5016d95ba4041481 423 Pfam PF14099 Polysaccharide lyase 74 264 1.5E-30 T 23-04-2016 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 NIAKO_RS08295 bded03b65ac5cef22aff3a8b76308130 183 Gene3D G3DSA:3.40.430.10 3 180 6.9E-23 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS08295 bded03b65ac5cef22aff3a8b76308130 183 PANTHER PTHR38011:SF2 2 183 7.6E-29 T 23-04-2016 NIAKO_RS08295 bded03b65ac5cef22aff3a8b76308130 183 Pfam PF01872 RibD C-terminal domain 2 174 4.8E-20 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS08295 bded03b65ac5cef22aff3a8b76308130 183 SUPERFAMILY SSF53597 1 180 8.77E-29 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS08295 bded03b65ac5cef22aff3a8b76308130 183 PANTHER PTHR38011 2 183 7.6E-29 T 23-04-2016 NIAKO_RS23300 b0d64409e3954fbeb6c0cff9ef7bcac2 416 SUPERFAMILY SSF56935 42 323 1.25E-6 T 23-04-2016 NIAKO_RS30415 22d13b77478f705be25362483dcc537d 82 Pfam PF01381 Helix-turn-helix 25 74 2.7E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS30415 22d13b77478f705be25362483dcc537d 82 SMART SM00530 22 77 0.0025 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS30415 22d13b77478f705be25362483dcc537d 82 SUPERFAMILY SSF47413 21 80 1.06E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS30415 22d13b77478f705be25362483dcc537d 82 Gene3D G3DSA:1.10.260.40 30 74 9.3E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS33295 b2243c1e84bd3113040fb40a4f23e327 267 Pfam PF04321 RmlD substrate binding domain 5 148 3.8E-15 T 23-04-2016 IPR029903 RmlD-like substrate binding domain NIAKO_RS33295 b2243c1e84bd3113040fb40a4f23e327 267 SUPERFAMILY SSF51735 6 242 1.63E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33295 b2243c1e84bd3113040fb40a4f23e327 267 Gene3D G3DSA:3.40.50.720 5 227 6.2E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33295 b2243c1e84bd3113040fb40a4f23e327 267 PANTHER PTHR10491 1 238 4.8E-14 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NIAKO_RS13570 333e4147013a863706a190a4088baf09 297 SUPERFAMILY SSF50998 65 260 1.96E-5 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS13570 333e4147013a863706a190a4088baf09 297 Gene3D G3DSA:2.130.10.140 129 251 4.1E-5 T 23-04-2016 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 SUPERFAMILY SSF48452 420 657 5.69E-61 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 SUPERFAMILY SSF48452 20 323 5.69E-61 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 PANTHER PTHR35148 428 582 2.2E-15 T 23-04-2016 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 PANTHER PTHR35148 600 662 2.2E-15 T 23-04-2016 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 PANTHER PTHR35148 1 316 2.2E-15 T 23-04-2016 NIAKO_RS19185 b2ef34a3e9a4059ec0de07659a4e4b3b 669 Pfam PF12771 Starch-binding associating with outer membrane 103 227 8.0E-17 T 23-04-2016 NIAKO_RS21480 16cbb7920ed0f8e4da055c16a8bcf40b 291 SUPERFAMILY SSF56317 1 285 1.06E-88 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS21480 16cbb7920ed0f8e4da055c16a8bcf40b 291 Pfam PF00795 Carbon-nitrogen hydrolase 5 266 6.5E-57 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS21480 16cbb7920ed0f8e4da055c16a8bcf40b 291 PANTHER PTHR23088 1 286 1.3E-140 T 23-04-2016 NIAKO_RS21480 16cbb7920ed0f8e4da055c16a8bcf40b 291 PANTHER PTHR23088:SF11 1 286 1.3E-140 T 23-04-2016 NIAKO_RS21480 16cbb7920ed0f8e4da055c16a8bcf40b 291 Gene3D G3DSA:3.60.110.10 1 285 6.6E-100 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NIAKO_RS32520 244045020bd26c2854d50a40b217b220 444 PANTHER PTHR30354 3 444 4.4E-108 T 23-04-2016 NIAKO_RS32520 244045020bd26c2854d50a40b217b220 444 Pfam PF02447 GntP family permease 9 442 5.9E-96 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS04530 79a62de36b24f5f4f1b2dd49d6e96346 186 Gene3D G3DSA:2.40.128.110 55 179 3.5E-21 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS04530 79a62de36b24f5f4f1b2dd49d6e96346 186 SUPERFAMILY SSF101874 48 179 8.76E-23 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS04530 79a62de36b24f5f4f1b2dd49d6e96346 186 Pfam PF04264 YceI-like domain 48 177 2.2E-15 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIAKO_RS29605 5e66cd48bf5e54d9af7e3875aec701c1 216 Gene3D G3DSA:1.25.40.10 94 209 2.3E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29605 5e66cd48bf5e54d9af7e3875aec701c1 216 Pfam PF13181 Tetratricopeptide repeat 129 154 0.0071 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS29605 5e66cd48bf5e54d9af7e3875aec701c1 216 SUPERFAMILY SSF48452 90 210 6.83E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31270 637c7f8351b6be1cdbaa05d3ebf22ae5 199 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 8 199 43.562 T 23-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS31270 637c7f8351b6be1cdbaa05d3ebf22ae5 199 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 147 189 1.5E-11 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS31270 637c7f8351b6be1cdbaa05d3ebf22ae5 199 Gene3D G3DSA:1.20.1290.10 35 193 4.9E-35 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS31270 637c7f8351b6be1cdbaa05d3ebf22ae5 199 Pfam PF02627 Carboxymuconolactone decarboxylase family 142 190 1.0E-6 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS31270 637c7f8351b6be1cdbaa05d3ebf22ae5 199 SUPERFAMILY SSF69118 32 192 1.37E-26 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 Gene3D G3DSA:3.30.70.1260 96 161 6.2E-5 T 23-04-2016 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 PANTHER PTHR36439:SF1 1 164 1.8E-27 T 23-04-2016 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 PIRSF PIRSF008502 1 164 9.0E-41 T 23-04-2016 IPR012545 Protein of unknown function DUF1697 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 Pfam PF08002 Protein of unknown function (DUF1697) 1 121 2.7E-33 T 23-04-2016 IPR012545 Protein of unknown function DUF1697 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 PANTHER PTHR36439 1 164 1.8E-27 T 23-04-2016 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 Gene3D G3DSA:3.30.70.1280 2 71 4.6E-21 T 23-04-2016 NIAKO_RS16375 b815c8487be5e834a72e046deb9f462e 164 SUPERFAMILY SSF160379 2 161 1.31E-42 T 23-04-2016 NIAKO_RS12335 7e68895e6a35f6b0302494a2b7600351 295 Gene3D G3DSA:3.40.50.720 1 234 8.6E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12335 7e68895e6a35f6b0302494a2b7600351 295 PANTHER PTHR10366:SF475 2 289 4.8E-95 T 23-04-2016 NIAKO_RS12335 7e68895e6a35f6b0302494a2b7600351 295 SUPERFAMILY SSF51735 1 283 1.25E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS12335 7e68895e6a35f6b0302494a2b7600351 295 PANTHER PTHR10366 2 289 4.8E-95 T 23-04-2016 NIAKO_RS12335 7e68895e6a35f6b0302494a2b7600351 295 Pfam PF13460 NAD(P)H-binding 7 156 1.6E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS30120 776503859fee5080720e245fe0e7e6b2 145 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 106 1.4E-7 T 23-04-2016 IPR008687 Bacterial mobilisation NIAKO_RS36305 2e3a9573242677c93976f7c9484a0e71 1316 SUPERFAMILY SSF48371 738 1049 1.34E-5 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS36305 2e3a9573242677c93976f7c9484a0e71 1316 Pfam PF13699 Domain of unknown function (DUF4157) 182 257 7.3E-29 T 23-04-2016 IPR025295 Domain of unknown function DUF4157 NIAKO_RS07585 b9ed4571fb947d49d70f0b5895f32045 370 SUPERFAMILY SSF51004 15 368 2.62E-52 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NIAKO_RS07585 b9ed4571fb947d49d70f0b5895f32045 370 PANTHER PTHR30344:SF1 1 370 5.0E-135 T 23-04-2016 NIAKO_RS07585 b9ed4571fb947d49d70f0b5895f32045 370 PANTHER PTHR30344 1 370 5.0E-135 T 23-04-2016 NIAKO_RS07585 b9ed4571fb947d49d70f0b5895f32045 370 Pfam PF10282 Lactonase, 7-bladed beta-propeller 25 366 2.2E-127 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NIAKO_RS07585 b9ed4571fb947d49d70f0b5895f32045 370 Gene3D G3DSA:2.130.10.10 23 367 6.4E-110 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS30810 aa62a7a51dc5dbaf044182a6e80c7f17 265 Pfam PF06439 Domain of Unknown Function (DUF1080) 59 263 9.5E-47 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS32635 e49275fcc574352c54fbafe2599f07f6 360 Gene3D G3DSA:2.60.40.1120 26 117 1.1E-12 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS32635 e49275fcc574352c54fbafe2599f07f6 360 Pfam PF13715 CarboxypepD_reg-like domain 27 112 1.8E-17 T 23-04-2016 NIAKO_RS32635 e49275fcc574352c54fbafe2599f07f6 360 PANTHER PTHR30069:SF11 19 114 2.7E-17 T 23-04-2016 NIAKO_RS32635 e49275fcc574352c54fbafe2599f07f6 360 PANTHER PTHR30069 19 114 2.7E-17 T 23-04-2016 NIAKO_RS32635 e49275fcc574352c54fbafe2599f07f6 360 SUPERFAMILY SSF49464 24 110 1.44E-13 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS18045 590f31179a21c247929ac00331f10fde 438 PIRSF PIRSF002746 1 438 2.4E-144 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS18045 590f31179a21c247929ac00331f10fde 438 PANTHER PTHR30354:SF1 1 438 4.0E-173 T 23-04-2016 NIAKO_RS18045 590f31179a21c247929ac00331f10fde 438 Pfam PF02447 GntP family permease 3 435 2.3E-150 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS18045 590f31179a21c247929ac00331f10fde 438 PANTHER PTHR30354 1 438 4.0E-173 T 23-04-2016 NIAKO_RS18045 590f31179a21c247929ac00331f10fde 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 3 437 2.6E-153 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NIAKO_RS18715 482f5270e427903f0b2c51c5bec7a80c 395 Pfam PF01734 Patatin-like phospholipase 26 225 1.7E-22 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NIAKO_RS18715 482f5270e427903f0b2c51c5bec7a80c 395 SUPERFAMILY SSF52151 21 282 7.59E-42 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS18715 482f5270e427903f0b2c51c5bec7a80c 395 PANTHER PTHR24185 24 260 2.1E-21 T 23-04-2016 NIAKO_RS18715 482f5270e427903f0b2c51c5bec7a80c 395 Gene3D G3DSA:3.40.1090.10 15 380 1.4E-66 T 23-04-2016 NIAKO_RS33775 44e391a7177e8626fc0db496d8923e98 490 Pfam PF13568 Outer membrane protein beta-barrel domain 279 461 1.6E-7 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS36490 6eceb2c7ce50ee2031ef3968964fe21a 154 PANTHER PTHR38480:SF1 20 150 2.2E-17 T 23-04-2016 NIAKO_RS36490 6eceb2c7ce50ee2031ef3968964fe21a 154 Pfam PF06271 RDD family 15 146 8.8E-20 T 23-04-2016 IPR010432 RDD NIAKO_RS36490 6eceb2c7ce50ee2031ef3968964fe21a 154 PANTHER PTHR38480 20 150 2.2E-17 T 23-04-2016 NIAKO_RS15485 c19d223ab731d96b15513384a877bfb4 114 SUPERFAMILY SSF55008 38 101 4.06E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS15485 c19d223ab731d96b15513384a877bfb4 114 Gene3D G3DSA:3.30.70.100 35 99 1.9E-11 T 23-04-2016 NIAKO_RS15485 c19d223ab731d96b15513384a877bfb4 114 Pfam PF00403 Heavy-metal-associated domain 39 98 4.0E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS25970 6b80e9a63d4c71334613906fda534e9b 340 SUPERFAMILY SSF160387 243 339 3.4E-12 T 23-04-2016 NIAKO_RS25970 6b80e9a63d4c71334613906fda534e9b 340 Pfam PF05573 NosL 211 338 3.0E-11 T 23-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL NIAKO_RS07415 35991a0aff1412f9e11502da63c14bc6 307 SUPERFAMILY SSF49299 29 120 3.92E-9 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07415 35991a0aff1412f9e11502da63c14bc6 307 Gene3D G3DSA:2.60.40.670 33 115 3.3E-5 T 23-04-2016 IPR000601 PKD domain NIAKO_RS07415 35991a0aff1412f9e11502da63c14bc6 307 SMART SM00089 33 120 1.4E-5 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS34930 1a83bf83c5a23730307298077371aa4c 342 PANTHER PTHR10366 15 338 1.9E-61 T 23-04-2016 NIAKO_RS34930 1a83bf83c5a23730307298077371aa4c 342 PANTHER PTHR10366:SF472 15 338 1.9E-61 T 23-04-2016 NIAKO_RS34930 1a83bf83c5a23730307298077371aa4c 342 Gene3D G3DSA:3.40.50.720 15 312 4.3E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34930 1a83bf83c5a23730307298077371aa4c 342 SUPERFAMILY SSF51735 12 323 5.67E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS34930 1a83bf83c5a23730307298077371aa4c 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 243 8.3E-28 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 Pfam PF07690 Major Facilitator Superfamily 2 381 3.1E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 PANTHER PTHR19432:SF35 1 426 5.9E-79 T 23-04-2016 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 Gene3D G3DSA:1.20.1250.20 243 422 1.8E-13 T 23-04-2016 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 Gene3D G3DSA:1.20.1250.20 1 195 1.2E-24 T 23-04-2016 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 PANTHER PTHR19432 1 426 5.9E-79 T 23-04-2016 NIAKO_RS10590 3768b30a5bc381096a94a20d1671aa5b 428 SUPERFAMILY SSF103473 1 423 3.27E-43 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS08310 64dc20a5cd402621020ce0ab3389c52a 186 Pfam PF03073 TspO/MBR family 19 157 1.3E-21 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS21010 eb8e73adcc7957dc2d1e6a821232ee13 479 Pfam PF13884 Chaperone of endosialidase 322 395 4.0E-13 T 23-04-2016 IPR030392 Intramolecular chaperone auto-processing domain NIAKO_RS18020 bc0d29c97a3f6a18ef96435d6bf1781d 145 SMART SM00953 14 139 4.5E-14 T 23-04-2016 IPR014914 RES domain NIAKO_RS18020 bc0d29c97a3f6a18ef96435d6bf1781d 145 Pfam PF08808 RES domain 2 136 5.4E-15 T 23-04-2016 IPR014914 RES domain NIAKO_RS18630 74e31a8cd246e12a4a0b815de353fcea 403 Pfam PF01566 Natural resistance-associated macrophage protein 32 375 3.5E-65 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 Gene3D G3DSA:3.40.30.10 17 104 5.3E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 PANTHER PTHR41709:SF2 20 104 1.9E-31 T 23-04-2016 NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 SMART SM01248 23 104 5.2E-39 T 23-04-2016 IPR011649 KaiB domain GO:0048511 NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 SUPERFAMILY SSF52833 12 104 2.59E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 PANTHER PTHR41709 20 104 1.9E-31 T 23-04-2016 NIAKO_RS15640 2c10725bb62cae38f077e9aebd6acf07 105 Pfam PF07689 KaiB domain 23 102 9.7E-25 T 23-04-2016 IPR011649 KaiB domain GO:0048511 NIAKO_RS28610 9dad231d18c6a7488d2b09c3a40b87de 321 Gene3D G3DSA:1.10.575.10 19 284 4.5E-33 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS28610 9dad231d18c6a7488d2b09c3a40b87de 321 SUPERFAMILY SSF48537 20 211 5.1E-21 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 NIAKO_RS00535 14af03cd7d1280d58514b190bb6df088 356 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 32 356 1.0E-74 T 23-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 NIAKO_RS00535 14af03cd7d1280d58514b190bb6df088 356 SUPERFAMILY SSF56935 29 296 2.2E-6 T 23-04-2016 NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 61 222 8.3E-31 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 SUPERFAMILY SSF52540 47 241 2.27E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 PANTHER PTHR30134 30 243 9.4E-113 T 23-04-2016 NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 PANTHER PTHR30134:SF2 30 243 9.4E-113 T 23-04-2016 NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 32 243 2.8E-85 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 PIRSF PIRSF005624 24 244 2.2E-89 T 23-04-2016 NIAKO_RS06225 bd7237489d86572d9a9f27c3ac7c08be 244 Gene3D G3DSA:3.40.50.300 67 225 1.4E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS02885 a3768af5931d74e56dbed336fbc5839f 65 PANTHER PTHR33099:SF6 7 63 4.6E-16 T 23-04-2016 NIAKO_RS02885 a3768af5931d74e56dbed336fbc5839f 65 PANTHER PTHR33099 7 63 4.6E-16 T 23-04-2016 NIAKO_RS18765 f1f6d9ae681ab90aa8a17c1edff8b318 289 SUPERFAMILY SSF56112 136 248 2.01E-8 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS18765 f1f6d9ae681ab90aa8a17c1edff8b318 289 Gene3D G3DSA:1.10.510.10 139 180 9.7E-5 T 23-04-2016 NIAKO_RS18765 f1f6d9ae681ab90aa8a17c1edff8b318 289 Gene3D G3DSA:1.10.510.10 219 231 9.7E-5 T 23-04-2016 NIAKO_RS02580 b24aceda9d7510e4930200b5366893aa 354 Gene3D G3DSA:3.20.20.190 121 240 3.0E-7 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS02580 b24aceda9d7510e4930200b5366893aa 354 Gene3D G3DSA:3.20.20.190 22 86 3.0E-7 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS02580 b24aceda9d7510e4930200b5366893aa 354 SUPERFAMILY SSF51695 118 323 1.52E-20 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS02580 b24aceda9d7510e4930200b5366893aa 354 SUPERFAMILY SSF51695 17 90 1.52E-20 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS02580 b24aceda9d7510e4930200b5366893aa 354 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 28 348 7.5E-127 T 23-04-2016 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent NIAKO_RS08210 a7e35e9164b8719d4e05d564782c2c93 469 SUPERFAMILY SSF52096 230 311 1.62E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS08210 a7e35e9164b8719d4e05d564782c2c93 469 SUPERFAMILY SSF52096 363 461 1.62E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS08210 a7e35e9164b8719d4e05d564782c2c93 469 Gene3D G3DSA:3.90.226.10 228 304 3.5E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS08210 a7e35e9164b8719d4e05d564782c2c93 469 Gene3D G3DSA:3.90.226.10 341 467 3.5E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS08210 a7e35e9164b8719d4e05d564782c2c93 469 Pfam PF03572 Peptidase family S41 245 451 4.2E-18 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS16720 9023150c9185b6fff659e3748f907837 78 Pfam PF13986 Domain of unknown function (DUF4224) 2 46 2.0E-17 T 23-04-2016 IPR025319 Domain of unknown function DUF4224 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 Gene3D G3DSA:3.40.190.10 77 185 1.3E-6 T 23-04-2016 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 Gene3D G3DSA:3.40.190.10 206 302 1.0E-9 T 23-04-2016 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 PANTHER PTHR30570:SF1 69 331 1.4E-15 T 23-04-2016 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 PANTHER PTHR30570 69 331 1.4E-15 T 23-04-2016 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 SUPERFAMILY SSF53850 72 331 2.57E-29 T 23-04-2016 NIAKO_RS34750 ac482a5e4cbc4bf3356d08f31c740ac9 343 Pfam PF12849 PBP superfamily domain 69 314 4.6E-22 T 23-04-2016 IPR024370 PBP domain NIAKO_RS28390 7877f5779c952500c2040aed0e856b74 211 PANTHER PTHR32479:SF11 105 210 5.0E-19 T 23-04-2016 NIAKO_RS28390 7877f5779c952500c2040aed0e856b74 211 Gene3D G3DSA:3.40.50.10420 40 210 4.0E-39 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NIAKO_RS28390 7877f5779c952500c2040aed0e856b74 211 SUPERFAMILY SSF100950 39 210 3.68E-36 T 23-04-2016 NIAKO_RS28390 7877f5779c952500c2040aed0e856b74 211 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 104 209 1.1E-24 T 23-04-2016 IPR003741 LUD domain NIAKO_RS28390 7877f5779c952500c2040aed0e856b74 211 PANTHER PTHR32479 105 210 5.0E-19 T 23-04-2016 NIAKO_RS06085 25532e0699f1eab58d627063c27242e8 200 Pfam PF04972 BON domain 3 69 6.5E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS06085 25532e0699f1eab58d627063c27242e8 200 Pfam PF04972 BON domain 78 146 1.4E-14 T 23-04-2016 IPR007055 BON domain NIAKO_RS06085 25532e0699f1eab58d627063c27242e8 200 Pfam PF04972 BON domain 151 200 6.5E-8 T 23-04-2016 IPR007055 BON domain NIAKO_RS06085 25532e0699f1eab58d627063c27242e8 200 PANTHER PTHR34606:SF2 3 200 1.7E-37 T 23-04-2016 NIAKO_RS06085 25532e0699f1eab58d627063c27242e8 200 PANTHER PTHR34606 3 200 1.7E-37 T 23-04-2016 NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 Gene3D G3DSA:1.25.40.10 433 501 1.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 Gene3D G3DSA:1.25.40.10 220 329 1.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 Pfam PF07980 SusD family 285 600 2.7E-24 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 SUPERFAMILY SSF48452 392 600 4.93E-89 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 SUPERFAMILY SSF48452 16 359 4.93E-89 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS08170 8865f9ca728d597ed0dc0e41cae2cce7 600 Pfam PF14322 Starch-binding associating with outer membrane 42 240 8.1E-28 T 23-04-2016 NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 Gene3D G3DSA:1.25.40.10 306 444 6.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 Gene3D G3DSA:1.25.40.10 227 269 6.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 Pfam PF07980 SusD family 412 555 1.7E-5 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 SUPERFAMILY SSF48452 21 267 2.4E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 SUPERFAMILY SSF48452 304 452 2.4E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03560 ad7531780f0ddeaef4ab1a7c2b11c612 590 SUPERFAMILY SSF48452 514 586 2.4E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS05175 6e59085e6187d2c25f03c92caa0767de 225 SUPERFAMILY SSF55394 72 215 2.54E-6 T 23-04-2016 IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain GO:0008289 NIAKO_RS36565 19484dbc2f38df7fe54eb2e6e2510e73 134 Gene3D G3DSA:3.40.50.2300 7 128 9.7E-25 T 23-04-2016 NIAKO_RS36565 19484dbc2f38df7fe54eb2e6e2510e73 134 PANTHER PTHR26402 6 127 2.7E-18 T 23-04-2016 NIAKO_RS36565 19484dbc2f38df7fe54eb2e6e2510e73 134 SMART SM00448 6 123 9.0E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36565 19484dbc2f38df7fe54eb2e6e2510e73 134 Pfam PF00072 Response regulator receiver domain 8 123 4.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS36565 19484dbc2f38df7fe54eb2e6e2510e73 134 SUPERFAMILY SSF52172 7 128 1.85E-23 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS20060 f64d3798e0796517f6c80d8074a7c565 123 Gene3D G3DSA:3.10.180.10 7 122 1.2E-15 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS20060 f64d3798e0796517f6c80d8074a7c565 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 119 3.5E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS20060 f64d3798e0796517f6c80d8074a7c565 123 SUPERFAMILY SSF54593 4 122 4.95E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS29400 c18a1ae45bc49486236c8aa35a57cac8 139 Gene3D G3DSA:3.30.530.20 3 88 2.6E-17 T 23-04-2016 IPR023393 START-like domain NIAKO_RS29400 c18a1ae45bc49486236c8aa35a57cac8 139 PANTHER PTHR36929:SF1 6 85 6.3E-15 T 23-04-2016 NIAKO_RS29400 c18a1ae45bc49486236c8aa35a57cac8 139 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 89 1.8E-13 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS29400 c18a1ae45bc49486236c8aa35a57cac8 139 SUPERFAMILY SSF55961 3 136 1.63E-21 T 23-04-2016 NIAKO_RS29400 c18a1ae45bc49486236c8aa35a57cac8 139 PANTHER PTHR36929 6 85 6.3E-15 T 23-04-2016 NIAKO_RS20400 f8fe0f4f35171494408c283214482d5a 136 SUPERFAMILY SSF54427 6 135 2.01E-66 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS20400 f8fe0f4f35171494408c283214482d5a 136 PANTHER PTHR31757:SF0 1 136 9.2E-74 T 23-04-2016 NIAKO_RS20400 f8fe0f4f35171494408c283214482d5a 136 Pfam PF07080 Protein of unknown function (DUF1348) 6 136 3.3E-65 T 23-04-2016 IPR009783 Protein of unknown function DUF1348 NIAKO_RS20400 f8fe0f4f35171494408c283214482d5a 136 PANTHER PTHR31757 1 136 9.2E-74 T 23-04-2016 NIAKO_RS20400 f8fe0f4f35171494408c283214482d5a 136 Gene3D G3DSA:3.10.450.50 10 135 9.0E-64 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS09750 c134fdd8b8c9608c986a39b15829e781 118 Pfam PF03795 YCII-related domain 4 110 8.3E-12 T 23-04-2016 IPR005545 YCII-related NIAKO_RS09750 c134fdd8b8c9608c986a39b15829e781 118 PANTHER PTHR35174 3 111 3.2E-18 T 23-04-2016 NIAKO_RS09750 c134fdd8b8c9608c986a39b15829e781 118 Gene3D G3DSA:3.30.70.1060 1 111 2.4E-24 T 23-04-2016 NIAKO_RS09750 c134fdd8b8c9608c986a39b15829e781 118 SUPERFAMILY SSF54909 4 110 8.58E-19 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS34760 72a7d8fe8af83fce0366a680073e08d9 135 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 17 134 17.12 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 NIAKO_RS34760 72a7d8fe8af83fce0366a680073e08d9 135 PANTHER PTHR11058:SF5 21 134 1.1E-39 T 23-04-2016 NIAKO_RS34760 72a7d8fe8af83fce0366a680073e08d9 135 PANTHER PTHR11058 21 134 1.1E-39 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS34760 72a7d8fe8af83fce0366a680073e08d9 135 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 37 133 4.0E-31 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NIAKO_RS17295 15dad36df3db6df556ec2610fedf8495 429 Gene3D G3DSA:1.20.1250.20 228 416 1.0E-23 T 23-04-2016 NIAKO_RS17295 15dad36df3db6df556ec2610fedf8495 429 Gene3D G3DSA:1.20.1250.20 19 198 9.6E-19 T 23-04-2016 NIAKO_RS17295 15dad36df3db6df556ec2610fedf8495 429 SUPERFAMILY SSF103473 17 417 5.36E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS17295 15dad36df3db6df556ec2610fedf8495 429 Pfam PF07690 Major Facilitator Superfamily 236 409 3.0E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS25205 51f9ec8b214fec2d6b8c48c8f09f46d6 460 Pfam PF06439 Domain of Unknown Function (DUF1080) 26 218 1.7E-42 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS25205 51f9ec8b214fec2d6b8c48c8f09f46d6 460 Pfam PF06439 Domain of Unknown Function (DUF1080) 249 457 3.2E-43 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS00425 f2768f252a55310bbcf3cc1fa99553b1 254 PANTHER PTHR34136 1 246 9.9E-71 T 23-04-2016 NIAKO_RS00425 f2768f252a55310bbcf3cc1fa99553b1 254 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 59 228 2.5E-54 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 NIAKO_RS00425 f2768f252a55310bbcf3cc1fa99553b1 254 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 55 231 6.1E-49 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 NIAKO_RS26195 c841027b742792a63efb6740ecbc7d25 255 PANTHER PTHR34216 8 249 6.8E-34 T 23-04-2016 NIAKO_RS26195 c841027b742792a63efb6740ecbc7d25 255 Pfam PF01522 Polysaccharide deacetylase 60 184 4.2E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS26195 c841027b742792a63efb6740ecbc7d25 255 SUPERFAMILY SSF88713 24 205 8.34E-33 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NIAKO_RS26195 c841027b742792a63efb6740ecbc7d25 255 Gene3D G3DSA:3.20.20.370 35 203 1.6E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NIAKO_RS06010 34d604a7b0966523f8675ac24ee1ff97 762 Pfam PF13100 OstA-like protein 39 195 3.0E-42 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal NIAKO_RS06010 34d604a7b0966523f8675ac24ee1ff97 762 Gene3D G3DSA:2.60.450.10 42 153 4.5E-17 T 23-04-2016 NIAKO_RS06010 34d604a7b0966523f8675ac24ee1ff97 762 Gene3D G3DSA:2.60.450.10 158 211 8.7E-4 T 23-04-2016 NIAKO_RS06010 34d604a7b0966523f8675ac24ee1ff97 762 Gene3D G3DSA:2.60.450.10 493 554 3.1E-5 T 23-04-2016 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 PANTHER PTHR13833 38 251 6.4E-13 T 23-04-2016 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 Gene3D G3DSA:2.130.10.10 29 333 1.5E-50 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 Pfam PF02239 Cytochrome D1 heme domain 180 282 4.5E-8 T 23-04-2016 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 SMART SM00320 189 225 36.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 SMART SM00320 271 310 47.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 SMART SM00320 228 268 3.1 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 NIAKO_RS01305 7e45aea45bdae5124e710f02ddf8ebaa 335 SUPERFAMILY SSF50974 11 331 2.09E-55 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal NIAKO_RS33405 56057362ff0365a00a87f1a1419f109b 246 PANTHER PTHR39181 20 225 5.4E-47 T 23-04-2016 NIAKO_RS33405 56057362ff0365a00a87f1a1419f109b 246 PANTHER PTHR39181:SF1 20 225 5.4E-47 T 23-04-2016 NIAKO_RS33405 56057362ff0365a00a87f1a1419f109b 246 SUPERFAMILY SSF89550 20 223 5.49E-12 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NIAKO_RS33405 56057362ff0365a00a87f1a1419f109b 246 PIRSF PIRSF016557 20 233 1.7E-46 T 23-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 NIAKO_RS17545 ce4ecb701580798574fb1125cd872f19 361 Gene3D G3DSA:2.130.10.140 213 350 1.3E-20 T 23-04-2016 NIAKO_RS17545 ce4ecb701580798574fb1125cd872f19 361 Gene3D G3DSA:2.130.10.140 102 160 1.3E-20 T 23-04-2016 NIAKO_RS17545 ce4ecb701580798574fb1125cd872f19 361 SUPERFAMILY SSF110296 79 349 9.94E-25 T 23-04-2016 NIAKO_RS25425 9f9d0985389ac10f9558327d5fec814e 339 PANTHER PTHR19353 17 285 1.0E-24 T 23-04-2016 NIAKO_RS25425 9f9d0985389ac10f9558327d5fec814e 339 PANTHER PTHR19353:SF27 17 285 1.0E-24 T 23-04-2016 NIAKO_RS25425 9f9d0985389ac10f9558327d5fec814e 339 Pfam PF00487 Fatty acid desaturase 53 290 3.1E-26 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 PANTHER PTHR30173 1 186 3.4E-31 T 23-04-2016 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 185 1.3E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 Pfam PF04542 Sigma-70 region 2 29 96 1.1E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 Gene3D G3DSA:1.10.1740.10 8 113 2.6E-15 T 23-04-2016 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 Gene3D G3DSA:1.10.10.10 125 187 1.7E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 Pfam PF08281 Sigma-70, region 4 130 179 5.8E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 SUPERFAMILY SSF88659 113 192 1.55E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS11070 6cf609b1b26e994e357553a11f6e2f01 208 SUPERFAMILY SSF88946 6 102 3.3E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS21100 2f1097334fe007306ea32229b4457c6d 149 Pfam PF00011 Hsp20/alpha crystallin family 46 149 1.8E-23 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NIAKO_RS21100 2f1097334fe007306ea32229b4457c6d 149 SUPERFAMILY SSF49764 16 142 3.66E-32 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS21100 2f1097334fe007306ea32229b4457c6d 149 Gene3D G3DSA:2.60.40.790 14 149 1.5E-36 T 23-04-2016 IPR008978 HSP20-like chaperone NIAKO_RS21100 2f1097334fe007306ea32229b4457c6d 149 PANTHER PTHR11527 12 149 5.1E-38 T 23-04-2016 IPR031107 Small heat shock protein HSP20 NIAKO_RS21100 2f1097334fe007306ea32229b4457c6d 149 PANTHER PTHR11527:SF122 12 149 5.1E-38 T 23-04-2016 NIAKO_RS33515 586e9964a6081ca2ac6ca3fbed42674f 460 Pfam PF00144 Beta-lactamase 171 440 1.3E-34 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS33515 586e9964a6081ca2ac6ca3fbed42674f 460 SUPERFAMILY SSF56601 111 447 3.5E-73 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS33515 586e9964a6081ca2ac6ca3fbed42674f 460 PANTHER PTHR22935 68 440 3.3E-32 T 23-04-2016 NIAKO_RS33515 586e9964a6081ca2ac6ca3fbed42674f 460 Gene3D G3DSA:3.40.710.10 147 443 4.2E-44 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS08480 d53ae8d2cfbda86f98f2d7437ec19aa7 171 Pfam PF13924 Lipocalin-like domain 34 170 8.9E-29 T 23-04-2016 IPR024311 Lipocalin-like domain NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 PANTHER PTHR23200:SF41 39 237 1.3E-22 T 23-04-2016 NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 PANTHER PTHR23200 39 237 1.3E-22 T 23-04-2016 NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 Pfam PF00753 Metallo-beta-lactamase superfamily 44 207 3.0E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 Gene3D G3DSA:3.60.15.10 1 237 1.8E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 SMART SM00849 41 236 3.7E-4 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS33865 8188da349321c61195a7f0407d82b3fe 245 SUPERFAMILY SSF56281 1 196 4.6E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS05480 03bd4340455c0571278561e3dc452b15 837 SUPERFAMILY SSF56935 162 259 9.16E-9 T 23-04-2016 NIAKO_RS05480 03bd4340455c0571278561e3dc452b15 837 SUPERFAMILY SSF56935 644 695 9.16E-9 T 23-04-2016 NIAKO_RS05480 03bd4340455c0571278561e3dc452b15 837 SUPERFAMILY SSF56935 291 597 9.16E-9 T 23-04-2016 NIAKO_RS26750 9f90a4dafc73429d873a09affad051bc 266 SUPERFAMILY SSF52540 1 120 6.54E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26750 9f90a4dafc73429d873a09affad051bc 266 SUPERFAMILY SSF52540 167 259 6.54E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26750 9f90a4dafc73429d873a09affad051bc 266 Gene3D G3DSA:3.40.50.300 188 245 4.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS26750 9f90a4dafc73429d873a09affad051bc 266 Gene3D G3DSA:3.40.50.300 3 150 4.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS22325 7ea3e5f85afdec73319e09f70ca81e25 488 Pfam PF07980 SusD family 301 453 1.4E-6 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS22325 7ea3e5f85afdec73319e09f70ca81e25 488 Pfam PF14322 Starch-binding associating with outer membrane 21 226 1.5E-37 T 23-04-2016 NIAKO_RS22325 7ea3e5f85afdec73319e09f70ca81e25 488 Gene3D G3DSA:1.25.40.10 209 387 7.5E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS22325 7ea3e5f85afdec73319e09f70ca81e25 488 SUPERFAMILY SSF48452 17 478 2.02E-54 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 SUPERFAMILY SSF56281 4 298 5.05E-67 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 Hamap MF_01818 Ribonuclease BN [rbn]. 2 300 31.216 T 23-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 Gene3D G3DSA:3.60.15.10 193 301 4.7E-65 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 Gene3D G3DSA:3.60.15.10 4 155 4.7E-65 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 Pfam PF12706 Beta-lactamase superfamily domain 204 268 1.6E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 Pfam PF00753 Metallo-beta-lactamase superfamily 24 95 2.8E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 PANTHER PTHR12553 4 150 6.4E-61 T 23-04-2016 NIAKO_RS24135 a1c15a92d3d2fd689f9f62c7ce806d81 303 PANTHER PTHR12553 175 299 6.4E-61 T 23-04-2016 NIAKO_RS35535 8b3cd50e77bee1f52f4c9036ed106622 468 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 3 459 15.923 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS35535 8b3cd50e77bee1f52f4c9036ed106622 468 PANTHER PTHR22773 5 453 3.0E-130 T 23-04-2016 NIAKO_RS35535 8b3cd50e77bee1f52f4c9036ed106622 468 PANTHER PTHR22773:SF41 5 453 3.0E-130 T 23-04-2016 NIAKO_RS35535 8b3cd50e77bee1f52f4c9036ed106622 468 Pfam PF00361 Proton-conducting membrane transporter 118 403 1.0E-67 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NIAKO_RS35535 8b3cd50e77bee1f52f4c9036ed106622 468 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 454 3.6E-108 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 PANTHER PTHR40037 1 178 1.2E-19 T 23-04-2016 NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 SUPERFAMILY SSF55144 2 177 2.09E-30 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 Pfam PF13563 2'-5' RNA ligase superfamily 16 165 1.2E-19 T 23-04-2016 NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 Gene3D G3DSA:3.90.1140.10 4 177 2.9E-24 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 149 1.5E-19 T 23-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 NIAKO_RS36220 17eb82ace32596bfda7ed75196de35fe 178 PANTHER PTHR40037:SF1 1 178 1.2E-19 T 23-04-2016 NIAKO_RS23880 01a5a1098927bf04a0afa95bf6c9d870 67 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 3 64 3.8E-14 T 23-04-2016 IPR016888 Uncharacterised conserved protein UCP028498 NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 PANTHER PTHR23416 90 179 9.5E-31 T 23-04-2016 NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 PANTHER PTHR23416 7 74 9.5E-31 T 23-04-2016 NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 Gene3D G3DSA:2.160.10.10 23 166 9.5E-41 T 23-04-2016 NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 43 76 6.3E-5 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 4.7E-9 T 23-04-2016 IPR001451 Hexapeptide repeat NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NIAKO_RS00420 4088f2c1d49926aa15385de30b696594 185 SUPERFAMILY SSF51161 19 166 7.49E-39 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 Pfam PF00202 Aminotransferase class-III 10 373 1.6E-98 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 SUPERFAMILY SSF53383 8 375 1.51E-106 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 PANTHER PTHR11986 1 383 2.4E-130 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 PANTHER PTHR11986:SF79 1 383 2.4E-130 T 23-04-2016 NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 Gene3D G3DSA:3.40.640.10 47 287 4.9E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 Gene3D G3DSA:3.90.1150.10 11 46 1.9E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28025 9e9f91ed4f9d142a063ad980003bea34 384 Gene3D G3DSA:3.90.1150.10 289 374 1.9E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS35780 1d893b3c58d94aef0a31e1c764561843 537 PANTHER PTHR35148 2 518 7.4E-38 T 23-04-2016 NIAKO_RS35780 1d893b3c58d94aef0a31e1c764561843 537 SUPERFAMILY SSF48452 21 537 9.99E-88 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS35780 1d893b3c58d94aef0a31e1c764561843 537 Pfam PF12771 Starch-binding associating with outer membrane 114 520 3.8E-33 T 23-04-2016 NIAKO_RS15255 a262a8f0dceac941943d190119a4374f 201 Gene3D G3DSA:2.60.120.10 9 166 2.2E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS15255 a262a8f0dceac941943d190119a4374f 201 PANTHER PTHR24567:SF33 16 200 1.3E-20 T 23-04-2016 NIAKO_RS15255 a262a8f0dceac941943d190119a4374f 201 PANTHER PTHR24567 16 200 1.3E-20 T 23-04-2016 NIAKO_RS15255 a262a8f0dceac941943d190119a4374f 201 SUPERFAMILY SSF51206 14 156 1.22E-15 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS10020 bad42ec36d61c48544dc84b8fbc1fdba 192 Pfam PF01872 RibD C-terminal domain 2 185 2.9E-26 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS10020 bad42ec36d61c48544dc84b8fbc1fdba 192 PANTHER PTHR38011 2 190 3.5E-29 T 23-04-2016 NIAKO_RS10020 bad42ec36d61c48544dc84b8fbc1fdba 192 Gene3D G3DSA:3.40.430.10 3 190 4.8E-27 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS10020 bad42ec36d61c48544dc84b8fbc1fdba 192 SUPERFAMILY SSF53597 2 190 1.57E-29 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS10020 bad42ec36d61c48544dc84b8fbc1fdba 192 PANTHER PTHR38011:SF2 2 190 3.5E-29 T 23-04-2016 NIAKO_RS18350 91ad076d8debf839833fa7ddef890eda 257 SUPERFAMILY SSF49464 27 107 1.7E-8 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS09570 ffed84dd0a440458780f495d920464b9 234 PANTHER PTHR42208 1 230 2.7E-27 T 23-04-2016 NIAKO_RS09570 ffed84dd0a440458780f495d920464b9 234 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 205 1.1E-46 T 23-04-2016 NIAKO_RS09570 ffed84dd0a440458780f495d920464b9 234 PANTHER PTHR42208:SF1 1 230 2.7E-27 T 23-04-2016 NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 SUPERFAMILY SSF48452 18 543 2.4E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 SUPERFAMILY SSF48452 594 626 2.4E-90 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 Gene3D G3DSA:1.25.40.10 424 516 2.0E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 Gene3D G3DSA:1.25.40.10 210 354 2.0E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 Pfam PF07980 SusD family 326 626 1.7E-37 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS14620 c44b0a4f71034aacf2811d3618f03ff3 626 Pfam PF14322 Starch-binding associating with outer membrane 23 225 3.4E-21 T 23-04-2016 NIAKO_RS27325 c929bf7ec2c1c756d24e3e980e6aec72 252 PANTHER PTHR30576 35 227 2.6E-80 T 23-04-2016 NIAKO_RS27325 c929bf7ec2c1c756d24e3e980e6aec72 252 PANTHER PTHR30576:SF0 35 227 2.6E-80 T 23-04-2016 NIAKO_RS27325 c929bf7ec2c1c756d24e3e980e6aec72 252 Pfam PF02397 Bacterial sugar transferase 37 221 3.9E-53 T 23-04-2016 IPR003362 Bacterial sugar transferase NIAKO_RS34650 70e7b6470a98d011859c525357597754 180 PANTHER PTHR24567 3 173 1.7E-17 T 23-04-2016 NIAKO_RS34650 70e7b6470a98d011859c525357597754 180 SUPERFAMILY SSF51206 3 132 6.42E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS34650 70e7b6470a98d011859c525357597754 180 PANTHER PTHR24567:SF33 3 173 1.7E-17 T 23-04-2016 NIAKO_RS34650 70e7b6470a98d011859c525357597754 180 Gene3D G3DSA:2.60.120.10 2 142 5.3E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS34650 70e7b6470a98d011859c525357597754 180 Pfam PF00027 Cyclic nucleotide-binding domain 20 106 2.1E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 530 579 4.1E-7 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 Gene3D G3DSA:3.40.50.300 75 140 6.4E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 Gene3D G3DSA:3.40.50.300 445 582 6.4E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 Gene3D G3DSA:3.40.50.300 250 321 6.4E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 SUPERFAMILY SSF52540 476 589 1.24E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19025 360fbcd08046dd7d1d331c2520fe566e 711 SUPERFAMILY SSF52540 75 154 1.24E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 Pfam PF02563 Polysaccharide biosynthesis/export protein 60 158 1.3E-15 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 Gene3D G3DSA:3.10.560.10 160 242 1.1E-16 T 23-04-2016 NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 PANTHER PTHR33619 110 241 3.3E-37 T 23-04-2016 NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 PANTHER PTHR33619 60 80 3.3E-37 T 23-04-2016 NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 Gene3D G3DSA:3.30.1950.10 64 159 3.4E-16 T 23-04-2016 NIAKO_RS33205 59f0cafbdb1a79d1a7f5c2d5c68b5eca 278 Pfam PF10531 SLBB domain 163 208 2.2E-7 T 23-04-2016 IPR019554 Soluble ligand binding domain NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 Gene3D G3DSA:3.30.565.10 104 250 8.5E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 SUPERFAMILY SSF47384 13 94 2.35E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 SUPERFAMILY SSF55874 86 250 7.2E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 212 230 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 177 191 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 236 249 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 142 250 7.0E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 Gene3D G3DSA:1.10.287.130 22 89 6.0E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 SMART SM00387 141 251 5.9E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS10150 3d48dcf3f317c1391056e9cb1238e4d2 251 PANTHER PTHR24423 7 251 4.5E-43 T 23-04-2016 NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 SUPERFAMILY SSF81901 37 135 1.31E-20 T 23-04-2016 NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 Gene3D G3DSA:1.25.40.10 24 133 3.3E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 SMART SM00671 90 125 8.9E-11 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 SMART SM00671 49 89 5.4 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 PANTHER PTHR11102 39 127 2.9E-19 T 23-04-2016 NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 Pfam PF08238 Sel1 repeat 49 89 1.5E-5 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS36460 d119270341f175332520877a0aa430c7 141 Pfam PF08238 Sel1 repeat 90 125 4.6E-8 T 23-04-2016 IPR006597 Sel1-like repeat NIAKO_RS31875 5c46c5d81825c8c95618d56e898ab8fc 224 Gene3D G3DSA:1.20.120.80 19 223 7.9E-55 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 NIAKO_RS31875 5c46c5d81825c8c95618d56e898ab8fc 224 PANTHER PTHR11403 26 223 1.9E-39 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 NIAKO_RS31875 5c46c5d81825c8c95618d56e898ab8fc 224 SUPERFAMILY SSF81452 13 223 1.44E-45 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NIAKO_RS31875 5c46c5d81825c8c95618d56e898ab8fc 224 Pfam PF00510 Cytochrome c oxidase subunit III 21 223 3.1E-14 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NIAKO_RS32610 22ecb51dda69b302b1566a87ab398267 291 PANTHER PTHR30636 1 291 9.1E-70 T 23-04-2016 NIAKO_RS32610 22ecb51dda69b302b1566a87ab398267 291 Pfam PF08340 Domain of unknown function (DUF1732) 206 290 3.6E-27 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 NIAKO_RS32610 22ecb51dda69b302b1566a87ab398267 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 290 3.3E-54 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 NIAKO_RS32610 22ecb51dda69b302b1566a87ab398267 291 Pfam PF03755 YicC-like family, N-terminal region 2 154 7.1E-35 T 23-04-2016 IPR013527 YicC-like, N-terminal NIAKO_RS03120 0eae71cc111a8289588236b339032bde 333 Pfam PF00149 Calcineurin-like phosphoesterase 72 264 6.1E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS03120 0eae71cc111a8289588236b339032bde 333 PANTHER PTHR22953 67 263 1.0E-17 T 23-04-2016 NIAKO_RS03120 0eae71cc111a8289588236b339032bde 333 SUPERFAMILY SSF56300 71 291 9.3E-43 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS03120 0eae71cc111a8289588236b339032bde 333 Gene3D G3DSA:3.60.21.10 70 291 1.6E-32 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS03920 3c54915c7ed96feb94ece5291e320146 172 PIRSF PIRSF024492 2 168 1.4E-42 T 23-04-2016 IPR014519 Uncharacterised conserved protein UCP024492 NIAKO_RS03920 3c54915c7ed96feb94ece5291e320146 172 Pfam PF04343 Protein of unknown function, DUF488 16 129 7.0E-23 T 23-04-2016 IPR007438 Protein of unknown function DUF488 NIAKO_RS03920 3c54915c7ed96feb94ece5291e320146 172 PANTHER PTHR39337:SF1 6 154 3.9E-31 T 23-04-2016 NIAKO_RS03920 3c54915c7ed96feb94ece5291e320146 172 PANTHER PTHR39337 6 154 3.9E-31 T 23-04-2016 NIAKO_RS20440 45e05d226bea1a24d01f95bc9c4ef767 489 SUPERFAMILY SSF48452 18 487 6.7E-111 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20440 45e05d226bea1a24d01f95bc9c4ef767 489 Pfam PF07980 SusD family 339 487 7.5E-30 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20440 45e05d226bea1a24d01f95bc9c4ef767 489 Gene3D G3DSA:1.25.40.10 210 434 6.1E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20440 45e05d226bea1a24d01f95bc9c4ef767 489 Pfam PF14322 Starch-binding associating with outer membrane 89 227 2.7E-20 T 23-04-2016 NIAKO_RS27350 0dc9167442170170932f725c42c6a8fd 238 PANTHER PTHR11624 4 230 9.1E-59 T 23-04-2016 IPR033247 Transketolase family NIAKO_RS27350 0dc9167442170170932f725c42c6a8fd 238 Gene3D G3DSA:3.40.50.970 1 233 2.5E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS27350 0dc9167442170170932f725c42c6a8fd 238 PANTHER PTHR11624:SF2 4 230 9.1E-59 T 23-04-2016 NIAKO_RS27350 0dc9167442170170932f725c42c6a8fd 238 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 232 2.5E-31 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NIAKO_RS27350 0dc9167442170170932f725c42c6a8fd 238 SUPERFAMILY SSF52518 3 231 8.3E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 Pfam PF04773 FecR protein 200 255 1.8E-9 T 23-04-2016 IPR006860 FecR protein NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 PANTHER PTHR30273:SF2 202 432 1.3E-55 T 23-04-2016 NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 PANTHER PTHR30273:SF2 6 133 1.3E-55 T 23-04-2016 NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 PANTHER PTHR30273 202 432 1.3E-55 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 PANTHER PTHR30273 6 133 1.3E-55 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19470 fe4e20cf949a9fc035a7515c14b43efe 436 Pfam PF16344 Domain of unknown function (DUF4974) 331 432 6.2E-18 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS33640 e9e165aceba50d46fbbb06ff0dc22e0d 97 Pfam PF16804 Domain of unknown function (DUF5071) 6 89 1.4E-28 T 23-04-2016 IPR031837 Domain of unknown function DUF5071 NIAKO_RS36260 67742e2878326ad5342fc667702274a8 490 PANTHER PTHR32438 160 465 7.1E-27 T 23-04-2016 NIAKO_RS36260 67742e2878326ad5342fc667702274a8 490 SUPERFAMILY SSF50998 149 468 6.44E-7 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS08275 ad0fb9aadb768cc54d10ed88768b9a2f 158 SUPERFAMILY SSF55961 3 148 3.67E-6 T 23-04-2016 NIAKO_RS08275 ad0fb9aadb768cc54d10ed88768b9a2f 158 Gene3D G3DSA:3.30.530.20 41 122 5.4E-4 T 23-04-2016 IPR023393 START-like domain NIAKO_RS07485 248dd8be573362393c3ec1882959be1a 341 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 14 320 2.7E-30 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS14325 95cc7f4faf8f0c051ba4305caa6b9634 281 PANTHER PTHR23200 24 263 1.6E-30 T 23-04-2016 NIAKO_RS14325 95cc7f4faf8f0c051ba4305caa6b9634 281 Gene3D G3DSA:3.60.15.10 58 265 1.2E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS14325 95cc7f4faf8f0c051ba4305caa6b9634 281 SMART SM00849 57 262 7.6E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS14325 95cc7f4faf8f0c051ba4305caa6b9634 281 SUPERFAMILY SSF56281 36 269 8.65E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS14325 95cc7f4faf8f0c051ba4305caa6b9634 281 Pfam PF00753 Metallo-beta-lactamase superfamily 60 131 2.3E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 PANTHER PTHR32332:SF12 2 76 4.9E-90 T 23-04-2016 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 PANTHER PTHR32332:SF12 114 359 4.9E-90 T 23-04-2016 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 Gene3D G3DSA:3.20.20.70 4 76 2.0E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 Gene3D G3DSA:3.20.20.70 108 331 2.0E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 SUPERFAMILY SSF51412 11 350 3.36E-53 T 23-04-2016 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 PANTHER PTHR32332 2 76 4.9E-90 T 23-04-2016 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 PANTHER PTHR32332 114 359 4.9E-90 T 23-04-2016 NIAKO_RS33580 6a0442dce98036788ae8d4dcc6ea4d30 362 Pfam PF03060 Nitronate monooxygenase 6 351 2.3E-69 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NIAKO_RS20295 4917486528c0e6b7416d2e105cbe3cc9 571 PIRSF PIRSF001294 1 571 2.3E-210 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NIAKO_RS20295 4917486528c0e6b7416d2e105cbe3cc9 571 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 9 571 2.2E-174 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NIAKO_RS20295 4917486528c0e6b7416d2e105cbe3cc9 571 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 570 30.169 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NIAKO_RS20295 4917486528c0e6b7416d2e105cbe3cc9 571 PANTHER PTHR30607 1 571 7.0E-251 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NIAKO_RS20295 4917486528c0e6b7416d2e105cbe3cc9 571 Pfam PF03814 Potassium-transporting ATPase A subunit 10 568 6.8E-223 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 SMART SM00382 35 196 2.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 Gene3D G3DSA:3.40.50.300 32 221 6.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 PANTHER PTHR22908 6 276 1.2E-77 T 23-04-2016 NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 SUPERFAMILY SSF52540 32 77 3.68E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 SUPERFAMILY SSF52540 112 276 3.68E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 Pfam PF07728 AAA domain (dynein-related subfamily) 39 190 6.5E-11 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NIAKO_RS03875 87403d1be91ec9c7e814000dc61102d5 297 PANTHER PTHR22908:SF67 6 276 1.2E-77 T 23-04-2016 NIAKO_RS20795 8e4f2ecb456d27c1d3b0467fb21e3b13 176 Gene3D G3DSA:3.40.630.30 19 151 1.1E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS20795 8e4f2ecb456d27c1d3b0467fb21e3b13 176 SUPERFAMILY SSF55729 62 172 8.93E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS32790 20b708e9e59331dfd6585df47b055798 286 Pfam PF13568 Outer membrane protein beta-barrel domain 112 254 4.8E-12 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS17100 98d0131ec9a666d1eb3d84031a359eae 454 Pfam PF01139 tRNA-splicing ligase RtcB 185 438 2.9E-34 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS17100 98d0131ec9a666d1eb3d84031a359eae 454 SUPERFAMILY SSF103365 70 438 2.22E-62 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS17100 98d0131ec9a666d1eb3d84031a359eae 454 PANTHER PTHR11118:SF3 20 439 1.7E-33 T 23-04-2016 NIAKO_RS17100 98d0131ec9a666d1eb3d84031a359eae 454 PANTHER PTHR11118 20 439 1.7E-33 T 23-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 NIAKO_RS06355 e80fc0c4c725a280932a9fbbdb61a49d 373 SUPERFAMILY SSF55729 140 350 9.95E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS06355 e80fc0c4c725a280932a9fbbdb61a49d 373 SUPERFAMILY SSF55729 5 112 9.95E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS06355 e80fc0c4c725a280932a9fbbdb61a49d 373 PANTHER PTHR41368 1 373 3.4E-107 T 23-04-2016 NIAKO_RS06355 e80fc0c4c725a280932a9fbbdb61a49d 373 Gene3D G3DSA:3.40.630.30 198 340 1.7E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 Gene3D G3DSA:1.20.1290.10 11 150 3.9E-54 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 93 2.1E-21 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 28 77 2.6E-17 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 PANTHER PTHR34846 14 142 3.1E-15 T 23-04-2016 NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 SUPERFAMILY SSF69118 13 145 1.3E-45 T 23-04-2016 IPR029032 AhpD-like NIAKO_RS35480 7887a3567c362eef24efe53b5738ee11 153 PANTHER PTHR34846:SF2 14 142 3.1E-15 T 23-04-2016 NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 Pfam PF13091 PLD-like domain 221 345 1.4E-14 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 Pfam PF13091 PLD-like domain 417 565 1.1E-6 T 23-04-2016 IPR025202 Phospholipase D-like domain NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 Gene3D G3DSA:3.30.870.10 489 579 4.6E-12 T 23-04-2016 NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 Gene3D G3DSA:3.30.870.10 204 351 3.6E-14 T 23-04-2016 NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 SUPERFAMILY SSF56024 490 578 1.19E-6 T 23-04-2016 NIAKO_RS25370 6d0d1581f0289f5e9aa46bee24949613 702 SUPERFAMILY SSF56024 211 349 9.64E-11 T 23-04-2016 NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 SUPERFAMILY SSF51126 12 405 2.35E-24 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 965 1042 8.7E-15 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 Pfam PF13585 C-terminal domain of CHU protein family 965 1049 2.9E-19 T 23-04-2016 NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 Gene3D G3DSA:2.160.20.10 12 406 2.3E-29 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 PANTHER PTHR34720 41 157 4.1E-12 T 23-04-2016 NIAKO_RS36345 e6fecb5ea2ae9a69f3c3081ab7e5ba57 1052 PANTHER PTHR34720:SF1 41 157 4.1E-12 T 23-04-2016 NIAKO_RS05185 b3178b3b12127a0a8f3fc27a88409c44 357 SUPERFAMILY SSF53822 35 333 4.32E-19 T 23-04-2016 IPR028082 Periplasmic binding protein-like I NIAKO_RS05185 b3178b3b12127a0a8f3fc27a88409c44 357 Pfam PF13458 Periplasmic binding protein 35 314 1.1E-16 T 23-04-2016 IPR028081 Leucine-binding protein domain NIAKO_RS05185 b3178b3b12127a0a8f3fc27a88409c44 357 Gene3D G3DSA:3.40.50.2300 37 175 7.8E-4 T 23-04-2016 NIAKO_RS23360 c57be797195d3dc84746a07527311229 172 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NIAKO_RS23360 c57be797195d3dc84746a07527311229 172 Pfam PF00578 AhpC/TSA family 40 160 3.6E-8 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS23360 c57be797195d3dc84746a07527311229 172 Gene3D G3DSA:3.40.30.10 9 169 4.0E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS23360 c57be797195d3dc84746a07527311229 172 SUPERFAMILY SSF52833 40 171 1.04E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18190 70eed7a9cbff8ddff4686ebf21710501 338 Pfam PF04773 FecR protein 136 224 2.0E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS18190 70eed7a9cbff8ddff4686ebf21710501 338 PANTHER PTHR30273 1 337 3.2E-55 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS18190 70eed7a9cbff8ddff4686ebf21710501 338 PIRSF PIRSF018266 2 338 4.8E-57 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS18190 70eed7a9cbff8ddff4686ebf21710501 338 PANTHER PTHR30273:SF2 1 337 3.2E-55 T 23-04-2016 NIAKO_RS18190 70eed7a9cbff8ddff4686ebf21710501 338 Pfam PF16344 Domain of unknown function (DUF4974) 236 334 8.8E-17 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 PANTHER PTHR33603 1 156 4.9E-60 T 23-04-2016 NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 PANTHER PTHR33603:SF1 1 156 4.9E-60 T 23-04-2016 NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 PIRSF PIRSF004505 1 156 6.5E-49 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 156 26.526 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 SUPERFAMILY SSF75217 1 154 2.65E-46 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 155 8.0E-51 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NIAKO_RS19505 ec2d6c4cd00f47b35cb1ecf7ea634154 157 Gene3D G3DSA:3.40.1280.10 1 156 4.1E-52 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIAKO_RS27235 a2be5193ddc8ba860da80a46b175bce4 279 Pfam PF04134 Protein of unknown function, DUF393 8 112 1.9E-6 T 23-04-2016 IPR007263 Protein of unknown function DUF393 NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 SUPERFAMILY SSF54909 1 104 3.75E-37 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 PANTHER PTHR34389 1 103 2.2E-40 T 23-04-2016 NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 30.382 T 23-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 2.0E-37 T 23-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 1.6E-28 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 NIAKO_RS17995 a66773f0b27063e0df2f81b102db4fa7 104 PANTHER PTHR34389:SF2 1 103 2.2E-40 T 23-04-2016 NIAKO_RS24005 d5901fc504a17a9028dc153507d1ee96 184 Pfam PF10543 ORF6N domain 9 105 2.2E-33 T 23-04-2016 IPR018873 KilA-N, DNA-binding domain NIAKO_RS06570 ff65fd0cd43c945fa84d68cfe3e0074a 256 SUPERFAMILY SSF48613 90 254 1.25E-9 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS06570 ff65fd0cd43c945fa84d68cfe3e0074a 256 Gene3D G3DSA:1.20.910.10 3 254 1.1E-6 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS06570 ff65fd0cd43c945fa84d68cfe3e0074a 256 Pfam PF11251 Protein of unknown function (DUF3050) 19 250 8.2E-99 T 23-04-2016 IPR024423 Protein of unknown function DUF3050 NIAKO_RS08835 f146327afc33fe5fcb4313dc7cfb82c1 433 SUPERFAMILY SSF48208 46 415 2.13E-29 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS08835 f146327afc33fe5fcb4313dc7cfb82c1 433 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 70 318 3.8E-9 T 23-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain NIAKO_RS08835 f146327afc33fe5fcb4313dc7cfb82c1 433 Gene3D G3DSA:1.50.10.10 46 382 6.3E-11 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS20500 68684a3280ddf2d0aa8a8f70880c4718 211 Pfam PF03458 UPF0126 domain 93 167 2.4E-24 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 NIAKO_RS20500 68684a3280ddf2d0aa8a8f70880c4718 211 Pfam PF03458 UPF0126 domain 8 81 1.8E-19 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 NIAKO_RS20500 68684a3280ddf2d0aa8a8f70880c4718 211 PANTHER PTHR30506 1 211 1.4E-75 T 23-04-2016 NIAKO_RS20500 68684a3280ddf2d0aa8a8f70880c4718 211 PANTHER PTHR30506:SF3 1 211 1.4E-75 T 23-04-2016 NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 PANTHER PTHR18901 11 189 4.8E-40 T 23-04-2016 NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 Gene3D G3DSA:3.40.50.1000 93 190 2.9E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 Gene3D G3DSA:3.40.50.1000 8 24 2.9E-34 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 189 5.1E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 9.1E-25 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS06305 5fd22d32626d2bdcb599bbb24d8c65fd 194 SUPERFAMILY SSF56784 10 191 6.56E-41 T 23-04-2016 IPR023214 HAD-like domain NIAKO_RS05540 43d5ffcaf1cdf13b069c5bf6b886aede 77 Gene3D G3DSA:3.30.450.20 10 61 2.1E-5 T 23-04-2016 NIAKO_RS05540 43d5ffcaf1cdf13b069c5bf6b886aede 77 SUPERFAMILY SSF55785 12 60 2.97E-5 T 23-04-2016 IPR000014 PAS domain NIAKO_RS28275 c93c3763a836f573152aed03b9fb58a8 765 SUPERFAMILY SSF63829 388 659 2.81E-9 T 23-04-2016 NIAKO_RS28275 c93c3763a836f573152aed03b9fb58a8 765 Pfam PF07494 Two component regulator propeller 536 558 7.1E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS28275 c93c3763a836f573152aed03b9fb58a8 765 Gene3D G3DSA:2.120.10.30 538 558 2.8E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS28275 c93c3763a836f573152aed03b9fb58a8 765 Gene3D G3DSA:2.120.10.30 385 503 2.8E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS28275 c93c3763a836f573152aed03b9fb58a8 765 Gene3D G3DSA:2.120.10.30 594 748 2.8E-9 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS27140 72a7e9c8a061139ec3e67f87498c86b8 387 SUPERFAMILY SSF55729 141 274 8.26E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS27140 72a7e9c8a061139ec3e67f87498c86b8 387 SUPERFAMILY SSF55729 46 113 8.26E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS27140 72a7e9c8a061139ec3e67f87498c86b8 387 SUPERFAMILY SSF55729 301 318 8.26E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS27140 72a7e9c8a061139ec3e67f87498c86b8 387 PANTHER PTHR41368 1 374 1.4E-59 T 23-04-2016 NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 SUPERFAMILY SSF52540 1 107 5.32E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 SUPERFAMILY SSF52540 325 453 5.32E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 Pfam PF13175 AAA ATPase domain 1 412 8.3E-61 T 23-04-2016 NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 Gene3D G3DSA:3.40.50.300 1 106 3.0E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 Gene3D G3DSA:3.40.50.300 194 284 3.0E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS05325 0a527873d102d49784ae748cdb15a82f 667 Gene3D G3DSA:3.40.50.300 329 446 3.0E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PRINTS PR00762 Chloride channel signature 342 362 5.2E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PRINTS PR00762 Chloride channel signature 87 104 5.2E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PRINTS PR00762 Chloride channel signature 373 389 5.2E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PRINTS PR00762 Chloride channel signature 177 196 5.2E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 SUPERFAMILY SSF81340 16 436 3.79E-82 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PANTHER PTHR11689 36 434 7.3E-44 T 23-04-2016 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 PANTHER PTHR11689:SF14 36 434 7.3E-44 T 23-04-2016 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 Pfam PF00654 Voltage gated chloride channel 75 422 1.2E-71 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 NIAKO_RS09125 7b88ea9cebf174494f011bbd74888336 464 Gene3D G3DSA:1.10.3080.10 34 434 9.3E-66 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 NIAKO_RS23715 fd46a68643dd8f7848de4e91dfe9e684 158 Gene3D G3DSA:3.30.530.20 7 155 1.7E-25 T 23-04-2016 IPR023393 START-like domain NIAKO_RS23715 fd46a68643dd8f7848de4e91dfe9e684 158 SUPERFAMILY SSF55961 9 154 9.62E-26 T 23-04-2016 NIAKO_RS23715 fd46a68643dd8f7848de4e91dfe9e684 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 152 1.3E-17 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS12355 fe19de168405adc1df69fb0b38ab8f93 75 Pfam PF04397 LytTr DNA-binding domain 2 52 8.6E-6 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 NIAKO_RS12355 fe19de168405adc1df69fb0b38ab8f93 75 Gene3D G3DSA:2.40.50.40 2 21 1.7E-4 T 23-04-2016 NIAKO_RS32300 8fc3d219cdfe5e186bf98aaec888a000 220 PANTHER PTHR12863 9 220 7.8E-45 T 23-04-2016 NIAKO_RS32300 8fc3d219cdfe5e186bf98aaec888a000 220 PANTHER PTHR12863:SF1 9 220 7.8E-45 T 23-04-2016 NIAKO_RS32300 8fc3d219cdfe5e186bf98aaec888a000 220 Pfam PF04116 Fatty acid hydroxylase superfamily 62 199 7.6E-21 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS18860 7de241da70f2008a68e504c67ca451e0 97 SUPERFAMILY SSF54909 1 95 7.15E-25 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS18860 7de241da70f2008a68e504c67ca451e0 97 Gene3D G3DSA:3.30.70.900 1 91 4.8E-35 T 23-04-2016 NIAKO_RS00085 4a0996e921e9deea91e647cc46f76bf2 432 SUPERFAMILY SSF51445 3 364 3.01E-43 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS00085 4a0996e921e9deea91e647cc46f76bf2 432 Pfam PF00232 Glycosyl hydrolase family 1 27 363 2.4E-8 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 NIAKO_RS00085 4a0996e921e9deea91e647cc46f76bf2 432 Gene3D G3DSA:3.20.20.80 25 368 8.0E-27 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03610 563023f3680347926a4fbc00d2284a70 399 SUPERFAMILY SSF82171 65 398 1.96E-21 T 23-04-2016 NIAKO_RS03610 563023f3680347926a4fbc00d2284a70 399 Pfam PF14583 Oligogalacturonate lyase 32 396 2.5E-23 T 23-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 NIAKO_RS03610 563023f3680347926a4fbc00d2284a70 399 Gene3D G3DSA:2.130.10.10 32 398 1.7E-59 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS29835 27295639fc51385d6268c81882ca894a 488 Pfam PF11855 Protein of unknown function (DUF3375) 10 460 1.0E-112 T 23-04-2016 IPR021804 Protein of unknown function DUF3375 NIAKO_RS16905 46ed91963d13e5467fbba8d09d4efce3 188 Pfam PF14066 Protein of unknown function (DUF4256) 16 188 8.4E-93 T 23-04-2016 IPR025352 Protein of unknown function DUF4256 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 Pfam PF02638 Glycosyl hydrolase-like 10 25 328 5.8E-69 T 23-04-2016 IPR003790 Glycosyl hydrolase-like 10 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 PANTHER PTHR30032 218 519 2.4E-83 T 23-04-2016 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 PANTHER PTHR30032 24 198 2.4E-83 T 23-04-2016 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 SUPERFAMILY SSF51445 54 324 9.06E-22 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 PANTHER PTHR30032:SF2 218 519 2.4E-83 T 23-04-2016 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 PANTHER PTHR30032:SF2 24 198 2.4E-83 T 23-04-2016 NIAKO_RS30715 2d9d79559471f0452af29e65a2616315 521 Gene3D G3DSA:3.20.20.80 79 203 3.7E-4 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 Pfam PF07980 SusD family 261 519 2.3E-46 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 Gene3D G3DSA:1.25.40.10 372 464 3.2E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 Gene3D G3DSA:1.25.40.10 198 276 3.2E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 Gene3D G3DSA:1.25.40.10 319 320 3.2E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 Pfam PF14322 Starch-binding associating with outer membrane 81 217 7.1E-22 T 23-04-2016 NIAKO_RS06400 c6411beca6e014381ddda7c527f4d2ac 519 SUPERFAMILY SSF48452 17 519 1.45E-119 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11430 7b5e6600ed155486790f1abd970f04d0 361 SUPERFAMILY SSF158745 14 359 5.1E-10 T 23-04-2016 NIAKO_RS28905 c7471f0d4f99b8ef05ae718fc7b226f5 221 SUPERFAMILY SSF51735 2 211 2.82E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28905 c7471f0d4f99b8ef05ae718fc7b226f5 221 Gene3D G3DSA:3.40.50.720 2 218 4.7E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS28905 c7471f0d4f99b8ef05ae718fc7b226f5 221 PANTHER PTHR14097 6 218 6.0E-43 T 23-04-2016 NIAKO_RS28905 c7471f0d4f99b8ef05ae718fc7b226f5 221 PANTHER PTHR14097:SF8 6 218 6.0E-43 T 23-04-2016 NIAKO_RS14610 0bcca4946c8689c87a72e65d660f7f70 357 Pfam PF16344 Domain of unknown function (DUF4974) 280 348 4.2E-11 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS14610 0bcca4946c8689c87a72e65d660f7f70 357 PANTHER PTHR30273:SF2 5 354 1.1E-33 T 23-04-2016 NIAKO_RS14610 0bcca4946c8689c87a72e65d660f7f70 357 PANTHER PTHR30273 5 354 1.1E-33 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS14610 0bcca4946c8689c87a72e65d660f7f70 357 Pfam PF04773 FecR protein 124 216 6.8E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS01115 5cf259c4505e6eb5117cffa915c76428 103 SUPERFAMILY SSF141066 6 102 3.79E-17 T 23-04-2016 IPR018990 Proteinase inhibitor I42, chagasin NIAKO_RS01115 5cf259c4505e6eb5117cffa915c76428 103 Pfam PF09394 Chagasin family peptidase inhibitor I42 17 98 8.1E-18 T 23-04-2016 IPR018990 Proteinase inhibitor I42, chagasin NIAKO_RS23035 38506642aab7b963e562c344b2919789 98 Pfam PF12779 YXWGXW repeat (2 copies) 63 83 0.01 T 23-04-2016 IPR024447 YXWGXW repeat NIAKO_RS23035 38506642aab7b963e562c344b2919789 98 Pfam PF12779 YXWGXW repeat (2 copies) 76 96 1.1E-5 T 23-04-2016 IPR024447 YXWGXW repeat NIAKO_RS23035 38506642aab7b963e562c344b2919789 98 Pfam PF12779 YXWGXW repeat (2 copies) 47 69 0.06 T 23-04-2016 IPR024447 YXWGXW repeat NIAKO_RS07665 d265de7f21a2bb120d46d4405006e2e4 213 Pfam PF16011 Carbohydrate-binding family 9 28 212 1.5E-69 T 23-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 NIAKO_RS07665 d265de7f21a2bb120d46d4405006e2e4 213 SUPERFAMILY SSF49344 28 212 2.35E-8 T 23-04-2016 NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 367 6.6E-82 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 PANTHER PTHR30158 1 367 7.3E-87 T 23-04-2016 NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 287 3.6E-19 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 Gene3D G3DSA:2.40.50.100 171 203 5.5E-21 T 23-04-2016 NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 Gene3D G3DSA:2.40.50.100 62 96 5.5E-21 T 23-04-2016 NIAKO_RS19795 ace3fe4b4e24069945ae9aecfe662edd 380 SUPERFAMILY SSF111369 50 291 1.31E-53 T 23-04-2016 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 Gene3D G3DSA:1.10.10.60 204 255 2.4E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 Pfam PF12833 Helix-turn-helix domain 173 252 4.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 SUPERFAMILY SSF46689 204 254 3.18E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 PANTHER PTHR11019:SF126 162 259 6.4E-17 T 23-04-2016 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 SMART SM00342 167 251 3.6E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 PANTHER PTHR11019 162 259 6.4E-17 T 23-04-2016 NIAKO_RS29380 c6ac13c318d1c1eae44c7585e462c882 270 Gene3D G3DSA:1.10.10.60 162 198 1.2E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 PANTHER PTHR35530 1 70 5.5E-17 T 23-04-2016 NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 3.5E-22 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 PANTHER PTHR35530:SF1 1 70 5.5E-17 T 23-04-2016 NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 SUPERFAMILY SSF55331 2 67 2.11E-20 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 Pfam PF01361 Tautomerase enzyme 2 60 6.8E-19 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NIAKO_RS33565 96bcf87b920a7014a0b4b8147b9d6398 72 Gene3D G3DSA:3.30.429.20 2 63 5.8E-23 T 23-04-2016 NIAKO_RS06015 c752880495fe861baeeed673a3fbd036 322 PANTHER PTHR33371 1 305 5.1E-16 T 23-04-2016 NIAKO_RS06015 c752880495fe861baeeed673a3fbd036 322 PANTHER PTHR33371:SF4 1 305 5.1E-16 T 23-04-2016 NIAKO_RS06015 c752880495fe861baeeed673a3fbd036 322 Pfam PF02470 MlaD protein 34 101 9.4E-10 T 23-04-2016 IPR003399 Mce/MlaD NIAKO_RS11050 ba14f545b06f866368bf61d89a78db97 250 Pfam PF16132 Domain of unknown function (DUF4843) 29 199 3.2E-30 T 23-04-2016 IPR032299 Protein of unknown function DUF4843 NIAKO_RS20590 34af71a2dbc22c56813ce345001120c9 278 Pfam PF01925 Sulfite exporter TauE/SafE 11 269 4.1E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS20590 34af71a2dbc22c56813ce345001120c9 278 PANTHER PTHR30269:SF23 2 278 1.7E-102 T 23-04-2016 NIAKO_RS20590 34af71a2dbc22c56813ce345001120c9 278 PANTHER PTHR30269 2 278 1.7E-102 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS33755 0ad187f71ff6ea7870dc3f17aa013327 529 Pfam PF12080 GldM C-terminal domain 347 514 1.2E-36 T 23-04-2016 IPR022719 Gliding motility-associated protein GldM, C-terminal NIAKO_RS33755 0ad187f71ff6ea7870dc3f17aa013327 529 Pfam PF12081 GldM N-terminal domain 30 240 6.1E-60 T 23-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal NIAKO_RS33755 0ad187f71ff6ea7870dc3f17aa013327 529 TIGRFAM TIGR03517 GldM_gliding: gliding motility-associated protein GldM 6 524 1.2E-88 T 23-04-2016 IPR019859 Gliding motility-associated protein GldM NIAKO_RS13870 74c8009d2b9937f0a37a86caceeaddb4 418 Pfam PF02698 DUF218 domain 255 356 2.4E-9 T 23-04-2016 IPR003848 Domain of unknown function DUF218 NIAKO_RS13870 74c8009d2b9937f0a37a86caceeaddb4 418 Gene3D G3DSA:3.40.50.620 250 362 1.5E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS30755 fb3c59421be09732f1eeb9c40e8eab6d 141 SUPERFAMILY SSF54427 23 141 2.18E-28 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS30755 fb3c59421be09732f1eeb9c40e8eab6d 141 Gene3D G3DSA:3.10.450.50 22 141 2.4E-45 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS06585 034627360f5d45c6335ae5a6fcbf5faa 433 SUPERFAMILY SSF51126 37 421 5.79E-73 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS06585 034627360f5d45c6335ae5a6fcbf5faa 433 PANTHER PTHR31339 30 424 5.0E-76 T 23-04-2016 NIAKO_RS06585 034627360f5d45c6335ae5a6fcbf5faa 433 Gene3D G3DSA:2.160.20.10 27 407 1.2E-86 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS06585 034627360f5d45c6335ae5a6fcbf5faa 433 Pfam PF00295 Glycosyl hydrolases family 28 57 330 2.2E-22 T 23-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 NIAKO_RS06585 034627360f5d45c6335ae5a6fcbf5faa 433 PANTHER PTHR31339:SF0 30 424 5.0E-76 T 23-04-2016 NIAKO_RS10065 f16bf82a6dfc1d019f8e88b65ecf0397 697 Gene3D G3DSA:2.60.40.10 518 607 1.4E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS10065 f16bf82a6dfc1d019f8e88b65ecf0397 697 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 619 695 4.3E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36335 0acca9d5a2e750bb1f5b3cdbe4f7e7a1 563 Pfam PF13688 Metallo-peptidase family M12 201 375 8.1E-12 T 23-04-2016 NIAKO_RS36335 0acca9d5a2e750bb1f5b3cdbe4f7e7a1 563 SUPERFAMILY SSF55486 211 380 2.1E-9 T 23-04-2016 NIAKO_RS36335 0acca9d5a2e750bb1f5b3cdbe4f7e7a1 563 Gene3D G3DSA:3.40.390.10 319 373 2.7E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NIAKO_RS36335 0acca9d5a2e750bb1f5b3cdbe4f7e7a1 563 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 487 562 9.7E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 SUPERFAMILY SSF53474 8 284 6.32E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 PANTHER PTHR10992 216 285 4.6E-41 T 23-04-2016 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 PANTHER PTHR10992 11 200 4.6E-41 T 23-04-2016 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 9.8E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 9.8E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 229 243 9.8E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 Pfam PF00561 alpha/beta hydrolase fold 33 270 1.7E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS23800 5d2a27fa6ae98f7ace767b7eb43555f9 285 Gene3D G3DSA:3.40.50.1820 11 284 4.1E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 PANTHER PTHR30160 10 305 6.7E-42 T 23-04-2016 NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 PANTHER PTHR30160:SF7 10 305 6.7E-42 T 23-04-2016 NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 Gene3D G3DSA:3.40.50.2000 10 163 6.3E-29 T 23-04-2016 NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 Gene3D G3DSA:3.40.50.2000 181 321 1.9E-34 T 23-04-2016 NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 SUPERFAMILY SSF53756 10 320 1.78E-66 T 23-04-2016 NIAKO_RS11005 7f48addfefddccc06c41e7a0f1e844e7 372 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 84 307 4.5E-29 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS30910 00acae184f117cb4e0787e166fd59dc7 283 Pfam PF04228 Putative neutral zinc metallopeptidase 1 277 6.2E-117 T 23-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative NIAKO_RS30910 00acae184f117cb4e0787e166fd59dc7 283 PANTHER PTHR30168 2 282 3.7E-127 T 23-04-2016 NIAKO_RS25435 a36e4b3503dbe72ba710965d328e3517 340 Pfam PF11751 Protein of unknown function (DUF3308) 17 325 3.5E-72 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS25435 a36e4b3503dbe72ba710965d328e3517 340 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 325 8.4E-77 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 PANTHER PTHR11751 14 385 1.2E-114 T 23-04-2016 NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 Gene3D G3DSA:3.40.640.10 47 256 9.3E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 SUPERFAMILY SSF53383 1 385 1.9E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 Pfam PF00155 Aminotransferase class I and II 30 382 9.2E-58 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 PANTHER PTHR11751:SF305 14 385 1.2E-114 T 23-04-2016 NIAKO_RS22125 9b528162876af137a1675ec8947129b0 392 Gene3D G3DSA:3.90.1150.10 257 385 7.4E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS00865 19e16c4c2311c645d4e50de666dfdaf3 486 SUPERFAMILY SSF48452 17 485 2.91E-91 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00865 19e16c4c2311c645d4e50de666dfdaf3 486 Pfam PF12771 Starch-binding associating with outer membrane 4 485 4.3E-28 T 23-04-2016 NIAKO_RS00865 19e16c4c2311c645d4e50de666dfdaf3 486 PANTHER PTHR35148 1 484 2.6E-27 T 23-04-2016 NIAKO_RS05065 e617f9daf10ee3843dd15c8bf6f98ef2 149 Gene3D G3DSA:3.30.565.10 25 109 3.8E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS05065 e617f9daf10ee3843dd15c8bf6f98ef2 149 SUPERFAMILY SSF55874 25 146 1.44E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 1 84 6.0E-23 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 PANTHER PTHR13822 1 81 4.9E-16 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 Gene3D G3DSA:2.60.15.10 1 82 2.9E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 81 1.4E-23 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 6 66 1.0E-7 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS27125 b32f70d226c5d9175383c1399c6cc535 85 SUPERFAMILY SSF51344 1 81 1.06E-19 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NIAKO_RS14995 22b792bdf554fee7d4c3401544134097 1198 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 861 946 6.3E-15 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS23155 63163582d3abcd92964675ae441e792e 304 SUPERFAMILY SSF53756 20 267 2.51E-6 T 23-04-2016 NIAKO_RS08770 0f519f5e1fa2535e98834e6b1e3310ba 312 SUPERFAMILY SSF55961 149 304 1.14E-8 T 23-04-2016 NIAKO_RS18820 7e24d74792966ba3e6ba6606c10a4946 419 Pfam PF16405 Domain of unknown function (DUF5013) 241 394 7.9E-40 T 23-04-2016 IPR032181 Domain of unknown function DUF5013 NIAKO_RS18820 7e24d74792966ba3e6ba6606c10a4946 419 Pfam PF16389 Domain of unknown function 21 222 1.6E-61 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214:SF2 551 677 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214:SF2 412 535 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214:SF2 296 342 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214:SF2 2 228 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214:SF2 766 962 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214 551 677 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214 412 535 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214 296 342 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214 2 228 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 PANTHER PTHR16214 766 962 1.9E-180 T 23-04-2016 NIAKO_RS28865 4a78c9d4160bca44d5ce367662939a56 1022 Pfam PF11028 Protein of unknown function (DUF2723) 34 212 2.1E-69 T 23-04-2016 IPR021280 Protein of unknown function DUF2723 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 Pfam PF14322 Starch-binding associating with outer membrane 24 199 3.1E-11 T 23-04-2016 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 Pfam PF07980 SusD family 341 669 4.9E-32 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 Gene3D G3DSA:1.25.40.10 266 359 1.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 Gene3D G3DSA:1.25.40.10 404 497 1.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 Gene3D G3DSA:1.25.40.10 210 233 1.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 SUPERFAMILY SSF48452 640 669 2.4E-63 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 SUPERFAMILY SSF48452 266 525 2.4E-63 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS20895 5751c8becff43ca0e47cdfec0656f62d 676 SUPERFAMILY SSF48452 20 233 2.4E-63 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS27275 89a09e49204ea2cd0d31f688f11a01c3 249 Pfam PF13568 Outer membrane protein beta-barrel domain 60 221 1.1E-15 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 PANTHER PTHR11019 101 181 1.7E-13 T 23-04-2016 NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 SMART SM00342 91 173 1.3E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 Pfam PF12833 Helix-turn-helix domain 100 174 3.4E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 PANTHER PTHR11019:SF136 101 181 1.7E-13 T 23-04-2016 NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 Gene3D G3DSA:1.10.10.60 127 175 9.9E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS00145 51dff4bf85b2b2b8f8ddb050d2a35b13 191 SUPERFAMILY SSF46689 127 175 1.08E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS31585 9cf30435268d8d218cf02d3bb5a79db7 186 Pfam PF02472 Biopolymer transport protein ExbD/TolR 20 168 1.6E-16 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NIAKO_RS01035 abfc21a88c6fd0c0c6b0843938fad8e8 247 SUPERFAMILY SSF50998 37 237 1.49E-6 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS01035 abfc21a88c6fd0c0c6b0843938fad8e8 247 Pfam PF08309 LVIVD repeat 34 72 0.006 T 23-04-2016 IPR013211 LVIVD NIAKO_RS33340 a842990ac8304ca8e9190759d5e570d8 434 SUPERFAMILY SSF53756 41 240 1.44E-12 T 23-04-2016 NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 Gene3D G3DSA:1.20.1250.20 229 439 1.3E-15 T 23-04-2016 NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 PANTHER PTHR11662 10 440 3.5E-132 T 23-04-2016 NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 SUPERFAMILY SSF103473 16 442 2.49E-73 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 Pfam PF07690 Major Facilitator Superfamily 27 391 2.6E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 Gene3D G3DSA:1.20.1250.20 18 210 5.8E-47 T 23-04-2016 NIAKO_RS26005 ec6020dcf1e2343f661ce5f8c6b13f81 443 PANTHER PTHR11662:SF277 10 440 3.5E-132 T 23-04-2016 NIAKO_RS08095 1ae1fa221844662e021ce61c44839ff4 290 Pfam PF06283 Trehalose utilisation 34 252 1.9E-32 T 23-04-2016 IPR029010 ThuA-like domain NIAKO_RS08095 1ae1fa221844662e021ce61c44839ff4 290 SUPERFAMILY SSF52317 33 281 5.49E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS08095 1ae1fa221844662e021ce61c44839ff4 290 Gene3D G3DSA:3.40.50.880 30 285 6.4E-24 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS22085 ffb12eacb28432628792027e0aa091c8 108 PANTHER PTHR33777 6 107 3.0E-19 T 23-04-2016 NIAKO_RS22085 ffb12eacb28432628792027e0aa091c8 108 Gene3D G3DSA:3.30.70.930 6 100 2.1E-25 T 23-04-2016 IPR029756 MTH1187/YkoF-like NIAKO_RS22085 ffb12eacb28432628792027e0aa091c8 108 SUPERFAMILY SSF89957 5 98 1.44E-21 T 23-04-2016 IPR029756 MTH1187/YkoF-like NIAKO_RS22085 ffb12eacb28432628792027e0aa091c8 108 Pfam PF01910 Thiamine-binding protein 8 96 2.0E-19 T 23-04-2016 IPR002767 Thiamine-binding protein NIAKO_RS26485 eece93daa83c89b0810691f81fce0ef1 329 Gene3D G3DSA:3.20.20.80 62 324 1.1E-17 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS26485 eece93daa83c89b0810691f81fce0ef1 329 Pfam PF01120 Alpha-L-fucosidase 62 323 5.8E-10 T 23-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 NIAKO_RS26485 eece93daa83c89b0810691f81fce0ef1 329 SUPERFAMILY SSF51445 22 324 2.39E-19 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS07645 31d1cc9a1a9839664da9b097d9de1479 259 Pfam PF02754 Cysteine-rich domain 145 232 1.4E-17 T 23-04-2016 IPR004017 Cysteine-rich domain NIAKO_RS07645 31d1cc9a1a9839664da9b097d9de1479 259 Pfam PF02754 Cysteine-rich domain 19 103 2.7E-17 T 23-04-2016 IPR004017 Cysteine-rich domain NIAKO_RS07645 31d1cc9a1a9839664da9b097d9de1479 259 PANTHER PTHR11921:SF22 8 259 5.4E-118 T 23-04-2016 NIAKO_RS07645 31d1cc9a1a9839664da9b097d9de1479 259 PANTHER PTHR11921 8 259 5.4E-118 T 23-04-2016 NIAKO_RS14335 97b11fae9397962da73908779767e731 73 Pfam PF11127 Protein of unknown function (DUF2892) 1 65 8.9E-20 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 NIAKO_RS04795 cf552ef32a5433f2ee18b9797e56f1aa 291 Pfam PF14321 Domain of unknown function (DUF4382) 50 201 2.7E-22 T 23-04-2016 IPR025491 Domain of unknown function DUF4382 NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 0.0013 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 SUPERFAMILY SSF51658 40 287 4.54E-42 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 Gene3D G3DSA:3.20.20.150 39 287 2.8E-51 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 PANTHER PTHR12110 36 287 1.0E-44 T 23-04-2016 NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 Pfam PF01261 Xylose isomerase-like TIM barrel 60 240 2.1E-15 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 PANTHER PTHR12110:SF23 36 287 1.0E-44 T 23-04-2016 NIAKO_RS30760 4a97a88baf9322572bad18c93ce52904 290 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 18 3.5E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIAKO_RS10680 b809abf983cbcd70ca4a7d3523cf3c44 302 Gene3D G3DSA:3.40.50.2000 203 291 7.1E-12 T 23-04-2016 NIAKO_RS10680 b809abf983cbcd70ca4a7d3523cf3c44 302 Gene3D G3DSA:3.40.50.2000 3 103 3.0E-6 T 23-04-2016 NIAKO_RS10680 b809abf983cbcd70ca4a7d3523cf3c44 302 SUPERFAMILY SSF53756 3 291 1.41E-26 T 23-04-2016 NIAKO_RS10680 b809abf983cbcd70ca4a7d3523cf3c44 302 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 205 261 1.8E-7 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS29820 5c86a9034b230e6e34a3a5114c8d0832 255 Pfam PF13645 L,D-transpeptidase catalytic domain 158 235 2.0E-7 T 23-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain NIAKO_RS25460 c565c28f757fbd3c709e65c3a584987d 602 PANTHER PTHR33361:SF4 28 602 2.4E-162 T 23-04-2016 NIAKO_RS25460 c565c28f757fbd3c709e65c3a584987d 602 Pfam PF05960 Bacterial protein of unknown function (DUF885) 49 594 1.2E-162 T 23-04-2016 IPR010281 Protein of unknown function DUF885 NIAKO_RS25460 c565c28f757fbd3c709e65c3a584987d 602 PANTHER PTHR33361 28 602 2.4E-162 T 23-04-2016 NIAKO_RS30450 b4e6572607a389e1737a4e4c5108f0ca 322 Pfam PF12081 GldM N-terminal domain 29 214 1.2E-15 T 23-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 Pfam PF04773 FecR protein 197 287 6.7E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 PANTHER PTHR30273 1 121 2.6E-57 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 PANTHER PTHR30273 189 423 2.6E-57 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 PANTHER PTHR30273:SF2 1 121 2.6E-57 T 23-04-2016 NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 PANTHER PTHR30273:SF2 189 423 2.6E-57 T 23-04-2016 NIAKO_RS19715 65bab6440781384d17b8c5d21f290ee0 423 Pfam PF16344 Domain of unknown function (DUF4974) 341 417 1.5E-15 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS25415 6ad918201e70e04430a23201047ad819 139 Pfam PF12680 SnoaL-like domain 17 113 4.8E-11 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS25415 6ad918201e70e04430a23201047ad819 139 SUPERFAMILY SSF54427 16 126 1.72E-18 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS25415 6ad918201e70e04430a23201047ad819 139 Gene3D G3DSA:3.10.450.50 1 127 2.0E-27 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS23745 fcb45c9b9bfebd31dd74bb35fed17a9c 324 Pfam PF07485 Domain of Unknown Function (DUF1259) 53 170 7.1E-41 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NIAKO_RS23745 fcb45c9b9bfebd31dd74bb35fed17a9c 324 Pfam PF07485 Domain of Unknown Function (DUF1259) 196 314 6.3E-46 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NIAKO_RS12175 3d6f58b444fc586adc434901a5b95bd5 250 Pfam PF01738 Dienelactone hydrolase family 105 229 1.6E-8 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NIAKO_RS12175 3d6f58b444fc586adc434901a5b95bd5 250 PANTHER PTHR10655 42 248 1.7E-52 T 23-04-2016 NIAKO_RS12175 3d6f58b444fc586adc434901a5b95bd5 250 Gene3D G3DSA:3.40.50.1820 21 250 9.2E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS12175 3d6f58b444fc586adc434901a5b95bd5 250 PANTHER PTHR10655:SF24 42 248 1.7E-52 T 23-04-2016 NIAKO_RS12175 3d6f58b444fc586adc434901a5b95bd5 250 SUPERFAMILY SSF53474 24 248 2.17E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 SMART SM00342 194 277 1.5E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 PANTHER PTHR11019 48 279 1.7E-28 T 23-04-2016 NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 PANTHER PTHR11019:SF45 48 279 1.7E-28 T 23-04-2016 NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 SUPERFAMILY SSF46689 234 279 3.85E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 Gene3D G3DSA:1.10.10.60 234 279 1.1E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS18865 2943ea7ef6bb31fcd76f7c47e8a5daa6 279 Pfam PF12833 Helix-turn-helix domain 200 278 5.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS35930 c1fd4363e20c415e82d481def86111a9 367 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 26 344 2.5E-47 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS35930 c1fd4363e20c415e82d481def86111a9 367 Pfam PF11751 Protein of unknown function (DUF3308) 41 344 1.1E-38 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS31455 b85e524750c9946d7a36c50cee2fce9f 487 Pfam PF14322 Starch-binding associating with outer membrane 94 217 1.3E-17 T 23-04-2016 NIAKO_RS31455 b85e524750c9946d7a36c50cee2fce9f 487 SUPERFAMILY SSF48452 15 486 4.43E-101 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31455 b85e524750c9946d7a36c50cee2fce9f 487 Pfam PF07980 SusD family 294 486 2.5E-29 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS31455 b85e524750c9946d7a36c50cee2fce9f 487 Gene3D G3DSA:1.25.40.10 339 425 3.7E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS31455 b85e524750c9946d7a36c50cee2fce9f 487 Gene3D G3DSA:1.25.40.10 199 307 3.7E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14180 b68a413124a8f02045aacae6b6e039cd 237 Pfam PF02678 Pirin 16 119 4.8E-30 T 23-04-2016 IPR003829 Pirin, N-terminal domain NIAKO_RS14180 b68a413124a8f02045aacae6b6e039cd 237 SUPERFAMILY SSF51182 9 232 6.4E-59 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS14180 b68a413124a8f02045aacae6b6e039cd 237 PANTHER PTHR13903:SF7 10 233 1.3E-73 T 23-04-2016 NIAKO_RS14180 b68a413124a8f02045aacae6b6e039cd 237 Gene3D G3DSA:2.60.120.10 9 236 8.5E-57 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS14180 b68a413124a8f02045aacae6b6e039cd 237 PANTHER PTHR13903 10 233 1.3E-73 T 23-04-2016 IPR012093 Pirin NIAKO_RS17875 845df20bb2c33e9e310b886f026fa163 352 Gene3D G3DSA:3.90.1200.10 114 312 2.0E-15 T 23-04-2016 NIAKO_RS17875 845df20bb2c33e9e310b886f026fa163 352 Pfam PF01636 Phosphotransferase enzyme family 18 251 6.5E-18 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase NIAKO_RS17875 845df20bb2c33e9e310b886f026fa163 352 SUPERFAMILY SSF56112 3 313 3.25E-30 T 23-04-2016 IPR011009 Protein kinase-like domain NIAKO_RS12775 fa993ad8114d89176ee215e664537b9f 165 SUPERFAMILY SSF48371 3 133 1.55E-5 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS12775 fa993ad8114d89176ee215e664537b9f 165 Gene3D G3DSA:1.25.10.10 65 133 2.7E-6 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS36545 5ecd952f8337f8e39a5c311c4e3e3a42 218 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 153 211 2.8E-21 T 23-04-2016 NIAKO_RS36545 5ecd952f8337f8e39a5c311c4e3e3a42 218 PANTHER PTHR41288 1 214 4.0E-21 T 23-04-2016 NIAKO_RS36545 5ecd952f8337f8e39a5c311c4e3e3a42 218 PANTHER PTHR41288:SF1 1 214 4.0E-21 T 23-04-2016 NIAKO_RS22430 9d393f88340742f4b17a4a372b5def05 238 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 223 5.3E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NIAKO_RS22430 9d393f88340742f4b17a4a372b5def05 238 PANTHER PTHR30625 29 235 1.4E-41 T 23-04-2016 NIAKO_RS22430 9d393f88340742f4b17a4a372b5def05 238 PANTHER PTHR30625:SF8 29 235 1.4E-41 T 23-04-2016 NIAKO_RS27945 9ab850d03ca04ea0883e4ba15d6daf85 299 Pfam PF13584 Oxygen tolerance 24 124 3.9E-9 T 23-04-2016 IPR025738 Aerotolerance-related protein BatD NIAKO_RS27115 ec06190724d440fcd80cd0903ed283cf 133 Gene3D G3DSA:3.40.50.2300 3 124 2.3E-25 T 23-04-2016 NIAKO_RS27115 ec06190724d440fcd80cd0903ed283cf 133 PANTHER PTHR26402 3 122 2.6E-22 T 23-04-2016 NIAKO_RS27115 ec06190724d440fcd80cd0903ed283cf 133 Pfam PF00072 Response regulator receiver domain 5 116 3.2E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS27115 ec06190724d440fcd80cd0903ed283cf 133 SUPERFAMILY SSF52172 5 124 3.84E-25 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS27115 ec06190724d440fcd80cd0903ed283cf 133 SMART SM00448 3 116 6.2E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NIAKO_RS18255 8f795e5bce86e42671ee7b9ef0830537 186 Pfam PF13689 Domain of unknown function (DUF4154) 41 182 5.6E-38 T 23-04-2016 IPR025293 Protein of unknown function DUF4154 NIAKO_RS05780 41ed6514bc40531ce79bc11b856ac364 207 Pfam PF08889 WbqC-like protein family 8 140 2.8E-20 T 23-04-2016 IPR014985 WbqC-like protein family NIAKO_RS22425 95f965b55027ed6fef784a31f959e173 133 PANTHER PTHR30558 1 128 1.5E-16 T 23-04-2016 NIAKO_RS22425 95f965b55027ed6fef784a31f959e173 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 128 2.2E-21 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NIAKO_RS14625 8a03a5acd8d70f1e9506ec8947c33ac6 169 Pfam PF08592 Domain of unknown function (DUF1772) 20 158 5.1E-17 T 23-04-2016 IPR013901 Protein of unknown function DUF1772 NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 Pfam PF04773 FecR protein 187 283 2.7E-17 T 23-04-2016 IPR006860 FecR protein NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 PANTHER PTHR30273 189 412 1.3E-56 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 PANTHER PTHR30273 1 132 1.3E-56 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 PANTHER PTHR30273:SF2 189 412 1.3E-56 T 23-04-2016 NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 PANTHER PTHR30273:SF2 1 132 1.3E-56 T 23-04-2016 NIAKO_RS20845 afd63b87803b04468c0b4eda35ad59b5 412 Pfam PF16344 Domain of unknown function (DUF4974) 299 407 1.1E-14 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS10905 d141a9ce812e5a59380f5913359290fb 166 PANTHER PTHR39473 10 163 1.8E-15 T 23-04-2016 NIAKO_RS10905 d141a9ce812e5a59380f5913359290fb 166 PANTHER PTHR39473:SF1 10 163 1.8E-15 T 23-04-2016 NIAKO_RS10905 d141a9ce812e5a59380f5913359290fb 166 SUPERFAMILY SSF109854 13 132 1.39E-6 T 23-04-2016 NIAKO_RS05570 e134e630a94b1c840f50a9fd5d24afc3 78 Pfam PF14086 Domain of unknown function (DUF4266) 29 78 2.1E-18 T 23-04-2016 IPR025362 Domain of unknown function DUF4266 NIAKO_RS25605 efe1ce1cc22e402ba82de8798faecc0a 186 SUPERFAMILY SSF56925 18 184 5.23E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS25605 efe1ce1cc22e402ba82de8798faecc0a 186 Pfam PF13568 Outer membrane protein beta-barrel domain 21 164 2.3E-25 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 Pfam PF01055 Glycosyl hydrolases family 31 229 649 9.8E-98 T 23-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 Pfam PF17137 Domain of unknown function (DUF5110) 671 741 2.6E-7 T 23-04-2016 IPR033403 Domain of unknown function DUF5110 NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 SUPERFAMILY SSF51011 567 647 2.73E-20 T 23-04-2016 NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 SUPERFAMILY SSF51445 238 564 8.43E-50 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 Pfam PF13802 Galactose mutarotase-like 145 208 1.6E-16 T 23-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 PANTHER PTHR22762 137 726 7.4E-128 T 23-04-2016 NIAKO_RS34585 73488152fcf74966b14968af524700d0 791 SUPERFAMILY SSF74650 41 234 8.16E-28 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 Pfam PF04773 FecR protein 188 290 1.9E-14 T 23-04-2016 IPR006860 FecR protein NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 PANTHER PTHR30273 189 414 4.9E-64 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 PANTHER PTHR30273 1 126 4.9E-64 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 Pfam PF16344 Domain of unknown function (DUF4974) 317 414 2.0E-20 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 PANTHER PTHR30273:SF2 189 414 4.9E-64 T 23-04-2016 NIAKO_RS24450 74f6ae4caf4cf12d74329caef877d5a0 417 PANTHER PTHR30273:SF2 1 126 4.9E-64 T 23-04-2016 NIAKO_RS02100 fb8ead000c7dab7fe41612c268d2a8db 178 PANTHER PTHR11241:SF1 1 175 4.8E-48 T 23-04-2016 NIAKO_RS02100 fb8ead000c7dab7fe41612c268d2a8db 178 Gene3D G3DSA:2.70.40.10 1 164 3.1E-44 T 23-04-2016 IPR029054 dUTPase-like NIAKO_RS02100 fb8ead000c7dab7fe41612c268d2a8db 178 PANTHER PTHR11241 1 175 4.8E-48 T 23-04-2016 NIAKO_RS02100 fb8ead000c7dab7fe41612c268d2a8db 178 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 165 7.4E-37 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 NIAKO_RS02100 fb8ead000c7dab7fe41612c268d2a8db 178 SUPERFAMILY SSF51283 1 165 1.09E-42 T 23-04-2016 IPR029054 dUTPase-like NIAKO_RS33730 8c841dde6846e3ac328cb3e6a2d7cf46 338 Pfam PF14093 Domain of unknown function (DUF4271) 127 330 8.2E-36 T 23-04-2016 IPR025367 Protein of unknown function DUF4271 NIAKO_RS24220 4099907a2146b9c61df05cf8fcb0cef1 63 Gene3D G3DSA:1.20.5.1030 1 59 9.8E-18 T 23-04-2016 NIAKO_RS24220 4099907a2146b9c61df05cf8fcb0cef1 63 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 1.4E-16 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 NIAKO_RS24220 4099907a2146b9c61df05cf8fcb0cef1 63 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 1.4E-12 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NIAKO_RS24220 4099907a2146b9c61df05cf8fcb0cef1 63 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 59 11.668 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 Gene3D G3DSA:1.20.1250.20 31 210 1.5E-9 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 Gene3D G3DSA:1.20.1250.20 228 443 1.1E-15 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 PANTHER PTHR23526 408 484 1.2E-69 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 PANTHER PTHR23526 8 391 1.2E-69 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 SUPERFAMILY SSF103473 24 389 1.74E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 SUPERFAMILY SSF103473 416 437 1.74E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 PANTHER PTHR23526:SF2 408 484 1.2E-69 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 PANTHER PTHR23526:SF2 8 391 1.2E-69 T 23-04-2016 NIAKO_RS11010 d6bf464695344d4e415296a0e8121948 492 Pfam PF07690 Major Facilitator Superfamily 30 348 1.3E-16 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS10130 6c82579f9bec444acd645bda3bad09b6 426 PANTHER PTHR15535:SF21 261 371 6.1E-13 T 23-04-2016 NIAKO_RS10130 6c82579f9bec444acd645bda3bad09b6 426 PANTHER PTHR15535 261 371 6.1E-13 T 23-04-2016 NIAKO_RS10130 6c82579f9bec444acd645bda3bad09b6 426 Pfam PF07394 Protein of unknown function (DUF1501) 261 407 2.8E-18 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 NIAKO_RS07025 a791c2b4441ec95d1dfffdb52e0c55e5 576 Pfam PF03572 Peptidase family S41 387 550 1.7E-12 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NIAKO_RS07025 a791c2b4441ec95d1dfffdb52e0c55e5 576 Gene3D G3DSA:3.90.226.10 378 575 3.6E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS07025 a791c2b4441ec95d1dfffdb52e0c55e5 576 SUPERFAMILY SSF52096 360 573 5.14E-32 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS07025 a791c2b4441ec95d1dfffdb52e0c55e5 576 SUPERFAMILY SSF52096 192 262 5.14E-32 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 Pfam PF14322 Starch-binding associating with outer membrane 120 243 1.2E-15 T 23-04-2016 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 Gene3D G3DSA:1.25.40.10 369 383 1.3E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 Gene3D G3DSA:1.25.40.10 444 542 1.3E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 Gene3D G3DSA:1.25.40.10 226 321 1.3E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 Pfam PF07980 SusD family 356 647 1.1E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 SUPERFAMILY SSF48452 368 569 1.71E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 SUPERFAMILY SSF48452 26 340 1.71E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS00195 aaa0b042ee7dbcda6123a201b4d6b742 670 SUPERFAMILY SSF48452 613 647 1.71E-83 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29010 df96f083b3e749188165ea80239bfd4b 433 Pfam PF04434 SWIM zinc finger 64 82 4.8E-4 T 23-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 NIAKO_RS08455 9fa97f68c86c93ab198fdb008642c08b 237 SUPERFAMILY SSF69318 72 150 1.44E-6 T 23-04-2016 NIAKO_RS08455 9fa97f68c86c93ab198fdb008642c08b 237 Gene3D G3DSA:2.130.10.130 44 144 2.1E-4 T 23-04-2016 NIAKO_RS00265 4a04b11add2d06591ab05c091f680b39 405 Pfam PF13229 Right handed beta helix region 159 308 6.1E-9 T 23-04-2016 NIAKO_RS00265 4a04b11add2d06591ab05c091f680b39 405 SUPERFAMILY SSF51126 44 132 4.71E-19 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS00265 4a04b11add2d06591ab05c091f680b39 405 SUPERFAMILY SSF51126 165 392 4.71E-19 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS00265 4a04b11add2d06591ab05c091f680b39 405 Gene3D G3DSA:2.160.20.10 38 373 1.6E-11 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS19005 be9274214036a5150313c313ea815d8d 720 SUPERFAMILY SSF52540 39 214 4.06E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19005 be9274214036a5150313c313ea815d8d 720 Gene3D G3DSA:3.40.50.300 19 179 8.6E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS19005 be9274214036a5150313c313ea815d8d 720 Pfam PF07693 KAP family P-loop domain 22 248 1.1E-40 T 23-04-2016 IPR011646 KAP family P-loop domain NIAKO_RS04050 0625c561446f65c1fa9d60ce5792ab0f 383 PANTHER PTHR30589:SF0 101 231 4.1E-21 T 23-04-2016 NIAKO_RS04050 0625c561446f65c1fa9d60ce5792ab0f 383 PANTHER PTHR30589:SF0 290 375 4.1E-21 T 23-04-2016 NIAKO_RS04050 0625c561446f65c1fa9d60ce5792ab0f 383 PANTHER PTHR30589 101 231 4.1E-21 T 23-04-2016 NIAKO_RS04050 0625c561446f65c1fa9d60ce5792ab0f 383 PANTHER PTHR30589 290 375 4.1E-21 T 23-04-2016 NIAKO_RS04050 0625c561446f65c1fa9d60ce5792ab0f 383 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 101 368 2.0E-33 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NIAKO_RS00790 f9009c1965030e7bb7cbaee596f02b28 167 Pfam PF04191 Phospholipid methyltransferase 45 144 7.2E-12 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 NIAKO_RS00790 f9009c1965030e7bb7cbaee596f02b28 167 PANTHER PTHR12714 74 162 1.9E-21 T 23-04-2016 NIAKO_RS00790 f9009c1965030e7bb7cbaee596f02b28 167 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 119 156 0.009 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 Gene3D G3DSA:1.20.1250.20 9 218 7.8E-19 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 PANTHER PTHR23514 396 482 1.7E-75 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 PANTHER PTHR23514 1 343 1.7E-75 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 Pfam PF07690 Major Facilitator Superfamily 17 445 3.5E-12 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 PANTHER PTHR23514:SF7 396 482 1.7E-75 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 PANTHER PTHR23514:SF7 1 343 1.7E-75 T 23-04-2016 NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 SUPERFAMILY SSF103473 4 277 8.89E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS10605 746d914922868d8e52fc169ae2869571 503 SUPERFAMILY SSF103473 346 484 8.89E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 PRINTS PR00069 Aldo-keto reductase signature 113 131 3.2E-5 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 PRINTS PR00069 Aldo-keto reductase signature 144 161 3.2E-5 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 Pfam PF00248 Aldo/keto reductase family 16 319 1.1E-67 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 SUPERFAMILY SSF51430 1 320 1.57E-97 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 Gene3D G3DSA:3.20.20.100 9 321 1.2E-93 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS14175 633e681b01b7392fecffeb581f8aec2f 352 PANTHER PTHR11732 1 321 4.7E-109 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS33260 052d14aec5414b23872be639090a2852 297 Gene3D G3DSA:3.40.50.720 3 291 7.8E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33260 052d14aec5414b23872be639090a2852 297 PANTHER PTHR10366:SF466 3 296 1.1E-46 T 23-04-2016 NIAKO_RS33260 052d14aec5414b23872be639090a2852 297 PANTHER PTHR10366 3 296 1.1E-46 T 23-04-2016 NIAKO_RS33260 052d14aec5414b23872be639090a2852 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 229 3.6E-32 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS33260 052d14aec5414b23872be639090a2852 297 SUPERFAMILY SSF51735 1 296 7.87E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS17690 fe73a9b4f00e73254d365c3ff62c9eaa 291 Pfam PF01261 Xylose isomerase-like TIM barrel 50 236 1.4E-18 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS17690 fe73a9b4f00e73254d365c3ff62c9eaa 291 PANTHER PTHR12110 28 291 2.3E-19 T 23-04-2016 NIAKO_RS17690 fe73a9b4f00e73254d365c3ff62c9eaa 291 Gene3D G3DSA:3.20.20.150 49 290 1.8E-25 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS17690 fe73a9b4f00e73254d365c3ff62c9eaa 291 SUPERFAMILY SSF51658 48 274 9.8E-27 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS14565 c44267d100090e5758f7beb8bbcc0129 320 PANTHER PTHR11432:SF8 13 320 6.8E-162 T 23-04-2016 NIAKO_RS14565 c44267d100090e5758f7beb8bbcc0129 320 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 203 216 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 NIAKO_RS14565 c44267d100090e5758f7beb8bbcc0129 320 Pfam PF00146 NADH dehydrogenase 11 309 2.8E-121 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS14565 c44267d100090e5758f7beb8bbcc0129 320 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 5 316 24.835 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS14565 c44267d100090e5758f7beb8bbcc0129 320 PANTHER PTHR11432 13 320 6.8E-162 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 87 15.05 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 Gene3D G3DSA:3.30.70.240 1 64 1.4E-26 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 Pfam PF09827 CRISPR associated protein Cas2 1 71 1.5E-22 T 23-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 PANTHER PTHR34405:SF1 1 85 1.7E-23 T 23-04-2016 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 SUPERFAMILY SSF143430 1 81 1.18E-25 T 23-04-2016 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 PANTHER PTHR34405 1 85 1.7E-23 T 23-04-2016 NIAKO_RS23665 c2e23285b102265c703600b2fec40bfb 87 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 82 1.7E-13 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 NIAKO_RS03290 84992e147ad80846761a63b83c91cdb5 145 Gene3D G3DSA:1.10.10.10 9 142 1.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03290 84992e147ad80846761a63b83c91cdb5 145 SUPERFAMILY SSF46785 11 142 7.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS03290 84992e147ad80846761a63b83c91cdb5 145 SMART SM00347 27 127 4.8E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NIAKO_RS03290 84992e147ad80846761a63b83c91cdb5 145 Pfam PF12802 MarR family 35 90 3.7E-12 T 23-04-2016 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 SUPERFAMILY SSF89733 5 358 4.05E-105 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 PANTHER PTHR11091:SF0 3 358 8.2E-127 T 23-04-2016 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 PANTHER PTHR11091 3 358 8.2E-127 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 Gene3D G3DSA:3.30.1370.60 75 288 4.2E-77 T 23-04-2016 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 Pfam PF02615 Malate/L-lactate dehydrogenase 7 348 7.3E-122 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NIAKO_RS24815 9152140c3a622e1aec4c99c9b8f27509 359 Gene3D G3DSA:1.10.1530.10 6 74 1.1E-22 T 23-04-2016 NIAKO_RS21295 c3e12ad7583afd442e7b669dfa2e6bad 182 Pfam PF02620 Uncharacterized ACR, COG1399 58 177 2.8E-15 T 23-04-2016 IPR003772 Protein of unknown function DUF177 NIAKO_RS00070 60beed0372ef7a6de88c75a09637b353 201 PANTHER PTHR30565 35 201 1.0E-47 T 23-04-2016 NIAKO_RS00070 60beed0372ef7a6de88c75a09637b353 201 Gene3D G3DSA:1.20.1260.10 32 194 6.8E-64 T 23-04-2016 IPR012347 Ferritin-related NIAKO_RS00070 60beed0372ef7a6de88c75a09637b353 201 Pfam PF05974 Domain of unknown function (DUF892) 35 191 2.5E-57 T 23-04-2016 IPR010287 Domain of unknown function DUF892 NIAKO_RS00070 60beed0372ef7a6de88c75a09637b353 201 SUPERFAMILY SSF47240 35 184 2.08E-48 T 23-04-2016 IPR009078 Ferritin-like superfamily NIAKO_RS18400 c1b2fb543cb7246156b22beb12e0d224 125 PANTHER PTHR38468 10 122 4.4E-21 T 23-04-2016 NIAKO_RS18400 c1b2fb543cb7246156b22beb12e0d224 125 Pfam PF07784 Protein of unknown function (DUF1622) 27 105 2.8E-23 T 23-04-2016 IPR012427 Protein of unknown function DUF1622 NIAKO_RS26645 42b4952baf97b95046e622c876706b83 291 Pfam PF01381 Helix-turn-helix 8 55 1.0E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS26645 42b4952baf97b95046e622c876706b83 291 Gene3D G3DSA:1.10.260.40 7 61 5.5E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26645 42b4952baf97b95046e622c876706b83 291 SMART SM00530 6 61 1.1E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS26645 42b4952baf97b95046e622c876706b83 291 SUPERFAMILY SSF47413 6 62 4.02E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 SMART SM00387 11 101 0.0064 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 PANTHER PTHR24421 1 99 2.6E-23 T 23-04-2016 NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 SUPERFAMILY SSF55874 8 99 2.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 Gene3D G3DSA:3.30.565.10 13 99 7.5E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 15 100 1.7E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NIAKO_RS21075 8194778842c51489e0b50dc6646d8d88 101 PANTHER PTHR24421:SF1 1 99 2.6E-23 T 23-04-2016 NIAKO_RS01450 6783d85e7bd8abf0ab29b6858826ea4f 136 PANTHER PTHR33639 6 136 2.4E-50 T 23-04-2016 NIAKO_RS01450 6783d85e7bd8abf0ab29b6858826ea4f 136 Pfam PF04134 Protein of unknown function, DUF393 10 119 1.0E-32 T 23-04-2016 IPR007263 Protein of unknown function DUF393 NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 1.4E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 1.4E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 1.4E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.6E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 4.6E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 4.6E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322 179 211 2.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322 13 97 2.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322 113 153 2.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 Gene3D G3DSA:3.40.50.720 7 257 1.8E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25375 72930595cbf142683b491f631407b141 257 Pfam PF00106 short chain dehydrogenase 10 219 6.2E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322:SF376 179 211 2.2E-41 T 23-04-2016 NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322:SF376 13 97 2.2E-41 T 23-04-2016 NIAKO_RS25375 72930595cbf142683b491f631407b141 257 PANTHER PTHR24322:SF376 113 153 2.2E-41 T 23-04-2016 NIAKO_RS25375 72930595cbf142683b491f631407b141 257 SUPERFAMILY SSF51735 8 239 1.26E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS01725 7997f70b2adfb4bd9e29a578dec47f4a 118 SUPERFAMILY SSF54909 43 107 7.24E-5 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS01725 7997f70b2adfb4bd9e29a578dec47f4a 118 Gene3D G3DSA:3.30.70.1060 43 105 5.8E-7 T 23-04-2016 NIAKO_RS15785 32a050e9e80f326e887d87a1dd63e125 192 Gene3D G3DSA:3.90.79.10 4 189 1.5E-58 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS15785 32a050e9e80f326e887d87a1dd63e125 192 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 7 188 2.1E-55 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 NIAKO_RS15785 32a050e9e80f326e887d87a1dd63e125 192 Pfam PF00293 NUDIX domain 45 160 5.4E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS15785 32a050e9e80f326e887d87a1dd63e125 192 SUPERFAMILY SSF55811 11 189 1.62E-47 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS15785 32a050e9e80f326e887d87a1dd63e125 192 PANTHER PTHR11839 1 191 3.4E-42 T 23-04-2016 NIAKO_RS14690 005185d77f1441bfc923b5bcda251107 260 Pfam PF00487 Fatty acid desaturase 47 253 4.1E-18 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Gene3D G3DSA:3.90.1380.10 1 83 9.7E-20 T 23-04-2016 IPR029144 Threonine synthase, N-terminal NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 PANTHER PTHR10314 53 431 1.0E-115 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 PANTHER PTHR10314 25 36 1.0E-115 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Gene3D G3DSA:3.40.50.1100 106 196 2.2E-12 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Gene3D G3DSA:3.40.50.1100 197 319 7.7E-47 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Gene3D G3DSA:3.40.50.1100 322 406 4.3E-18 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 TIGRFAM TIGR00260 thrC: threonine synthase 71 397 2.3E-85 T 23-04-2016 IPR004450 Threonine synthase-like NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 SUPERFAMILY SSF53686 1 431 1.31E-129 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Pfam PF14821 Threonine synthase N terminus 2 79 9.4E-16 T 23-04-2016 IPR029144 Threonine synthase, N-terminal NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 371 9.2E-26 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 PANTHER PTHR10314:SF1 53 431 1.0E-115 T 23-04-2016 NIAKO_RS00560 19f51da2f07ccb8f2b3e32cb49ad76be 433 PANTHER PTHR10314:SF1 25 36 1.0E-115 T 23-04-2016 NIAKO_RS08195 d31811165a501f021f32faac46653c7a 618 SUPERFAMILY SSF48239 72 180 2.35E-12 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS08195 d31811165a501f021f32faac46653c7a 618 SUPERFAMILY SSF48239 255 324 2.35E-12 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS08195 d31811165a501f021f32faac46653c7a 618 Gene3D G3DSA:1.50.10.20 88 201 1.7E-5 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS08195 d31811165a501f021f32faac46653c7a 618 Gene3D G3DSA:1.50.10.20 270 289 1.7E-5 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS18705 eca34491fdbac1e62a6fa3b42b089785 254 SUPERFAMILY SSF52200 5 132 3.27E-20 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS18705 eca34491fdbac1e62a6fa3b42b089785 254 Pfam PF13676 TIR domain 6 101 4.4E-16 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS18705 eca34491fdbac1e62a6fa3b42b089785 254 Gene3D G3DSA:3.40.50.10140 5 120 1.1E-13 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS19225 0f9f9eea4512515ba7fa99b09faefe1c 113 Pfam PF04343 Protein of unknown function, DUF488 5 112 4.5E-33 T 23-04-2016 IPR007438 Protein of unknown function DUF488 NIAKO_RS19225 0f9f9eea4512515ba7fa99b09faefe1c 113 PANTHER PTHR36849:SF1 1 112 3.8E-51 T 23-04-2016 NIAKO_RS19225 0f9f9eea4512515ba7fa99b09faefe1c 113 PANTHER PTHR36849 1 112 3.8E-51 T 23-04-2016 NIAKO_RS24535 e1c2d6b8456e13c26832afe6ecfb9909 339 Gene3D G3DSA:2.130.10.10 49 275 4.1E-7 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS24535 e1c2d6b8456e13c26832afe6ecfb9909 339 SUPERFAMILY SSF75011 50 273 1.02E-13 T 23-04-2016 NIAKO_RS08955 83f76714d7a58bcaee8ded3018951cc3 255 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 253 4.9E-86 T 23-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PANTHER PTHR10804:SF41 1 250 6.1E-82 T 23-04-2016 NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 248 3.1E-78 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 SUPERFAMILY SSF55920 5 247 5.1E-65 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 Gene3D G3DSA:3.90.230.10 4 249 5.1E-70 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PANTHER PTHR10804 1 250 6.1E-82 T 23-04-2016 NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 32.503 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.3E-15 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.3E-15 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.3E-15 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.3E-15 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NIAKO_RS00200 6bea47f1b0010518e589f236217c7a18 254 Pfam PF00557 Metallopeptidase family M24 11 240 7.1E-42 T 23-04-2016 IPR000994 Peptidase M24, structural domain NIAKO_RS03080 6314d826c1ccc0340d655f40bfc93f11 359 Gene3D G3DSA:3.30.2030.10 38 110 6.0E-4 T 23-04-2016 NIAKO_RS17705 bc1bf4cb623be53c62463c90b85e6a34 384 Pfam PF07005 Putative sugar-binding N-terminal domain 2 203 6.5E-33 T 23-04-2016 IPR010737 Putative sugar-binding, N-terminal domain NIAKO_RS17705 bc1bf4cb623be53c62463c90b85e6a34 384 SUPERFAMILY SSF142764 2 375 1.7E-57 T 23-04-2016 NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 Pfam PF14322 Starch-binding associating with outer membrane 109 225 2.5E-21 T 23-04-2016 NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 SUPERFAMILY SSF48452 430 611 2.06E-98 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 SUPERFAMILY SSF48452 19 401 2.06E-98 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 Pfam PF07980 SusD family 313 611 3.2E-40 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 Gene3D G3DSA:1.25.40.10 443 531 7.6E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS14200 7aa7edc7c6e331555fd31d8cedc24a98 611 Gene3D G3DSA:1.25.40.10 208 340 7.6E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS32400 115175f8bd8ea3c2cc80644e171192b2 115 TIGRFAM TIGR03515 GldC: gliding motility-associated protein GldC 3 104 1.4E-35 T 23-04-2016 IPR019854 Gliding motility-associated protein, GldC NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 944 1015 3.4E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 Gene3D G3DSA:2.120.10.80 281 541 1.2E-29 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 Gene3D G3DSA:2.120.10.80 563 634 1.3E-4 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 Gene3D G3DSA:2.120.10.80 35 251 1.9E-24 T 23-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 SUPERFAMILY SSF117281 432 627 4.58E-23 T 23-04-2016 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 Pfam PF13415 Galactose oxidase, central domain 176 213 5.2E-6 T 23-04-2016 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 Pfam PF13415 Galactose oxidase, central domain 127 160 5.4E-5 T 23-04-2016 NIAKO_RS36840 07efb0899c5e9d3d7b2914a4cd113d84 1017 SUPERFAMILY SSF50965 35 303 4.05E-24 T 23-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller NIAKO_RS21005 981f419ddbe6db930935772098ac67a5 456 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 379 456 4.0E-8 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS03640 7115ff5d007d1b75a152026ef6b5a5e4 359 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 284 358 1.6E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS17790 ef4cb41de1e8dc2089daf82a9378684b 473 SUPERFAMILY SSF51126 28 375 2.62E-54 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS17790 ef4cb41de1e8dc2089daf82a9378684b 473 PANTHER PTHR31683:SF9 31 285 2.3E-80 T 23-04-2016 NIAKO_RS17790 ef4cb41de1e8dc2089daf82a9378684b 473 Gene3D G3DSA:2.160.20.10 18 374 1.6E-45 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS17790 ef4cb41de1e8dc2089daf82a9378684b 473 PANTHER PTHR31683 31 285 2.3E-80 T 23-04-2016 NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 Pfam PF04773 FecR protein 196 291 1.4E-19 T 23-04-2016 IPR006860 FecR protein NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273 198 332 1.3E-53 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273 1 128 1.3E-53 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273 350 433 1.3E-53 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 Pfam PF16344 Domain of unknown function (DUF4974) 352 429 8.6E-13 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273:SF2 198 332 1.3E-53 T 23-04-2016 NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273:SF2 1 128 1.3E-53 T 23-04-2016 NIAKO_RS11940 6834cfd966339889ed58f6bad5078ed0 433 PANTHER PTHR30273:SF2 350 433 1.3E-53 T 23-04-2016 NIAKO_RS23965 3eb2430fb2635f847e2a59aa7e3f3b1f 204 Gene3D G3DSA:3.90.550.10 2 84 8.0E-8 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS23965 3eb2430fb2635f847e2a59aa7e3f3b1f 204 SUPERFAMILY SSF53448 3 166 4.17E-10 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS07320 209298b74088cb64bfe5c4f080f3dcb2 645 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 560 645 2.8E-14 T 23-04-2016 IPR026341 Gliding motility-associated, C-terminal domain NIAKO_RS07320 209298b74088cb64bfe5c4f080f3dcb2 645 Pfam PF13585 C-terminal domain of CHU protein family 559 643 1.0E-19 T 23-04-2016 NIAKO_RS18780 189a315dd95d5439dfa608a2942d035a 303 Pfam PF08522 Domain of unknown function (DUF1735) 63 164 3.4E-24 T 23-04-2016 IPR013728 Domain of unknown function DUF1735 NIAKO_RS18780 189a315dd95d5439dfa608a2942d035a 303 Pfam PF14274 Domain of unknown function (DUF4361) 174 287 7.1E-5 T 23-04-2016 IPR025371 Domain of unknown function DUF4361 NIAKO_RS07685 3423691bd70a196c43598bac7132c2c6 430 Pfam PF17116 Domain of unknown function (DUF5103) 30 315 5.9E-90 T 23-04-2016 IPR031345 Protein of unknown function DUF5103 NIAKO_RS06030 0ccf90e467d82bedf7127f72055b262d 917 PANTHER PTHR30189 801 897 9.1E-12 T 23-04-2016 NIAKO_RS06030 0ccf90e467d82bedf7127f72055b262d 917 PANTHER PTHR30189 104 760 9.1E-12 T 23-04-2016 NIAKO_RS06030 0ccf90e467d82bedf7127f72055b262d 917 Gene3D G3DSA:2.60.450.10 104 189 2.7E-4 T 23-04-2016 NIAKO_RS10525 4090001fd6be0d2f168ddce23bc6505c 184 Pfam PF13590 Domain of unknown function (DUF4136) 26 180 1.2E-31 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 NIAKO_RS37125 c961ef88dad1fa00aaa8de988343b834 59 Gene3D G3DSA:2.60.120.10 2 54 3.2E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 PANTHER PTHR22908 32 311 3.3E-17 T 23-04-2016 NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 Gene3D G3DSA:3.40.50.300 15 244 2.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 SUPERFAMILY SSF52540 29 85 5.16E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 SUPERFAMILY SSF52540 124 258 5.16E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 221 5.3E-10 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NIAKO_RS35120 f28e084995df3423f7605d6076a9d1f0 345 SMART SM00382 38 232 6.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain NIAKO_RS03820 e5bfb1f4d5915734c137217120b0304a 207 Pfam PF02230 Phospholipase/Carboxylesterase 14 203 2.4E-19 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 NIAKO_RS03820 e5bfb1f4d5915734c137217120b0304a 207 Gene3D G3DSA:3.40.50.1820 12 202 5.2E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03820 e5bfb1f4d5915734c137217120b0304a 207 SUPERFAMILY SSF53474 12 204 5.72E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS03820 e5bfb1f4d5915734c137217120b0304a 207 PANTHER PTHR10655 14 201 5.8E-22 T 23-04-2016 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 389 197.694 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 5 387 4.6E-169 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 Pfam PF03786 D-mannonate dehydratase (UxuA) 5 384 7.5E-137 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 PIRSF PIRSF016049 4 389 4.7E-168 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 PANTHER PTHR30387 1 389 1.7E-151 T 23-04-2016 NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 SUPERFAMILY SSF51658 5 380 8.71E-76 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 Gene3D G3DSA:3.20.20.150 5 387 2.4E-144 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NIAKO_RS26350 bd8f177a55bc38a174bbe740e6116b2f 389 PANTHER PTHR30387:SF2 1 389 1.7E-151 T 23-04-2016 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 Pfam PF07075 Protein of unknown function (DUF1343) 68 420 5.3E-121 T 23-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 PIRSF PIRSF016719 13 421 1.8E-104 T 23-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 PANTHER PTHR30480:SF3 3 34 8.1E-89 T 23-04-2016 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 PANTHER PTHR30480:SF3 54 421 8.1E-89 T 23-04-2016 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 PANTHER PTHR30480 3 34 8.1E-89 T 23-04-2016 NIAKO_RS03900 a2a4362600e3a83e22a62d3274555304 421 PANTHER PTHR30480 54 421 8.1E-89 T 23-04-2016 NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 SUPERFAMILY SSF53383 3 385 4.27E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 386 1.2E-85 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 Gene3D G3DSA:3.40.640.10 2 271 1.2E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 PANTHER PTHR30244 5 386 8.2E-120 T 23-04-2016 NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 PANTHER PTHR30244:SF3 5 386 8.2E-120 T 23-04-2016 NIAKO_RS26230 1c2b7231a1629d973950b70491bf5390 386 Gene3D G3DSA:3.90.1150.10 279 384 1.9E-24 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NIAKO_RS28495 c891edacd9f06c2b316f7e143fdca3d1 198 Pfam PF11307 Protein of unknown function (DUF3109) 2 186 7.4E-65 T 23-04-2016 IPR021458 Protein of unknown function DUF3109 NIAKO_RS13590 b9860a40a8ec8cdf7cf433bcc19fa2b7 371 Gene3D G3DSA:3.60.130.10 27 342 1.1E-31 T 23-04-2016 NIAKO_RS13590 b9860a40a8ec8cdf7cf433bcc19fa2b7 371 SUPERFAMILY SSF51197 42 341 1.17E-25 T 23-04-2016 NIAKO_RS34620 a18bcf3339c4be8d86382b46d7c8eb82 126 SUPERFAMILY SSF55961 2 125 9.82E-13 T 23-04-2016 NIAKO_RS34620 a18bcf3339c4be8d86382b46d7c8eb82 126 Gene3D G3DSA:3.30.530.20 2 124 1.8E-10 T 23-04-2016 IPR023393 START-like domain NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 SUPERFAMILY SSF51735 1 246 3.17E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PANTHER PTHR24322:SF397 151 182 3.8E-44 T 23-04-2016 NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PANTHER PTHR24322:SF397 7 135 3.8E-44 T 23-04-2016 NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 Gene3D G3DSA:3.40.50.720 2 246 5.8E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PANTHER PTHR24322 151 182 3.8E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 PANTHER PTHR24322 7 135 3.8E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS23790 3e2bacf6fd68b078874f68e137900fe9 283 Pfam PF00106 short chain dehydrogenase 3 192 7.9E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NIAKO_RS12395 2da37b38b6a91ba20cf032f9a982ab5a 159 SUPERFAMILY SSF54427 31 149 1.94E-13 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS12395 2da37b38b6a91ba20cf032f9a982ab5a 159 Gene3D G3DSA:3.10.450.50 33 153 6.1E-9 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 Pfam PF00313 'Cold-shock' DNA-binding domain 88 146 4.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 SMART SM00357 88 148 2.7E-13 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 Gene3D G3DSA:2.40.50.140 87 148 3.5E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 SUPERFAMILY SSF50249 84 146 3.0E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 PRINTS PR00050 Cold shock protein signature 89 104 8.2E-5 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS06975 8065e1689dbc4800a46225b811b52648 149 PRINTS PR00050 Cold shock protein signature 121 139 8.2E-5 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NIAKO_RS00660 180ddc65dffa7dde61a11a1bb2078ca8 760 SMART SM01360 1 70 1.0E-5 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS00660 180ddc65dffa7dde61a11a1bb2078ca8 760 SUPERFAMILY SSF48239 195 527 4.12E-15 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS00660 180ddc65dffa7dde61a11a1bb2078ca8 760 Gene3D G3DSA:1.50.10.20 194 246 8.1E-14 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS00660 180ddc65dffa7dde61a11a1bb2078ca8 760 Gene3D G3DSA:1.50.10.20 294 526 8.1E-14 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NIAKO_RS00660 180ddc65dffa7dde61a11a1bb2078ca8 760 Pfam PF00207 Alpha-2-macroglobulin family 1 70 6.6E-14 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NIAKO_RS34035 42ef2d28cda9027a6e22760110adfe58 95 Pfam PF13239 2TM domain 10 86 2.2E-13 T 23-04-2016 IPR025698 2TM domain NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 SMART SM00342 177 260 1.9E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 Pfam PF12833 Helix-turn-helix domain 187 258 1.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 Gene3D G3DSA:1.10.10.60 168 213 1.7E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 Gene3D G3DSA:1.10.10.60 214 258 2.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 PANTHER PTHR11019 17 257 1.4E-14 T 23-04-2016 NIAKO_RS03000 990e2a7167fb7a4c3d55953dba091247 260 SUPERFAMILY SSF46689 213 258 1.43E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 NIAKO_RS32900 f0a70eab5d327a3b9040b7ce4c0c33a5 162 SUPERFAMILY SSF109854 7 148 2.59E-23 T 23-04-2016 NIAKO_RS32900 f0a70eab5d327a3b9040b7ce4c0c33a5 162 Gene3D G3DSA:1.20.120.450 1 136 1.2E-26 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS32900 f0a70eab5d327a3b9040b7ce4c0c33a5 162 Pfam PF05163 DinB family 5 153 2.8E-20 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS27650 84f9ff3a5d3e0ecaadc05868e037a14b 660 Gene3D G3DSA:2.60.40.670 61 100 4.9E-11 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27650 84f9ff3a5d3e0ecaadc05868e037a14b 660 Pfam PF00801 PKD domain 55 98 4.9E-7 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27650 84f9ff3a5d3e0ecaadc05868e037a14b 660 SUPERFAMILY SSF49299 48 99 2.75E-12 T 23-04-2016 IPR000601 PKD domain NIAKO_RS27640 0604221d8324299fb82ad1af04bd67a3 190 Gene3D G3DSA:1.10.1740.10 8 119 1.3E-11 T 23-04-2016 NIAKO_RS27640 0604221d8324299fb82ad1af04bd67a3 190 SUPERFAMILY SSF88659 114 184 8.5E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS27640 0604221d8324299fb82ad1af04bd67a3 190 SUPERFAMILY SSF88946 8 100 9.68E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS20610 47401b338dff90662cf6b2702c448a29 129 Gene3D G3DSA:3.10.180.10 17 127 3.8E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS20610 47401b338dff90662cf6b2702c448a29 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 121 1.1E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS20610 47401b338dff90662cf6b2702c448a29 129 SUPERFAMILY SSF54593 12 127 6.31E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 Pfam PF13520 Amino acid permease 23 470 3.7E-55 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 PIRSF PIRSF006060 2 528 4.6E-83 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 PANTHER PTHR11785 189 444 4.1E-113 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 PANTHER PTHR11785 486 526 4.1E-113 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 PANTHER PTHR11785 6 128 4.1E-113 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS04495 a409f48de1ef486ab20170fdd49e88d1 580 PANTHER PTHR11785 547 575 4.1E-113 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NIAKO_RS10990 c7148d4aebf1e38d04df6bd72f7c2b75 326 SUPERFAMILY SSF53756 59 315 6.28E-18 T 23-04-2016 NIAKO_RS10990 c7148d4aebf1e38d04df6bd72f7c2b75 326 Pfam PF13524 Glycosyl transferases group 1 224 311 3.8E-7 T 23-04-2016 NIAKO_RS30395 48d4812b170c7d5788a4bb14e0c73c63 515 SUPERFAMILY SSF48452 20 514 2.11E-117 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30395 48d4812b170c7d5788a4bb14e0c73c63 515 Gene3D G3DSA:1.25.40.10 211 305 6.4E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30395 48d4812b170c7d5788a4bb14e0c73c63 515 Gene3D G3DSA:1.25.40.10 358 450 6.4E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30395 48d4812b170c7d5788a4bb14e0c73c63 515 Pfam PF07980 SusD family 290 514 4.8E-46 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS30395 48d4812b170c7d5788a4bb14e0c73c63 515 Pfam PF14322 Starch-binding associating with outer membrane 24 229 3.3E-22 T 23-04-2016 NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 PANTHER PTHR30273 200 403 3.8E-70 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 PANTHER PTHR30273 4 132 3.8E-70 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 Pfam PF04773 FecR protein 198 293 9.4E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 Pfam PF16344 Domain of unknown function (DUF4974) 306 401 6.7E-22 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 PANTHER PTHR30273:SF2 200 403 3.8E-70 T 23-04-2016 NIAKO_RS11850 615f1d0781f5e314eeeddefb8225a4ed 403 PANTHER PTHR30273:SF2 4 132 3.8E-70 T 23-04-2016 NIAKO_RS03230 a81dc28b7b7df97b439714b30fe8d4b2 180 PANTHER PTHR38011:SF2 2 180 3.7E-20 T 23-04-2016 NIAKO_RS03230 a81dc28b7b7df97b439714b30fe8d4b2 180 Gene3D G3DSA:3.40.430.10 2 178 1.9E-33 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS03230 a81dc28b7b7df97b439714b30fe8d4b2 180 Pfam PF01872 RibD C-terminal domain 2 172 7.6E-23 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS03230 a81dc28b7b7df97b439714b30fe8d4b2 180 SUPERFAMILY SSF53597 3 178 3.01E-34 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS03230 a81dc28b7b7df97b439714b30fe8d4b2 180 PANTHER PTHR38011 2 180 3.7E-20 T 23-04-2016 NIAKO_RS28845 95e7b696c951dd2312531b924d5ebad8 259 SUPERFAMILY SSF161098 57 241 6.54E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS28845 95e7b696c951dd2312531b924d5ebad8 259 Gene3D G3DSA:1.10.3720.10 57 247 4.6E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NIAKO_RS25920 2a1c5f592f98b9b15a01c90552a0b3aa 216 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 117 4.7E-10 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS25920 2a1c5f592f98b9b15a01c90552a0b3aa 216 Gene3D G3DSA:3.40.50.720 1 200 2.3E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25920 2a1c5f592f98b9b15a01c90552a0b3aa 216 SUPERFAMILY SSF51735 1 209 2.18E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS25920 2a1c5f592f98b9b15a01c90552a0b3aa 216 PANTHER PTHR10366 3 156 3.7E-16 T 23-04-2016 NIAKO_RS25920 2a1c5f592f98b9b15a01c90552a0b3aa 216 PANTHER PTHR10366 178 210 3.7E-16 T 23-04-2016 NIAKO_RS10675 5175dad8bc4edf6d6daf1bd185907942 376 SUPERFAMILY SSF53756 50 366 6.28E-11 T 23-04-2016 NIAKO_RS16450 68f5a8aeb0a3a81fd2d6a89f211fcb01 191 SUPERFAMILY SSF48452 51 174 1.58E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS16450 68f5a8aeb0a3a81fd2d6a89f211fcb01 191 Gene3D G3DSA:1.25.40.10 51 168 1.5E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03115 3b76e13bcad15b353933b05a610596a5 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 145 1.6E-21 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS03115 3b76e13bcad15b353933b05a610596a5 146 Gene3D G3DSA:3.30.530.20 12 145 9.8E-25 T 23-04-2016 IPR023393 START-like domain NIAKO_RS03115 3b76e13bcad15b353933b05a610596a5 146 SUPERFAMILY SSF55961 12 145 2.88E-24 T 23-04-2016 NIAKO_RS11930 898e9d36dcb6c46f511ec90ff467a05b 527 SUPERFAMILY SSF48452 21 522 1.29E-101 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11930 898e9d36dcb6c46f511ec90ff467a05b 527 Pfam PF07980 SusD family 271 522 1.7E-27 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS11930 898e9d36dcb6c46f511ec90ff467a05b 527 Pfam PF14322 Starch-binding associating with outer membrane 39 225 5.2E-22 T 23-04-2016 NIAKO_RS11930 898e9d36dcb6c46f511ec90ff467a05b 527 Gene3D G3DSA:1.25.40.10 206 301 1.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS11930 898e9d36dcb6c46f511ec90ff467a05b 527 Gene3D G3DSA:1.25.40.10 357 448 1.8E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06880 e5acd11bc57170eae8d8301bc890564d 245 PANTHER PTHR42252 21 228 8.2E-30 T 23-04-2016 NIAKO_RS06880 e5acd11bc57170eae8d8301bc890564d 245 PANTHER PTHR42252:SF1 21 228 8.2E-30 T 23-04-2016 NIAKO_RS06880 e5acd11bc57170eae8d8301bc890564d 245 Pfam PF04256 Protein of unknown function (DUF434) 25 79 6.4E-19 T 23-04-2016 IPR007368 Protein of unknown function DUF434 NIAKO_RS28420 8a1d022678230f64e78c1a617ac6e2e2 145 Pfam PF12869 tRNA_anti-like 40 129 3.7E-17 T 23-04-2016 IPR024422 Protein of unknown function, OB-fold-containing NIAKO_RS00670 8af792b5c26b4d492d7d1aef37c9f7ed 301 Pfam PF14771 Domain of unknown function (DUF4476) 208 296 1.4E-24 T 23-04-2016 IPR028011 Domain of unknown function DUF4476 NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 Pfam PF02272 DHHA1 domain 378 441 7.3E-11 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 26 563 6.3E-161 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 Pfam PF01368 DHH family 80 232 1.7E-11 T 23-04-2016 IPR001667 DDH domain NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 SUPERFAMILY SSF64182 55 457 7.19E-116 T 23-04-2016 NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 PANTHER PTHR30255 1 568 2.8E-207 T 23-04-2016 NIAKO_RS25130 ab5cb5bb5705ed3f705097d20146bca8 578 PANTHER PTHR30255:SF2 1 568 2.8E-207 T 23-04-2016 NIAKO_RS05245 626a62431d2c7301b06077ae3310b7e8 925 Gene3D G3DSA:2.60.40.10 755 834 6.0E-6 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS05245 626a62431d2c7301b06077ae3310b7e8 925 Pfam PF13573 SprB repeat 43 65 1.3E-4 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS12160 180cca3470bbd5439c19654cdfe2dc54 184 Pfam PF07883 Cupin domain 35 93 1.5E-12 T 23-04-2016 IPR013096 Cupin 2, conserved barrel NIAKO_RS12160 180cca3470bbd5439c19654cdfe2dc54 184 Gene3D G3DSA:2.60.120.10 11 155 5.4E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS12160 180cca3470bbd5439c19654cdfe2dc54 184 SUPERFAMILY SSF51182 17 132 1.2E-16 T 23-04-2016 IPR011051 RmlC-like cupin domain NIAKO_RS00280 a092bac50d0f3a9645cac4d36bd6af67 88 SUPERFAMILY SSF53474 13 88 1.94E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS00280 a092bac50d0f3a9645cac4d36bd6af67 88 Gene3D G3DSA:3.40.50.1820 1 88 2.7E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10815 79612f0f4f1bbdf758b66a9961170cce 364 Gene3D G3DSA:3.40.800.10 25 349 1.0E-46 T 23-04-2016 IPR023696 Ureohydrolase domain NIAKO_RS10815 79612f0f4f1bbdf758b66a9961170cce 364 Pfam PF00491 Arginase family 50 343 3.0E-17 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NIAKO_RS10815 79612f0f4f1bbdf758b66a9961170cce 364 SUPERFAMILY SSF52768 41 343 1.98E-39 T 23-04-2016 NIAKO_RS28810 1de3b585fdca297160ffbc4c73f666e0 221 Gene3D G3DSA:2.60.40.10 47 126 1.3E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS28810 1de3b585fdca297160ffbc4c73f666e0 221 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 141 220 9.5E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS35365 561e5687c7405738ba792e9e5b83ae1d 330 Pfam PF12706 Beta-lactamase superfamily domain 84 280 6.9E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS35365 561e5687c7405738ba792e9e5b83ae1d 330 PANTHER PTHR15032:SF4 50 330 1.9E-96 T 23-04-2016 NIAKO_RS35365 561e5687c7405738ba792e9e5b83ae1d 330 PANTHER PTHR15032 50 330 1.9E-96 T 23-04-2016 NIAKO_RS35365 561e5687c7405738ba792e9e5b83ae1d 330 Gene3D G3DSA:3.60.15.10 55 329 1.9E-95 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS35365 561e5687c7405738ba792e9e5b83ae1d 330 SUPERFAMILY SSF56281 61 296 1.57E-34 T 23-04-2016 IPR001279 Metallo-beta-lactamase NIAKO_RS35675 a018fa4cf5570ffe772db6990adf183b 845 Pfam PF01103 Surface antigen 589 830 4.5E-12 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 Gene3D G3DSA:3.90.226.10 4 256 2.0E-82 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 PANTHER PTHR11941:SF76 3 255 3.9E-96 T 23-04-2016 NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 SUPERFAMILY SSF52096 2 257 2.06E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 5.7E-67 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NIAKO_RS30530 18403f641c1d176f3db6f68ab9f13900 258 PANTHER PTHR11941 3 255 3.9E-96 T 23-04-2016 NIAKO_RS09245 f39ca3ddec602e3ee42e338b18cffce1 1532 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 948 1036 9.3E-5 T 23-04-2016 IPR007452 Translocation and assembly module TamB NIAKO_RS09245 f39ca3ddec602e3ee42e338b18cffce1 1532 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1055 1510 2.1E-42 T 23-04-2016 IPR007452 Translocation and assembly module TamB NIAKO_RS29600 cf0e9b1a556cdbbff8110c3dbf6c502c 151 Gene3D G3DSA:3.10.180.10 30 148 1.6E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS29600 cf0e9b1a556cdbbff8110c3dbf6c502c 151 SUPERFAMILY SSF54593 29 146 6.58E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS29600 cf0e9b1a556cdbbff8110c3dbf6c502c 151 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 146 8.5E-11 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIAKO_RS29600 cf0e9b1a556cdbbff8110c3dbf6c502c 151 PANTHER PTHR10374 15 151 2.4E-14 T 23-04-2016 NIAKO_RS31035 3ec3328e38b25d0c8fc522fef7f20a89 130 Pfam PF03203 MerC mercury resistance protein 8 115 1.3E-21 T 23-04-2016 IPR004891 MerC mercury resistance protein NIAKO_RS22685 db944144b7d486df13562fabcac4e416 193 PANTHER PTHR24567 11 193 3.6E-23 T 23-04-2016 NIAKO_RS22685 db944144b7d486df13562fabcac4e416 193 Gene3D G3DSA:2.60.120.10 4 157 2.3E-41 T 23-04-2016 IPR014710 RmlC-like jelly roll fold NIAKO_RS22685 db944144b7d486df13562fabcac4e416 193 SUPERFAMILY SSF51206 7 142 4.58E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like NIAKO_RS22685 db944144b7d486df13562fabcac4e416 193 Pfam PF00027 Cyclic nucleotide-binding domain 31 117 7.4E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain NIAKO_RS22685 db944144b7d486df13562fabcac4e416 193 PANTHER PTHR24567:SF33 11 193 3.6E-23 T 23-04-2016 NIAKO_RS18925 b2f2158a6c37142654c815da36df5412 169 Gene3D G3DSA:3.30.870.10 50 91 5.6E-6 T 23-04-2016 NIAKO_RS18925 b2f2158a6c37142654c815da36df5412 169 SUPERFAMILY SSF56024 50 91 1.41E-5 T 23-04-2016 NIAKO_RS16775 ee694121ddc6e0ec14b577efeab136d6 285 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 229 261 4.2E-6 T 23-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 NIAKO_RS27385 33f39a4397f9764e3b767f2849a217fd 225 Pfam PF05045 Rhamnan synthesis protein F 46 220 2.0E-11 T 23-04-2016 IPR007739 Rhamnan synthesis F NIAKO_RS26960 5b5baa4bf6345290cd8449599d2565d0 497 Gene3D G3DSA:1.25.40.10 407 494 1.8E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26960 5b5baa4bf6345290cd8449599d2565d0 497 SUPERFAMILY SSF48452 323 355 2.84E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26960 5b5baa4bf6345290cd8449599d2565d0 497 SUPERFAMILY SSF48452 395 478 2.84E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26960 5b5baa4bf6345290cd8449599d2565d0 497 SMART SM00028 445 478 7.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS26960 5b5baa4bf6345290cd8449599d2565d0 497 SMART SM00028 406 439 34.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NIAKO_RS25955 88c982c2472c10b39a0ce35717d52d61 255 Pfam PF12679 ABC-2 family transporter protein 53 255 9.5E-10 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 NIAKO_RS04285 315f466386c4befb8e8e9c2a22b9452e 246 Pfam PF09844 Uncharacterized conserved protein (COG2071) 22 220 8.4E-17 T 23-04-2016 IPR018644 Protein of unknown function DUF2071 NIAKO_RS15560 47450021a4f532ffcc5bccba01fd9975 152 PANTHER PTHR33452 9 150 5.2E-14 T 23-04-2016 NIAKO_RS15560 47450021a4f532ffcc5bccba01fd9975 152 Pfam PF07681 DoxX 30 112 5.1E-8 T 23-04-2016 IPR032808 DoxX family NIAKO_RS23835 0eca030f283bb2bb866dea1468600ffd 386 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 351 4.8E-97 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NIAKO_RS23835 0eca030f283bb2bb866dea1468600ffd 386 Gene3D G3DSA:3.20.20.70 11 376 3.5E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS23835 0eca030f283bb2bb866dea1468600ffd 386 PANTHER PTHR22893 1 381 1.5E-178 T 23-04-2016 NIAKO_RS23835 0eca030f283bb2bb866dea1468600ffd 386 SUPERFAMILY SSF51395 15 373 3.4E-120 T 23-04-2016 NIAKO_RS23835 0eca030f283bb2bb866dea1468600ffd 386 PANTHER PTHR22893:SF14 1 381 1.5E-178 T 23-04-2016 NIAKO_RS26390 83d3696b631a7724c020a9bbb0973f47 389 Pfam PF07470 Glycosyl Hydrolase Family 88 68 386 3.1E-25 T 23-04-2016 IPR010905 Glycosyl hydrolase, family 88 NIAKO_RS26390 83d3696b631a7724c020a9bbb0973f47 389 PANTHER PTHR36845 59 387 3.5E-91 T 23-04-2016 NIAKO_RS26390 83d3696b631a7724c020a9bbb0973f47 389 SUPERFAMILY SSF48208 56 387 4.68E-109 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS26390 83d3696b631a7724c020a9bbb0973f47 389 Gene3D G3DSA:1.50.10.10 34 388 8.7E-146 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS26390 83d3696b631a7724c020a9bbb0973f47 389 PANTHER PTHR36845:SF1 59 387 3.5E-91 T 23-04-2016 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 PANTHER PTHR32552 6 687 6.8E-52 T 23-04-2016 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 Gene3D G3DSA:2.40.170.20 157 686 1.2E-77 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 6.6E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 Gene3D G3DSA:2.170.130.10 26 156 3.2E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 Pfam PF00593 TonB dependent receptor 432 685 4.2E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NIAKO_RS33690 715706279f77955c5c7111dfdddf6da6 689 SUPERFAMILY SSF56935 25 687 4.76E-107 T 23-04-2016 NIAKO_RS12305 e4c9d34bad4ac6ffcd38057ccf5dbddf 152 Gene3D G3DSA:2.130.10.130 47 103 3.3E-4 T 23-04-2016 NIAKO_RS12305 e4c9d34bad4ac6ffcd38057ccf5dbddf 152 SUPERFAMILY SSF69318 52 98 8.89E-6 T 23-04-2016 NIAKO_RS37060 40a5721c2ec76ab6b420c3f7b5df7ef9 436 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 363 436 1.3E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37060 40a5721c2ec76ab6b420c3f7b5df7ef9 436 Gene3D G3DSA:2.60.40.10 269 352 9.2E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 15 176 2.6E-50 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 PANTHER PTHR22573 12 178 9.6E-58 T 23-04-2016 NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 PANTHER PTHR22573:SF56 12 178 9.6E-58 T 23-04-2016 NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 Gene3D G3DSA:3.40.50.2020 4 176 3.5E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 SUPERFAMILY SSF53271 6 176 4.59E-45 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS27085 c8f117d9422bf355e596a65a6ba35f0f 178 Pfam PF00156 Phosphoribosyl transferase domain 20 163 3.1E-24 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS09110 fbf1e9997f05c04d1faf54b91306ebee 159 Pfam PF03350 Uncharacterized protein family, UPF0114 8 121 1.5E-17 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 NIAKO_RS03730 f6e7c40d82e8dcc558360be223319957 433 PANTHER PTHR11119:SF9 14 408 2.1E-131 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 NIAKO_RS03730 f6e7c40d82e8dcc558360be223319957 433 PANTHER PTHR11119 14 408 2.1E-131 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS03730 f6e7c40d82e8dcc558360be223319957 433 Pfam PF00860 Permease family 16 394 3.5E-41 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS03730 f6e7c40d82e8dcc558360be223319957 433 PIRSF PIRSF005353 4 433 6.1E-146 T 23-04-2016 IPR026033 Purine permease PbuG-like NIAKO_RS31810 fad05a05ffad1030ce7920824ca6ed6f 429 SUPERFAMILY SSF56601 39 418 9.87E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31810 fad05a05ffad1030ce7920824ca6ed6f 429 PANTHER PTHR22935:SF77 8 428 3.2E-97 T 23-04-2016 NIAKO_RS31810 fad05a05ffad1030ce7920824ca6ed6f 429 Gene3D G3DSA:3.40.710.10 27 408 7.2E-92 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NIAKO_RS31810 fad05a05ffad1030ce7920824ca6ed6f 429 PANTHER PTHR22935 8 428 3.2E-97 T 23-04-2016 NIAKO_RS31810 fad05a05ffad1030ce7920824ca6ed6f 429 Pfam PF00144 Beta-lactamase 45 410 2.6E-73 T 23-04-2016 IPR001466 Beta-lactamase-related NIAKO_RS36870 3991485dec92edbc411f2d05be2862b3 171 Pfam PF01548 Transposase 7 78 5.5E-12 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NIAKO_RS12210 bd8257bce8cea0826b479cc017493e7d 355 PANTHER PTHR23028:SF54 13 355 1.5E-75 T 23-04-2016 NIAKO_RS12210 bd8257bce8cea0826b479cc017493e7d 355 Pfam PF01757 Acyltransferase family 20 341 2.4E-26 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS12210 bd8257bce8cea0826b479cc017493e7d 355 PANTHER PTHR23028 13 355 1.5E-75 T 23-04-2016 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-31 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 SUPERFAMILY SSF64263 1 118 3.4E-45 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.27 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 PANTHER PTHR14413 1 117 7.0E-55 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.5E-41 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 PANTHER PTHR14413:SF5 1 117 7.0E-55 T 23-04-2016 NIAKO_RS21845 34983d567a00b3bfbc1f48bff034de41 168 Gene3D G3DSA:3.90.1030.10 1 117 1.9E-45 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NIAKO_RS15540 b292a9ac85ac442f24110e97e0f6ae14 261 SUPERFAMILY SSF53474 7 260 7.14E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15540 b292a9ac85ac442f24110e97e0f6ae14 261 Pfam PF12697 Alpha/beta hydrolase family 9 210 2.4E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NIAKO_RS15540 b292a9ac85ac442f24110e97e0f6ae14 261 Gene3D G3DSA:3.40.50.1820 6 114 7.5E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS15540 b292a9ac85ac442f24110e97e0f6ae14 261 Gene3D G3DSA:3.40.50.1820 166 260 7.5E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS18345 25c3a9d3243ada0199d92c38eed61a92 566 Pfam PF05345 Putative Ig domain 260 285 4.0E-5 T 23-04-2016 IPR008009 Putative Ig NIAKO_RS18345 25c3a9d3243ada0199d92c38eed61a92 566 Pfam PF05345 Putative Ig domain 66 97 1.1E-4 T 23-04-2016 IPR008009 Putative Ig NIAKO_RS25950 805b1af74230bc63b2251001510526bb 131 Gene3D G3DSA:1.10.490.10 7 118 1.6E-17 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NIAKO_RS25950 805b1af74230bc63b2251001510526bb 131 SUPERFAMILY SSF46458 5 119 4.52E-24 T 23-04-2016 IPR009050 Globin-like NIAKO_RS25950 805b1af74230bc63b2251001510526bb 131 Pfam PF01152 Bacterial-like globin 9 111 3.3E-4 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 NIAKO_RS05135 6d8e3910ed48c6d1fce047f465b0a419 260 SUPERFAMILY SSF49899 51 256 9.5E-17 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS05135 6d8e3910ed48c6d1fce047f465b0a419 260 Gene3D G3DSA:2.60.120.200 50 246 2.9E-11 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS24905 7df7f3ad6548b7e13eeacd55b7d93523 537 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 460 537 4.0E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS24905 7df7f3ad6548b7e13eeacd55b7d93523 537 SUPERFAMILY SSF49785 363 442 3.78E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS29470 a0bdbcc20a5c4e79cba797fac3f51ef3 271 Pfam PF13643 Domain of unknown function (DUF4145) 139 230 1.7E-14 T 23-04-2016 IPR025285 Domain of unknown function DUF4145 NIAKO_RS09825 a1570833f31ddc2222ba87456de23f91 335 Pfam PF04773 FecR protein 115 205 2.9E-20 T 23-04-2016 IPR006860 FecR protein NIAKO_RS09825 a1570833f31ddc2222ba87456de23f91 335 PANTHER PTHR30273 8 329 1.0E-50 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS09825 a1570833f31ddc2222ba87456de23f91 335 PIRSF PIRSF018266 1 326 3.0E-56 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS09825 a1570833f31ddc2222ba87456de23f91 335 Pfam PF16344 Domain of unknown function (DUF4974) 223 313 9.4E-12 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS09825 a1570833f31ddc2222ba87456de23f91 335 PANTHER PTHR30273:SF2 8 329 1.0E-50 T 23-04-2016 NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 Pfam PF16344 Domain of unknown function (DUF4974) 307 407 3.3E-17 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 Pfam PF04773 FecR protein 201 295 5.4E-18 T 23-04-2016 IPR006860 FecR protein NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 PANTHER PTHR30273 203 413 1.3E-51 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 PANTHER PTHR30273 15 133 1.3E-51 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 PANTHER PTHR30273:SF2 203 413 1.3E-51 T 23-04-2016 NIAKO_RS13405 c56f2e0e5ffa2c701d4613d500c987af 413 PANTHER PTHR30273:SF2 15 133 1.3E-51 T 23-04-2016 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 180 22.032 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 Gene3D G3DSA:2.170.120.20 96 186 2.5E-20 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 Gene3D G3DSA:2.40.240.10 4 92 7.6E-26 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 Pfam PF01386 Ribosomal L25p family 6 90 8.6E-22 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 179 3.3E-19 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 176 2.3E-36 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 11 93 1.0E-12 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 SUPERFAMILY SSF50715 10 179 4.88E-43 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 NIAKO_RS00890 fa44fdcdef2e9ddf417b0cf7bfbad3cb 186 PANTHER PTHR33284 4 186 3.7E-36 T 23-04-2016 NIAKO_RS28345 1968c4f720fd677f116c682e48a19bdf 399 PANTHER PTHR15535:SF21 235 342 2.2E-15 T 23-04-2016 NIAKO_RS28345 1968c4f720fd677f116c682e48a19bdf 399 Pfam PF07394 Protein of unknown function (DUF1501) 39 381 1.6E-28 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 NIAKO_RS28345 1968c4f720fd677f116c682e48a19bdf 399 PANTHER PTHR15535 235 342 2.2E-15 T 23-04-2016 NIAKO_RS14005 fc9ca76f783dbfe2e04ad903a2451bd5 376 TIGRFAM TIGR03118 PEPCTERM_chp_1: TIGR03118 family protein 48 375 6.1E-88 T 23-04-2016 IPR017549 Acanthamoeba polyphaga mimivirus, L690 NIAKO_RS14005 fc9ca76f783dbfe2e04ad903a2451bd5 376 SUPERFAMILY SSF101898 65 365 2.17E-10 T 23-04-2016 NIAKO_RS14005 fc9ca76f783dbfe2e04ad903a2451bd5 376 Gene3D G3DSA:2.120.10.30 64 205 1.8E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS14005 fc9ca76f783dbfe2e04ad903a2451bd5 376 Gene3D G3DSA:2.120.10.30 263 339 1.8E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS20455 d508c1685825b1669066ffc3e91bbe95 175 Pfam PF13689 Domain of unknown function (DUF4154) 30 171 2.0E-40 T 23-04-2016 IPR025293 Protein of unknown function DUF4154 NIAKO_RS11195 45c7ee539081ff57e5bf0b4e2124a604 191 Pfam PF03729 Short repeat of unknown function (DUF308) 135 185 3.2E-8 T 23-04-2016 IPR005325 Protein of unknown function DUF308, membrane NIAKO_RS11195 45c7ee539081ff57e5bf0b4e2124a604 191 Pfam PF03729 Short repeat of unknown function (DUF308) 78 146 4.0E-4 T 23-04-2016 IPR005325 Protein of unknown function DUF308, membrane NIAKO_RS11195 45c7ee539081ff57e5bf0b4e2124a604 191 Pfam PF03729 Short repeat of unknown function (DUF308) 21 90 1.7E-12 T 23-04-2016 IPR005325 Protein of unknown function DUF308, membrane NIAKO_RS32295 9b446b6d345c502dfef92b601f0bf715 365 PANTHER PTHR19353 18 352 5.1E-37 T 23-04-2016 NIAKO_RS32295 9b446b6d345c502dfef92b601f0bf715 365 Pfam PF00487 Fatty acid desaturase 70 338 1.3E-31 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NIAKO_RS30990 e6557940d172d5a1a99642c6740b192e 144 Pfam PF08570 Protein of unknown function (DUF1761) 9 141 1.1E-33 T 23-04-2016 IPR013879 Protein of unknown function DUF1761 NIAKO_RS10980 9cd6d73221d5e120dc05b7b300ff03dd 292 Pfam PF00535 Glycosyl transferase family 2 6 108 1.4E-21 T 23-04-2016 IPR001173 Glycosyltransferase 2-like NIAKO_RS10980 9cd6d73221d5e120dc05b7b300ff03dd 292 Gene3D G3DSA:3.90.550.10 3 222 4.6E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS10980 9cd6d73221d5e120dc05b7b300ff03dd 292 SUPERFAMILY SSF53448 1 248 1.13E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS10980 9cd6d73221d5e120dc05b7b300ff03dd 292 PANTHER PTHR22916 1 287 3.7E-27 T 23-04-2016 NIAKO_RS29925 40d3df17d454f3d5f6701ca808eec114 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 233 1.6E-34 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NIAKO_RS29925 40d3df17d454f3d5f6701ca808eec114 255 PANTHER PTHR11941 6 215 9.5E-34 T 23-04-2016 NIAKO_RS29925 40d3df17d454f3d5f6701ca808eec114 255 SUPERFAMILY SSF52096 5 253 9.67E-43 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS29925 40d3df17d454f3d5f6701ca808eec114 255 PANTHER PTHR11941:SF86 6 215 9.5E-34 T 23-04-2016 NIAKO_RS29925 40d3df17d454f3d5f6701ca808eec114 255 Gene3D G3DSA:3.90.226.10 6 253 7.8E-41 T 23-04-2016 IPR029045 ClpP/crotonase-like domain NIAKO_RS32435 de91deb97cdf8fb7a9605655418d7ddc 285 SUPERFAMILY SSF56925 35 213 2.35E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS22320 02da4010093152e97fb6364a37571e8f 293 SUPERFAMILY SSF55486 168 235 4.11E-6 T 23-04-2016 NIAKO_RS22320 02da4010093152e97fb6364a37571e8f 293 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 23 288 6.7E-89 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS22320 02da4010093152e97fb6364a37571e8f 293 Pfam PF15890 Putative zinc-binding metallo-peptidase 38 277 6.0E-82 T 23-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein NIAKO_RS13550 536ee13bf766295cd207a3eee4d34fd7 299 SUPERFAMILY SSF69322 65 248 4.18E-8 T 23-04-2016 NIAKO_RS17870 3856002b43564231e78935c3b2718dc9 147 Gene3D G3DSA:3.10.129.10 5 145 2.7E-42 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS17870 3856002b43564231e78935c3b2718dc9 147 SUPERFAMILY SSF54637 6 144 1.5E-39 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS17870 3856002b43564231e78935c3b2718dc9 147 PANTHER PTHR13078 6 144 5.7E-32 T 23-04-2016 NIAKO_RS17870 3856002b43564231e78935c3b2718dc9 147 Pfam PF01575 MaoC like domain 16 121 2.9E-24 T 23-04-2016 IPR002539 MaoC-like domain NIAKO_RS12220 7f3cd884e5a15022e9984ede42f73cdf 433 Pfam PF01103 Surface antigen 233 403 1.3E-4 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS10090 b9f707e27fbc1ae126af8d2c2ce47293 174 Pfam PF14224 Domain of unknown function (DUF4331) 25 173 8.2E-14 T 23-04-2016 IPR025566 Protein of unknown function DUF4331 NIAKO_RS06125 41d7f6f0c92ae774d5bf0ed09641a50a 178 SUPERFAMILY SSF55961 25 168 5.0E-23 T 23-04-2016 NIAKO_RS31090 f058caed98775b13caeccfa2d535ee5b 413 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 338 412 9.2E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS00090 14a11c17bbf2c30456534dc52505c4db 402 Gene3D G3DSA:3.20.20.80 31 388 4.9E-32 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS00090 14a11c17bbf2c30456534dc52505c4db 402 SUPERFAMILY SSF51445 33 383 4.81E-50 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS00090 14a11c17bbf2c30456534dc52505c4db 402 Pfam PF00232 Glycosyl hydrolase family 1 35 206 7.4E-10 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 NIAKO_RS30445 2b8c4b1623ae8c3b3c017e941495e760 331 Pfam PF14362 Domain of unknown function (DUF4407) 23 314 4.5E-48 T 23-04-2016 IPR025519 Protein of unknown function DUF4407 NIAKO_RS22865 10e3ec23751525a0b526dacfadafbe61 254 SUPERFAMILY SSF69593 7 241 2.35E-20 T 23-04-2016 NIAKO_RS22865 10e3ec23751525a0b526dacfadafbe61 254 SMART SM00563 52 191 3.8E-17 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS22865 10e3ec23751525a0b526dacfadafbe61 254 Pfam PF01553 Acyltransferase 36 188 4.1E-12 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NIAKO_RS05225 bffc61e780b3805017a1594327752923 277 SUPERFAMILY SSF52200 7 127 2.09E-15 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS05225 bffc61e780b3805017a1594327752923 277 Gene3D G3DSA:3.40.50.10140 10 90 1.8E-8 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS05225 bffc61e780b3805017a1594327752923 277 Pfam PF13676 TIR domain 15 110 9.1E-21 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 NIAKO_RS12370 1c341dd3ceb283212873fc558792f2ca 241 Gene3D G3DSA:3.30.565.40 33 130 1.5E-9 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 NIAKO_RS06630 f44233296aed1c5162c989f09d8b0089 344 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 89 334 4.3E-29 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NIAKO_RS24210 40718dd3de40476676436c9e5ea1f7cd 196 PRINTS PR00624 Histone H5 signature 40 57 3.6E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 NIAKO_RS24210 40718dd3de40476676436c9e5ea1f7cd 196 PRINTS PR00624 Histone H5 signature 62 81 3.6E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 NIAKO_RS24210 40718dd3de40476676436c9e5ea1f7cd 196 PRINTS PR00624 Histone H5 signature 9 23 3.6E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 NIAKO_RS24270 6d5afba3a74f2e53d4adc7f26cb32b23 65 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 16.921 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24270 6d5afba3a74f2e53d4adc7f26cb32b23 65 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 10 55 7.7E-12 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS24270 6d5afba3a74f2e53d4adc7f26cb32b23 65 Pfam PF01165 Ribosomal protein S21 4 56 1.2E-13 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NIAKO_RS27490 f750a4c6276be0159fa2e6339c643725 567 Pfam PF08811 Protein of unknown function (DUF1800) 53 566 8.9E-85 T 23-04-2016 IPR014917 Protein of unknown function DUF1800 NIAKO_RS33195 8ca07f9266685874e2c274b1ff2ff29b 392 PANTHER PTHR31061 370 392 2.3E-68 T 23-04-2016 NIAKO_RS33195 8ca07f9266685874e2c274b1ff2ff29b 392 PANTHER PTHR31061 113 352 2.3E-68 T 23-04-2016 NIAKO_RS33195 8ca07f9266685874e2c274b1ff2ff29b 392 PANTHER PTHR31061 2 96 2.3E-68 T 23-04-2016 NIAKO_RS31695 ce66ad040ba750b0fefb9e52189d7a8b 266 Pfam PF09697 Protein of unknown function (Porph_ging) 134 206 4.3E-20 T 23-04-2016 IPR005901 GLPGLI family protein NIAKO_RS31695 ce66ad040ba750b0fefb9e52189d7a8b 266 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 4 250 2.0E-37 T 23-04-2016 IPR005901 GLPGLI family protein NIAKO_RS30665 3fca3772d8565209359fbc20e1d38e88 157 SUPERFAMILY SSF54637 7 139 4.64E-31 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS30665 3fca3772d8565209359fbc20e1d38e88 157 Pfam PF13279 Thioesterase-like superfamily 9 128 3.4E-14 T 23-04-2016 NIAKO_RS30665 3fca3772d8565209359fbc20e1d38e88 157 PANTHER PTHR31793 7 145 7.8E-20 T 23-04-2016 NIAKO_RS30665 3fca3772d8565209359fbc20e1d38e88 157 Gene3D G3DSA:3.10.129.10 7 130 8.8E-28 T 23-04-2016 IPR029069 HotDog domain NIAKO_RS17160 94456f4fc183e0a4c989720296b20b67 97 SUPERFAMILY SSF46894 30 90 6.8E-8 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NIAKO_RS17160 94456f4fc183e0a4c989720296b20b67 97 Gene3D G3DSA:1.10.10.10 36 91 5.1E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS37330 f25807942929b47000c2b1fcacacd41d 210 Pfam PF06736 Protein of unknown function (DUF1211) 13 101 1.1E-23 T 23-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 Gene3D G3DSA:2.40.440.10 114 160 1.1E-12 T 23-04-2016 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 Gene3D G3DSA:2.40.440.10 3 48 1.1E-12 T 23-04-2016 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 PANTHER PTHR41533:SF1 5 229 5.7E-59 T 23-04-2016 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 Pfam PF03734 L,D-transpeptidase catalytic domain 4 173 6.5E-27 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 SUPERFAMILY SSF141523 112 160 3.66E-17 T 23-04-2016 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 SUPERFAMILY SSF141523 2 57 3.66E-17 T 23-04-2016 NIAKO_RS22070 b6fe6f89f963666176f02ca290d3b5ca 239 PANTHER PTHR41533 5 229 5.7E-59 T 23-04-2016 NIAKO_RS23325 da72b3aee2a0ff15898d53de320f5997 442 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 365 441 5.0E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS23325 da72b3aee2a0ff15898d53de320f5997 442 Gene3D G3DSA:2.60.40.10 277 354 1.6E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS03275 14046d43c3ade1f821ff91d1c0a8e722 199 SUPERFAMILY SSF48452 94 197 2.96E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03275 14046d43c3ade1f821ff91d1c0a8e722 199 Gene3D G3DSA:1.25.40.10 95 198 2.9E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 SMART SM00749 154 217 1.7E-6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 SMART SM00749 83 146 28.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 SMART SM00749 8 71 5.6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 Pfam PF04972 BON domain 151 216 1.5E-16 T 23-04-2016 IPR007055 BON domain NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 Pfam PF04972 BON domain 3 70 2.6E-17 T 23-04-2016 IPR007055 BON domain NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 Pfam PF04972 BON domain 78 146 2.1E-17 T 23-04-2016 IPR007055 BON domain NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 PANTHER PTHR34606 3 218 1.5E-52 T 23-04-2016 NIAKO_RS19775 f87a5dd480c3c205e706f7e063364f14 222 PANTHER PTHR34606:SF2 3 218 1.5E-52 T 23-04-2016 NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 SUPERFAMILY SSF52540 1 193 1.78E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 Pfam PF01121 Dephospho-CoA kinase 5 176 1.5E-43 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 PANTHER PTHR10695 1 192 5.6E-43 T 23-04-2016 NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 Gene3D G3DSA:3.40.50.300 2 193 1.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 176 5.9E-37 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NIAKO_RS04950 cfc76623c83dd7711ef2b0bd8ce00bea 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 194 22.372 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NIAKO_RS26950 0623605a154356348fcac1fa489ab1bf 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 256 1.4E-58 T 23-04-2016 NIAKO_RS26950 0623605a154356348fcac1fa489ab1bf 270 Gene3D G3DSA:3.40.50.720 5 257 7.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS26950 0623605a154356348fcac1fa489ab1bf 270 PIRSF PIRSF000094 3 264 7.5E-48 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NIAKO_RS26950 0623605a154356348fcac1fa489ab1bf 270 SUPERFAMILY SSF51735 7 257 5.09E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS33335 9dcf70f0a23cd21a4bc1e2ad233e18ad 373 SUPERFAMILY SSF53756 70 372 1.18E-15 T 23-04-2016 NIAKO_RS33335 9dcf70f0a23cd21a4bc1e2ad233e18ad 373 Pfam PF13692 Glycosyl transferases group 1 205 335 1.6E-13 T 23-04-2016 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 SUPERFAMILY SSF52402 186 264 3.1E-7 T 23-04-2016 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 PANTHER PTHR31964 3 136 8.9E-26 T 23-04-2016 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 PRINTS PR01438 Universal stress protein signature 109 131 5.2E-13 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 PRINTS PR01438 Universal stress protein signature 1 19 5.2E-13 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 PRINTS PR01438 Universal stress protein signature 91 103 5.2E-13 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 Pfam PF00582 Universal stress protein family 211 264 9.0E-6 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 Pfam PF00582 Universal stress protein family 2 131 7.7E-24 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 SUPERFAMILY SSF52402 1 141 3.1E-31 T 23-04-2016 NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 Gene3D G3DSA:3.40.50.620 180 264 1.1E-9 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS35585 0b81439a9f9486bfe263a901862d618e 270 Gene3D G3DSA:3.40.50.620 2 132 5.5E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS24735 24bbfd7a11e7044dcdbba9e7bbd6a7c6 775 PANTHER PTHR38434 51 768 6.1E-37 T 23-04-2016 NIAKO_RS24735 24bbfd7a11e7044dcdbba9e7bbd6a7c6 775 Pfam PF10101 Predicted membrane protein (DUF2339) 100 762 9.5E-82 T 23-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane NIAKO_RS24735 24bbfd7a11e7044dcdbba9e7bbd6a7c6 775 PANTHER PTHR38434:SF1 51 768 6.1E-37 T 23-04-2016 NIAKO_RS12065 5080ffc72bf37d97550c3542a81c1cc0 408 SUPERFAMILY SSF50998 118 239 2.04E-10 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS12065 5080ffc72bf37d97550c3542a81c1cc0 408 SUPERFAMILY SSF50998 312 387 2.04E-10 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS12065 5080ffc72bf37d97550c3542a81c1cc0 408 Gene3D G3DSA:2.130.10.10 114 244 1.7E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS12065 5080ffc72bf37d97550c3542a81c1cc0 408 Gene3D G3DSA:2.130.10.10 331 377 1.7E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 SUPERFAMILY SSF51569 5 293 9.21E-47 T 23-04-2016 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 PANTHER PTHR12128:SF15 1 313 1.5E-43 T 23-04-2016 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 PIRSF PIRSF001365 1 301 6.6E-41 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 SMART SM01130 1 295 2.5E-24 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 Pfam PF00701 Dihydrodipicolinate synthetase family 3 288 1.1E-28 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 Gene3D G3DSA:3.20.20.70 5 293 1.5E-48 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS04555 95f1e23306089032bf6ff6833906af56 322 PANTHER PTHR12128 1 313 1.5E-43 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NIAKO_RS06855 465d77113363acad648508c378f70496 171 PANTHER PTHR23091:SF184 8 151 2.2E-31 T 23-04-2016 NIAKO_RS06855 465d77113363acad648508c378f70496 171 PANTHER PTHR23091 8 151 2.2E-31 T 23-04-2016 NIAKO_RS06855 465d77113363acad648508c378f70496 171 Gene3D G3DSA:3.40.630.30 3 166 1.2E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS06855 465d77113363acad648508c378f70496 171 SUPERFAMILY SSF55729 4 148 1.89E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS06855 465d77113363acad648508c378f70496 171 Pfam PF13673 Acetyltransferase (GNAT) domain 48 152 3.2E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS23385 5238ce4c2274b5d647d18ba767d3fb9d 488 Pfam PF14322 Starch-binding associating with outer membrane 107 240 6.6E-27 T 23-04-2016 NIAKO_RS23385 5238ce4c2274b5d647d18ba767d3fb9d 488 SUPERFAMILY SSF48452 23 485 1.18E-96 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23385 5238ce4c2274b5d647d18ba767d3fb9d 488 Gene3D G3DSA:1.25.40.10 222 426 2.4E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS23385 5238ce4c2274b5d647d18ba767d3fb9d 488 Pfam PF07980 SusD family 341 485 9.5E-28 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS14950 4a33691c0d477921328909f37a83f89e 241 SUPERFAMILY SSF49464 163 230 3.4E-5 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS14950 4a33691c0d477921328909f37a83f89e 241 Gene3D G3DSA:2.60.40.1120 163 235 2.3E-5 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS34535 a6eccb5bf657d70d8ed3567f89ee7ee9 119 Pfam PF14119 Domain of unknown function (DUF4288) 3 85 1.4E-28 T 23-04-2016 IPR025630 Protein of unknown function DUF4288 NIAKO_RS34730 0629e88a6dd104ff9f40d36efb997b1b 559 Pfam PF16120 Domain of unknown function (DUF4836) 30 515 1.7E-23 T 23-04-2016 IPR032276 Protein of unknown function DUF4836 NIAKO_RS26870 db02d53142b9870ff710ab3e66b21120 673 SUPERFAMILY SSF55486 457 560 8.55E-22 T 23-04-2016 NIAKO_RS26870 db02d53142b9870ff710ab3e66b21120 673 SUPERFAMILY SSF55486 328 428 8.55E-22 T 23-04-2016 NIAKO_RS26870 db02d53142b9870ff710ab3e66b21120 673 Pfam PF01433 Peptidase family M1 312 466 9.4E-7 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NIAKO_RS26870 db02d53142b9870ff710ab3e66b21120 673 Gene3D G3DSA:1.10.390.10 400 555 4.4E-14 T 23-04-2016 NIAKO_RS29090 688cb707e0efdf2afd161dbe07229114 141 PANTHER PTHR33990:SF1 1 139 1.6E-51 T 23-04-2016 NIAKO_RS29090 688cb707e0efdf2afd161dbe07229114 141 Gene3D G3DSA:3.10.180.10 8 138 9.1E-47 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS29090 688cb707e0efdf2afd161dbe07229114 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 134 2.8E-10 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NIAKO_RS29090 688cb707e0efdf2afd161dbe07229114 141 PANTHER PTHR33990 1 139 1.6E-51 T 23-04-2016 NIAKO_RS29090 688cb707e0efdf2afd161dbe07229114 141 SUPERFAMILY SSF54593 1 136 5.79E-35 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS21135 b4f7bbfdb08e7a882ee5e640e9565f51 161 Pfam PF11827 Protein of unknown function (DUF3347) 24 155 1.4E-36 T 23-04-2016 IPR021782 Protein of unknown function DUF3347 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 1.1E-89 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 Gene3D G3DSA:3.40.50.620 238 363 6.0E-7 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 Gene3D G3DSA:3.40.50.300 22 229 3.3E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 SUPERFAMILY SSF52402 250 365 1.42E-6 T 23-04-2016 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 PANTHER PTHR24423:SF510 267 285 1.3E-68 T 23-04-2016 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 PANTHER PTHR24423:SF510 1 198 1.3E-68 T 23-04-2016 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 PANTHER PTHR24423 267 285 1.3E-68 T 23-04-2016 NIAKO_RS20275 4536a87d82aa567d5c9de24a90834e9c 377 PANTHER PTHR24423 1 198 1.3E-68 T 23-04-2016 NIAKO_RS12865 f1a4b554ebd6aa178215566597be1e33 144 SUPERFAMILY SSF160719 24 139 4.32E-12 T 23-04-2016 NIAKO_RS12865 f1a4b554ebd6aa178215566597be1e33 144 Pfam PF04965 Gene 25-like lysozyme 25 127 7.1E-18 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD NIAKO_RS12865 f1a4b554ebd6aa178215566597be1e33 144 Gene3D G3DSA:3.10.450.40 18 137 1.4E-12 T 23-04-2016 NIAKO_RS06450 1ae4189d7e2add4c62b6b8573cb4c61a 293 PANTHER PTHR30482:SF10 2 276 6.0E-83 T 23-04-2016 NIAKO_RS06450 1ae4189d7e2add4c62b6b8573cb4c61a 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 275 1.6E-44 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NIAKO_RS06450 1ae4189d7e2add4c62b6b8573cb4c61a 293 PANTHER PTHR30482 2 276 6.0E-83 T 23-04-2016 NIAKO_RS14190 0b8f0342d4dbce7dff3dd28469f0d35b 215 SUPERFAMILY SSF101447 147 152 9.15E-6 T 23-04-2016 NIAKO_RS14190 0b8f0342d4dbce7dff3dd28469f0d35b 215 SUPERFAMILY SSF101447 37 47 9.15E-6 T 23-04-2016 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 Gene3D G3DSA:3.90.79.10 32 153 9.7E-19 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 PANTHER PTHR21340 119 149 1.0E-15 T 23-04-2016 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 PANTHER PTHR21340 1 102 1.0E-15 T 23-04-2016 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 SUPERFAMILY SSF55811 33 151 1.49E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 Pfam PF00293 NUDIX domain 35 132 8.8E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 PANTHER PTHR21340:SF1 119 149 1.0E-15 T 23-04-2016 NIAKO_RS23175 a7cbad0b89c8784f54e0dddde39cd13b 155 PANTHER PTHR21340:SF1 1 102 1.0E-15 T 23-04-2016 NIAKO_RS08485 9c7b546ad891c84aef13868566bee7ec 323 PANTHER PTHR11732 4 307 3.0E-95 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NIAKO_RS08485 9c7b546ad891c84aef13868566bee7ec 323 SUPERFAMILY SSF51430 7 308 3.4E-81 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS08485 9c7b546ad891c84aef13868566bee7ec 323 Pfam PF00248 Aldo/keto reductase family 18 307 8.2E-59 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS08485 9c7b546ad891c84aef13868566bee7ec 323 Gene3D G3DSA:3.20.20.100 5 315 1.9E-88 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain NIAKO_RS01510 d025ec0f56232a458b7322b5a3837666 168 Pfam PF00578 AhpC/TSA family 35 152 2.3E-8 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NIAKO_RS01510 d025ec0f56232a458b7322b5a3837666 168 Gene3D G3DSA:3.40.30.10 8 164 2.3E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS01510 d025ec0f56232a458b7322b5a3837666 168 SUPERFAMILY SSF52833 3 163 1.07E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18340 363a7c0e16362c985b389b4e4f7d39b2 553 Pfam PF07581 The GLUG motif 317 342 6.1E-4 T 23-04-2016 IPR011493 GLUG NIAKO_RS18340 363a7c0e16362c985b389b4e4f7d39b2 553 Pfam PF07581 The GLUG motif 256 280 6.3E-5 T 23-04-2016 IPR011493 GLUG NIAKO_RS00115 936bae6e6d53c0ee70d907a678cfdb58 96 Gene3D G3DSA:1.20.58.280 31 78 3.1E-4 T 23-04-2016 IPR007330 MIT NIAKO_RS00115 936bae6e6d53c0ee70d907a678cfdb58 96 SUPERFAMILY SSF116846 31 79 1.31E-5 T 23-04-2016 IPR007330 MIT NIAKO_RS18650 7f6ee5f30bcbb4acbb2847a8139cee98 234 Gene3D G3DSA:2.40.50.100 64 129 2.4E-4 T 23-04-2016 NIAKO_RS36400 ed247d3cae85d984297d3c223d3dbaf8 824 Gene3D G3DSA:3.40.50.1580 591 786 1.3E-6 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS36400 ed247d3cae85d984297d3c223d3dbaf8 824 SUPERFAMILY SSF53167 597 669 1.14E-6 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS36400 ed247d3cae85d984297d3c223d3dbaf8 824 SUPERFAMILY SSF53167 531 558 1.14E-6 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS36400 ed247d3cae85d984297d3c223d3dbaf8 824 SUPERFAMILY SSF53167 709 788 1.14E-6 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NIAKO_RS16015 1fc6ab3012ca70e6f9a44801da12fb56 210 Pfam PF16357 Putative PepSY_TM-like 23 209 2.7E-48 T 23-04-2016 IPR032307 Putative PepSY TM-like protein NIAKO_RS16015 1fc6ab3012ca70e6f9a44801da12fb56 210 PANTHER PTHR40115 2 210 2.9E-37 T 23-04-2016 NIAKO_RS08340 7e7c9c5614db36be612d045d9c449810 128 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 34 113 3.2E-15 T 23-04-2016 IPR014229 Sporulation protein YtfJ NIAKO_RS34920 3f8067245f47a19a4d1ed9374386e22d 270 Pfam PF14099 Polysaccharide lyase 58 253 1.5E-36 T 23-04-2016 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 Pfam PF16373 Domain of unknown function 334 439 1.0E-22 T 23-04-2016 IPR032280 Domain of unknown function DUF4985 NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 Pfam PF02638 Glycosyl hydrolase-like 10 56 321 6.6E-22 T 23-04-2016 IPR003790 Glycosyl hydrolase-like 10 NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 SUPERFAMILY SSF51445 270 343 4.7E-13 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 SUPERFAMILY SSF51445 56 227 4.7E-13 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 Gene3D G3DSA:3.20.20.80 64 223 3.6E-11 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS25740 1df81b57c6506f5c3775c7bb78d16f2f 460 Gene3D G3DSA:3.20.20.80 285 343 3.6E-11 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS03725 bd2161289a3508a561e4642dc72f4a9e 353 Pfam PF04116 Fatty acid hydroxylase superfamily 141 290 9.8E-25 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS34805 77bc28ad112e88834eefc103b1d795be 165 PANTHER PTHR33269:SF1 1 165 2.1E-46 T 23-04-2016 NIAKO_RS34805 77bc28ad112e88834eefc103b1d795be 165 PANTHER PTHR33269 1 165 2.1E-46 T 23-04-2016 NIAKO_RS34805 77bc28ad112e88834eefc103b1d795be 165 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 162 2.7E-40 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 NIAKO_RS13275 a6ae42220ae19508dece4ca274d3cbac 398 Pfam PF13970 Domain of unknown function (DUF4221) 20 341 2.6E-52 T 23-04-2016 IPR025316 Protein of unknown function DUF4221 NIAKO_RS29060 bb4237d3451f0f2649b8ba59a4c4033d 170 Pfam PF12867 DinB superfamily 24 162 6.1E-12 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS29060 bb4237d3451f0f2649b8ba59a4c4033d 170 SUPERFAMILY SSF109854 16 167 3.05E-16 T 23-04-2016 NIAKO_RS29060 bb4237d3451f0f2649b8ba59a4c4033d 170 Gene3D G3DSA:1.20.120.450 14 167 1.7E-49 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS03065 5d45499ed8f9427ccf0ceb0e3118a54b 374 SUPERFAMILY SSF50974 2 333 9.42E-20 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal NIAKO_RS03065 5d45499ed8f9427ccf0ceb0e3118a54b 374 Gene3D G3DSA:2.130.10.10 48 337 2.8E-18 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS14870 2bf6a8c5886cd407299683bc2febb194 231 SUPERFAMILY SSF51735 49 194 2.27E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS14870 2bf6a8c5886cd407299683bc2febb194 231 Pfam PF01370 NAD dependent epimerase/dehydratase family 44 164 3.6E-8 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS14870 2bf6a8c5886cd407299683bc2febb194 231 Gene3D G3DSA:3.40.50.720 25 192 3.9E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS04515 3aa38623bbc6f8fb34ca639d81470f3e 132 Gene3D G3DSA:3.40.1010.10 41 107 7.8E-4 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NIAKO_RS04515 3aa38623bbc6f8fb34ca639d81470f3e 132 Pfam PF12869 tRNA_anti-like 31 128 3.7E-18 T 23-04-2016 IPR024422 Protein of unknown function, OB-fold-containing NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 SUPERFAMILY SSF52402 146 270 2.26E-10 T 23-04-2016 NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 SUPERFAMILY SSF52402 1 148 6.11E-19 T 23-04-2016 NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 PRINTS PR01438 Universal stress protein signature 1 19 2.4E-7 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 PRINTS PR01438 Universal stress protein signature 99 111 2.4E-7 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 PRINTS PR01438 Universal stress protein signature 116 138 2.4E-7 T 23-04-2016 IPR006015 Universal stress protein A NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 Pfam PF00582 Universal stress protein family 1 138 1.8E-12 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 Gene3D G3DSA:3.40.50.620 1 138 2.8E-20 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS15480 395bff78bcbdd1475b5bdc60b04f99cb 271 Gene3D G3DSA:3.40.50.620 146 269 2.4E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS10030 b440e4137f9e3329cafb2cd75311fca8 121 Gene3D G3DSA:3.10.450.50 4 118 8.6E-7 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS10030 b440e4137f9e3329cafb2cd75311fca8 121 SUPERFAMILY SSF54427 1 121 8.01E-12 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS04360 c362d6598519be87842a8aa1fca91f4b 238 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 9 234 4.7E-41 T 23-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 NIAKO_RS04360 c362d6598519be87842a8aa1fca91f4b 238 SUPERFAMILY SSF81343 5 235 1.96E-32 T 23-04-2016 NIAKO_RS15835 55ec7ee4878f0b68a1b7cc386c4a1766 265 SUPERFAMILY SSF49899 55 248 5.04E-17 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS15835 55ec7ee4878f0b68a1b7cc386c4a1766 265 Gene3D G3DSA:2.60.120.200 55 246 5.3E-19 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS15035 2aa41952a99e30c95961b0f1245538ab 180 Pfam PF00255 Glutathione peroxidase 22 87 1.2E-6 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NIAKO_RS15035 2aa41952a99e30c95961b0f1245538ab 180 SUPERFAMILY SSF52833 22 165 1.36E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS15035 2aa41952a99e30c95961b0f1245538ab 180 Gene3D G3DSA:3.40.30.10 22 171 7.5E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS10235 90ac79b22a306e156e3a7a79be71d1da 428 Gene3D G3DSA:3.40.50.1820 180 367 5.9E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10235 90ac79b22a306e156e3a7a79be71d1da 428 Gene3D G3DSA:3.40.50.1820 116 145 5.9E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS10235 90ac79b22a306e156e3a7a79be71d1da 428 SUPERFAMILY SSF53474 230 359 1.4E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS06545 c1b7f664fd0837fb3e6b5d3316df2c2b 545 SUPERFAMILY SSF48452 120 535 3.67E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06545 c1b7f664fd0837fb3e6b5d3316df2c2b 545 Pfam PF07980 SusD family 411 544 9.3E-8 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS08465 f0a0e4820ddeef23abe83ab25af0e40e 198 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 4.7E-31 T 23-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 NIAKO_RS30890 907cf60cab7fce83826cf25d98c90f70 516 Gene3D G3DSA:1.25.40.10 357 389 8.4E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS30890 907cf60cab7fce83826cf25d98c90f70 516 Gene3D G3DSA:1.25.40.10 80 131 8.4E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03410 dd0477d0d6853f3cfd7bf3410f3f7a0f 212 Pfam PF06439 Domain of Unknown Function (DUF1080) 27 209 4.5E-37 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS13960 740cea29820e05cac6770983b2ed95c4 572 PANTHER PTHR21000 4 572 2.4E-267 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS13960 740cea29820e05cac6770983b2ed95c4 572 SUPERFAMILY SSF52016 374 558 4.0E-58 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIAKO_RS13960 740cea29820e05cac6770983b2ed95c4 572 SUPERFAMILY SSF143975 5 371 2.22E-119 T 23-04-2016 NIAKO_RS13960 740cea29820e05cac6770983b2ed95c4 572 PANTHER PTHR21000:SF14 4 572 2.4E-267 T 23-04-2016 NIAKO_RS13960 740cea29820e05cac6770983b2ed95c4 572 Pfam PF00920 Dehydratase family 39 554 2.7E-176 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NIAKO_RS20105 787d4fe443dc803361d59f0540844148 442 Pfam PF14135 Domain of unknown function (DUF4302) 26 258 1.2E-53 T 23-04-2016 IPR025396 Protein of unknown function DUF4302 NIAKO_RS14730 3fbd69974bbbbffd136b920768343dad 178 SMART SM00014 48 158 1.2E-24 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14730 3fbd69974bbbbffd136b920768343dad 178 SUPERFAMILY SSF48317 7 167 4.97E-42 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14730 3fbd69974bbbbffd136b920768343dad 178 Pfam PF01569 PAP2 superfamily 50 162 9.7E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14730 3fbd69974bbbbffd136b920768343dad 178 Gene3D G3DSA:1.20.144.10 27 163 1.5E-42 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS14730 3fbd69974bbbbffd136b920768343dad 178 PANTHER PTHR14969 1 166 2.2E-29 T 23-04-2016 NIAKO_RS25885 d79bd9309512965a193ede2d78a2d5d0 134 Gene3D G3DSA:1.20.120.160 16 108 2.3E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS25885 d79bd9309512965a193ede2d78a2d5d0 134 SUPERFAMILY SSF47226 16 109 5.23E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS25885 d79bd9309512965a193ede2d78a2d5d0 134 Pfam PF01627 Hpt domain 35 107 1.8E-7 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NIAKO_RS06730 143988ac9984bee24430e435647aad98 135 Gene3D G3DSA:3.40.1350.10 11 77 2.1E-4 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NIAKO_RS36525 5c0db24dbfa661c24ce344699c60bd35 215 Gene3D G3DSA:1.20.144.10 56 208 3.9E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS36525 5c0db24dbfa661c24ce344699c60bd35 215 Pfam PF01569 PAP2 superfamily 100 210 1.9E-18 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS36525 5c0db24dbfa661c24ce344699c60bd35 215 PANTHER PTHR14969 29 213 8.5E-28 T 23-04-2016 NIAKO_RS36525 5c0db24dbfa661c24ce344699c60bd35 215 SUPERFAMILY SSF48317 9 211 2.09E-35 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS36525 5c0db24dbfa661c24ce344699c60bd35 215 SMART SM00014 97 208 1.5E-20 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS08590 5a42eb800ff967c697ef6c8fa1f09a4a 238 Pfam PF04450 Peptidase of plants and bacteria 80 227 4.1E-23 T 23-04-2016 IPR007541 Uncharacterised protein family, basic secretory protein NIAKO_RS08590 5a42eb800ff967c697ef6c8fa1f09a4a 238 PANTHER PTHR33321:SF2 85 230 2.4E-17 T 23-04-2016 NIAKO_RS08590 5a42eb800ff967c697ef6c8fa1f09a4a 238 PANTHER PTHR33321 85 230 2.4E-17 T 23-04-2016 NIAKO_RS19010 694d414b0313c7f271c2cb11af49569b 309 Pfam PF14022 Protein of unknown function (DUF4238) 9 244 3.2E-23 T 23-04-2016 IPR025332 Protein of unknown function DUF4238 NIAKO_RS03995 3d96fbbf4b1a0a38b72046cd6d711450 543 SUPERFAMILY SSF48452 21 543 5.18E-121 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03995 3d96fbbf4b1a0a38b72046cd6d711450 543 Gene3D G3DSA:1.25.40.10 200 303 3.2E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03995 3d96fbbf4b1a0a38b72046cd6d711450 543 Gene3D G3DSA:1.25.40.10 373 471 3.2E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03995 3d96fbbf4b1a0a38b72046cd6d711450 543 Pfam PF07980 SusD family 262 543 3.7E-55 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS03995 3d96fbbf4b1a0a38b72046cd6d711450 543 Pfam PF14322 Starch-binding associating with outer membrane 26 220 5.0E-16 T 23-04-2016 NIAKO_RS10495 37395a853ab275029e9f299d3013b8f4 407 SUPERFAMILY SSF56935 34 398 1.7E-11 T 23-04-2016 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 PANTHER PTHR30160:SF1 3 329 6.2E-40 T 23-04-2016 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 Gene3D G3DSA:3.40.50.2000 7 144 2.9E-17 T 23-04-2016 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 SUPERFAMILY SSF53756 6 331 8.79E-63 T 23-04-2016 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 Gene3D G3DSA:3.40.50.2000 171 331 2.6E-36 T 23-04-2016 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 96 316 3.9E-25 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NIAKO_RS32210 4f268c49280e5070f62a521f3d2f8a7e 340 PANTHER PTHR30160 3 329 6.2E-40 T 23-04-2016 NIAKO_RS30965 10f4c979a65432efe3833a34fd5809af 163 Gene3D G3DSA:3.40.630.30 4 159 1.1E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS30965 10f4c979a65432efe3833a34fd5809af 163 PANTHER PTHR13256 24 159 5.0E-46 T 23-04-2016 NIAKO_RS30965 10f4c979a65432efe3833a34fd5809af 163 SUPERFAMILY SSF55729 4 147 2.45E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase NIAKO_RS30965 10f4c979a65432efe3833a34fd5809af 163 PANTHER PTHR13256:SF20 24 159 5.0E-46 T 23-04-2016 NIAKO_RS30965 10f4c979a65432efe3833a34fd5809af 163 Pfam PF13302 Acetyltransferase (GNAT) domain 31 120 2.0E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 NIAKO_RS04195 e33793a3fe99dc0db97312037d76efd6 66 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 PIRSF PIRSF004810 5 423 6.2E-64 T 23-04-2016 IPR014047 Chromate transporter, long chain NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 PANTHER PTHR33567:SF3 20 257 6.1E-64 T 23-04-2016 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 PANTHER PTHR33567:SF3 274 423 6.1E-64 T 23-04-2016 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 PANTHER PTHR33567 20 257 6.1E-64 T 23-04-2016 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 PANTHER PTHR33567 274 423 6.1E-64 T 23-04-2016 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 Pfam PF02417 Chromate transporter 12 172 9.4E-23 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS31165 67589655c937a91fb53bdde463bece11 424 Pfam PF02417 Chromate transporter 224 417 2.3E-30 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NIAKO_RS29625 868053330b4e3b50dcd554b9f4f4f0ec 485 Pfam PF13205 Bacterial Ig-like domain 41 140 3.3E-16 T 23-04-2016 IPR032812 SbsA, Ig-like domain NIAKO_RS11020 5a2548381a7b095e7895ada070dc9268 71 SUPERFAMILY SSF55008 2 68 9.03E-9 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NIAKO_RS11020 5a2548381a7b095e7895ada070dc9268 71 Gene3D G3DSA:3.30.70.100 3 68 8.9E-11 T 23-04-2016 NIAKO_RS17075 c30ed6198ba7dcf0ce6ac5e93929b3b3 417 Gene3D G3DSA:1.25.40.10 64 207 1.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17075 c30ed6198ba7dcf0ce6ac5e93929b3b3 417 SUPERFAMILY SSF48452 80 205 5.69E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Gene3D G3DSA:3.90.660.10 32 99 2.1E-16 T 23-04-2016 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Gene3D G3DSA:3.90.660.10 266 360 2.1E-16 T 23-04-2016 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Gene3D G3DSA:3.50.50.60 361 417 4.2E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Gene3D G3DSA:3.50.50.60 3 31 4.2E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Gene3D G3DSA:3.50.50.60 176 262 4.2E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 Pfam PF01593 Flavin containing amine oxidoreductase 13 420 3.6E-55 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 SUPERFAMILY SSF51905 3 282 1.62E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 SUPERFAMILY SSF51905 383 421 1.62E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 SUPERFAMILY SSF54373 262 371 1.77E-15 T 23-04-2016 NIAKO_RS19345 e9f71dec36bb1f24f4d94f92013eea3d 422 PANTHER PTHR10742 4 422 1.1E-71 T 23-04-2016 NIAKO_RS17740 2b7ff111118b4eb2c70dbf296245508c 614 Pfam PF13088 BNR repeat-like domain 280 350 5.3E-7 T 23-04-2016 IPR011040 Sialidases NIAKO_RS17740 2b7ff111118b4eb2c70dbf296245508c 614 SUPERFAMILY SSF50939 178 227 3.27E-6 T 23-04-2016 IPR011040 Sialidases NIAKO_RS17740 2b7ff111118b4eb2c70dbf296245508c 614 SUPERFAMILY SSF50939 263 402 3.27E-6 T 23-04-2016 IPR011040 Sialidases NIAKO_RS17740 2b7ff111118b4eb2c70dbf296245508c 614 SUPERFAMILY SSF50939 66 120 3.27E-6 T 23-04-2016 IPR011040 Sialidases NIAKO_RS20735 8a154d99d810094fa905636a71476c44 145 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 58 141 1.5E-9 T 23-04-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like NIAKO_RS20735 8a154d99d810094fa905636a71476c44 145 SUPERFAMILY SSF160574 26 141 1.83E-19 T 23-04-2016 NIAKO_RS33945 1b9f11184777e363763357db89f13895 344 Pfam PF13528 Glycosyl transferase family 1 1 291 1.4E-31 T 23-04-2016 NIAKO_RS33945 1b9f11184777e363763357db89f13895 344 Gene3D G3DSA:3.40.50.2000 231 287 5.7E-5 T 23-04-2016 NIAKO_RS22185 65363261f345c18c96296421453255f4 216 Gene3D G3DSA:3.40.50.1820 56 212 6.8E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22185 65363261f345c18c96296421453255f4 216 SUPERFAMILY SSF53474 4 213 2.36E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01235 b3d8ced7892c89013af809e64bc894eb 532 Pfam PF07980 SusD family 381 521 3.8E-7 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS01235 b3d8ced7892c89013af809e64bc894eb 532 SUPERFAMILY SSF48452 503 523 1.21E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS01235 b3d8ced7892c89013af809e64bc894eb 532 SUPERFAMILY SSF48452 111 473 1.21E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS37490 1ed4429c23be2a932a16eff070c72d71 559 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 482 558 5.3E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS37490 1ed4429c23be2a932a16eff070c72d71 559 Pfam PF14099 Polysaccharide lyase 92 254 1.6E-7 T 23-04-2016 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 NIAKO_RS07680 277f57ab755c455b4c5aae41a4698c8c 409 PANTHER PTHR30489 3 409 2.3E-42 T 23-04-2016 NIAKO_RS07680 277f57ab755c455b4c5aae41a4698c8c 409 Pfam PF02687 FtsX-like permease family 277 402 1.2E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS07680 277f57ab755c455b4c5aae41a4698c8c 409 Pfam PF12704 MacB-like periplasmic core domain 26 197 8.9E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS35705 cb19711a23bdc2994e27ef79aab5b0b9 451 PANTHER PTHR30563 12 435 3.1E-87 T 23-04-2016 NIAKO_RS35705 cb19711a23bdc2994e27ef79aab5b0b9 451 Pfam PF02646 RmuC family 143 430 1.2E-79 T 23-04-2016 IPR003798 DNA recombination RmuC NIAKO_RS23980 398057d680e06664441eeda845ea667e 107 Pfam PF13021 Domain of unknown function (DUF3885) 64 101 6.7E-20 T 23-04-2016 IPR024976 Domain of unknown function DUF3885 NIAKO_RS35520 65380a80fa0e96b9d9502d04d8eded8b 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 18.822 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS35520 65380a80fa0e96b9d9502d04d8eded8b 104 PANTHER PTHR11434 5 103 5.9E-34 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS35520 65380a80fa0e96b9d9502d04d8eded8b 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 98 2.2E-24 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NIAKO_RS26945 147a4938c0564db1ebfd199331280232 73 Pfam PF11387 Protein of unknown function (DUF2795) 11 56 3.5E-17 T 23-04-2016 IPR021527 Protein of unknown function DUF2795 NIAKO_RS05380 d9e5147286b92c9f0f80f36f0c9f101c 244 Pfam PF00149 Calcineurin-like phosphoesterase 1 146 9.4E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS05380 d9e5147286b92c9f0f80f36f0c9f101c 244 PANTHER PTHR24032:SF31 3 244 2.3E-17 T 23-04-2016 NIAKO_RS05380 d9e5147286b92c9f0f80f36f0c9f101c 244 Gene3D G3DSA:3.60.21.10 1 243 6.4E-38 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS05380 d9e5147286b92c9f0f80f36f0c9f101c 244 SUPERFAMILY SSF56300 1 237 4.22E-33 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS05380 d9e5147286b92c9f0f80f36f0c9f101c 244 PANTHER PTHR24032 3 244 2.3E-17 T 23-04-2016 NIAKO_RS24595 6b4c5ba2acde604827a9db6d224d147b 155 Pfam PF08592 Domain of unknown function (DUF1772) 31 149 1.9E-13 T 23-04-2016 IPR013901 Protein of unknown function DUF1772 NIAKO_RS35070 3e3822c122d9e8f77454dfa5c1c2a1c8 403 Gene3D G3DSA:2.120.10.10 73 196 7.8E-9 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35070 3e3822c122d9e8f77454dfa5c1c2a1c8 403 Gene3D G3DSA:2.120.10.10 219 333 1.3E-10 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35070 3e3822c122d9e8f77454dfa5c1c2a1c8 403 Pfam PF13088 BNR repeat-like domain 92 258 1.1E-7 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35070 3e3822c122d9e8f77454dfa5c1c2a1c8 403 SUPERFAMILY SSF50939 73 329 8.18E-17 T 23-04-2016 IPR011040 Sialidases NIAKO_RS35445 a7ff82bcfeb8ee2df1d578a53f0e4443 203 SUPERFAMILY SSF54534 93 183 5.3E-5 T 23-04-2016 NIAKO_RS35445 a7ff82bcfeb8ee2df1d578a53f0e4443 203 Gene3D G3DSA:3.10.50.40 90 170 2.9E-5 T 23-04-2016 NIAKO_RS05720 ded552ff80e01332f9cea15a93cf2722 303 Gene3D G3DSA:3.30.1330.60 134 277 2.2E-5 T 23-04-2016 IPR006665 OmpA-like domain NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 Gene3D G3DSA:2.160.20.10 858 989 7.5E-60 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 Gene3D G3DSA:2.160.20.10 608 820 7.5E-60 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 Gene3D G3DSA:2.160.20.10 399 575 7.5E-60 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 SUPERFAMILY SSF51126 612 769 2.54E-27 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 SUPERFAMILY SSF51126 516 579 2.54E-27 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS12515 faba47cecfaefb9ea12c7969daeac54f 995 SUPERFAMILY SSF51126 401 479 2.54E-27 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 Gene3D G3DSA:3.40.50.880 38 242 6.5E-28 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 SUPERFAMILY SSF52317 43 239 8.85E-19 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 8 274 1.6E-66 T 23-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 PANTHER PTHR36175 6 18 8.7E-50 T 23-04-2016 NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 PANTHER PTHR36175 35 284 8.7E-50 T 23-04-2016 NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 PIRSF PIRSF032067 3 284 8.3E-51 T 23-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 NIAKO_RS15720 ca84d8b39175ef338dc422e8979f4310 287 Pfam PF03575 Peptidase family S51 38 226 7.7E-22 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 NIAKO_RS06815 3f6bd79dbb99868f57d28606e624b5f5 466 Pfam PF14322 Starch-binding associating with outer membrane 52 224 4.2E-24 T 23-04-2016 NIAKO_RS06815 3f6bd79dbb99868f57d28606e624b5f5 466 SUPERFAMILY SSF48452 20 465 4.47E-99 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS06815 3f6bd79dbb99868f57d28606e624b5f5 466 Pfam PF07980 SusD family 297 465 2.6E-25 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS06815 3f6bd79dbb99868f57d28606e624b5f5 466 Gene3D G3DSA:1.25.40.10 205 413 5.0E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS10795 00937cab69fd1f2af106288f8fb5a62c 203 Pfam PF11827 Protein of unknown function (DUF3347) 37 196 9.1E-43 T 23-04-2016 IPR021782 Protein of unknown function DUF3347 NIAKO_RS26655 70d7f11e5817acda4a5886996c15efbb 74 SUPERFAMILY SSF47413 9 68 6.48E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26655 70d7f11e5817acda4a5886996c15efbb 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 2.4E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS26655 70d7f11e5817acda4a5886996c15efbb 74 Gene3D G3DSA:1.10.260.40 10 68 2.7E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS26655 70d7f11e5817acda4a5886996c15efbb 74 SMART SM00530 11 66 1.4E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NIAKO_RS05280 a4ea1767a0a3789859423bb656fe0003 111 Pfam PF12728 Helix-turn-helix domain 57 99 6.7E-8 T 23-04-2016 NIAKO_RS05280 a4ea1767a0a3789859423bb656fe0003 111 SUPERFAMILY SSF46955 57 106 1.1E-7 T 23-04-2016 IPR009061 Putative DNA-binding domain NIAKO_RS05280 a4ea1767a0a3789859423bb656fe0003 111 Gene3D G3DSA:1.10.10.10 57 107 3.2E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS22870 c31c924d21373bcce9a08961e4083c29 240 Pfam PF04402 Protein of unknown function (DUF541) 29 237 1.0E-23 T 23-04-2016 IPR007497 Protein of unknown function DUF541 NIAKO_RS09675 34ec2da9a2445e733a822f3030934b68 92 SUPERFAMILY SSF53474 15 77 1.02E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS09675 34ec2da9a2445e733a822f3030934b68 92 Gene3D G3DSA:3.40.50.1820 17 81 8.6E-8 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS20550 c8d4d9a4ebfe6aac8651e2133ea8b2d4 300 Gene3D G3DSA:3.60.21.10 28 291 4.6E-41 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS20550 c8d4d9a4ebfe6aac8651e2133ea8b2d4 300 PANTHER PTHR22953 66 249 1.4E-15 T 23-04-2016 NIAKO_RS20550 c8d4d9a4ebfe6aac8651e2133ea8b2d4 300 PANTHER PTHR22953:SF0 66 249 1.4E-15 T 23-04-2016 NIAKO_RS20550 c8d4d9a4ebfe6aac8651e2133ea8b2d4 300 Pfam PF00149 Calcineurin-like phosphoesterase 32 249 6.1E-15 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NIAKO_RS20550 c8d4d9a4ebfe6aac8651e2133ea8b2d4 300 SUPERFAMILY SSF56300 31 293 3.34E-48 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS36310 f02b580c256ecee6966128fa340a7a29 436 Pfam PF13699 Domain of unknown function (DUF4157) 128 201 3.3E-30 T 23-04-2016 IPR025295 Domain of unknown function DUF4157 NIAKO_RS25715 d5f9f892b9d33c5a05f7dec4a90472f5 289 Pfam PF07859 alpha/beta hydrolase fold 107 151 1.2E-6 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS25715 d5f9f892b9d33c5a05f7dec4a90472f5 289 Gene3D G3DSA:3.40.50.1820 23 260 3.8E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS25715 d5f9f892b9d33c5a05f7dec4a90472f5 289 SUPERFAMILY SSF53474 22 258 1.9E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS34830 41bea1ce88d52429c06c97eb576d8430 424 PANTHER PTHR30572 137 424 1.6E-66 T 23-04-2016 NIAKO_RS34830 41bea1ce88d52429c06c97eb576d8430 424 PANTHER PTHR30572 1 115 1.6E-66 T 23-04-2016 NIAKO_RS34830 41bea1ce88d52429c06c97eb576d8430 424 Pfam PF02687 FtsX-like permease family 304 417 5.8E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS34830 41bea1ce88d52429c06c97eb576d8430 424 Pfam PF12704 MacB-like periplasmic core domain 21 251 7.4E-26 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS10490 1c39d9cdf4976f57d5e0c8a8ff89594f 356 Pfam PF04338 Protein of unknown function, DUF481 160 356 4.5E-14 T 23-04-2016 IPR007433 Protein of unknown function DUF481 NIAKO_RS20695 701bab16a4cceffa2d1aed35eaa0d8c0 321 SUPERFAMILY SSF50998 59 245 4.39E-5 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS20695 701bab16a4cceffa2d1aed35eaa0d8c0 321 Gene3D G3DSA:2.130.10.10 85 228 9.1E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS23330 1ae1ba578d1abfddfae026546f3afce9 537 Pfam PF13884 Chaperone of endosialidase 393 470 3.0E-13 T 23-04-2016 IPR030392 Intramolecular chaperone auto-processing domain NIAKO_RS14845 c0d3accebd77bc26023e13411e9f5532 263 Gene3D G3DSA:2.60.120.200 26 247 2.6E-28 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS14845 c0d3accebd77bc26023e13411e9f5532 263 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 76 244 4.6E-21 T 23-04-2016 NIAKO_RS14845 c0d3accebd77bc26023e13411e9f5532 263 SUPERFAMILY SSF49899 26 248 5.59E-32 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS33750 d73eb282291cfd9bbda877248bbff1ad 256 SUPERFAMILY SSF58104 65 248 1.31E-6 T 23-04-2016 NIAKO_RS33750 d73eb282291cfd9bbda877248bbff1ad 256 TIGRFAM TIGR03513 GldL_gliding: gliding motility-associated protein GldL 10 253 1.0E-51 T 23-04-2016 IPR019852 Gliding motility-associated protein, GldL NIAKO_RS01325 c119de01901a5840a8ea4b1a0529fb38 304 Pfam PF07859 alpha/beta hydrolase fold 76 277 4.4E-54 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NIAKO_RS01325 c119de01901a5840a8ea4b1a0529fb38 304 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 NIAKO_RS01325 c119de01901a5840a8ea4b1a0529fb38 304 SUPERFAMILY SSF53474 48 299 2.83E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01325 c119de01901a5840a8ea4b1a0529fb38 304 Gene3D G3DSA:3.40.50.1820 27 298 2.5E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01325 c119de01901a5840a8ea4b1a0529fb38 304 PANTHER PTHR23024 73 298 2.7E-59 T 23-04-2016 NIAKO_RS24310 621ea2483122ae0d4c6fbd4579c73d48 369 Gene3D G3DSA:2.40.160.60 34 74 3.2E-5 T 23-04-2016 NIAKO_RS22715 f130e1776132a2061f518d5c9143d71e 229 Pfam PF12099 Protein of unknown function (DUF3575) 16 175 2.2E-6 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS18225 20f9a147ae513d65a10dcfad8d15f91d 184 Gene3D G3DSA:3.40.50.850 3 182 4.5E-50 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NIAKO_RS18225 20f9a147ae513d65a10dcfad8d15f91d 184 SUPERFAMILY SSF52499 3 182 2.22E-49 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NIAKO_RS18225 20f9a147ae513d65a10dcfad8d15f91d 184 PANTHER PTHR11080 3 182 1.2E-39 T 23-04-2016 NIAKO_RS18225 20f9a147ae513d65a10dcfad8d15f91d 184 Pfam PF00857 Isochorismatase family 5 178 3.0E-39 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NIAKO_RS34015 8fcdb0c3a47307df05d859cff2c5c725 438 Gene3D G3DSA:2.60.120.380 368 425 9.1E-4 T 23-04-2016 NIAKO_RS34015 8fcdb0c3a47307df05d859cff2c5c725 438 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 361 436 9.2E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS19585 108dfd28b2aafdd7e3a9c4dbfc85b87d 1010 Gene3D G3DSA:3.40.50.150 222 244 2.3E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS19585 108dfd28b2aafdd7e3a9c4dbfc85b87d 1010 Gene3D G3DSA:3.40.50.150 675 706 2.3E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS19585 108dfd28b2aafdd7e3a9c4dbfc85b87d 1010 Gene3D G3DSA:3.40.50.150 617 632 2.3E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS19585 108dfd28b2aafdd7e3a9c4dbfc85b87d 1010 Gene3D G3DSA:3.40.50.150 326 365 2.3E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS19585 108dfd28b2aafdd7e3a9c4dbfc85b87d 1010 Pfam PF06634 Protein of unknown function (DUF1156) 20 81 3.6E-20 T 23-04-2016 IPR009537 Domain of unknown function DUF1156 NIAKO_RS17070 0fbd177578e0c60ebde323740c9f07f7 204 Gene3D G3DSA:2.60.40.10 143 201 1.2E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS17070 0fbd177578e0c60ebde323740c9f07f7 204 SUPERFAMILY SSF49265 154 198 1.33E-5 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 NIAKO_RS16495 537e7038dac643e34c879bb48238f79d 544 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 475 544 4.0E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS17525 2eb7f5201a68a319c2660ba6270644fb 197 Pfam PF11563 Protoglobin 26 192 6.5E-30 T 23-04-2016 NIAKO_RS17525 2eb7f5201a68a319c2660ba6270644fb 197 SUPERFAMILY SSF46458 20 189 3.88E-13 T 23-04-2016 IPR009050 Globin-like NIAKO_RS17525 2eb7f5201a68a319c2660ba6270644fb 197 Gene3D G3DSA:1.10.490.10 23 124 5.6E-11 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NIAKO_RS21245 e72b962a62a761521184c0a9bade2f7e 517 Pfam PF09594 Protein of unknown function (DUF2029) 76 316 1.8E-27 T 23-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 NIAKO_RS28795 cdbc97e4665fa1b0227bbaba757239a4 171 Gene3D G3DSA:2.30.110.10 35 131 3.1E-11 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS28795 cdbc97e4665fa1b0227bbaba757239a4 171 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 39 127 3.9E-7 T 23-04-2016 NIAKO_RS28795 cdbc97e4665fa1b0227bbaba757239a4 171 SUPERFAMILY SSF50475 37 131 2.69E-8 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS19240 bfa469308116d66310593b2e9a490563 99 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 20 98 4.0E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25020 6bc00cd8a4aeae29aef979e7e5971620 407 Pfam PF13387 Domain of unknown function (DUF4105) 18 160 3.1E-29 T 23-04-2016 IPR025178 Domain of unknown function DUF4105 NIAKO_RS28950 a6f29d81d3e28fbc235e8f1fabcac54e 668 Gene3D G3DSA:2.130.10.10 47 296 4.1E-16 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS28950 a6f29d81d3e28fbc235e8f1fabcac54e 668 SUPERFAMILY SSF110296 50 287 4.05E-17 T 23-04-2016 NIAKO_RS13710 085b9503ec7470add3cd874538f3c747 437 Pfam PF14135 Domain of unknown function (DUF4302) 22 255 5.6E-59 T 23-04-2016 IPR025396 Protein of unknown function DUF4302 NIAKO_RS05965 beb621abd64bc46659a8faae9de34410 98 Pfam PF07798 Protein of unknown function (DUF1640) 6 91 1.2E-6 T 23-04-2016 IPR024461 Coiled-coil domain-containing protein 90-like NIAKO_RS09915 a43391f0e004a7b7a66eb17deddab538 636 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 62 217 2.0E-14 T 23-04-2016 IPR024618 Domain of unknown function DUF3857 NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 Pfam PF13186 Iron-sulfur cluster-binding domain 269 334 2.1E-17 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 SUPERFAMILY SSF102114 45 336 1.44E-49 T 23-04-2016 NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 PANTHER PTHR11228:SF32 44 336 3.1E-36 T 23-04-2016 NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 PANTHER PTHR11228 44 336 3.1E-36 T 23-04-2016 NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 Pfam PF04055 Radical SAM superfamily 52 184 3.7E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NIAKO_RS30730 f4c0c7728314a70398a0b9c44513752b 343 Gene3D G3DSA:3.20.20.70 45 335 7.8E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS03925 1fa216a511bd93382cddf2aacc330220 232 Pfam PF13489 Methyltransferase domain 41 161 1.3E-6 T 23-04-2016 NIAKO_RS03925 1fa216a511bd93382cddf2aacc330220 232 Gene3D G3DSA:3.40.50.150 41 155 3.6E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS03925 1fa216a511bd93382cddf2aacc330220 232 SUPERFAMILY SSF53335 42 179 8.27E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS25600 772754523ebcd7125a09b283625ab1fa 414 Gene3D G3DSA:2.130.10.10 195 392 6.5E-11 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NIAKO_RS25600 772754523ebcd7125a09b283625ab1fa 414 SUPERFAMILY SSF50969 158 386 2.2E-13 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NIAKO_RS20595 74e0e29b7e2d193b44ad5aec4e05c91a 125 Pfam PF07843 Protein of unknown function (DUF1634) 18 124 2.5E-30 T 23-04-2016 IPR012861 Protein of unknown function DUF1634 NIAKO_RS12310 0676a45c72702554b3bb8a79bf011954 97 SUPERFAMILY SSF54909 2 83 9.3E-7 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel NIAKO_RS12310 0676a45c72702554b3bb8a79bf011954 97 Gene3D G3DSA:3.30.70.900 9 78 6.7E-4 T 23-04-2016 NIAKO_RS15765 1669884e7a579be324ccbcb95ba3663f 322 Gene3D G3DSA:3.20.20.80 109 319 2.7E-23 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS15765 1669884e7a579be324ccbcb95ba3663f 322 SUPERFAMILY SSF51445 107 315 5.02E-23 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS16035 777b36bfb3ef1d2b072e4d3ff1b89c94 359 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 338 1.3E-25 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS16035 777b36bfb3ef1d2b072e4d3ff1b89c94 359 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 30 340 9.0E-21 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 PANTHER PTHR30574:SF1 110 185 1.6E-24 T 23-04-2016 NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 PANTHER PTHR30574:SF1 9 79 1.6E-24 T 23-04-2016 NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 Pfam PF04143 Sulphur transport 5 85 3.5E-7 T 23-04-2016 IPR007272 Sulphur transport domain NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 Pfam PF04143 Sulphur transport 117 177 1.0E-10 T 23-04-2016 IPR007272 Sulphur transport domain NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 PANTHER PTHR30574 110 185 1.6E-24 T 23-04-2016 NIAKO_RS32090 e9b8c9c96f2fc84965629cc53048e400 189 PANTHER PTHR30574 9 79 1.6E-24 T 23-04-2016 NIAKO_RS32410 d09cfe17c90cd62db25775d2c53b95f7 180 Pfam PF02674 Colicin V production protein 3 145 8.2E-23 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 NIAKO_RS05590 dee850b417c2c22bf9580d619d254eb0 239 Pfam PF11750 Protein of unknown function (DUF3307) 4 106 1.5E-24 T 23-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 NIAKO_RS32080 e683affb49c5a54771d04c2cd2d777ca 264 PANTHER PTHR30269:SF14 1 264 8.0E-34 T 23-04-2016 NIAKO_RS32080 e683affb49c5a54771d04c2cd2d777ca 264 Pfam PF01925 Sulfite exporter TauE/SafE 7 254 4.7E-38 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS32080 e683affb49c5a54771d04c2cd2d777ca 264 PANTHER PTHR30269 1 264 8.0E-34 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NIAKO_RS25865 b56ebff3222da28b2b07b8e37bef8520 1553 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1474 1551 9.9E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25865 b56ebff3222da28b2b07b8e37bef8520 1553 SMART SM00089 1131 1206 8.8 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25865 b56ebff3222da28b2b07b8e37bef8520 1553 SMART SM00089 1287 1363 9.0 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25865 b56ebff3222da28b2b07b8e37bef8520 1553 SMART SM00089 886 963 1.4 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS25865 b56ebff3222da28b2b07b8e37bef8520 1553 SMART SM00089 251 329 0.35 T 23-04-2016 IPR022409 PKD/Chitinase domain NIAKO_RS31620 586f2d8a13f277dea0c0e8f437beb2fb 767 Pfam PF04024 PspC domain 140 195 2.2E-22 T 23-04-2016 IPR007168 Phage shock protein, PspC, N-terminal NIAKO_RS31620 586f2d8a13f277dea0c0e8f437beb2fb 767 Pfam PF04024 PspC domain 204 288 1.3E-18 T 23-04-2016 IPR007168 Phage shock protein, PspC, N-terminal NIAKO_RS31620 586f2d8a13f277dea0c0e8f437beb2fb 767 PANTHER PTHR33885 93 290 2.9E-23 T 23-04-2016 NIAKO_RS28215 2349c54ec80d493e0ad6adf631341911 323 SUPERFAMILY SSF51261 131 298 1.09E-52 T 23-04-2016 IPR011055 Duplicated hybrid motif NIAKO_RS28215 2349c54ec80d493e0ad6adf631341911 323 Gene3D G3DSA:2.70.70.10 151 299 1.0E-49 T 23-04-2016 NIAKO_RS28215 2349c54ec80d493e0ad6adf631341911 323 PANTHER PTHR21666 55 299 1.6E-45 T 23-04-2016 NIAKO_RS28215 2349c54ec80d493e0ad6adf631341911 323 Pfam PF01551 Peptidase family M23 200 295 1.3E-33 T 23-04-2016 IPR016047 Peptidase M23 NIAKO_RS22370 8c75dd3b4923739b9001c10e6188a6b1 302 PANTHER PTHR23344 33 301 4.3E-57 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 NIAKO_RS22370 8c75dd3b4923739b9001c10e6188a6b1 302 SUPERFAMILY SSF51695 34 301 2.88E-59 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS22370 8c75dd3b4923739b9001c10e6188a6b1 302 PANTHER PTHR23344:SF27 33 301 4.3E-57 T 23-04-2016 NIAKO_RS22370 8c75dd3b4923739b9001c10e6188a6b1 302 Gene3D G3DSA:3.20.20.190 33 302 1.2E-68 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NIAKO_RS22370 8c75dd3b4923739b9001c10e6188a6b1 302 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 39 299 6.2E-38 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NIAKO_RS00075 18f760036046bb1c544583a386f901a8 379 SUPERFAMILY SSF53756 98 368 1.36E-15 T 23-04-2016 NIAKO_RS00075 18f760036046bb1c544583a386f901a8 379 Pfam PF13692 Glycosyl transferases group 1 197 331 1.1E-8 T 23-04-2016 NIAKO_RS08840 68af3c8ff06971eb0b2c83ab1c4f615c 406 SUPERFAMILY SSF48403 79 138 2.64E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS08840 68af3c8ff06971eb0b2c83ab1c4f615c 406 SUPERFAMILY SSF48403 341 405 2.64E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS08840 68af3c8ff06971eb0b2c83ab1c4f615c 406 Gene3D G3DSA:1.25.40.20 76 98 7.6E-10 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS08840 68af3c8ff06971eb0b2c83ab1c4f615c 406 Gene3D G3DSA:1.25.40.20 320 405 7.6E-10 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain NIAKO_RS07260 d8b62cdd18e0d8e760e107d752e154d3 192 SUPERFAMILY SSF54427 65 191 2.46E-18 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS07260 d8b62cdd18e0d8e760e107d752e154d3 192 Gene3D G3DSA:3.10.450.50 65 191 7.7E-13 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS07260 d8b62cdd18e0d8e760e107d752e154d3 192 Pfam PF07366 SnoaL-like polyketide cyclase 66 189 5.2E-13 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NIAKO_RS00140 cdd47cd4a47cd4c184f3e3b67a349eeb 513 Gene3D G3DSA:3.80.30.20 180 342 8.2E-6 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NIAKO_RS00140 cdd47cd4a47cd4c184f3e3b67a349eeb 513 SUPERFAMILY SSF102114 178 325 8.89E-9 T 23-04-2016 NIAKO_RS22460 5c8a5672eaaefc8c2e5a8b3292add9cf 291 PANTHER PTHR39430 58 283 8.9E-34 T 23-04-2016 NIAKO_RS22460 5c8a5672eaaefc8c2e5a8b3292add9cf 291 Pfam PF02517 CAAX protease self-immunity 133 224 6.4E-17 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 NIAKO_RS17420 40d05d099881e5059db537466a7e4088 505 Pfam PF14322 Starch-binding associating with outer membrane 25 227 1.1E-20 T 23-04-2016 NIAKO_RS17420 40d05d099881e5059db537466a7e4088 505 Gene3D G3DSA:1.25.40.10 206 313 6.1E-46 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17420 40d05d099881e5059db537466a7e4088 505 Gene3D G3DSA:1.25.40.10 347 439 6.1E-46 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17420 40d05d099881e5059db537466a7e4088 505 SUPERFAMILY SSF48452 19 505 6.7E-110 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS17420 40d05d099881e5059db537466a7e4088 505 Pfam PF07980 SusD family 266 505 5.4E-29 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS01910 ff5ac40c6d370819cae0b604d72bee72 397 SUPERFAMILY SSF56059 264 335 3.88E-6 T 23-04-2016 NIAKO_RS01910 ff5ac40c6d370819cae0b604d72bee72 397 SUPERFAMILY SSF56059 48 154 3.88E-6 T 23-04-2016 NIAKO_RS33465 eaa6b9d0f8696e6675cd5dbede2448b1 163 PANTHER PTHR23028 36 163 4.0E-15 T 23-04-2016 NIAKO_RS33465 eaa6b9d0f8696e6675cd5dbede2448b1 163 Pfam PF01757 Acyltransferase family 36 143 8.7E-10 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NIAKO_RS36320 976e6e0f5ca9a1172b3d9f33e90202be 352 Pfam PF12412 Protein of unknown function (DUF3667) 28 72 1.7E-18 T 23-04-2016 IPR022134 Protein of unknown function DUF3667 NIAKO_RS06120 3ce6fba66a6d63e9c68f2fcb2e606cea 156 PIRSF PIRSF005859 1 156 3.7E-45 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06120 3ce6fba66a6d63e9c68f2fcb2e606cea 156 Pfam PF03073 TspO/MBR family 10 152 1.1E-44 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06120 3ce6fba66a6d63e9c68f2fcb2e606cea 156 PANTHER PTHR10057 3 155 1.5E-48 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06120 3ce6fba66a6d63e9c68f2fcb2e606cea 156 PANTHER PTHR10057:SF0 3 155 1.5E-48 T 23-04-2016 NIAKO_RS09320 61ec81d757e918f6eaffbddbad8e31fe 72 Pfam PF14086 Domain of unknown function (DUF4266) 23 72 3.0E-19 T 23-04-2016 IPR025362 Domain of unknown function DUF4266 NIAKO_RS10440 997d153da154eb37fbd0ca224098ee63 196 SUPERFAMILY SSF56925 60 191 1.52E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS10440 997d153da154eb37fbd0ca224098ee63 196 Gene3D G3DSA:2.40.160.20 57 171 2.3E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS08540 ab3ea797396ba72ba484b5b4054314f3 236 SUPERFAMILY SSF50044 30 73 6.41E-5 T 23-04-2016 IPR001452 SH3 domain GO:0005515 NIAKO_RS27455 065f11774c54dab50772137fc0714b5e 152 Pfam PF06170 Protein of unknown function (DUF983) 36 109 2.4E-5 T 23-04-2016 IPR009325 Protein of unknown function DUF983 NIAKO_RS12130 0447af6b6731005b1c2fe388ab3953e4 150 SUPERFAMILY SSF54593 7 145 2.6E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS12130 0447af6b6731005b1c2fe388ab3953e4 150 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 123 7.9E-9 T 23-04-2016 NIAKO_RS12130 0447af6b6731005b1c2fe388ab3953e4 150 Gene3D G3DSA:3.10.180.10 5 148 4.4E-48 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS25870 e8e98637d926372ea7fe14eeac9da986 931 Gene3D G3DSA:2.60.40.10 45 142 5.8E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS25870 e8e98637d926372ea7fe14eeac9da986 931 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 863 931 9.4E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS25870 e8e98637d926372ea7fe14eeac9da986 931 SUPERFAMILY SSF48726 41 142 3.03E-7 T 23-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 NIAKO_RS29505 886b72fc07219caec4e129afec047acf 74 SUPERFAMILY SSF47413 18 72 7.51E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS29505 886b72fc07219caec4e129afec047acf 74 Gene3D G3DSA:1.10.260.40 18 70 1.1E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NIAKO_RS17035 7fb6a93b634e6481b09018af1e1ce726 83 SMART SM00360 2 75 1.8E-14 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS17035 7fb6a93b634e6481b09018af1e1ce726 83 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 72 1.2E-13 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 NIAKO_RS17035 7fb6a93b634e6481b09018af1e1ce726 83 PANTHER PTHR24012 1 75 7.1E-15 T 23-04-2016 NIAKO_RS17035 7fb6a93b634e6481b09018af1e1ce726 83 Gene3D G3DSA:3.30.70.330 2 81 2.9E-18 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS17035 7fb6a93b634e6481b09018af1e1ce726 83 SUPERFAMILY SSF54928 2 81 1.36E-19 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NIAKO_RS35550 0b75fcefe709aa3387dce1c6f7b5817c 483 Pfam PF01435 Peptidase family M48 97 312 8.8E-12 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NIAKO_RS35550 0b75fcefe709aa3387dce1c6f7b5817c 483 Gene3D G3DSA:3.30.2010.10 91 163 3.0E-10 T 23-04-2016 NIAKO_RS33915 e7d62824ec1b49c40009d32ec113e0ab 215 PANTHER PTHR37298 5 215 1.6E-54 T 23-04-2016 NIAKO_RS33915 e7d62824ec1b49c40009d32ec113e0ab 215 Pfam PF01865 Protein of unknown function DUF47 17 213 1.8E-19 T 23-04-2016 IPR018445 Putative phosphate transport regulator NIAKO_RS12875 2c41c9ea99f24101c781b4adf4fcc513 211 PANTHER PTHR30086:SF7 2 211 7.4E-82 T 23-04-2016 NIAKO_RS12875 2c41c9ea99f24101c781b4adf4fcc513 211 PIRSF PIRSF006324 1 210 1.9E-48 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS12875 2c41c9ea99f24101c781b4adf4fcc513 211 PANTHER PTHR30086 2 211 7.4E-82 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS12875 2c41c9ea99f24101c781b4adf4fcc513 211 Pfam PF01810 LysE type translocator 17 208 1.5E-32 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NIAKO_RS08205 0448c3f122023c50513c7821f816ab48 532 SUPERFAMILY SSF51126 92 174 1.17E-14 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08205 0448c3f122023c50513c7821f816ab48 532 SUPERFAMILY SSF51126 283 462 1.17E-14 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS08205 0448c3f122023c50513c7821f816ab48 532 Gene3D G3DSA:2.160.20.10 276 430 1.6E-13 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS08205 0448c3f122023c50513c7821f816ab48 532 Gene3D G3DSA:2.160.20.10 100 194 1.6E-13 T 23-04-2016 IPR012334 Pectin lyase fold NIAKO_RS21795 e7847881ec22cc3d738f9df6aa524f5e 202 PANTHER PTHR14969 45 188 2.7E-14 T 23-04-2016 NIAKO_RS21795 e7847881ec22cc3d738f9df6aa524f5e 202 Gene3D G3DSA:1.20.144.10 15 194 2.9E-28 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS21795 e7847881ec22cc3d738f9df6aa524f5e 202 Pfam PF01569 PAP2 superfamily 73 195 4.9E-19 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS21795 e7847881ec22cc3d738f9df6aa524f5e 202 SUPERFAMILY SSF48317 9 195 3.53E-31 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS21795 e7847881ec22cc3d738f9df6aa524f5e 202 SMART SM00014 72 189 1.3E-7 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS21180 b9b378ee1899007338e44fd097cdde3a 111 SUPERFAMILY SSF54427 1 106 8.55E-13 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS21180 b9b378ee1899007338e44fd097cdde3a 111 Gene3D G3DSA:3.10.450.50 2 106 1.5E-9 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS34135 4243949e9199306ebc0a5142e7d7baa7 264 Pfam PF11306 Protein of unknown function (DUF3108) 31 251 5.5E-56 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 NIAKO_RS30935 3f1b74c7f20f9f5785b6da1d5e441132 209 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 139 209 3.7E-12 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS20155 c60c641cc8a841161b5077425a509503 202 SUPERFAMILY SSF49899 38 180 2.88E-11 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS20155 c60c641cc8a841161b5077425a509503 202 Gene3D G3DSA:2.60.120.200 35 185 5.4E-9 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain NIAKO_RS20155 c60c641cc8a841161b5077425a509503 202 PANTHER PTHR33681:SF4 1 199 1.6E-51 T 23-04-2016 NIAKO_RS20155 c60c641cc8a841161b5077425a509503 202 Pfam PF08787 Alginate lyase 18 192 2.5E-12 T 23-04-2016 IPR014895 Alginate lyase 2 NIAKO_RS20155 c60c641cc8a841161b5077425a509503 202 PANTHER PTHR33681 1 199 1.6E-51 T 23-04-2016 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 PANTHER PTHR30600 135 433 1.6E-60 T 23-04-2016 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 Gene3D G3DSA:1.10.760.10 135 269 1.1E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 SUPERFAMILY SSF46626 350 423 8.86E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 SUPERFAMILY SSF46626 255 321 8.86E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 SUPERFAMILY SSF46626 135 262 8.13E-35 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 Gene3D G3DSA:1.10.760.10 270 426 9.9E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 Pfam PF03150 Di-haem cytochrome c peroxidase 136 276 1.4E-39 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 NIAKO_RS15225 36a3ba38aa99354a87366e51ec4bea04 438 PANTHER PTHR30600:SF7 135 433 1.6E-60 T 23-04-2016 NIAKO_RS15600 a95a1cd1ecf74a5a8a6123c4496b2d79 132 SUPERFAMILY SSF52172 7 123 1.45E-8 T 23-04-2016 IPR011006 CheY-like superfamily NIAKO_RS15600 a95a1cd1ecf74a5a8a6123c4496b2d79 132 Gene3D G3DSA:3.40.50.2300 6 125 7.9E-6 T 23-04-2016 NIAKO_RS11605 bf91b4f49f09edcc3f714bcb6fadafe1 272 Gene3D G3DSA:3.40.50.150 113 211 7.2E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS11605 bf91b4f49f09edcc3f714bcb6fadafe1 272 SUPERFAMILY SSF53335 104 213 4.04E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS22680 be3e0636d1154fc67a8257de3c8fabab 147 PANTHER PTHR33452:SF3 1 141 3.0E-47 T 23-04-2016 NIAKO_RS22680 be3e0636d1154fc67a8257de3c8fabab 147 Pfam PF07681 DoxX 16 99 5.3E-11 T 23-04-2016 IPR032808 DoxX family NIAKO_RS22680 be3e0636d1154fc67a8257de3c8fabab 147 PANTHER PTHR33452 1 141 3.0E-47 T 23-04-2016 NIAKO_RS13620 4260e8ec4d6ae0aba0eddc742e68bd9d 83 Gene3D G3DSA:1.10.1200.10 5 74 1.4E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS13620 4260e8ec4d6ae0aba0eddc742e68bd9d 83 Pfam PF00550 Phosphopantetheine attachment site 7 71 3.6E-5 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS13620 4260e8ec4d6ae0aba0eddc742e68bd9d 83 SUPERFAMILY SSF47336 5 75 4.84E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain NIAKO_RS24995 ea9ca77a29c7523fc36d1f809eb7eedb 2367 Pfam PF14349 Motility related/secretion protein 61 341 9.7E-22 T 23-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain NIAKO_RS24995 ea9ca77a29c7523fc36d1f809eb7eedb 2367 Pfam PF14349 Motility related/secretion protein 1079 1583 5.2E-178 T 23-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain NIAKO_RS24995 ea9ca77a29c7523fc36d1f809eb7eedb 2367 TIGRFAM TIGR04189 surface_SprA: cell surface protein SprA 54 2365 0.0 T 23-04-2016 IPR026377 Cell surface SprA NIAKO_RS11910 2ba5d3374cc7a4cc98bb22f9cd02e1be 104 Gene3D G3DSA:2.120.10.30 12 91 2.1E-5 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS11910 2ba5d3374cc7a4cc98bb22f9cd02e1be 104 SUPERFAMILY SSF63829 12 102 1.26E-5 T 23-04-2016 NIAKO_RS11910 2ba5d3374cc7a4cc98bb22f9cd02e1be 104 Pfam PF07494 Two component regulator propeller 27 49 2.2E-5 T 23-04-2016 IPR011110 Two component regulator propeller NIAKO_RS07960 224946820ed7b683dbe9421ef5267c40 421 Pfam PF14362 Domain of unknown function (DUF4407) 41 333 1.1E-80 T 23-04-2016 IPR025519 Protein of unknown function DUF4407 NIAKO_RS10220 064f512588b140f49ae51702157cb4fd 184 Gene3D G3DSA:1.25.10.10 41 159 1.4E-4 T 23-04-2016 IPR011989 Armadillo-like helical NIAKO_RS10220 064f512588b140f49ae51702157cb4fd 184 SUPERFAMILY SSF48371 43 166 3.99E-7 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 NIAKO_RS08690 6ccecc6a0b4033996c2b0241441d67a2 253 Gene3D G3DSA:3.10.490.10 102 233 5.3E-5 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like NIAKO_RS02605 778f03f820360bb90c327fceffdc4bda 117 SUPERFAMILY SSF74650 10 92 3.45E-6 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NIAKO_RS37010 10c8779d3757d5b288855abbb3eb1b04 350 Pfam PF06580 Histidine kinase 166 244 7.9E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NIAKO_RS37010 10c8779d3757d5b288855abbb3eb1b04 350 PANTHER PTHR34220 12 349 3.6E-44 T 23-04-2016 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 Pfam PF14322 Starch-binding associating with outer membrane 21 232 6.5E-14 T 23-04-2016 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 SUPERFAMILY SSF48452 267 646 3.32E-109 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 SUPERFAMILY SSF48452 17 240 3.32E-109 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 Pfam PF07980 SusD family 327 646 1.9E-51 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 Gene3D G3DSA:1.25.40.10 386 387 4.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 Gene3D G3DSA:1.25.40.10 466 573 4.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS26525 87749b761dc9800f6b6e5fcf323a16f2 646 Gene3D G3DSA:1.25.40.10 214 342 4.8E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS29855 4e563955bd46f01371970190c37fb4a9 219 Gene3D G3DSA:2.40.160.20 58 206 1.8E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS23445 54c635550f46b598e18bc70b8e6009cf 218 Pfam PF09357 RteC protein 64 218 4.1E-41 T 23-04-2016 IPR018534 Tetracycline regulation of excision, RteC NIAKO_RS05510 f38e4c19354e74c621656d52bc3c4361 145 Gene3D G3DSA:3.30.530.20 2 142 9.4E-33 T 23-04-2016 IPR023393 START-like domain NIAKO_RS05510 f38e4c19354e74c621656d52bc3c4361 145 SUPERFAMILY SSF55961 6 142 3.14E-33 T 23-04-2016 NIAKO_RS05510 f38e4c19354e74c621656d52bc3c4361 145 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 140 3.3E-23 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS16395 f71e9d72c35fa5f9ff334eb811fbafb7 319 Gene3D G3DSA:1.20.144.10 98 305 6.7E-21 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS16395 f71e9d72c35fa5f9ff334eb811fbafb7 319 SUPERFAMILY SSF48317 95 290 1.44E-17 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIAKO_RS30465 1ed74da694092b7e8f4d175e98950f26 323 Pfam PF12081 GldM N-terminal domain 32 219 7.9E-9 T 23-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal NIAKO_RS36500 30ea7370af8ae4aca5905c813fd9bcef 279 SUPERFAMILY SSF56925 10 181 5.89E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS36500 30ea7370af8ae4aca5905c813fd9bcef 279 Gene3D G3DSA:2.40.160.20 35 72 3.6E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS08390 149630f0ecef9fb1619a31cf3e48f4cc 1043 Pfam PF13573 SprB repeat 644 678 4.6E-7 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS08390 149630f0ecef9fb1619a31cf3e48f4cc 1043 Pfam PF13573 SprB repeat 355 381 4.5E-5 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS08390 149630f0ecef9fb1619a31cf3e48f4cc 1043 Pfam PF13573 SprB repeat 721 754 1.6E-8 T 23-04-2016 IPR025667 SprB repeat NIAKO_RS34610 6f0250ec8b04b7bddcc95db10db324c4 497 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 459 3.1E-88 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 NIAKO_RS34610 6f0250ec8b04b7bddcc95db10db324c4 497 PANTHER PTHR33529:SF2 364 488 4.3E-70 T 23-04-2016 NIAKO_RS34610 6f0250ec8b04b7bddcc95db10db324c4 497 PANTHER PTHR33529:SF2 1 265 4.3E-70 T 23-04-2016 NIAKO_RS34610 6f0250ec8b04b7bddcc95db10db324c4 497 PANTHER PTHR33529 364 488 4.3E-70 T 23-04-2016 NIAKO_RS34610 6f0250ec8b04b7bddcc95db10db324c4 497 PANTHER PTHR33529 1 265 4.3E-70 T 23-04-2016 NIAKO_RS02465 541c779c135c72a933818a078eb36064 296 Gene3D G3DSA:3.40.50.720 1 234 4.2E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02465 541c779c135c72a933818a078eb36064 296 SUPERFAMILY SSF51735 1 289 8.56E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS02465 541c779c135c72a933818a078eb36064 296 PANTHER PTHR10366 2 290 1.4E-97 T 23-04-2016 NIAKO_RS02465 541c779c135c72a933818a078eb36064 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 73 1.4E-12 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NIAKO_RS02465 541c779c135c72a933818a078eb36064 296 PANTHER PTHR10366:SF475 2 290 1.4E-97 T 23-04-2016 NIAKO_RS08915 44339f4eb0c7875568785b798b0adad4 134 Pfam PF13564 DoxX-like family 10 108 6.5E-20 T 23-04-2016 IPR032808 DoxX family NIAKO_RS08915 44339f4eb0c7875568785b798b0adad4 134 PIRSF PIRSF030066 1 132 5.2E-30 T 23-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 NIAKO_RS34720 c26f63561d143a9ccf828b40832446bf 399 Pfam PF02687 FtsX-like permease family 282 386 5.4E-6 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS18070 8a3e3a2ed1500c39b7d2d81521b05d30 328 Pfam PF04443 Acyl-protein synthetase, LuxE 18 324 1.0E-10 T 23-04-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 NIAKO_RS18070 8a3e3a2ed1500c39b7d2d81521b05d30 328 SUPERFAMILY SSF56801 212 315 5.1E-6 T 23-04-2016 NIAKO_RS04570 2ac53e226ee06fa83ca40579efa63501 181 Gene3D G3DSA:3.10.450.50 43 179 8.8E-10 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS04570 2ac53e226ee06fa83ca40579efa63501 181 SUPERFAMILY SSF54427 43 179 1.07E-13 T 23-04-2016 IPR032710 NTF2-like domain NIAKO_RS07850 6ee0ee151d9fa40b9b0db58260c0562e 288 SUPERFAMILY SSF52402 175 282 8.37E-7 T 23-04-2016 NIAKO_RS07850 6ee0ee151d9fa40b9b0db58260c0562e 288 SUPERFAMILY SSF52402 11 122 6.87E-12 T 23-04-2016 NIAKO_RS07850 6ee0ee151d9fa40b9b0db58260c0562e 288 Gene3D G3DSA:3.40.50.620 6 122 8.0E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS07850 6ee0ee151d9fa40b9b0db58260c0562e 288 Pfam PF00582 Universal stress protein family 12 122 1.7E-8 T 23-04-2016 IPR006016 UspA GO:0006950 NIAKO_RS03015 526f7ce762d56b5462128e2765b45355 244 Pfam PF12099 Protein of unknown function (DUF3575) 55 195 1.9E-7 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS10530 d96e18e9e85f949fc6fe0df9ef75bb64 242 Gene3D G3DSA:2.40.160.60 117 199 4.9E-4 T 23-04-2016 NIAKO_RS10530 d96e18e9e85f949fc6fe0df9ef75bb64 242 Gene3D G3DSA:2.40.160.60 30 73 4.9E-4 T 23-04-2016 NIAKO_RS10530 d96e18e9e85f949fc6fe0df9ef75bb64 242 Pfam PF13568 Outer membrane protein beta-barrel domain 41 207 1.3E-10 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS26305 a920a5c633cd98537df7d22830e798c4 319 SUPERFAMILY SSF53383 203 315 3.29E-11 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS26305 a920a5c633cd98537df7d22830e798c4 319 SUPERFAMILY SSF53383 25 171 3.29E-11 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NIAKO_RS15160 8d2a33f01826891e3055cdcb04a65b19 555 Pfam PF16407 PKD-like family 28 197 6.8E-20 T 23-04-2016 IPR032183 PKD-like family NIAKO_RS26495 344febc6a9a77d8f9fafa1a74e19dceb 217 Pfam PF06439 Domain of Unknown Function (DUF1080) 21 215 2.2E-39 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS15470 d47d850862f9fd02d87628c626e55188 148 SUPERFAMILY SSF55961 18 138 5.89E-12 T 23-04-2016 NIAKO_RS15470 d47d850862f9fd02d87628c626e55188 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 25 136 3.6E-8 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS15470 d47d850862f9fd02d87628c626e55188 148 Gene3D G3DSA:3.30.530.20 23 140 5.0E-12 T 23-04-2016 IPR023393 START-like domain NIAKO_RS17190 431dad2b13b32137893eaaacf594777f 380 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 93 278 9.7E-13 T 23-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NIAKO_RS17190 431dad2b13b32137893eaaacf594777f 380 SUPERFAMILY SSF51445 64 353 9.67E-33 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily NIAKO_RS17190 431dad2b13b32137893eaaacf594777f 380 Gene3D G3DSA:3.20.20.80 78 345 2.5E-27 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NIAKO_RS22380 8f0bd767ed098e736ccc6ade2e5b2cd3 213 SUPERFAMILY SSF49464 32 92 1.03E-9 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain NIAKO_RS22380 8f0bd767ed098e736ccc6ade2e5b2cd3 213 Gene3D G3DSA:2.60.40.1120 33 92 3.2E-7 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS22380 8f0bd767ed098e736ccc6ade2e5b2cd3 213 Pfam PF13715 CarboxypepD_reg-like domain 34 103 1.0E-10 T 23-04-2016 NIAKO_RS00785 596effe3676eff130a06c3a9d696472e 267 Pfam PF06439 Domain of Unknown Function (DUF1080) 34 264 8.0E-37 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS07380 10a33189759c7ab0cdacf1072b22702a 365 Pfam PF05117 Family of unknown function (DUF695) 240 358 1.8E-20 T 23-04-2016 IPR016097 Domain of unknown function DUF695 NIAKO_RS01640 bf70dab6b9d7aac0b64a2b03c29d7765 747 Pfam PF16314 Domain of unknown function (DUF4954) 42 735 7.5E-140 T 23-04-2016 IPR032533 Protein of unknown function DUF4954 NIAKO_RS01640 bf70dab6b9d7aac0b64a2b03c29d7765 747 Gene3D G3DSA:2.160.10.10 266 382 9.8E-11 T 23-04-2016 NIAKO_RS01640 bf70dab6b9d7aac0b64a2b03c29d7765 747 SUPERFAMILY SSF51161 226 286 8.78E-6 T 23-04-2016 IPR011004 Trimeric LpxA-like NIAKO_RS29130 adbe11a98231e6d09713359c8b874c5e 352 PANTHER PTHR37841 11 183 3.1E-19 T 23-04-2016 NIAKO_RS29130 adbe11a98231e6d09713359c8b874c5e 352 Pfam PF14903 WG containing repeat 153 175 0.014 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS29130 adbe11a98231e6d09713359c8b874c5e 352 Pfam PF14903 WG containing repeat 19 46 3.6E-4 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS29130 adbe11a98231e6d09713359c8b874c5e 352 Pfam PF14903 WG containing repeat 84 114 2.9E-9 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS29130 adbe11a98231e6d09713359c8b874c5e 352 Pfam PF14903 WG containing repeat 50 84 0.0023 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS02305 86be29d2598c8292d671a536c387828a 95 Pfam PF05488 PAAR motif 18 85 5.5E-25 T 23-04-2016 IPR008727 PAAR motif NIAKO_RS27540 2eb3b0a38261c75d6ab3d5af7b8e1126 96 SUPERFAMILY SSF102829 7 84 3.79E-9 T 23-04-2016 IPR007838 Cell division protein ZapA-like NIAKO_RS27540 2eb3b0a38261c75d6ab3d5af7b8e1126 96 Pfam PF05164 Cell division protein ZapA 7 91 1.1E-10 T 23-04-2016 IPR007838 Cell division protein ZapA-like NIAKO_RS25735 d37f95619729bf37b8d36d6c419f1477 458 Pfam PF16401 Domain of unknown function (DUF5009) 1 255 3.8E-136 T 23-04-2016 IPR032176 Domain of unknown function DUF5009 NIAKO_RS32730 1bdb33039f394f050843ba4f38c65b2d 98 Pfam PF04977 Septum formation initiator 36 96 4.9E-8 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 NIAKO_RS17445 5daef7ce6f90caac3072888330ccb21f 294 Pfam PF16409 Domain of unknown function (DUF5017) 16 188 6.2E-67 T 23-04-2016 IPR032185 Domain of unknown function DUF5017 NIAKO_RS35555 7bb31c08250ccd5259acba3a293b75b1 149 SUPERFAMILY SSF160574 26 139 2.49E-7 T 23-04-2016 NIAKO_RS06255 5894ccfd72ac3945be6dba6d699d4230 162 Pfam PF12867 DinB superfamily 24 151 9.3E-10 T 23-04-2016 IPR024775 DinB-like domain NIAKO_RS06255 5894ccfd72ac3945be6dba6d699d4230 162 Gene3D G3DSA:1.20.120.450 23 159 3.4E-6 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS06255 5894ccfd72ac3945be6dba6d699d4230 162 SUPERFAMILY SSF109854 23 159 1.45E-15 T 23-04-2016 NIAKO_RS13660 bb07ddcd2e8b51560ca4bc1724241fee 442 Gene3D G3DSA:1.25.40.10 313 399 2.0E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13660 bb07ddcd2e8b51560ca4bc1724241fee 442 SUPERFAMILY SSF48452 29 439 3.79E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS13660 bb07ddcd2e8b51560ca4bc1724241fee 442 Pfam PF07980 SusD family 248 417 3.6E-16 T 23-04-2016 IPR012944 RagB/SusD domain NIAKO_RS16005 4895b6272c3fa2fdf59d9810d0a3090b 244 SUPERFAMILY SSF52317 3 237 4.73E-12 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS16005 4895b6272c3fa2fdf59d9810d0a3090b 244 Pfam PF03575 Peptidase family S51 3 234 3.7E-23 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 NIAKO_RS16005 4895b6272c3fa2fdf59d9810d0a3090b 244 Gene3D G3DSA:3.40.50.880 1 242 2.1E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like NIAKO_RS22765 0a033ddb3d3fe7039ebf8838ff357263 83 Gene3D G3DSA:3.40.50.1820 1 68 3.1E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS22765 0a033ddb3d3fe7039ebf8838ff357263 83 SUPERFAMILY SSF53474 1 45 2.27E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold NIAKO_RS01990 3e656033319ec1208a65d8e51aca07cf 183 Gene3D G3DSA:1.20.120.450 10 151 4.9E-13 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS01990 3e656033319ec1208a65d8e51aca07cf 183 SUPERFAMILY SSF109854 11 151 8.7E-22 T 23-04-2016 NIAKO_RS01990 3e656033319ec1208a65d8e51aca07cf 183 Pfam PF07609 Protein of unknown function (DUF1572) 6 166 7.9E-70 T 23-04-2016 IPR011466 Protein of unknown function DUF1572 NIAKO_RS19755 d1aef08d74c5d5e473b0e04c6db769e8 186 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 35 44 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 NIAKO_RS32350 5f146e0cf0ca6a6aa15036c28fb3f083 195 Pfam PF04336 Protein of unknown function, DUF479 81 185 4.7E-28 T 23-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 NIAKO_RS32350 5f146e0cf0ca6a6aa15036c28fb3f083 195 PIRSF PIRSF011489 1 194 5.7E-50 T 23-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 NIAKO_RS32350 5f146e0cf0ca6a6aa15036c28fb3f083 195 PANTHER PTHR38764:SF1 2 195 1.6E-46 T 23-04-2016 NIAKO_RS32350 5f146e0cf0ca6a6aa15036c28fb3f083 195 PANTHER PTHR38764 2 195 1.6E-46 T 23-04-2016 NIAKO_RS33820 75118a4926e8a60f32b314c6ac9e2176 128 Gene3D G3DSA:2.60.40.1470 4 125 2.3E-42 T 23-04-2016 IPR007474 ApaG domain NIAKO_RS33820 75118a4926e8a60f32b314c6ac9e2176 128 Pfam PF04379 Protein of unknown function (DUF525) 20 104 1.9E-32 T 23-04-2016 IPR007474 ApaG domain NIAKO_RS33820 75118a4926e8a60f32b314c6ac9e2176 128 SUPERFAMILY SSF110069 5 127 1.96E-43 T 23-04-2016 IPR007474 ApaG domain NIAKO_RS33820 75118a4926e8a60f32b314c6ac9e2176 128 PANTHER PTHR14289 7 119 1.5E-36 T 23-04-2016 NIAKO_RS21220 110cff7795f50447d092e218241753b0 151 Pfam PF00293 NUDIX domain 3 133 1.4E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NIAKO_RS21220 110cff7795f50447d092e218241753b0 151 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NIAKO_RS21220 110cff7795f50447d092e218241753b0 151 SUPERFAMILY SSF55811 4 146 1.76E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS21220 110cff7795f50447d092e218241753b0 151 Gene3D G3DSA:3.90.79.10 3 148 7.8E-19 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NIAKO_RS10485 44f18dd3c5b8d487f0504d58467f8c6a 375 Gene3D G3DSA:2.40.160.60 324 358 3.8E-4 T 23-04-2016 NIAKO_RS17650 61f2150d957dd09b378ed6591784bc8d 456 Pfam PF01758 Sodium Bile acid symporter family 91 229 4.1E-27 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS17650 61f2150d957dd09b378ed6591784bc8d 456 PANTHER PTHR10361 296 420 5.3E-50 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS17650 61f2150d957dd09b378ed6591784bc8d 456 PANTHER PTHR10361 59 231 5.3E-50 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NIAKO_RS30425 38d0b7c91bbd1e164731eb40d152b27f 172 Gene3D G3DSA:3.30.420.10 2 112 2.0E-11 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS30425 38d0b7c91bbd1e164731eb40d152b27f 172 Pfam PF16473 3' exoribonuclease, RNase T-like 3 160 3.5E-9 T 23-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain NIAKO_RS30425 38d0b7c91bbd1e164731eb40d152b27f 172 SUPERFAMILY SSF53098 2 165 1.2E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NIAKO_RS06165 d723fc73b885c3ebc48e2474a9ab4634 156 PIRSF PIRSF005859 1 156 3.9E-47 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06165 d723fc73b885c3ebc48e2474a9ab4634 156 Pfam PF03073 TspO/MBR family 10 152 1.7E-45 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06165 d723fc73b885c3ebc48e2474a9ab4634 156 PANTHER PTHR10057 3 155 2.4E-51 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 NIAKO_RS06165 d723fc73b885c3ebc48e2474a9ab4634 156 PANTHER PTHR10057:SF0 3 155 2.4E-51 T 23-04-2016 NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 SUPERFAMILY SSF52540 25 163 3.28E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 Pfam PF13555 P-loop containing region of AAA domain 17 78 4.2E-19 T 23-04-2016 NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 SUPERFAMILY SSF52540 23 67 2.92E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 SUPERFAMILY SSF52540 903 1093 2.92E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 Gene3D G3DSA:3.40.1140.10 1018 1097 1.7E-8 T 23-04-2016 NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 Gene3D G3DSA:3.40.1140.10 15 240 6.1E-23 T 23-04-2016 NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 Gene3D G3DSA:3.40.1140.10 552 561 1.7E-8 T 23-04-2016 NIAKO_RS29825 b8d9522810734cb4b6e9cf29eb44ca9b 1137 Pfam PF13558 Putative exonuclease SbcCD, C subunit 987 1077 1.8E-22 T 23-04-2016 NIAKO_RS03055 b3aa70552a2f5113002bdc75f227515a 413 SUPERFAMILY SSF50998 86 203 1.96E-12 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS03055 b3aa70552a2f5113002bdc75f227515a 413 SUPERFAMILY SSF50998 260 383 1.96E-12 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIAKO_RS03055 b3aa70552a2f5113002bdc75f227515a 413 Gene3D G3DSA:2.140.10.10 255 384 1.1E-6 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain NIAKO_RS12365 5c4f6d44f8068bfe06a0a408aaaa19d5 406 Pfam PF01103 Surface antigen 104 376 1.5E-7 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NIAKO_RS27555 19543689e05c0da8d66469c149d5bf3b 79 Pfam PF02416 mttA/Hcf106 family 14 58 7.5E-12 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 NIAKO_RS15805 a18a37435323c6e8ec32aca2ccab9057 132 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 58 128 9.0E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS08335 71a5d973154f6945873b8e3406c10ab1 88 Pfam PF13585 C-terminal domain of CHU protein family 50 85 3.7E-8 T 23-04-2016 NIAKO_RS30905 84a2757b04b7e4c24ab6008c3caf848c 165 Pfam PF03724 META domain 52 146 5.5E-17 T 23-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ NIAKO_RS00400 0fdcd548a09c534d2701fdd19a92e481 489 Pfam PF01943 Polysaccharide biosynthesis protein 17 288 1.5E-8 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS30225 5a8dbe927ecd55953a9a5817434e4b45 363 Pfam PF14130 Domain of unknown function (DUF4297) 9 217 9.7E-12 T 23-04-2016 IPR025382 Domain of unknown function DUF4297 NIAKO_RS37410 640f8791af73bb5765338b8c791e0af1 152 SUPERFAMILY SSF160574 33 143 3.27E-10 T 23-04-2016 NIAKO_RS28080 81e9efbb849f67caf5310a409147fa65 310 Pfam PF11276 Protein of unknown function (DUF3078) 58 148 4.1E-25 T 23-04-2016 IPR021428 Protein of unknown function DUF3078 NIAKO_RS35125 583b61b3c3946e58344a6a0b5d4bea8c 318 Pfam PF07485 Domain of Unknown Function (DUF1259) 193 310 2.0E-44 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NIAKO_RS35125 583b61b3c3946e58344a6a0b5d4bea8c 318 Pfam PF07485 Domain of Unknown Function (DUF1259) 50 167 1.1E-39 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NIAKO_RS10225 73a7bc93f42b22731a92465ba7bff284 238 PANTHER PTHR39186 6 238 4.2E-35 T 23-04-2016 NIAKO_RS10225 73a7bc93f42b22731a92465ba7bff284 238 PANTHER PTHR39186:SF1 6 238 4.2E-35 T 23-04-2016 NIAKO_RS10225 73a7bc93f42b22731a92465ba7bff284 238 Pfam PF09844 Uncharacterized conserved protein (COG2071) 9 229 1.3E-58 T 23-04-2016 IPR018644 Protein of unknown function DUF2071 NIAKO_RS30235 98032d048882e314975272b92f719ccd 125 SUPERFAMILY SSF89946 19 118 2.22E-10 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain NIAKO_RS30235 98032d048882e314975272b92f719ccd 125 Pfam PF06877 Regulator of ribonuclease activity B 22 119 8.5E-15 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain NIAKO_RS30235 98032d048882e314975272b92f719ccd 125 Gene3D G3DSA:3.30.70.970 19 114 5.6E-4 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain NIAKO_RS14665 8da04759b412b33ffe66ec77c70b62ee 317 Pfam PF16409 Domain of unknown function (DUF5017) 17 194 1.2E-51 T 23-04-2016 IPR032185 Domain of unknown function DUF5017 NIAKO_RS20070 defda94a028c231e3f1398bfb57d457c 191 Pfam PF16344 Domain of unknown function (DUF4974) 116 178 3.5E-11 T 23-04-2016 IPR032508 Protein FecR, C-terminal NIAKO_RS36465 9bd7cf33e8a3bd9187ddb478d4b20ba0 146 Pfam PF14373 Superinfection immunity protein 25 66 6.0E-20 T 23-04-2016 IPR016410 Bacteriophage-associated immunity protein NIAKO_RS36465 9bd7cf33e8a3bd9187ddb478d4b20ba0 146 Pfam PF09851 Short C-terminal domain 118 144 2.1E-7 T 23-04-2016 IPR018649 SHOCT domain NIAKO_RS36465 9bd7cf33e8a3bd9187ddb478d4b20ba0 146 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 26 65 5.0E-9 T 23-04-2016 IPR016410 Bacteriophage-associated immunity protein NIAKO_RS26755 0c90e8a1f94216b5294233551551f5fc 237 Pfam PF14243 Domain of unknown function (DUF4343) 102 227 7.1E-28 T 23-04-2016 IPR025643 Protein of unknown function DUF4343 NIAKO_RS28550 c62665ea2ee47dd0ba2cc9a3f6599b5e 464 SUPERFAMILY SSF51126 164 406 2.73E-9 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor NIAKO_RS06955 2eb79d4305893c84131014faaa03c1ed 280 PANTHER PTHR39335 41 148 7.4E-24 T 23-04-2016 NIAKO_RS06955 2eb79d4305893c84131014faaa03c1ed 280 Pfam PF03640 Secreted repeat of unknown function 43 79 5.7E-10 T 23-04-2016 IPR005297 Lipoprotein repeat NIAKO_RS06955 2eb79d4305893c84131014faaa03c1ed 280 Pfam PF03640 Secreted repeat of unknown function 233 271 5.0E-6 T 23-04-2016 IPR005297 Lipoprotein repeat NIAKO_RS06955 2eb79d4305893c84131014faaa03c1ed 280 Pfam PF03640 Secreted repeat of unknown function 98 140 9.5E-15 T 23-04-2016 IPR005297 Lipoprotein repeat NIAKO_RS36185 f648d70d5bfd9527bea1ac79185b456e 273 Gene3D G3DSA:2.60.40.10 110 190 9.8E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS36185 f648d70d5bfd9527bea1ac79185b456e 273 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 204 272 1.3E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS08795 fd699b335cd5e3a8c5746a12083d8ba8 290 Pfam PF14054 Domain of unknown function (DUF4249) 7 286 6.3E-43 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS32095 68a4c73455a933a19c767e4eff1510fb 164 Pfam PF04143 Sulphur transport 56 155 3.0E-10 T 23-04-2016 IPR007272 Sulphur transport domain NIAKO_RS32095 68a4c73455a933a19c767e4eff1510fb 164 PANTHER PTHR30574:SF7 32 157 1.9E-32 T 23-04-2016 NIAKO_RS32095 68a4c73455a933a19c767e4eff1510fb 164 PANTHER PTHR30574 32 157 1.9E-32 T 23-04-2016 NIAKO_RS23370 b809dcc5ed16293ecc34335a968c21b3 64 Pfam PF03050 Transposase IS66 family 2 62 2.0E-12 T 23-04-2016 IPR004291 Transposase, IS66 NIAKO_RS21185 a131044a1ef6f571449c6916eff33366 98 Gene3D G3DSA:3.40.50.720 36 84 6.0E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS21185 a131044a1ef6f571449c6916eff33366 98 SUPERFAMILY SSF51735 36 75 1.83E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain NIAKO_RS36965 4f31b6c0044fc1658f07d33dc2d2ca53 115 Gene3D G3DSA:3.10.180.10 37 106 1.6E-8 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS36965 4f31b6c0044fc1658f07d33dc2d2ca53 115 SUPERFAMILY SSF54593 35 96 1.41E-8 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIAKO_RS18005 2296e0255b0079a34f1de8478c3aa343 364 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 3 360 2.9E-60 T 23-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 NIAKO_RS33435 2cd17323721316c38f775e59535ce842 378 Pfam PF14054 Domain of unknown function (DUF4249) 6 305 7.0E-51 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS08330 4abc5554b31aa3885ed7987dd4a78c6e 207 SUPERFAMILY SSF53335 30 193 2.95E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS08330 4abc5554b31aa3885ed7987dd4a78c6e 207 Gene3D G3DSA:3.40.50.150 27 194 1.8E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS08330 4abc5554b31aa3885ed7987dd4a78c6e 207 Pfam PF13489 Methyltransferase domain 36 181 1.1E-10 T 23-04-2016 NIAKO_RS26185 8d864305c6406a52a0744f02932b1888 70 Pfam PF12732 YtxH-like protein 9 64 7.1E-15 T 23-04-2016 IPR024623 Uncharacterised protein family YtxH NIAKO_RS04315 07d91d6bafbe45c31b468cf93bbdbd02 697 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 621 697 7.7E-14 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS04315 07d91d6bafbe45c31b468cf93bbdbd02 697 Pfam PF05572 Pregnancy-associated plasma protein-A 159 301 8.5E-18 T 23-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 NIAKO_RS04315 07d91d6bafbe45c31b468cf93bbdbd02 697 SUPERFAMILY SSF55486 115 286 1.14E-10 T 23-04-2016 NIAKO_RS04315 07d91d6bafbe45c31b468cf93bbdbd02 697 PANTHER PTHR19325 144 297 1.5E-20 T 23-04-2016 NIAKO_RS04315 07d91d6bafbe45c31b468cf93bbdbd02 697 PANTHER PTHR19325:SF359 144 297 1.5E-20 T 23-04-2016 NIAKO_RS19380 d6ef9f80fef3cf58bcd04e7872f7a633 163 SUPERFAMILY SSF109854 1 157 1.02E-32 T 23-04-2016 NIAKO_RS19380 d6ef9f80fef3cf58bcd04e7872f7a633 163 Gene3D G3DSA:1.20.120.450 2 149 2.1E-25 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NIAKO_RS19380 d6ef9f80fef3cf58bcd04e7872f7a633 163 Pfam PF05163 DinB family 6 161 5.9E-12 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB NIAKO_RS20355 b4de016f068e18d6cf38d32e24241778 228 PANTHER PTHR31851 2 228 1.1E-93 T 23-04-2016 NIAKO_RS20355 b4de016f068e18d6cf38d32e24241778 228 Pfam PF01988 VIT family 15 224 4.4E-69 T 23-04-2016 IPR008217 Ccc1 family NIAKO_RS20355 b4de016f068e18d6cf38d32e24241778 228 PANTHER PTHR31851:SF11 2 228 1.1E-93 T 23-04-2016 NIAKO_RS30490 37da9a1c770bf8864b31af58c4332698 164 Pfam PF06271 RDD family 23 144 2.1E-12 T 23-04-2016 IPR010432 RDD NIAKO_RS28970 8ef9175ebc8b6ec54547654ec56e11c6 530 Gene3D G3DSA:3.40.50.150 239 368 4.8E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS28970 8ef9175ebc8b6ec54547654ec56e11c6 530 Gene3D G3DSA:3.40.50.150 436 482 4.8E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS28970 8ef9175ebc8b6ec54547654ec56e11c6 530 SUPERFAMILY SSF53335 234 376 1.34E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS28970 8ef9175ebc8b6ec54547654ec56e11c6 530 SUPERFAMILY SSF53335 455 500 1.34E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS16540 d898f83d9fa2d3ed0b12f5c57198adcb 133 Pfam PF13564 DoxX-like family 17 118 4.0E-17 T 23-04-2016 IPR032808 DoxX family NIAKO_RS07710 108c25808520644f187f0432250b51c1 110 PANTHER PTHR38482 1 108 5.0E-48 T 23-04-2016 NIAKO_RS07710 108c25808520644f187f0432250b51c1 110 PIRSF PIRSF021239 1 110 1.2E-48 T 23-04-2016 IPR007437 Putative member of DMT superfamily NIAKO_RS07710 108c25808520644f187f0432250b51c1 110 Pfam PF04342 Putative member of DMT superfamily (DUF486) 3 107 1.4E-46 T 23-04-2016 IPR007437 Putative member of DMT superfamily NIAKO_RS04695 13cf9be8c05fdc81df1ccd384bb822bb 580 Pfam PF13568 Outer membrane protein beta-barrel domain 357 552 4.3E-7 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS10115 ea30640d3bce08c7921869b2345bd664 293 Pfam PF14257 Domain of unknown function (DUF4349) 39 277 6.1E-59 T 23-04-2016 IPR025645 Domain of unknown function DUF4349 NIAKO_RS02010 8cd55eb7d30a585f80dcdd57563d16a0 579 Pfam PF00474 Sodium:solute symporter family 35 308 8.0E-24 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS02010 8cd55eb7d30a585f80dcdd57563d16a0 579 Pfam PF00474 Sodium:solute symporter family 397 527 4.0E-10 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS02010 8cd55eb7d30a585f80dcdd57563d16a0 579 PANTHER PTHR11819 4 304 1.2E-83 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS02010 8cd55eb7d30a585f80dcdd57563d16a0 579 PANTHER PTHR11819 385 557 1.2E-83 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NIAKO_RS14060 50de79c75ac33911462c31b6ae300cf1 864 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 391 421 4.6E-4 T 23-04-2016 IPR006530 YD repeat NIAKO_RS23615 d530ea46a058904c2b43dbda257f74a7 225 SUPERFAMILY SSF53597 1 221 8.64E-31 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS23615 d530ea46a058904c2b43dbda257f74a7 225 Gene3D G3DSA:3.40.430.10 2 221 2.1E-33 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS23615 d530ea46a058904c2b43dbda257f74a7 225 Pfam PF01872 RibD C-terminal domain 2 215 2.7E-18 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NIAKO_RS08215 cda96b1a0db399d3e3b6fc16ccdbf92b 359 SUPERFAMILY SSF48208 180 336 1.7E-13 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NIAKO_RS08215 cda96b1a0db399d3e3b6fc16ccdbf92b 359 Gene3D G3DSA:1.50.10.10 192 330 4.3E-7 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NIAKO_RS08685 362ba35245804f2cb9b52f6e7e4c96bd 477 Pfam PF14082 Domain of unknown function (DUF4263) 284 443 1.9E-31 T 23-04-2016 IPR025359 Protein of unknown function DUF4263 NIAKO_RS04460 87baaec7b04dfeba9fc33fc66b349a10 283 Pfam PF12864 Protein of unknown function (DUF3822) 16 250 5.6E-39 T 23-04-2016 IPR024213 Protein of unknown function DUF3822 NIAKO_RS31485 1a13cd0bd0703682839d878a0a38b4f8 165 Pfam PF04972 BON domain 27 91 1.7E-13 T 23-04-2016 IPR007055 BON domain NIAKO_RS31485 1a13cd0bd0703682839d878a0a38b4f8 165 Pfam PF04972 BON domain 106 143 4.5E-6 T 23-04-2016 IPR007055 BON domain NIAKO_RS31880 2c6936c0665ac14e625b684adf3b6f25 153 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 27 106 7.0E-12 T 23-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 NIAKO_RS17135 f71a131c05b48f05878f93edc006b90e 143 Pfam PF06170 Protein of unknown function (DUF983) 38 123 3.2E-6 T 23-04-2016 IPR009325 Protein of unknown function DUF983 NIAKO_RS28375 c9ba41149b6e0af2df65b2eea7b014d6 260 SUPERFAMILY SSF101898 13 219 2.3E-8 T 23-04-2016 NIAKO_RS28375 c9ba41149b6e0af2df65b2eea7b014d6 260 Gene3D G3DSA:2.120.10.30 15 195 1.1E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS28375 c9ba41149b6e0af2df65b2eea7b014d6 260 Gene3D G3DSA:2.120.10.30 233 258 1.1E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS32120 2f945eaf37461adf9e96f189a60dcb0d 749 Gene3D G3DSA:3.40.1090.10 371 521 2.0E-4 T 23-04-2016 NIAKO_RS32120 2f945eaf37461adf9e96f189a60dcb0d 749 SUPERFAMILY SSF52151 361 613 4.45E-6 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NIAKO_RS12435 fbd78f55dfbf051a8f73acbf18c34187 167 Pfam PF04493 Endonuclease V 2 116 1.3E-8 T 23-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 NIAKO_RS35685 511ec6cd0d3d8a719e7b1a5a83890e23 341 Gene3D G3DSA:2.40.128.140 26 333 1.6E-49 T 23-04-2016 NIAKO_RS35685 511ec6cd0d3d8a719e7b1a5a83890e23 341 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 38 338 7.0E-64 T 23-04-2016 IPR018707 Protein of unknown function DUF2219 NIAKO_RS02430 886c31ae7e9c0f8d660d74329837d42f 731 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 653 731 1.5E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS20880 0a6c7e525b675257eefb6b21c8890fcc 382 Gene3D G3DSA:2.120.10.30 191 366 5.8E-22 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS20880 0a6c7e525b675257eefb6b21c8890fcc 382 Gene3D G3DSA:2.120.10.30 44 113 5.8E-22 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NIAKO_RS20880 0a6c7e525b675257eefb6b21c8890fcc 382 SUPERFAMILY SSF101898 41 366 1.02E-21 T 23-04-2016 NIAKO_RS37370 cebd7190e7e193a2d888550490a1db8b 185 Gene3D G3DSA:3.90.550.10 2 58 3.0E-6 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS37370 cebd7190e7e193a2d888550490a1db8b 185 SUPERFAMILY SSF53448 2 59 1.13E-7 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NIAKO_RS19495 a7dd099b725180ca932c8bd876e55e4b 348 Pfam PF14054 Domain of unknown function (DUF4249) 14 339 1.4E-47 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS00755 c3144b7f1d24669938473c56b6881f38 76 Pfam PF09720 Putative addiction module component 37 67 2.5E-7 T 23-04-2016 IPR013406 Conserved hypothetical protein CHP02574, addiction module NIAKO_RS08600 82f985698e9ac1fa95c86865980bdb6c 230 Gene3D G3DSA:2.30.180.10 173 218 9.4E-6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS08600 82f985698e9ac1fa95c86865980bdb6c 230 Gene3D G3DSA:2.30.180.10 40 135 9.4E-6 T 23-04-2016 IPR000782 FAS1 domain NIAKO_RS36615 299d7ac6fd54c0c473ff143acaf3f8b9 78 Pfam PF16861 Carbamoyltransferase C-terminus 1 74 6.5E-29 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal NIAKO_RS36615 299d7ac6fd54c0c473ff143acaf3f8b9 78 PANTHER PTHR34847 1 77 3.3E-23 T 23-04-2016 NIAKO_RS11260 4f6d148075c52cce45aeac9955546650 209 Pfam PF00156 Phosphoribosyl transferase domain 6 189 1.2E-25 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NIAKO_RS11260 4f6d148075c52cce45aeac9955546650 209 PANTHER PTHR31299 1 208 6.3E-65 T 23-04-2016 NIAKO_RS11260 4f6d148075c52cce45aeac9955546650 209 Gene3D G3DSA:3.40.50.2020 2 196 3.1E-33 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS11260 4f6d148075c52cce45aeac9955546650 209 SUPERFAMILY SSF53271 1 203 6.95E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like NIAKO_RS13560 b45ccd990c6b6fde8aa5e0d3d5b5c795 295 Pfam PF14257 Domain of unknown function (DUF4349) 58 279 2.0E-21 T 23-04-2016 IPR025645 Domain of unknown function DUF4349 NIAKO_RS27915 55207bb907eba2bb275d16b8477245a5 171 Pfam PF14347 Domain of unknown function (DUF4399) 81 171 2.1E-28 T 23-04-2016 IPR025512 Domain of unknown function DUF4399 NIAKO_RS33185 3158156120537b1d9f3eede3d4c4621c 372 SUPERFAMILY SSF56300 59 193 4.81E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33185 3158156120537b1d9f3eede3d4c4621c 372 SUPERFAMILY SSF56300 237 266 4.81E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33185 3158156120537b1d9f3eede3d4c4621c 372 Gene3D G3DSA:3.60.21.10 59 193 8.3E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS33185 3158156120537b1d9f3eede3d4c4621c 372 Gene3D G3DSA:3.60.21.10 237 290 8.3E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like NIAKO_RS01500 e7f2800603d099d09669c4c2b56111a0 233 Gene3D G3DSA:2.60.120.260 67 178 3.5E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS22285 383666a1e36b3386db21ceca3385c319 130 PANTHER PTHR10584:SF191 5 66 3.2E-18 T 23-04-2016 NIAKO_RS22285 383666a1e36b3386db21ceca3385c319 130 Pfam PF04241 Protein of unknown function (DUF423) 19 111 1.7E-28 T 23-04-2016 IPR006696 Protein of unknown function DUF423 NIAKO_RS22285 383666a1e36b3386db21ceca3385c319 130 PANTHER PTHR10584 5 66 3.2E-18 T 23-04-2016 NIAKO_RS18360 9e40fce9d51ee602401e4a2be7317b78 228 Pfam PF12875 Protein of unknown function (DUF3826) 38 220 1.7E-75 T 23-04-2016 IPR024284 Protein of unknown function DUF3826 NIAKO_RS26670 b8072360e12df7e70a34f2a904a89cbc 622 Gene3D G3DSA:3.40.1350.10 496 548 4.9E-4 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NIAKO_RS12425 5058ce9148a9b172cb9fc13d848efea1 141 SUPERFAMILY SSF48452 86 115 8.01E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12425 5058ce9148a9b172cb9fc13d848efea1 141 SUPERFAMILY SSF48452 8 44 8.01E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12425 5058ce9148a9b172cb9fc13d848efea1 141 Gene3D G3DSA:1.25.40.10 7 42 1.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS12425 5058ce9148a9b172cb9fc13d848efea1 141 Gene3D G3DSA:1.25.40.10 86 115 1.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS03265 80bf5a3968d908ada8e23ab3fb88caa7 742 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 389 473 5.8E-12 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 NIAKO_RS13865 26119569c235951a5690309c2248aeea 291 SUPERFAMILY SSF82171 47 281 3.57E-5 T 23-04-2016 NIAKO_RS30630 99c4bd88f7e51d9848d809eb655fcd29 266 Pfam PF02405 Permease MlaE 48 258 2.5E-68 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS30630 99c4bd88f7e51d9848d809eb655fcd29 266 PANTHER PTHR30188 42 265 4.1E-75 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NIAKO_RS30630 99c4bd88f7e51d9848d809eb655fcd29 266 PANTHER PTHR30188:SF6 42 265 4.1E-75 T 23-04-2016 NIAKO_RS00915 dbad29174e7cdcbd6712ce739eac7eb2 229 Gene3D G3DSA:1.10.10.10 17 51 8.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS06650 d7acb3acf0727c00516e522d1896c226 334 Pfam PF16328 Domain of unknown function (DUF4961) 23 318 7.8E-159 T 23-04-2016 IPR032522 Protein of unknown function DUF4961 NIAKO_RS22075 d604685c71e1414f50cf4d18976da849 312 SUPERFAMILY SSF47090 240 303 1.43E-7 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS22075 d604685c71e1414f50cf4d18976da849 312 Gene3D G3DSA:1.10.101.10 233 303 6.4E-5 T 23-04-2016 IPR002477 Peptidoglycan binding-like NIAKO_RS16175 5de46bb15c9a51fb80ae71f727667822 140 Pfam PF12869 tRNA_anti-like 7 136 1.7E-15 T 23-04-2016 IPR024422 Protein of unknown function, OB-fold-containing NIAKO_RS17655 edda26553746bf6a2d0c29b5f0f316f5 219 Pfam PF01177 Asp/Glu/Hydantoin racemase 55 214 5.1E-8 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS17655 edda26553746bf6a2d0c29b5f0f316f5 219 Gene3D G3DSA:3.40.50.1860 23 147 1.6E-7 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NIAKO_RS10095 bc75a53e1d383f7b62be0689733c5841 218 Pfam PF14224 Domain of unknown function (DUF4331) 26 97 3.5E-12 T 23-04-2016 IPR025566 Protein of unknown function DUF4331 NIAKO_RS10095 bc75a53e1d383f7b62be0689733c5841 218 Pfam PF14224 Domain of unknown function (DUF4331) 109 216 2.5E-17 T 23-04-2016 IPR025566 Protein of unknown function DUF4331 NIAKO_RS11875 2ac9e0c30b0de3932589035ac7a02faf 289 Pfam PF09357 RteC protein 64 283 2.8E-67 T 23-04-2016 IPR018534 Tetracycline regulation of excision, RteC NIAKO_RS29460 27e26403a82805ed0f938b3b897a81ec 423 Pfam PF13568 Outer membrane protein beta-barrel domain 223 373 3.0E-6 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS13705 ba764b74b0f1b1dd8aa8765da8288440 335 Pfam PF11751 Protein of unknown function (DUF3308) 24 316 2.6E-50 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS13705 ba764b74b0f1b1dd8aa8765da8288440 335 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 9 316 1.0E-56 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS36610 2da5a8babaee6fd5450aabd50c15e497 389 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 328 349 3.5E-7 T 23-04-2016 IPR019626 Stress-induced protein, KGG, repeat NIAKO_RS01040 5b321dc9a91ebcb1d9ffdd1f02f19cf1 225 Pfam PF12099 Protein of unknown function (DUF3575) 14 179 7.5E-6 T 23-04-2016 IPR021958 Protein of unknown function DUF3575 NIAKO_RS37405 c22fb0a3e82842d12d30d93754fd7418 192 Pfam PF13568 Outer membrane protein beta-barrel domain 20 167 6.5E-22 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS27110 47676e4bbdae8d962f89aa3a2cf3f716 191 Gene3D G3DSA:2.40.160.60 47 83 2.9E-4 T 23-04-2016 NIAKO_RS30455 65819f760e600997680442528db416e3 322 Pfam PF12081 GldM N-terminal domain 28 217 1.3E-7 T 23-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal NIAKO_RS04600 a0d578d1616a1378bfcdc6a83b82a4d5 171 Pfam PF03692 Putative zinc- or iron-chelating domain 58 143 7.5E-14 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein NIAKO_RS09720 894df6c5f73bf7131eff71f80e3f8b0a 236 PANTHER PTHR13353 6 232 1.5E-41 T 23-04-2016 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 NIAKO_RS09720 894df6c5f73bf7131eff71f80e3f8b0a 236 Pfam PF01940 Integral membrane protein DUF92 12 226 9.7E-47 T 23-04-2016 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 NIAKO_RS23295 433e40fafa77f880161aa38b68ea1854 449 Pfam PF14092 Domain of unknown function (DUF4270) 33 409 1.3E-28 T 23-04-2016 IPR025366 Protein of unknown function DUF4270 NIAKO_RS05595 4323e43a6dda35d109439356ee3c25a1 210 Pfam PF08281 Sigma-70, region 4 149 191 2.1E-6 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS05595 4323e43a6dda35d109439356ee3c25a1 210 SUPERFAMILY SSF88659 142 191 9.16E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NIAKO_RS05595 4323e43a6dda35d109439356ee3c25a1 210 Gene3D G3DSA:1.10.10.10 146 191 2.8E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NIAKO_RS18275 fa6b5a4bd0923ff9ab5042735a202f1f 112 Pfam PF11009 Protein of unknown function (DUF2847) 6 104 5.5E-33 T 23-04-2016 IPR022551 Protein of unknown function DUF2847 NIAKO_RS18275 fa6b5a4bd0923ff9ab5042735a202f1f 112 SUPERFAMILY SSF52833 7 98 5.18E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold NIAKO_RS18275 fa6b5a4bd0923ff9ab5042735a202f1f 112 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 107 2.2E-33 T 23-04-2016 IPR022551 Protein of unknown function DUF2847 NIAKO_RS04655 ec1c305d403fffc5704192f116c22c5a 170 Pfam PF11138 Protein of unknown function (DUF2911) 29 169 3.1E-50 T 23-04-2016 IPR021314 Protein of unknown function DUF2911 NIAKO_RS01980 ddc270bb57cd528d1742de67d2437e72 1541 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1045 1510 3.0E-36 T 23-04-2016 IPR007452 Translocation and assembly module TamB NIAKO_RS09635 1c801c1ba6b3a5275b4451af69c437da 84 SUPERFAMILY SSF53597 3 47 6.28E-5 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain NIAKO_RS04595 6b77f136ba29ec4dfa3fcc44d1130632 304 PANTHER PTHR21624 14 279 4.5E-57 T 23-04-2016 NIAKO_RS04595 6b77f136ba29ec4dfa3fcc44d1130632 304 Pfam PF04116 Fatty acid hydroxylase superfamily 84 217 1.3E-26 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS19565 d0053d5f081a79c0eeb769d1c94f00c5 75 Pfam PF13817 IS66 C-terminal element 26 64 4.7E-12 T 23-04-2016 NIAKO_RS05290 c885dc7532c4f3012d279425cccb1f4e 81 Gene3D G3DSA:1.20.5.170 7 30 6.3E-4 T 23-04-2016 NIAKO_RS05550 9dc979d20de44178bdbedc2505354828 409 Pfam PF01435 Peptidase family M48 55 235 1.6E-8 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NIAKO_RS05550 9dc979d20de44178bdbedc2505354828 409 Gene3D G3DSA:3.30.2010.10 47 128 6.1E-11 T 23-04-2016 NIAKO_RS02415 6a67c56d0ad73b8b7b01c056f67d0080 95 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 25 95 5.5E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS15880 171e071089e7dd3335a93eb50a1f7c1f 647 SUPERFAMILY SSF117892 328 447 7.59E-5 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS15880 171e071089e7dd3335a93eb50a1f7c1f 647 Pfam PF01145 SPFH domain / Band 7 family 244 457 1.3E-23 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS04235 52b3e5a04eef99dc24a514a2c42c04dd 274 Pfam PF12833 Helix-turn-helix domain 180 263 1.1E-8 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NIAKO_RS00580 117b6a8076f5d79acb0ac98e68d6a800 215 Pfam PF13568 Outer membrane protein beta-barrel domain 21 189 5.0E-18 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS00580 117b6a8076f5d79acb0ac98e68d6a800 215 SUPERFAMILY SSF56925 24 214 5.69E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS11625 ff18bfc750b6704e56ed39e75e8cda06 623 SUPERFAMILY SSF56935 22 612 1.05E-15 T 23-04-2016 NIAKO_RS19705 bc280cd2eec43124f1f47a087557d68b 210 Pfam PF03703 Bacterial PH domain 93 153 3.6E-11 T 23-04-2016 IPR005182 Domain of unknown function DUF304 NIAKO_RS18315 f0040b65738d0d83c1b7b9e58d2724aa 243 Pfam PF13568 Outer membrane protein beta-barrel domain 23 207 2.8E-18 T 23-04-2016 IPR025665 Outer membrane protein beta-barrel domain NIAKO_RS03060 8e6511ffa78541bb4de6a397a331c52c 168 Pfam PF08241 Methyltransferase domain 25 109 1.8E-5 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NIAKO_RS03060 8e6511ffa78541bb4de6a397a331c52c 168 SUPERFAMILY SSF53335 17 149 6.54E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS03060 8e6511ffa78541bb4de6a397a331c52c 168 Gene3D G3DSA:3.40.50.150 24 148 6.2E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS00800 dba35c823f38071a3d2a2264ac029ddb 240 Pfam PF09992 Phosphodiester glycosidase 70 218 1.0E-25 T 23-04-2016 IPR018711 Phosphodiester glycosidase NIAKO_RS19830 0e22f8c00061aae4a8b39382434d8f5c 411 Pfam PF02687 FtsX-like permease family 287 401 3.4E-22 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NIAKO_RS19830 0e22f8c00061aae4a8b39382434d8f5c 411 Pfam PF12704 MacB-like periplasmic core domain 20 236 2.2E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain NIAKO_RS19830 0e22f8c00061aae4a8b39382434d8f5c 411 PANTHER PTHR30572 1 410 1.3E-45 T 23-04-2016 NIAKO_RS17775 990b00763039fb80d3f47c3ee1d070bb 223 Pfam PF12875 Protein of unknown function (DUF3826) 31 215 4.2E-75 T 23-04-2016 IPR024284 Protein of unknown function DUF3826 NIAKO_RS11465 dfd6f467a18657300c60dd915c266a94 211 Pfam PF14063 Protein of unknown function (DUF4254) 46 189 3.5E-58 T 23-04-2016 IPR025350 Protein of unknown function DUF4254 NIAKO_RS23550 7726482379fa366c5ac068d6c08e3f67 373 Pfam PF14020 Protein of unknown function (DUF4236) 3 52 2.0E-19 T 23-04-2016 IPR025330 Domain of unknown function DUF4236 NIAKO_RS09910 58c28d1f5c081961737d36b591e494b5 676 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 97 256 1.8E-21 T 23-04-2016 IPR024618 Domain of unknown function DUF3857 NIAKO_RS09865 2f27fc74f950d2d06c4231fcbb44b402 322 Pfam PF01944 Stage II sporulation protein M 99 277 3.9E-32 T 23-04-2016 IPR002798 Stage II sporulation protein M-like NIAKO_RS09865 2f27fc74f950d2d06c4231fcbb44b402 322 PANTHER PTHR35337 14 313 6.5E-38 T 23-04-2016 NIAKO_RS21810 c1522891ba2eb2fc63e917f329469ce9 189 Pfam PF13795 HupE / UreJ protein 7 161 2.2E-47 T 23-04-2016 IPR032809 Putative HupE/UreJ protein NIAKO_RS03190 2b913aebeefdff75c0d7dfb4f146ef31 121 Pfam PF05656 Protein of unknown function (DUF805) 11 104 2.0E-28 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 NIAKO_RS03190 2b913aebeefdff75c0d7dfb4f146ef31 121 PANTHER PTHR34980:SF2 1 120 4.8E-21 T 23-04-2016 NIAKO_RS03190 2b913aebeefdff75c0d7dfb4f146ef31 121 PANTHER PTHR34980 1 120 4.8E-21 T 23-04-2016 NIAKO_RS18710 7bdf24592cebca694f7e467b8e9f9b25 463 Gene3D G3DSA:1.25.40.10 249 409 3.8E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NIAKO_RS18710 7bdf24592cebca694f7e467b8e9f9b25 463 Pfam PF13281 Domain of unknown function (DUF4071) 88 441 1.6E-43 T 23-04-2016 IPR025136 Domain of unknown function DUF4071 NIAKO_RS07925 c8290128468b495e2d00869f347db440 310 Pfam PF13369 Transglutaminase-like superfamily 102 261 1.7E-24 T 23-04-2016 IPR032698 Protein SirB1, N-terminal NIAKO_RS06320 fc93c75fa51c55ea8b14236b9a8edec2 182 Pfam PF16117 Domain of unknown function (DUF4833) 35 171 1.0E-48 T 23-04-2016 IPR032269 Domain of unknown function DUF4833 NIAKO_RS02670 de99391102c05a14e439f87c3e3efa72 237 SUPERFAMILY SSF56091 9 228 1.87E-33 T 23-04-2016 NIAKO_RS02670 de99391102c05a14e439f87c3e3efa72 237 Pfam PF09414 RNA ligase 37 204 1.0E-26 T 23-04-2016 IPR021122 RNA ligase domain, REL/Rln2 NIAKO_RS36295 adafadea4ddab71dc0dbf09beabe9c1e 680 Pfam PF05569 BlaR1 peptidase M56 7 253 1.8E-13 T 23-04-2016 IPR008756 Peptidase M56 NIAKO_RS07955 e4866f2669dffbef785816612007405a 382 PANTHER PTHR11706:SF2 1 199 6.5E-81 T 23-04-2016 NIAKO_RS07955 e4866f2669dffbef785816612007405a 382 PANTHER PTHR11706 1 199 6.5E-81 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NIAKO_RS27410 39be375736c603eb10edc6a3ffd854d4 428 Pfam PF04932 O-Antigen ligase 198 365 4.1E-20 T 23-04-2016 IPR007016 O-antigen ligase-related NIAKO_RS18430 8225798b9cc1e3ac452a5957bf2d4668 341 Pfam PF04338 Protein of unknown function, DUF481 146 341 9.1E-7 T 23-04-2016 IPR007433 Protein of unknown function DUF481 NIAKO_RS22650 04229d415308e89d5cabe0b03d806a92 279 Gene3D G3DSA:3.30.1380.10 101 278 1.9E-9 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NIAKO_RS20750 a1161d8fda200fc913fc45840ca40af9 261 Pfam PF14054 Domain of unknown function (DUF4249) 7 255 9.0E-28 T 23-04-2016 IPR025345 Protein of unknown function DUF4249 NIAKO_RS09640 38d5692f948ccfd224c639e5d1909507 193 Gene3D G3DSA:1.20.910.10 31 175 1.5E-25 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS09640 38d5692f948ccfd224c639e5d1909507 193 SUPERFAMILY SSF48613 8 176 3.5E-23 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 NIAKO_RS21960 3faf6bc22827fb05f0f422b3457c22ef 342 Pfam PF11751 Protein of unknown function (DUF3308) 22 323 2.7E-32 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS21960 3faf6bc22827fb05f0f422b3457c22ef 342 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 7 323 7.5E-40 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS29190 4b54d58cdeec31a271b6984b74d9e99c 771 Gene3D G3DSA:2.40.160.50 460 755 1.6E-10 T 23-04-2016 NIAKO_RS03325 5cc90c43221ad7cf007b79ac9255f2d4 310 SUPERFAMILY SSF52266 187 299 3.05E-8 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03325 5cc90c43221ad7cf007b79ac9255f2d4 310 Gene3D G3DSA:3.40.50.1110 197 296 1.2E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS03325 5cc90c43221ad7cf007b79ac9255f2d4 310 Gene3D G3DSA:3.40.50.1110 17 107 1.2E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain NIAKO_RS23380 b9530d16367369282da5c4f5fe0ee900 376 Pfam PF09603 Fibrobacter succinogenes major domain (Fib_succ_major) 186 375 7.2E-12 T 23-04-2016 IPR011871 Fibrobacter succinogenes major paralogous domain NIAKO_RS23690 16a824aed4bb1e99fd3c85bc5771dcf2 312 Pfam PF05107 CRISPR-associated protein Cas7 7 256 1.9E-46 T 23-04-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C NIAKO_RS34580 121212da56042c8512eadf86b557bb3d 240 Gene3D G3DSA:2.50.20.10 125 235 5.4E-5 T 23-04-2016 NIAKO_RS02565 11c363baadbfeef3dba522e1365eca20 345 SUPERFAMILY SSF158682 108 181 7.06E-7 T 23-04-2016 IPR029024 TerB-like NIAKO_RS26150 d2e10ec59a066365f156ffd482495920 508 Pfam PF13372 Alginate export 19 164 1.5E-9 T 23-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 NIAKO_RS37075 bd55dec96baa70a37d644beeaaba0764 150 Pfam PF13488 Glycine zipper 99 144 2.3E-6 T 23-04-2016 NIAKO_RS09950 f9b5020c602e45b0f2c120fea93110f8 377 Pfam PF07681 DoxX 6 91 1.3E-7 T 23-04-2016 IPR032808 DoxX family NIAKO_RS30265 8b41c1f3e27068dc5610ba0fcf949687 581 SUPERFAMILY SSF53335 62 250 2.29E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS30265 8b41c1f3e27068dc5610ba0fcf949687 581 Gene3D G3DSA:3.40.50.150 96 304 5.7E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIAKO_RS04520 82d0d7621c88f7585aade404cfd9e88a 125 Gene3D G3DSA:1.10.760.10 57 119 5.4E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS04520 82d0d7621c88f7585aade404cfd9e88a 125 SUPERFAMILY SSF46626 11 120 2.16E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NIAKO_RS04280 85e76eda163cef0b02a86aeaf2c0b2a3 126 Pfam PF13781 DoxX-like family 12 112 4.8E-18 T 23-04-2016 IPR025695 DoxX-like family NIAKO_RS12180 4f9ca73c32d2cd0c9acf1ac7c19a7251 204 Pfam PF14014 Protein of unknown function (DUF4230) 41 186 2.6E-15 T 23-04-2016 IPR025324 Protein of unknown function DUF4230 NIAKO_RS06170 2d0747e03283ac59d15184250fcd3862 174 SUPERFAMILY SSF55961 25 169 7.48E-23 T 23-04-2016 NIAKO_RS10140 7ef3c64f38b6e15e117646156ecb5d44 102 Gene3D G3DSA:2.60.40.1120 27 100 1.1E-4 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain NIAKO_RS37090 83de58a2f9e856358adeaa0e84d6d812 491 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 418 485 1.9E-9 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS34385 70800b90f84b00be703cd3566b84aa61 200 Gene3D G3DSA:2.60.40.10 148 196 7.3E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold NIAKO_RS31345 cd0a61e7259439bd84d565f11a6a1f69 266 Pfam PF04170 NlpE N-terminal domain 58 137 1.1E-12 T 23-04-2016 IPR007298 Copper resistance lipoprotein NlpE NIAKO_RS08000 0cfb69110181bcf0688313f05ede3174 314 Pfam PF01040 UbiA prenyltransferase family 41 275 1.5E-28 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NIAKO_RS08000 0cfb69110181bcf0688313f05ede3174 314 PANTHER PTHR11048:SF27 1 310 4.6E-20 T 23-04-2016 NIAKO_RS08000 0cfb69110181bcf0688313f05ede3174 314 PANTHER PTHR11048 1 310 4.6E-20 T 23-04-2016 NIAKO_RS31225 11284554b8dae64c2d7305400d380783 168 Pfam PF10652 Protein of unknown function (DUF2480) 3 167 7.5E-73 T 23-04-2016 IPR018914 Protein of unknown function DUF2480 NIAKO_RS02050 2ba001cf7734d1e0660096e0be5675c0 160 Pfam PF03692 Putative zinc- or iron-chelating domain 48 133 4.3E-15 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein NIAKO_RS10920 925c80647ad6dc13cc0b10843af5d3ca 127 Pfam PF11236 Protein of unknown function (DUF3037) 9 126 1.7E-44 T 23-04-2016 IPR021398 Protein of unknown function DUF3037 NIAKO_RS24110 775d4113818808d74f11340e4838527e 65 Pfam PF13619 KTSC domain 3 59 3.8E-20 T 23-04-2016 IPR025309 KTSC domain NIAKO_RS11425 8510b1a33186220f7f428e30588bb4a3 394 SUPERFAMILY SSF53756 26 292 1.0E-8 T 23-04-2016 NIAKO_RS21370 d48a8d5f79430a71424273e429f12f33 243 Pfam PF13852 Protein of unknown function (DUF4197) 43 242 5.7E-75 T 23-04-2016 IPR025245 Protein of unknown function DUF4197 NIAKO_RS18450 6866de468c5bb459907a8bff561fd943 335 Gene3D G3DSA:2.10.230.10 13 58 3.7E-5 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NIAKO_RS36845 998e7b5af75c8e3b652cdcbb72156a26 159 SUPERFAMILY SSF160631 68 108 5.36E-5 T 23-04-2016 NIAKO_RS27045 c31d6f2cdcc9327cbc16c95e3b3ed043 111 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 36 101 1.0E-10 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS24580 68d4300ecbaf8074ca39b5063badf58a 521 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 446 518 5.0E-7 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS17410 501157e5a2c9e0aa4193a93c85961f3b 376 PANTHER PTHR31061 354 376 2.2E-57 T 23-04-2016 NIAKO_RS17410 501157e5a2c9e0aa4193a93c85961f3b 376 PANTHER PTHR31061 2 337 2.2E-57 T 23-04-2016 NIAKO_RS11915 f38163215007f136972cbaa4d36b6234 192 Gene3D G3DSA:2.60.120.260 21 171 2.8E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS11915 f38163215007f136972cbaa4d36b6234 192 SUPERFAMILY SSF49785 21 172 1.42E-8 T 23-04-2016 IPR008979 Galactose-binding domain-like NIAKO_RS09495 69836eb79796cec096f899dcfdb0ec9e 124 Pfam PF13564 DoxX-like family 10 98 9.0E-17 T 23-04-2016 IPR032808 DoxX family NIAKO_RS01675 5ad876cb474a99e6ce6baed29d025a29 466 Pfam PF14356 Domain of unknown function (DUF4403) 34 453 1.3E-87 T 23-04-2016 IPR025515 Protein of unknown function DUF4403 NIAKO_RS32740 b17026e1f74ba4505859301111dd118a 134 Pfam PF14078 Domain of unknown function (DUF4259) 2 124 6.1E-30 T 23-04-2016 IPR025355 Protein of unknown function DUF4259 NIAKO_RS21190 6e69524345709c7cecfa5487f09aad80 148 Gene3D G3DSA:2.30.110.10 40 100 1.7E-4 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NIAKO_RS06145 122e920e271cb7954fa45086267db3e4 227 Pfam PF14119 Domain of unknown function (DUF4288) 121 211 5.4E-24 T 23-04-2016 IPR025630 Protein of unknown function DUF4288 NIAKO_RS16190 a9a8a8a63648ce7d529d2784b44ee1a4 397 SUPERFAMILY SSF56935 36 369 2.38E-5 T 23-04-2016 NIAKO_RS18090 62a03a916a244d441c4bf43fc5a6394d 427 SUPERFAMILY SSF54001 128 290 9.32E-5 T 23-04-2016 NIAKO_RS10480 29e487eff857051a19f03a9eac9887aa 224 Gene3D G3DSA:2.40.160.20 55 178 4.4E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS10480 29e487eff857051a19f03a9eac9887aa 224 SUPERFAMILY SSF56925 50 177 7.32E-7 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NIAKO_RS25095 c19fd713e77a1a7ebf637da9fc0939f0 208 Pfam PF14129 Domain of unknown function (DUF4296) 26 111 6.5E-15 T 23-04-2016 IPR025381 Domain of unknown function DUF4296 NIAKO_RS05800 049db342c404951107bc9a86e9fc9823 297 PANTHER PTHR21624 3 271 1.0E-96 T 23-04-2016 NIAKO_RS05800 049db342c404951107bc9a86e9fc9823 297 Pfam PF04116 Fatty acid hydroxylase superfamily 80 215 1.8E-26 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NIAKO_RS15015 4024215856d8996e3a586e2a56357683 140 Pfam PF14220 Domain of unknown function (DUF4329) 44 135 2.1E-9 T 23-04-2016 IPR025479 Domain of unknown function DUF4329 NIAKO_RS30115 a85b01bd24751da26c30b317e3d3659c 347 Pfam PF03432 Relaxase/Mobilisation nuclease domain 12 159 6.0E-7 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NIAKO_RS29315 20cd8b2459e4706a8e599dccc00d4b79 405 PANTHER PTHR40407 3 405 4.4E-37 T 23-04-2016 NIAKO_RS29315 20cd8b2459e4706a8e599dccc00d4b79 405 Pfam PF07786 Protein of unknown function (DUF1624) 3 215 4.4E-14 T 23-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 NIAKO_RS04335 4e872d1958bd1403655927770a118082 119 Pfam PF14079 Domain of unknown function (DUF4260) 3 114 2.0E-45 T 23-04-2016 IPR025356 Protein of unknown function DUF4260 NIAKO_RS37250 75de0c0a40f23d4aa35f0847f81b8fce 201 SUPERFAMILY SSF117892 102 171 2.88E-5 T 23-04-2016 IPR001107 Band 7 domain NIAKO_RS01735 a5a705c024c3d911505d29e91271478b 88 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 11 79 2.6E-6 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS19285 66571d4032b2db11c6b01958e06a41b8 440 Pfam PF14135 Domain of unknown function (DUF4302) 21 256 7.6E-57 T 23-04-2016 IPR025396 Protein of unknown function DUF4302 NIAKO_RS36955 5092ebd807dcaa436421bd9fe1405219 595 Pfam PF05742 Transport and Golgi organisation 2 1 149 5.7E-11 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 NIAKO_RS36955 5092ebd807dcaa436421bd9fe1405219 595 SUPERFAMILY SSF56059 295 420 6.6E-8 T 23-04-2016 NIAKO_RS36955 5092ebd807dcaa436421bd9fe1405219 595 SUPERFAMILY SSF56059 472 528 6.6E-8 T 23-04-2016 NIAKO_RS27195 23fff9903b3660025f12fd6fc65337dc 317 Pfam PF01040 UbiA prenyltransferase family 49 276 3.6E-15 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NIAKO_RS28785 3b48ac81bde2d64969d7af26c68baa58 156 Pfam PF04120 Low affinity iron permease 14 139 5.9E-55 T 23-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 NIAKO_RS29205 381b8e16420a1975d592dcf8cc92b41a 346 PANTHER PTHR34580:SF3 1 341 3.6E-56 T 23-04-2016 NIAKO_RS29205 381b8e16420a1975d592dcf8cc92b41a 346 PANTHER PTHR34580 1 341 3.6E-56 T 23-04-2016 NIAKO_RS29205 381b8e16420a1975d592dcf8cc92b41a 346 Pfam PF13280 WYL domain 154 329 6.9E-23 T 23-04-2016 IPR026881 WYL domain NIAKO_RS22705 39c2816998de72d87f1d6c47475a942e 323 Pfam PF09925 Predicted membrane protein (DUF2157) 8 154 6.8E-13 T 23-04-2016 IPR018677 Domain of unknown function DUF2157 NIAKO_RS04805 91dd9357bb5451d8af6bfb8476e263cb 143 Pfam PF07681 DoxX 19 99 4.3E-10 T 23-04-2016 IPR032808 DoxX family NIAKO_RS25100 ca7906419fbb973964c09fc1ce41470b 307 Pfam PF16119 Domain of unknown function (DUF4835) 22 304 1.2E-102 T 23-04-2016 IPR032274 Protein of unknown function DUF4835 NIAKO_RS00760 5b49a0d99fd97b77196349a029284685 141 SUPERFAMILY SSF110997 57 126 1.28E-5 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 NIAKO_RS23635 7f7d2989b89fbe489fdd24545e568283 415 Pfam PF00882 Zinc dependent phospholipase C 49 206 1.2E-16 T 23-04-2016 IPR029002 Phospholipase C/D NIAKO_RS29805 342725ec81a6043c220689dc140341ee 348 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 332 7.0E-37 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 NIAKO_RS33930 7ad4c47477ad5b56971e5f3537f3022e 469 PANTHER PTHR41339 21 451 8.5E-36 T 23-04-2016 NIAKO_RS09280 2b9673e1452d0c7693dc685bc7f3443e 432 SUPERFAMILY SSF56935 70 211 3.85E-5 T 23-04-2016 NIAKO_RS09280 2b9673e1452d0c7693dc685bc7f3443e 432 SUPERFAMILY SSF56935 259 406 3.85E-5 T 23-04-2016 NIAKO_RS23280 593fc2485855030454760039f4bed7d7 120 Pfam PF16250 Domain of unknown function (DUF4907) 46 103 3.3E-12 T 23-04-2016 IPR032593 Protein of unknown function DUF4907 NIAKO_RS21945 d3ccd2e3bb9147aedbca46bf69ca53b7 161 Gene3D G3DSA:3.30.530.20 11 156 2.2E-23 T 23-04-2016 IPR023393 START-like domain NIAKO_RS21945 d3ccd2e3bb9147aedbca46bf69ca53b7 161 SUPERFAMILY SSF55961 11 156 7.97E-23 T 23-04-2016 NIAKO_RS21945 d3ccd2e3bb9147aedbca46bf69ca53b7 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 29 154 2.0E-17 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NIAKO_RS12450 cabc6abccf716deeac5140008de5a889 342 Pfam PF11751 Protein of unknown function (DUF3308) 13 319 3.0E-32 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS12450 cabc6abccf716deeac5140008de5a889 342 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 5 320 4.8E-39 T 23-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family NIAKO_RS11860 c7bc8263847725e341081af8b0ffc72e 193 Pfam PF11860 Protein of unknown function (DUF3380) 23 184 6.6E-45 T 23-04-2016 IPR024408 Domain of unknown function DUF3380 NIAKO_RS15990 d3f8c485477dc72a3fc5cefc3e5aead0 107 Pfam PF16250 Domain of unknown function (DUF4907) 38 101 1.2E-23 T 23-04-2016 IPR032593 Protein of unknown function DUF4907 NIAKO_RS04670 3edf398a4bf24a1114d0bbc5f2921310 89 Pfam PF04193 PQ loop repeat 3 56 5.5E-12 T 23-04-2016 IPR006603 PQ-loop repeat NIAKO_RS15570 6ceef88d97ff40d75b707c5f931fbd21 458 Pfam PF13372 Alginate export 61 442 1.0E-71 T 23-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 NIAKO_RS32425 51222d4f52829385eb56de3076b7d93f 481 Pfam PF07244 Surface antigen variable number repeat 51 126 8.0E-6 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 NIAKO_RS33760 cd10df328ec01454c09b3509935758ba 344 TIGRFAM TIGR03523 GldN: gliding motility associated protein GldN 87 344 2.2E-51 T 23-04-2016 IPR019847 Gliding motility associated protein GldN NIAKO_RS35255 f1a61d7a13bd7bc60ad3836af5f7322d 97 Pfam PF05488 PAAR motif 24 89 1.5E-20 T 23-04-2016 IPR008727 PAAR motif NIAKO_RS34130 f90919d8ae7eaead8d1ee3140cd5f098 300 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 286 2.2E-14 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NIAKO_RS36735 0a381ab23a16b46b35ded01fb45a14d3 149 Pfam PF14076 Domain of unknown function (DUF4258) 67 138 4.9E-18 T 23-04-2016 IPR025354 Protein of unknown function DUF4258 NIAKO_RS02965 8b52593d8f85b2409bbf8c4fb47f4039 122 Pfam PF13602 Zinc-binding dehydrogenase 8 116 4.7E-10 T 23-04-2016 NIAKO_RS28300 dc879e93aeab3a548ba46144e0d27a10 277 Pfam PF10099 Anti-sigma-K factor rskA 61 274 1.1E-31 T 23-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 NIAKO_RS05520 0b5c93bc41d4488b1d39cbf08260a0a8 193 Pfam PF10067 Predicted membrane protein (DUF2306) 34 181 1.2E-33 T 23-04-2016 IPR018750 Protein of unknown function DUF2306, membrane NIAKO_RS31385 b3c1b518336904a2e0155c9d96960603 123 Pfam PF11325 Domain of unknown function (DUF3127) 3 84 6.0E-32 T 23-04-2016 IPR021474 Protein of unknown function DUF3127 NIAKO_RS20130 9622fe12a0034cba3c9856c6771fdb4a 266 Pfam PF16132 Domain of unknown function (DUF4843) 26 182 1.2E-59 T 23-04-2016 IPR032299 Protein of unknown function DUF4843 NIAKO_RS18580 0fe444b887386067e4c122801e092926 904 SUPERFAMILY SSF48230 226 434 1.92E-7 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase NIAKO_RS05170 90a184bd72a43a7229be70820c59f71a 195 Pfam PF12385 Papain-like cysteine protease AvrRpt2 32 173 1.6E-12 T 23-04-2016 IPR022118 Peptidase C70, AvrRpt2 KEGG: 00900+3.4.22.- NIAKO_RS24715 5c857c55785d7bdbe2cb5c2cf8134070 216 Pfam PF03379 CcmB protein 5 207 4.3E-10 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NIAKO_RS34980 da4bb4476d4a6ebdec18536608ba1de9 533 Pfam PF01943 Polysaccharide biosynthesis protein 34 307 2.5E-8 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NIAKO_RS23200 8e7790b71fc0e965a1736871fd30bb3e 484 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 412 473 1.9E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS10445 5b60f03e114150fcc84a1b758dcf5369 217 Pfam PF13590 Domain of unknown function (DUF4136) 35 214 1.3E-18 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 NIAKO_RS03750 0c067c721942d24b553dabfbac9d3a07 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 1.4E-7 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NIAKO_RS15420 dd68590ef961bcfb1fcbd34c5b1826fb 358 Pfam PF14903 WG containing repeat 250 281 0.0019 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS15420 dd68590ef961bcfb1fcbd34c5b1826fb 358 Pfam PF14903 WG containing repeat 120 151 0.029 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS15420 dd68590ef961bcfb1fcbd34c5b1826fb 358 Pfam PF14903 WG containing repeat 302 326 9.3E-5 T 23-04-2016 IPR032774 WG containing repeat NIAKO_RS26615 3dcbc7158b8f3206b0ab61303c32f133 163 Gene3D G3DSA:3.40.50.620 14 116 7.8E-4 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIAKO_RS26470 78dde72fd572f62be832fbafdfd7be38 203 Pfam PF16702 Domain of unknown function (DUF5063) 38 198 5.6E-41 T 23-04-2016 IPR032025 Protein of unknown function DUF5063 NIAKO_RS37530 07a4716fccedf06440756d7efb58d9bf 141 Pfam PF14126 Domain of unknown function (DUF4293) 2 140 9.4E-30 T 23-04-2016 IPR025635 Protein of unknown function DUF4293 NIAKO_RS30345 81736fae94329127adab71aa687d6b47 243 Pfam PF13672 Protein phosphatase 2C 14 187 3.0E-12 T 23-04-2016 NIAKO_RS36410 5d03ced028a2c409c33aa4d8bf1f0b78 218 Pfam PF13021 Domain of unknown function (DUF3885) 175 212 2.4E-19 T 23-04-2016 IPR024976 Domain of unknown function DUF3885 NIAKO_RS18600 9139316af093afaa80d2f736b58a3997 322 Pfam PF06439 Domain of Unknown Function (DUF1080) 151 318 2.9E-38 T 23-04-2016 IPR010496 Domain of unknown function DUF1080 NIAKO_RS28295 0efad2e89e3fc75c815f70bfb5cf04bc 130 Pfam PF04892 VanZ like family 13 123 5.6E-7 T 23-04-2016 IPR006976 VanZ-like NIAKO_RS33955 d8687049731bad867cd3c56c19c7424b 403 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 326 398 1.0E-11 T 23-04-2016 IPR026444 Secretion system C-terminal sorting domain NIAKO_RS00855 35c650cae6b95125af8134c31708a6f7 136 Pfam PF08522 Domain of unknown function (DUF1735) 4 117 6.7E-19 T 23-04-2016 IPR013728 Domain of unknown function DUF1735 NIAKO_RS26620 e8295d29b9c8c4cbf81a4b1c05aa868c 189 Pfam PF14235 Domain of unknown function (DUF4337) 21 174 3.8E-48 T 23-04-2016 IPR025570 Protein of unknown function DUF4337 NIAKO_RS06370 9fc0f2595bfbfd31ce33107fef37562c 121 Pfam PF13564 DoxX-like family 7 107 2.2E-13 T 23-04-2016 IPR032808 DoxX family NIAKO_RS27025 966e6269e38d09033132703b5740a430 110 Gene3D G3DSA:3.20.20.70 80 108 9.6E-7 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NIAKO_RS19580 cbed15dc6ee582e125951fb3f3228314 204 Pfam PF12635 Protein of unknown function (DUF3780) 6 191 3.4E-53 T 23-04-2016 IPR024220 Protein of unknown function DUF3780 NIAKO_RS32545 e57f1ac7ca9cc26b38e8540d632b0c4b 142 Pfam PF09685 Domain of unknown function (DUF4870) 9 141 1.2E-32 T 23-04-2016 IPR019109 Protein of unknown function DUF4870 NIAKO_RS31600 c933eecb8867c1060f79a41d541d65cc 195 Pfam PF13036 Peptidoglycan-synthase activator LpoB 11 189 2.7E-48 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB NIAKO_RS06900 0af677bd123d77d1be40e1930742ccee 458 Pfam PF12770 CHAT domain 111 373 3.7E-10 T 23-04-2016 IPR024983 CHAT domain