locus-tag	class	description
FQ775_RS00010	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ775_RS00015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS00020	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FQ775_RS00030	COG0019	diaminopimelate decarboxylase activity
FQ775_RS00060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ775_RS00070	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FQ775_RS00080	COG0477	Major facilitator Superfamily
FQ775_RS00155	COG1846	Transcriptional regulator
FQ775_RS00175	COG1793	dna ligase
FQ775_RS00190	COG1201	RNA secondary structure unwinding
FQ775_RS00210	COG0730	response to heat
FQ775_RS00225	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS00230	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS00240	COG0625	glutathione transferase activity
FQ775_RS00245	COG0183	Belongs to the thiolase family
FQ775_RS00250	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ775_RS00250	COG1024	Enoyl-CoA hydratase
FQ775_RS00275	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FQ775_RS00285	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
FQ775_RS00300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS00305	COG2197	response regulator
FQ775_RS00315	COG1024	Enoyl-CoA hydratase
FQ775_RS00325	COG2326	polyphosphate kinase activity
FQ775_RS00330	COG5002	protein histidine kinase activity
FQ775_RS00335	COG0704	Plays a role in the regulation of phosphate uptake
FQ775_RS00345	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FQ775_RS00350	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FQ775_RS00360	COG2967	ApaG domain
FQ775_RS00365	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FQ775_RS00375	COG0717	Belongs to the dCTP deaminase family
FQ775_RS00405	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS00420	COG0604	alcohol dehydrogenase
FQ775_RS00430	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS00435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS00455	COG1414	Transcriptional regulator
FQ775_RS00495	COG3246	L-lysine catabolic process to acetate
FQ775_RS00500	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FQ775_RS00525	COG2358	TRAP transporter, solute receptor (TAXI family
FQ775_RS00540	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ775_RS00550	COG3246	L-lysine catabolic process to acetate
FQ775_RS00560	COG0747	negative chemotaxis
FQ775_RS00570	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS00575	COG4608	Belongs to the ABC transporter superfamily
FQ775_RS00650	COG0006	proline dipeptidase activity
FQ775_RS00665	COG0747	negative chemotaxis
FQ775_RS00670	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FQ775_RS00690	COG4269	membrane
FQ775_RS00700	COG0477	Major facilitator Superfamily
FQ775_RS00705	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FQ775_RS00710	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FQ775_RS00710	COG0248	Ppx GppA phosphatase
FQ775_RS00720	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS00725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FQ775_RS00730	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FQ775_RS00740	COG3386	PFAM SMP-30 Gluconolaconase
FQ775_RS00750	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS00780	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS00785	COG1024	Enoyl-CoA hydratase
FQ775_RS00800	COG1902	pentaerythritol trinitrate reductase activity
FQ775_RS00805	COG2072	flavoprotein involved in K transport
FQ775_RS00820	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FQ775_RS00825	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FQ775_RS00825	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FQ775_RS00835	COG0519	Catalyzes the synthesis of GMP from XMP
FQ775_RS00835	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FQ775_RS00840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS00845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FQ775_RS00855	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS00860	COG3842	ATPase activity
FQ775_RS00880	COG0436	Aminotransferase
FQ775_RS00890	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS00915	COG5441	Belongs to the UPF0261 family
FQ775_RS00930	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS00935	COG1129	ABC transporter
FQ775_RS00940	COG1879	ABC-type sugar transport system periplasmic component
FQ775_RS00965	COG1609	Transcriptional regulator
FQ775_RS00970	COG3971	2-oxopent-4-enoate hydratase activity
FQ775_RS00975	COG0179	Fumarylacetoacetate (FAA) hydrolase
FQ775_RS01000	COG0745	RESPONSE REGULATOR receiver
FQ775_RS01010	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS01025	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FQ775_RS01035	COG4143	(ABC) transporter
FQ775_RS01060	COG0129	dihydroxy-acid dehydratase activity
FQ775_RS01070	COG4214	carbohydrate transport
FQ775_RS01090	COG3734	2-keto-3-deoxy-galactonokinase
FQ775_RS01095	COG0800	Aldolase
FQ775_RS01100	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FQ775_RS01105	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
FQ775_RS01110	COG1129	ABC transporter
FQ775_RS01130	COG1393	Belongs to the ArsC family
FQ775_RS01135	COG0583	DNA-binding transcription factor activity
FQ775_RS01155	COG0640	Transcriptional regulator
FQ775_RS01160	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ775_RS01165	COG0477	Major facilitator Superfamily
FQ775_RS01170	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FQ775_RS01205	COG0356	it plays a direct role in the translocation of protons across the membrane
FQ775_RS01210	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FQ775_RS01215	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FQ775_RS01220	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FQ775_RS01225	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FQ775_RS01240	COG0521	Mo-molybdopterin cofactor biosynthetic process
FQ775_RS01245	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FQ775_RS01270	COG0142	geranyltranstransferase activity
FQ775_RS01290	COG0752	glycyl-tRNA synthetase alpha subunit
FQ775_RS01305	COG0751	glycine-tRNA ligase activity
FQ775_RS01315	COG0009	L-threonylcarbamoyladenylate synthase
FQ775_RS01320	COG0277	FAD linked oxidase domain protein
FQ775_RS01345	COG0151	Belongs to the GarS family
FQ775_RS01355	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS01370	COG0259	pyridoxamine-phosphate oxidase activity
FQ775_RS01380	COG0484	heat shock protein binding
FQ775_RS01385	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FQ775_RS01390	COG0406	alpha-ribazole phosphatase activity
FQ775_RS01400	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FQ775_RS01405	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FQ775_RS01405	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FQ775_RS01425	COG0123	including yeast histone deacetylase and acetoin utilization protein
FQ775_RS01430	COG1722	exodeoxyribonuclease VII activity
FQ775_RS01440	COG1741	Belongs to the pirin family
FQ775_RS01445	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FQ775_RS01455	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FQ775_RS01460	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FQ775_RS01465	COG1309	transcriptional regulator
FQ775_RS01480	COG0312	modulator of DNA gyrase
FQ775_RS01495	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FQ775_RS01495	COG1565	acr, cog1565
FQ775_RS01500	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FQ775_RS01505	COG0109	protoheme IX farnesyltransferase activity
FQ775_RS01515	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FQ775_RS01535	COG3346	SURF1 family
FQ775_RS01540	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FQ775_RS01545	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FQ775_RS01550	COG0328	RNA-DNA hybrid ribonuclease activity
FQ775_RS01555	COG0678	peroxiredoxin activity
FQ775_RS01565	COG1678	Uncharacterized ACR, COG1678
FQ775_RS01570	COG3300	MHYT domain
FQ775_RS01570	COG5001	Diguanylate cyclase
FQ775_RS01575	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ775_RS01580	COG0612	Peptidase, M16
FQ775_RS01595	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FQ775_RS01600	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FQ775_RS01610	COG1011	Hydrolase
FQ775_RS01630	COG1196	nuclear chromosome segregation
FQ775_RS01665	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FQ775_RS01695	COG0673	inositol 2-dehydrogenase activity
FQ775_RS01715	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FQ775_RS01720	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FQ775_RS01735	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FQ775_RS01740	COG0110	maltose O-acetyltransferase activity
FQ775_RS01745	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FQ775_RS01775	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FQ775_RS01810	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FQ775_RS01810	COG0574	Belongs to the PEP-utilizing enzyme family
FQ775_RS01820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ775_RS01860	COG0789	Transcriptional regulator
FQ775_RS01900	COG0175	sulfate reduction
FQ775_RS01955	COG2124	cytochrome p450
FQ775_RS01980	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS01985	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FQ775_RS01995	COG3119	arylsulfatase activity
FQ775_RS02000	COG1309	transcriptional regulator
FQ775_RS02010	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS02020	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FQ775_RS02060	COG0433	COG0433 Predicted ATPase
FQ775_RS02065	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS02080	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FQ775_RS02085	COG3909	cytochrome
FQ775_RS02090	COG2010	Cytochrome c
FQ775_RS02110	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ775_RS02120	COG2111	Na H antiporter
FQ775_RS02125	COG1006	Multisubunit Na H antiporter MnhC subunit
FQ775_RS02135	COG1863	multisubunit Na H antiporter MnhE subunit
FQ775_RS02140	COG2212	antiporter activity
FQ775_RS02145	COG1320	monovalent cation:proton antiporter activity
FQ775_RS02150	COG4957	zinc ion binding
FQ775_RS02170	COG2166	iron-sulfur cluster assembly
FQ775_RS02180	COG2205	protein histidine kinase activity
FQ775_RS02220	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FQ775_RS02255	COG4695	Portal protein
FQ775_RS02350	COG0745	RESPONSE REGULATOR receiver
FQ775_RS02355	COG5002	protein histidine kinase activity
FQ775_RS02365	COG4235	cytochrome complex assembly
FQ775_RS02370	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FQ775_RS02375	COG1138	Cytochrome C-type biogenesis protein
FQ775_RS02380	COG3088	subunit of a heme lyase
FQ775_RS02390	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FQ775_RS02395	COG0745	RESPONSE REGULATOR receiver
FQ775_RS02400	COG2205	protein histidine kinase activity
FQ775_RS02405	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FQ775_RS02415	COG2205	protein histidine kinase activity
FQ775_RS02415	COG2202	Pas domain
FQ775_RS02420	COG0308	aminopeptidase N
FQ775_RS02510	COG0583	DNA-binding transcription factor activity
FQ775_RS02515	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FQ775_RS02525	COG0625	glutathione transferase activity
FQ775_RS02585	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FQ775_RS02610	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FQ775_RS02635	COG3591	Belongs to the peptidase S1B family
FQ775_RS02650	COG2814	Major facilitator Superfamily
FQ775_RS02675	COG3591	Belongs to the peptidase S1B family
FQ775_RS02675	COG1864	DNA RNA non-specific endonuclease
FQ775_RS02685	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS02695	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ775_RS02705	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FQ775_RS02715	COG0803	Belongs to the bacterial solute-binding protein 9 family
FQ775_RS02720	COG1121	(ABC) transporter
FQ775_RS02725	COG1321	iron dependent repressor
FQ775_RS02725	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FQ775_RS02730	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FQ775_RS02755	COG0583	DNA-binding transcription factor activity
FQ775_RS02785	COG2945	thiolester hydrolase activity
FQ775_RS02785	COG0596	Alpha beta hydrolase
FQ775_RS02790	COG0741	lytic transglycosylase activity
FQ775_RS02795	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FQ775_RS02800	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FQ775_RS02805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS02810	COG1116	anion transmembrane transporter activity
FQ775_RS02820	COG0583	DNA-binding transcription factor activity
FQ775_RS02830	COG0697	spore germination
FQ775_RS02835	COG0436	Aminotransferase
FQ775_RS02850	COG2186	Transcriptional regulator
FQ775_RS02870	COG0765	amino acid transport
FQ775_RS02895	COG1573	uracil-dna glycosylase
FQ775_RS02905	COG0840	transmembrane signaling receptor activity
FQ775_RS02910	COG1758	RNA polymerase activity
FQ775_RS02925	COG0736	holo-[acyl-carrier-protein] synthase activity
FQ775_RS02930	COG0681	Belongs to the peptidase S26 family
FQ775_RS02935	COG0571	ribonuclease III activity
FQ775_RS02940	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FQ775_RS02955	COG1381	Involved in DNA repair and RecF pathway recombination
FQ775_RS02975	COG0668	transmembrane transport
FQ775_RS03020	COG0454	-acetyltransferase
FQ775_RS03020	COG0456	acetyltransferase
FQ775_RS03040	COG1595	DNA-templated transcription, initiation
FQ775_RS03045	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FQ775_RS03050	COG0354	folic acid binding
FQ775_RS03090	COG0215	cysteine-tRNA ligase activity
FQ775_RS03095	COG2852	Protein conserved in bacteria
FQ775_RS03115	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FQ775_RS03145	COG5265	(ABC) transporter
FQ775_RS03150	COG0688	phosphatidylethanolamine metabolic process
FQ775_RS03155	COG1183	phosphatidylcholine synthase activity
FQ775_RS03160	COG0251	oxidation-reduction process
FQ775_RS03165	COG2072	flavoprotein involved in K transport
FQ775_RS03205	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS03210	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FQ775_RS03225	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FQ775_RS03235	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FQ775_RS03240	COG0359	binds to the 23S rRNA
FQ775_RS03245	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FQ775_RS03250	COG0360	Binds together with S18 to 16S ribosomal RNA
FQ775_RS03260	COG1473	amidohydrolase
FQ775_RS03265	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FQ775_RS03280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FQ775_RS03285	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FQ775_RS03290	COG1561	YicC-like family, N-terminal region
FQ775_RS03295	COG0194	GDP metabolic process
FQ775_RS03300	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FQ775_RS03305	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FQ775_RS03310	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FQ775_RS03325	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FQ775_RS03335	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ775_RS03345	COG1024	Enoyl-CoA hydratase
FQ775_RS03350	COG0488	(ABC) transporter
FQ775_RS03370	COG0105	UTP biosynthetic process
FQ775_RS03385	COG0322	excinuclease ABC activity
FQ775_RS03390	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FQ775_RS03400	COG0314	molybdopterin synthase activity
FQ775_RS03410	COG0625	glutathione transferase activity
FQ775_RS03425	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FQ775_RS03430	COG0243	molybdopterin cofactor binding
FQ775_RS03450	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FQ775_RS03455	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FQ775_RS03465	COG0628	permease
FQ775_RS03510	COG0626	cystathionine gamma-synthase activity
FQ775_RS03520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS03525	COG4597	amino acid ABC transporter
FQ775_RS03530	COG0765	amino acid transport
FQ775_RS03535	COG1126	abc transporter atp-binding protein
FQ775_RS03550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ775_RS03560	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FQ775_RS03565	COG0248	Ppx GppA phosphatase
FQ775_RS03570	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FQ775_RS03590	COG1136	(ABC) transporter
FQ775_RS03595	COG1136	(ABC) transporter
FQ775_RS03595	COG0577	efflux transmembrane transporter activity
FQ775_RS03610	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FQ775_RS03620	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FQ775_RS03645	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FQ775_RS03670	COG1309	transcriptional regulator
FQ775_RS03685	COG0019	diaminopimelate decarboxylase activity
FQ775_RS03710	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FQ775_RS03720	COG2084	Dehydrogenase
FQ775_RS03735	COG0113	porphobilinogen synthase activity
FQ775_RS03740	COG1024	Enoyl-CoA hydratase
FQ775_RS03755	COG2989	Protein conserved in bacteria
FQ775_RS03765	COG2010	Cytochrome c
FQ775_RS03765	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FQ775_RS03775	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FQ775_RS03780	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FQ775_RS03785	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FQ775_RS03785	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FQ775_RS03795	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FQ775_RS03800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FQ775_RS03805	COG2814	Major facilitator Superfamily
FQ775_RS03815	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FQ775_RS03820	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ775_RS03835	COG0416	fatty acid biosynthetic process
FQ775_RS03840	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FQ775_RS03845	COG0776	regulation of translation
FQ775_RS03870	COG5002	protein histidine kinase activity
FQ775_RS03885	COG1396	sequence-specific DNA binding
FQ775_RS03885	COG3800	Transcriptional regulator
FQ775_RS03920	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FQ775_RS03955	COG1612	heme a metabolic process
FQ775_RS03965	COG2814	Major facilitator Superfamily
FQ775_RS03970	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FQ775_RS03975	COG0010	Belongs to the arginase family
FQ775_RS03990	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FQ775_RS03995	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FQ775_RS04005	COG1024	Enoyl-CoA hydratase
FQ775_RS04010	COG1024	Enoyl-CoA hydratase
FQ775_RS04015	COG1832	CoA-binding protein
FQ775_RS04025	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FQ775_RS04040	COG2124	cytochrome p450
FQ775_RS04045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS04050	COG0740	serine-type endopeptidase activity
FQ775_RS04055	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FQ775_RS04065	COG0776	regulation of translation
FQ775_RS04070	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FQ775_RS04075	COG1473	amidohydrolase
FQ775_RS04085	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS04090	COG0402	S-adenosylhomocysteine deaminase activity
FQ775_RS04095	COG3842	ATPase activity
FQ775_RS04100	COG1177	transmembrane transport
FQ775_RS04105	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS04125	COG3025	triphosphatase activity
FQ775_RS04140	COG0683	leucine binding
FQ775_RS04180	COG1129	ABC transporter
FQ775_RS04200	COG3483	tryptophan 2,3-dioxygenase activity
FQ775_RS04210	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS04215	COG1024	Enoyl-CoA hydratase
FQ775_RS04215	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ775_RS04250	COG1024	Enoyl-CoA hydratase
FQ775_RS04255	COG1045	serine acetyltransferase
FQ775_RS04310	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FQ775_RS04340	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FQ775_RS04350	COG0511	ligase activity, forming carbon-carbon bonds
FQ775_RS04355	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FQ775_RS04370	COG0436	Aminotransferase
FQ775_RS04375	COG1530	ribonuclease E activity
FQ775_RS04385	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FQ775_RS04395	COG0739	heme binding
FQ775_RS04400	COG2833	Protein of unknown function (DUF455)
FQ775_RS04405	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FQ775_RS04415	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FQ775_RS04420	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FQ775_RS04425	COG0463	Glycosyl transferase, family 2
FQ775_RS04445	COG2945	thiolester hydrolase activity
FQ775_RS04455	COG0719	Fe-S assembly protein
FQ775_RS04460	COG0396	ATPase activity
FQ775_RS04465	COG0719	Fe-S assembly protein
FQ775_RS04470	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FQ775_RS04475	COG2151	metal-sulfur cluster biosynthetic enzyme
FQ775_RS04480	COG0316	Belongs to the HesB IscA family
FQ775_RS04495	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FQ775_RS04505	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS04515	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FQ775_RS04535	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FQ775_RS04545	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FQ775_RS04555	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FQ775_RS04560	COG0081	regulation of translation
FQ775_RS04565	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FQ775_RS04570	COG0222	ribosome binding
FQ775_RS04575	COG0085	RNA polymerase activity
FQ775_RS04580	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FQ775_RS04595	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FQ775_RS04605	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FQ775_RS04610	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FQ775_RS04615	COG0051	transcription antitermination factor activity, RNA binding
FQ775_RS04620	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FQ775_RS04625	COG0088	Forms part of the polypeptide exit tunnel
FQ775_RS04630	COG0089	rRNA binding
FQ775_RS04635	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FQ775_RS04640	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FQ775_RS04645	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FQ775_RS04650	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FQ775_RS04655	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FQ775_RS04660	COG0255	Belongs to the universal ribosomal protein uL29 family
FQ775_RS04665	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FQ775_RS04670	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FQ775_RS04675	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FQ775_RS04680	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FQ775_RS04685	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FQ775_RS04690	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FQ775_RS04700	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FQ775_RS04705	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FQ775_RS04710	COG1841	ribosomal large subunit assembly
FQ775_RS04715	COG0200	Binds to the 23S rRNA
FQ775_RS04725	COG0563	adenylate kinase activity
FQ775_RS04730	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FQ775_RS04735	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FQ775_RS04740	COG0202	RNA polymerase activity
FQ775_RS04745	COG0203	ribosomal protein L17
FQ775_RS04755	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FQ775_RS04770	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FQ775_RS04775	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FQ775_RS04800	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FQ775_RS04815	COG0174	glutamine synthetase
FQ775_RS04820	COG0347	Belongs to the P(II) protein family
FQ775_RS04825	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FQ775_RS04825	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FQ775_RS04830	COG2267	carboxylic ester hydrolase activity
FQ775_RS04850	COG0625	glutathione transferase activity
FQ775_RS04865	COG5001	Diguanylate cyclase
FQ775_RS04880	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FQ775_RS04885	COG0306	phosphate transporter
FQ775_RS04895	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FQ775_RS04905	COG0513	Belongs to the DEAD box helicase family
FQ775_RS04915	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FQ775_RS04920	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ775_RS04940	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FQ775_RS04985	COG1546	Belongs to the CinA family
FQ775_RS04985	COG1058	Belongs to the CinA family
FQ775_RS05000	COG0300	oxidoreductase activity
FQ775_RS05005	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FQ775_RS05020	COG2897	thiosulfate sulfurtransferase activity
FQ775_RS05045	COG0686	Belongs to the AlaDH PNT family
FQ775_RS05055	COG1522	sequence-specific DNA binding
FQ775_RS05060	COG1511	domain protein
FQ775_RS05060	COG3264	Mechanosensitive ion channel
FQ775_RS05065	COG5001	Diguanylate cyclase
FQ775_RS05065	COG3300	MHYT domain
FQ775_RS05070	COG0737	Belongs to the 5'-nucleotidase family
FQ775_RS05075	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FQ775_RS05075	COG1648	precorrin-2 dehydrogenase activity
FQ775_RS05080	COG0243	molybdopterin cofactor binding
FQ775_RS05095	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FQ775_RS05100	COG1116	anion transmembrane transporter activity
FQ775_RS05100	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ775_RS05105	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS05110	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ775_RS05115	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ775_RS05120	COG3707	response regulator
FQ775_RS05130	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS05135	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FQ775_RS05140	COG2186	Transcriptional regulator
FQ775_RS05155	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS05160	COG1904	glucuronate isomerase
FQ775_RS05165	COG2721	sulfolactate sulfo-lyase activity
FQ775_RS05170	COG1024	Enoyl-CoA hydratase
FQ775_RS05205	COG1137	ATPase activity
FQ775_RS05210	COG0488	(ABC) transporter
FQ775_RS05215	COG0673	inositol 2-dehydrogenase activity
FQ775_RS05220	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS05230	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS05235	COG1063	alcohol dehydrogenase
FQ775_RS05250	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS05255	COG1802	Transcriptional regulator
FQ775_RS05265	COG1129	ABC transporter
FQ775_RS05270	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS05280	COG0667	Aldo Keto reductase
FQ775_RS05285	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FQ775_RS05295	COG1070	Carbohydrate kinase
FQ775_RS05320	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS05325	COG0747	negative chemotaxis
FQ775_RS05335	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS05370	COG0724	RNA recognition motif
FQ775_RS05380	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FQ775_RS05385	COG0840	transmembrane signaling receptor activity
FQ775_RS05390	COG0730	response to heat
FQ775_RS05405	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FQ775_RS05410	COG2205	protein histidine kinase activity
FQ775_RS05410	COG2202	Pas domain
FQ775_RS05425	COG1573	uracil-dna glycosylase
FQ775_RS05430	COG1522	sequence-specific DNA binding
FQ775_RS05450	COG2084	Dehydrogenase
FQ775_RS05465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS05470	COG1763	Mo-molybdopterin cofactor biosynthetic process
FQ775_RS05475	COG0746	molybdenum cofactor guanylyltransferase activity
FQ775_RS05480	COG2814	Major facilitator Superfamily
FQ775_RS05500	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FQ775_RS05535	COG2223	nitrite transmembrane transporter activity
FQ775_RS05545	COG1846	Transcriptional regulator
FQ775_RS05565	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FQ775_RS05580	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS05585	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FQ775_RS05585	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FQ775_RS05590	COG2989	Protein conserved in bacteria
FQ775_RS05595	COG0726	polysaccharide deacetylase
FQ775_RS05610	COG3920	Histidine kinase
FQ775_RS05690	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FQ775_RS05745	COG4373	Mu-like prophage FluMu protein gp28
FQ775_RS05750	COG4383	Mu-like prophage protein gp29
FQ775_RS05775	COG4397	Mu-like prophage major head subunit gpT
FQ775_RS05780	COG3743	rRNA binding
FQ775_RS05780	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FQ775_RS05870	COG2135	peptidase activity
FQ775_RS05885	COG0546	phosphoglycolate phosphatase activity
FQ775_RS05890	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FQ775_RS05920	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FQ775_RS05925	COG3447	MASE1 domain protein
FQ775_RS05925	COG5001	Diguanylate cyclase
FQ775_RS05925	COG5002	protein histidine kinase activity
FQ775_RS05935	COG3384	dioxygenase
FQ775_RS05965	COG0740	serine-type endopeptidase activity
FQ775_RS05975	COG0640	Transcriptional regulator
FQ775_RS05990	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FQ775_RS06010	COG0281	malic enzyme
FQ775_RS06010	COG0280	phosphate acetyltransferase
FQ775_RS06030	COG2814	Major facilitator Superfamily
FQ775_RS06035	COG4948	Mandelate Racemase Muconate Lactonizing
FQ775_RS06040	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FQ775_RS06045	COG1127	ABC transporter
FQ775_RS06050	COG3218	ABC-type transport auxiliary lipoprotein component
FQ775_RS06050	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FQ775_RS06070	COG0633	Ferredoxin
FQ775_RS06075	COG0492	ferredoxin-NADP+ reductase activity
FQ775_RS06100	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FQ775_RS06105	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FQ775_RS06110	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FQ775_RS06120	COG3768	UPF0283 membrane protein
FQ775_RS06125	COG3106	COG3106 Predicted ATPase
FQ775_RS06190	COG2885	chlorophyll binding
FQ775_RS06195	COG2313	pseudouridylate synthase activity
FQ775_RS06205	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FQ775_RS06210	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FQ775_RS06215	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FQ775_RS06215	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FQ775_RS06220	COG0509	glycine decarboxylation via glycine cleavage system
FQ775_RS06225	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ775_RS06235	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FQ775_RS06240	COG1671	Belongs to the UPF0178 family
FQ775_RS06250	COG0395	ABC-type sugar transport system, permease component
FQ775_RS06255	COG1175	transmembrane transport
FQ775_RS06260	COG1653	transport
FQ775_RS06265	COG4770	biotin carboxylase activity
FQ775_RS06295	COG0596	Alpha beta hydrolase
FQ775_RS06305	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FQ775_RS06325	COG0784	Response regulator, receiver
FQ775_RS06335	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FQ775_RS06355	COG0557	exoribonuclease II activity
FQ775_RS06360	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FQ775_RS06375	COG1522	sequence-specific DNA binding
FQ775_RS06410	COG0811	peptide transport
FQ775_RS06420	COG4771	TonB-dependent receptor
FQ775_RS06430	COG3720	iron ion transport
FQ775_RS06435	COG4558	Periplasmic binding protein
FQ775_RS06440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FQ775_RS06445	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FQ775_RS06470	COG0656	L-ascorbic acid biosynthetic process
FQ775_RS06520	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FQ775_RS06530	COG0629	single-stranded DNA binding
FQ775_RS06535	COG0346	lactoylglutathione lyase activity
FQ775_RS06555	COG2095	MarC family integral membrane protein
FQ775_RS06575	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FQ775_RS06585	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FQ775_RS06605	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FQ775_RS06610	COG0343	queuine tRNA-ribosyltransferase activity
FQ775_RS06625	COG2308	Evidence 4 Homologs of previously reported genes of
FQ775_RS06670	COG3842	ATPase activity
FQ775_RS06675	COG1175	transmembrane transport
FQ775_RS06680	COG0395	ABC-type sugar transport system, permease component
FQ775_RS06695	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FQ775_RS06705	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS06720	COG0758	DNA mediated transformation
FQ775_RS06725	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FQ775_RS06730	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FQ775_RS06735	COG0540	Belongs to the ATCase OTCase family
FQ775_RS06740	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS06760	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FQ775_RS06765	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FQ775_RS06775	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FQ775_RS06780	COG0454	-acetyltransferase
FQ775_RS06785	COG0154	amidase activity
FQ775_RS06805	COG1760	l-serine dehydratase
FQ775_RS06815	COG1192	Involved in chromosome partitioning
FQ775_RS06825	COG0484	heat shock protein binding
FQ775_RS06830	COG1686	Belongs to the peptidase S11 family
FQ775_RS06840	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FQ775_RS06865	COG0537	adenosine 5'-monophosphoramidase activity
FQ775_RS06900	COG0052	Belongs to the universal ribosomal protein uS2 family
FQ775_RS06905	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FQ775_RS06910	COG0528	UMP kinase activity
FQ775_RS06915	COG0233	cytoplasmic translational termination
FQ775_RS06920	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FQ775_RS06930	COG0750	zinc metalloprotease
FQ775_RS06935	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ775_RS06940	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ775_RS06945	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FQ775_RS06950	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ775_RS06960	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ775_RS06965	COG0372	Belongs to the citrate synthase family
FQ775_RS06970	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FQ775_RS06980	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FQ775_RS06985	COG0303	'Molybdopterin
FQ775_RS06990	COG0315	cyclic pyranopterin monophosphate synthase activity
FQ775_RS06995	COG0134	indole-3-glycerol-phosphate synthase activity
FQ775_RS07000	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FQ775_RS07010	COG0149	triose-phosphate isomerase activity
FQ775_RS07025	COG0504	CTP synthase activity
FQ775_RS07035	COG1686	Belongs to the peptidase S11 family
FQ775_RS07045	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FQ775_RS07065	COG0148	phosphopyruvate hydratase activity
FQ775_RS07070	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FQ775_RS07075	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FQ775_RS07080	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ775_RS07080	COG0022	dehydrogenase e1 component
FQ775_RS07090	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ775_RS07100	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FQ775_RS07105	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FQ775_RS07110	COG2867	negative regulation of translational initiation
FQ775_RS07120	COG1546	Belongs to the CinA family
FQ775_RS07125	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FQ775_RS07125	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FQ775_RS07135	COG3852	Histidine kinase
FQ775_RS07140	COG2204	response regulator
FQ775_RS07145	COG5000	phosphorelay sensor kinase activity
FQ775_RS07150	COG2204	response regulator
FQ775_RS07155	COG0569	domain protein
FQ775_RS07160	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FQ775_RS07165	COG1923	regulation of RNA biosynthetic process
FQ775_RS07170	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FQ775_RS07175	COG3956	TIGRFAM MazG family protein
FQ775_RS07180	COG1846	Transcriptional regulator
FQ775_RS07205	COG1129	ABC transporter
FQ775_RS07215	COG1335	isochorismatase
FQ775_RS07245	COG1846	Transcriptional regulator
FQ775_RS07265	COG2755	lipolytic protein G-D-S-L family
FQ775_RS07265	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FQ775_RS07275	COG0785	Cytochrome C biogenesis protein
FQ775_RS07280	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FQ775_RS07285	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FQ775_RS07295	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FQ775_RS07305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FQ775_RS07315	COG4166	transmembrane transport
FQ775_RS07330	COG0679	Auxin Efflux Carrier
FQ775_RS07335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ775_RS07350	COG1183	phosphatidylcholine synthase activity
FQ775_RS07360	COG1129	ABC transporter
FQ775_RS07385	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FQ775_RS07430	COG2358	TRAP transporter, solute receptor (TAXI family
FQ775_RS07455	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FQ775_RS07460	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FQ775_RS07465	COG0583	DNA-binding transcription factor activity
FQ775_RS07480	COG3158	transport of potassium into the cell
FQ775_RS07495	COG3609	addiction module antidote protein, CC2985 family
FQ775_RS07535	COG2226	methyltransferase
FQ775_RS07570	COG0154	amidase activity
FQ775_RS07575	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FQ775_RS07580	COG0747	negative chemotaxis
FQ775_RS07600	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS07610	COG0601	transmembrane transport
FQ775_RS07615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS07645	COG1304	FMN binding
FQ775_RS07650	COG0251	oxidation-reduction process
FQ775_RS07660	COG3181	Tripartite tricarboxylate transporter family receptor
FQ775_RS07720	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ775_RS07745	COG1475	DNA binding
FQ775_RS07775	COG0071	Belongs to the small heat shock protein (HSP20) family
FQ775_RS07780	COG0071	Belongs to the small heat shock protein (HSP20) family
FQ775_RS07790	COG5425	PFAM Usg family protein
FQ775_RS07800	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FQ775_RS07805	COG0459	protein refolding
FQ775_RS07815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FQ775_RS07845	COG1686	Belongs to the peptidase S11 family
FQ775_RS07850	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FQ775_RS07860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ775_RS07865	COG0084	hydrolase, TatD family'
FQ775_RS07870	COG0321	lipoyl(octanoyl) transferase activity
FQ775_RS07870	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FQ775_RS07880	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FQ775_RS07885	COG0589	response to stress
FQ775_RS07910	COG1278	Cold shock
FQ775_RS07920	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FQ775_RS07940	COG0154	amidase activity
FQ775_RS07945	COG0667	Aldo Keto reductase
FQ775_RS07975	COG2068	MobA-Related Protein
FQ775_RS07980	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FQ775_RS07980	COG3608	succinylglutamate desuccinylase aspartoacylase
FQ775_RS08000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FQ775_RS08010	COG3191	aminopeptidase activity
FQ775_RS08025	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FQ775_RS08045	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FQ775_RS08050	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FQ775_RS08055	COG0047	phosphoribosylformylglycinamidine synthase activity
FQ775_RS08065	COG2072	flavoprotein involved in K transport
FQ775_RS08085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ775_RS08090	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FQ775_RS08100	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FQ775_RS08110	COG0037	tRNA processing
FQ775_RS08115	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FQ775_RS08135	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FQ775_RS08150	COG0596	Alpha beta hydrolase
FQ775_RS08155	COG0538	isocitrate dehydrogenase activity
FQ775_RS08165	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FQ775_RS08200	COG0625	glutathione transferase activity
FQ775_RS08220	COG0415	Belongs to the DNA photolyase family
FQ775_RS08235	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FQ775_RS08260	COG0747	negative chemotaxis
FQ775_RS08285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS08290	COG0601	transmembrane transport
FQ775_RS08305	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FQ775_RS08310	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FQ775_RS08315	COG0418	dihydroorotase activity
FQ775_RS08335	COG0673	inositol 2-dehydrogenase activity
FQ775_RS08345	COG1082	Xylose isomerase domain protein TIM barrel
FQ775_RS08350	COG4948	Mandelate Racemase Muconate Lactonizing
FQ775_RS08360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FQ775_RS08365	COG0625	glutathione transferase activity
FQ775_RS08370	COG3842	ATPase activity
FQ775_RS08375	COG3842	ATPase activity
FQ775_RS08390	COG1175	transmembrane transport
FQ775_RS08405	COG5441	Belongs to the UPF0261 family
FQ775_RS08410	COG5564	TIM-barrel signal transduction protein
FQ775_RS08420	COG1959	2 iron, 2 sulfur cluster binding
FQ775_RS08430	COG2239	Acts as a magnesium transporter
FQ775_RS08450	COG0321	lipoyl(octanoyl) transferase activity
FQ775_RS08455	COG0405	Gamma-glutamyltransferase
FQ775_RS08465	COG1136	(ABC) transporter
FQ775_RS08475	COG0442	prolyl-tRNA aminoacylation
FQ775_RS08485	COG0346	lactoylglutathione lyase activity
FQ775_RS08500	COG1007	ATP synthesis coupled electron transport
FQ775_RS08515	COG0713	ATP synthesis coupled electron transport
FQ775_RS08525	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FQ775_RS08535	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FQ775_RS08545	COG3743	rRNA binding
FQ775_RS08545	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FQ775_RS08550	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FQ775_RS08555	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FQ775_RS08575	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FQ775_RS08580	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FQ775_RS08585	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FQ775_RS08590	COG3214	Protein conserved in bacteria
FQ775_RS08595	COG1858	cytochrome C peroxidase
FQ775_RS08605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ775_RS08620	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FQ775_RS08625	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FQ775_RS08635	COG2721	sulfolactate sulfo-lyase activity
FQ775_RS08650	COG0673	inositol 2-dehydrogenase activity
FQ775_RS08670	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ775_RS08690	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FQ775_RS08700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FQ775_RS08705	COG1063	alcohol dehydrogenase
FQ775_RS08715	COG3302	dmso reductase anchor subunit
FQ775_RS08720	COG0437	4 iron, 4 sulfur cluster binding
FQ775_RS08725	COG0243	molybdopterin cofactor binding
FQ775_RS08745	COG0747	negative chemotaxis
FQ775_RS08810	COG0006	proline dipeptidase activity
FQ775_RS08825	COG0778	Nitroreductase
FQ775_RS08830	COG0006	proline dipeptidase activity
FQ775_RS08850	COG0646	methionine synthase
FQ775_RS08850	COG1410	methionine synthase
FQ775_RS08855	COG2304	oxidoreductase activity
FQ775_RS08895	COG5598	trimethylamine methyltransferase
FQ775_RS08900	COG5012	cobalamin binding
FQ775_RS08930	COG1410	methionine synthase
FQ775_RS08930	COG0646	methionine synthase
FQ775_RS08955	COG0583	DNA-binding transcription factor activity
FQ775_RS09010	COG0424	maF-like protein
FQ775_RS09015	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FQ775_RS09025	COG5328	Belongs to the UPF0262 family
FQ775_RS09030	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FQ775_RS09040	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FQ775_RS09090	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FQ775_RS09100	COG3264	Mechanosensitive ion channel
FQ775_RS09100	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FQ775_RS09105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS09115	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ775_RS09115	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ775_RS09130	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS09135	COG1309	transcriptional regulator
FQ775_RS09155	COG0840	transmembrane signaling receptor activity
FQ775_RS09160	COG1858	cytochrome C peroxidase
FQ775_RS09175	COG4603	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS09185	COG0402	S-adenosylhomocysteine deaminase activity
FQ775_RS09200	COG0384	phenazine biosynthesis protein PhzF
FQ775_RS09220	COG1175	transmembrane transport
FQ775_RS09235	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS09240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FQ775_RS09245	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FQ775_RS09305	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FQ775_RS09310	COG1309	transcriptional regulator
FQ775_RS09315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ775_RS09320	COG1733	regulation of RNA biosynthetic process
FQ775_RS09335	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FQ775_RS09350	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FQ775_RS09395	COG4964	Belongs to the GSP D family
FQ775_RS09405	COG0187	DNA topoisomerase II activity
FQ775_RS09425	COG2301	Belongs to the HpcH HpaI aldolase family
FQ775_RS09430	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FQ775_RS09450	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FQ775_RS09455	COG3422	double-strand break repair
FQ775_RS09460	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FQ775_RS09480	COG0302	gtp cyclohydrolase
FQ775_RS09485	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FQ775_RS09490	COG1752	Esterase of the alpha-beta hydrolase superfamily
FQ775_RS09495	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FQ775_RS09500	COG1494	fructose-1,6-bisphosphatase
FQ775_RS09510	COG0436	Aminotransferase
FQ775_RS09520	COG3243	poly(R)-hydroxyalkanoic acid synthase
FQ775_RS09535	COG0024	Methionine aminopeptidase
FQ775_RS09540	COG2003	Belongs to the UPF0758 family
FQ775_RS09560	COG0544	peptidyl-prolyl cis-trans isomerase activity
FQ775_RS09590	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FQ775_RS09600	COG1024	Enoyl-CoA hydratase
FQ775_RS09635	COG1862	Preprotein translocase
FQ775_RS09650	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FQ775_RS09655	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FQ775_RS09660	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FQ775_RS09665	COG0805	protein transport
FQ775_RS09670	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FQ775_RS09675	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FQ775_RS09680	COG3842	ATPase activity
FQ775_RS09685	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FQ775_RS09690	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FQ775_RS09705	COG0018	arginyl-trna synthetase
FQ775_RS09710	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FQ775_RS09715	COG0316	Belongs to the HesB IscA family
FQ775_RS09720	COG0708	Exodeoxyribonuclease III
FQ775_RS09730	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FQ775_RS09740	COG0525	valine-tRNA ligase activity
FQ775_RS09755	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FQ775_RS09810	COG0440	acetolactate synthase activity
FQ775_RS09820	COG0028	Belongs to the TPP enzyme family
FQ775_RS09835	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FQ775_RS09860	COG0330	HflC and HflK could
FQ775_RS09865	COG0330	HflC and HflK could
FQ775_RS09895	COG1024	Enoyl-CoA hydratase
FQ775_RS09930	COG0277	FAD linked oxidase domain protein
FQ775_RS09940	COG0038	chloride channel
FQ775_RS09945	COG3706	GGDEF domain
FQ775_RS09950	COG0412	Dienelactone hydrolase
FQ775_RS09955	COG0640	Transcriptional regulator
FQ775_RS09970	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FQ775_RS09975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ775_RS10005	COG1846	Transcriptional regulator
FQ775_RS10045	COG1942	4-Oxalocrotonate Tautomerase
FQ775_RS10050	COG3189	MarR family transcriptional regulator
FQ775_RS10070	COG1999	signal sequence binding
FQ775_RS10080	COG2264	protein methyltransferase activity
FQ775_RS10090	COG0006	proline dipeptidase activity
FQ775_RS10090	COG0006	proline dipeptidase activity
FQ775_RS10110	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FQ775_RS10120	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ775_RS10130	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FQ775_RS10135	COG0849	cell division
FQ775_RS10140	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FQ775_RS10145	COG1181	Belongs to the D-alanine--D-alanine ligase family
FQ775_RS10150	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FQ775_RS10155	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FQ775_RS10160	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FQ775_RS10170	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FQ775_RS10175	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FQ775_RS10185	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FQ775_RS10200	COG0275	rRNA processing
FQ775_RS10205	COG2001	Belongs to the MraZ family
FQ775_RS10210	COG0626	cystathionine gamma-synthase activity
FQ775_RS10230	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FQ775_RS10270	COG3769	mannosylglycerate metabolic process
FQ775_RS10275	COG1215	transferase activity, transferring glycosyl groups
FQ775_RS10280	COG0366	Alpha amylase catalytic
FQ775_RS10290	COG4106	trans-aconitate 2-methyltransferase activity
FQ775_RS10320	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FQ775_RS10330	COG1720	tRNA m6t6A37 methyltransferase activity
FQ775_RS10400	COG2267	carboxylic ester hydrolase activity
FQ775_RS10405	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS10410	COG0028	Belongs to the TPP enzyme family
FQ775_RS10425	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FQ775_RS10430	COG2151	metal-sulfur cluster biosynthetic enzyme
FQ775_RS10435	COG3396	Phenylacetate-CoA oxygenase
FQ775_RS10440	COG3460	Phenylacetate-CoA oxygenase
FQ775_RS10445	COG3396	Phenylacetate-CoA oxygenase
FQ775_RS10455	COG3327	negative regulation of DNA-templated transcription, initiation
FQ775_RS10475	COG2050	protein possibly involved in aromatic compounds catabolism
FQ775_RS10480	COG2124	cytochrome p450
FQ775_RS10485	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS10485	COG2030	dehydratase
FQ775_RS10490	COG2814	Major facilitator Superfamily
FQ775_RS10495	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FQ775_RS10500	COG3485	protocatechuate 3,4-dioxygenase
FQ775_RS10505	COG3485	protocatechuate 3,4-dioxygenase
FQ775_RS10510	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ775_RS10515	COG0583	DNA-binding transcription factor activity
FQ775_RS10535	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ775_RS10540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS10545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS10580	COG1309	transcriptional regulator
FQ775_RS10600	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ775_RS10625	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ775_RS10635	COG0493	'glutamate synthase
FQ775_RS10640	COG0702	epimerase
FQ775_RS10655	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS10660	COG0601	transmembrane transport
FQ775_RS10665	COG0747	negative chemotaxis
FQ775_RS10675	COG0729	surface antigen
FQ775_RS10680	COG2249	NAD(P)H dehydrogenase (quinone) activity
FQ775_RS10685	COG2373	Large extracellular alpha-helical protein
FQ775_RS10690	COG4953	penicillin-binding protein 1C
FQ775_RS10695	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FQ775_RS10730	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ775_RS10740	COG0583	DNA-binding transcription factor activity
FQ775_RS10745	COG4191	Histidine kinase
FQ775_RS10755	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS10760	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FQ775_RS10765	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS10785	COG0431	NADPH-dependent FMN reductase
FQ775_RS10790	COG1393	Belongs to the ArsC family
FQ775_RS10810	COG1396	sequence-specific DNA binding
FQ775_RS10815	COG0456	acetyltransferase
FQ775_RS10830	COG1309	transcriptional regulator
FQ775_RS10900	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS10905	COG1454	alcohol dehydrogenase
FQ775_RS10905	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS10910	COG1024	Enoyl-CoA hydratase
FQ775_RS10920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS10930	COG2070	2-Nitropropane dioxygenase
FQ775_RS10970	COG1024	Enoyl-CoA hydratase
FQ775_RS11010	COG2968	Membrane
FQ775_RS11035	COG2983	Belongs to the UPF0260 family
FQ775_RS11045	COG2176	DNA-directed DNA polymerase activity
FQ775_RS11070	COG0300	oxidoreductase activity
FQ775_RS11075	COG1047	Peptidyl-prolyl cis-trans
FQ775_RS11080	COG2197	response regulator
FQ775_RS11085	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FQ775_RS11110	COG1132	(ABC) transporter
FQ775_RS11120	COG0432	Pfam Uncharacterised protein family UPF0047
FQ775_RS11150	COG1309	transcriptional regulator
FQ775_RS11165	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FQ775_RS11175	COG5001	Diguanylate cyclase
FQ775_RS11175	COG3300	MHYT domain
FQ775_RS11180	COG1283	sodium-dependent phosphate transmembrane transporter activity
FQ775_RS11195	COG0505	Belongs to the CarA family
FQ775_RS11215	COG3706	GGDEF domain
FQ775_RS11225	COG2321	neutral zinc metallopeptidase
FQ775_RS11250	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FQ775_RS11290	COG2070	2-Nitropropane dioxygenase
FQ775_RS11295	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FQ775_RS11300	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FQ775_RS11355	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FQ775_RS11365	COG1278	Cold shock
FQ775_RS11370	COG2084	Dehydrogenase
FQ775_RS11375	COG0625	glutathione transferase activity
FQ775_RS11380	COG2199	diguanylate cyclase activity
FQ775_RS11380	COG2200	EAL domain
FQ775_RS11390	COG0436	Aminotransferase
FQ775_RS11405	COG3795	YCII-related domain
FQ775_RS11415	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FQ775_RS11425	COG0583	DNA-binding transcription factor activity
FQ775_RS11430	COG0492	ferredoxin-NADP+ reductase activity
FQ775_RS11435	COG1522	sequence-specific DNA binding
FQ775_RS11450	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ775_RS11460	COG2133	pyrroloquinoline quinone binding
FQ775_RS11485	COG0596	Alpha beta hydrolase
FQ775_RS11525	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FQ775_RS11530	COG4948	Mandelate Racemase Muconate Lactonizing
FQ775_RS11555	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FQ775_RS11560	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS11595	COG0277	FAD linked oxidase domain protein
FQ775_RS11615	COG2771	luxR family
FQ775_RS11640	COG2226	methyltransferase
FQ775_RS11645	COG0556	nucleotide-excision repair
FQ775_RS11655	COG2843	Capsule synthesis protein
FQ775_RS11670	COG1278	Cold shock
FQ775_RS11680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FQ775_RS11690	COG1522	sequence-specific DNA binding
FQ775_RS11695	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FQ775_RS11710	COG1846	Transcriptional regulator
FQ775_RS11715	COG0745	RESPONSE REGULATOR receiver
FQ775_RS11720	COG2205	protein histidine kinase activity
FQ775_RS11725	COG1363	Peptidase, m42
FQ775_RS11735	COG0367	asparagine synthase
FQ775_RS11750	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ775_RS11765	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FQ775_RS11790	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FQ775_RS11805	COG0583	DNA-binding transcription factor activity
FQ775_RS11825	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FQ775_RS11830	COG0193	aminoacyl-tRNA hydrolase activity
FQ775_RS11835	COG0012	GTP binding
FQ775_RS11845	COG2890	protein-(glutamine-N5) methyltransferase activity
FQ775_RS11880	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FQ775_RS11885	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FQ775_RS11885	COG2857	Cytochrome c1
FQ775_RS11910	COG1132	(ABC) transporter
FQ775_RS11915	COG1132	(ABC) transporter
FQ775_RS11925	COG0789	Transcriptional regulator
FQ775_RS11935	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FQ775_RS11945	COG0408	coproporphyrinogen oxidase activity
FQ775_RS11955	COG0617	tRNA 3'-terminal CCA addition
FQ775_RS11960	COG0494	nUDIX hydrolase
FQ775_RS11970	COG0714	Associated with various cellular activities
FQ775_RS11995	COG0435	Glutathione S-transferase
FQ775_RS12000	COG0494	nUDIX hydrolase
FQ775_RS12020	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ775_RS12020	COG0596	Alpha beta hydrolase
FQ775_RS12025	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FQ775_RS12050	COG2226	methyltransferase
FQ775_RS12050	COG0596	Alpha beta hydrolase
FQ775_RS12050	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FQ775_RS12060	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS12065	COG0183	Belongs to the thiolase family
FQ775_RS12070	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS12130	COG1522	sequence-specific DNA binding
FQ775_RS12160	COG1063	alcohol dehydrogenase
FQ775_RS12165	COG0156	8-amino-7-oxononanoate synthase activity
FQ775_RS12170	COG3706	GGDEF domain
FQ775_RS12175	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS12185	COG1902	pentaerythritol trinitrate reductase activity
FQ775_RS12185	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ775_RS12200	COG4948	Mandelate Racemase Muconate Lactonizing
FQ775_RS12205	COG5598	trimethylamine methyltransferase
FQ775_RS12210	COG0583	DNA-binding transcription factor activity
FQ775_RS12220	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FQ775_RS12230	COG1663	tetraacyldisaccharide 4'-kinase activity
FQ775_RS12235	COG1519	Transferase
FQ775_RS12255	COG0312	modulator of DNA gyrase
FQ775_RS12260	COG0475	glutathione-regulated potassium exporter activity
FQ775_RS12260	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FQ775_RS12280	COG0612	Peptidase, M16
FQ775_RS12285	COG0612	Peptidase, M16
FQ775_RS12290	COG0742	ribosomal rna small subunit methyltransferase
FQ775_RS12300	COG0590	tRNA wobble adenosine to inosine editing
FQ775_RS12310	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FQ775_RS12335	COG0196	riboflavin kinase activity
FQ775_RS12360	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FQ775_RS12370	COG1253	flavin adenine dinucleotide binding
FQ775_RS12380	COG1404	Belongs to the peptidase S8 family
FQ775_RS12395	COG4941	Belongs to the sigma-70 factor family
FQ775_RS12400	COG3795	YCII-related domain
FQ775_RS12410	COG0114	fumarate hydratase activity
FQ775_RS12415	COG2259	Doxx family
FQ775_RS12425	COG3685	Protein conserved in bacteria
FQ775_RS12430	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FQ775_RS12440	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FQ775_RS12445	COG0124	histidyl-tRNA synthetase
FQ775_RS12450	COG2818	Glycosylase
FQ775_RS12455	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS12470	COG0247	lactate metabolic process
FQ775_RS12490	COG0277	FAD linked oxidase domain protein
FQ775_RS12495	COG0583	DNA-binding transcription factor activity
FQ775_RS12505	COG2186	Transcriptional regulator
FQ775_RS12515	COG0247	lactate metabolic process
FQ775_RS12570	COG0443	Heat shock 70 kDa protein
FQ775_RS12590	COG0583	DNA-binding transcription factor activity
FQ775_RS12595	COG0154	amidase activity
FQ775_RS12600	COG1570	exodeoxyribonuclease VII activity
FQ775_RS12615	COG5490	Phasin protein
FQ775_RS12620	COG2205	protein histidine kinase activity
FQ775_RS12625	COG1840	ABC-type Fe3 transport system, periplasmic component
FQ775_RS12630	COG1178	ABC-type Fe3 transport system permease component
FQ775_RS12635	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ775_RS12650	COG1177	transmembrane transport
FQ775_RS12655	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS12660	COG3842	ATPase activity
FQ775_RS12670	COG0174	glutamine synthetase
FQ775_RS12675	COG1254	Belongs to the acylphosphatase family
FQ775_RS12680	COG0604	alcohol dehydrogenase
FQ775_RS12690	COG0596	Alpha beta hydrolase
FQ775_RS12695	COG1396	sequence-specific DNA binding
FQ775_RS12695	COG3800	Transcriptional regulator
FQ775_RS12700	COG2224	Isocitrate lyase
FQ775_RS12725	COG0174	glutamine synthetase
FQ775_RS12735	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS12740	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ775_RS12755	COG0490	domain, Protein
FQ775_RS12755	COG0471	metal ion transport
FQ775_RS12765	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS12770	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FQ775_RS12775	COG0363	glucosamine-6-phosphate deaminase activity
FQ775_RS12780	COG0129	dihydroxy-acid dehydratase activity
FQ775_RS12810	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FQ775_RS12830	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FQ775_RS12860	COG5642	Protein of unknown function (DUF2384)
FQ775_RS12870	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FQ775_RS12890	COG1492	cobalamin metabolic process
FQ775_RS12980	COG1797	cobyrinic acid a,c-diamide synthase activity
FQ775_RS12985	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FQ775_RS12990	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FQ775_RS13005	COG1024	Enoyl-CoA hydratase
FQ775_RS13010	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FQ775_RS13025	COG0367	asparagine synthase
FQ775_RS13040	COG0523	cobalamin synthesis protein
FQ775_RS13045	COG3634	alkyl hydroperoxide reductase activity
FQ775_RS13050	COG3443	Belongs to the bacterial solute-binding protein 9 family
FQ775_RS13055	COG0803	Belongs to the bacterial solute-binding protein 9 family
FQ775_RS13060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FQ775_RS13065	COG1121	(ABC) transporter
FQ775_RS13070	COG0735	belongs to the Fur family
FQ775_RS13080	COG3842	ATPase activity
FQ775_RS13095	COG0395	ABC-type sugar transport system, permease component
FQ775_RS13100	COG1175	transmembrane transport
FQ775_RS13110	COG1609	Transcriptional regulator
FQ775_RS13135	COG1802	Transcriptional regulator
FQ775_RS13145	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS13155	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS13160	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FQ775_RS13165	COG0159	tryptophan synthase activity
FQ775_RS13170	COG1324	tolerance protein
FQ775_RS13180	COG0133	tryptophan synthase activity
FQ775_RS13190	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FQ775_RS13195	COG1879	ABC-type sugar transport system periplasmic component
FQ775_RS13200	COG1129	ABC transporter
FQ775_RS13205	COG4214	carbohydrate transport
FQ775_RS13235	COG3246	L-lysine catabolic process to acetate
FQ775_RS13240	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ775_RS13245	COG3842	ATPase activity
FQ775_RS13255	COG1177	transmembrane transport
FQ775_RS13265	COG0583	DNA-binding transcription factor activity
FQ775_RS13270	COG0179	Fumarylacetoacetate (FAA) hydrolase
FQ775_RS13280	COG1802	Transcriptional regulator
FQ775_RS13285	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS13290	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS13300	COG0673	inositol 2-dehydrogenase activity
FQ775_RS13305	COG1312	Catalyzes the dehydration of D-mannonate
FQ775_RS13340	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS13355	COG0482	sulfurtransferase activity
FQ775_RS13385	COG1846	Transcriptional regulator
FQ775_RS13390	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS13400	COG0583	DNA-binding transcription factor activity
FQ775_RS13405	COG2207	Transcriptional regulator
FQ775_RS13415	COG1129	ABC transporter
FQ775_RS13445	COG0625	glutathione transferase activity
FQ775_RS13450	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FQ775_RS13460	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FQ775_RS13470	COG3457	Alanine racemase
FQ775_RS13475	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS13490	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS13495	COG1940	carbohydrate kinase activity
FQ775_RS13510	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS13515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS13520	COG0601	transmembrane transport
FQ775_RS13525	COG0747	negative chemotaxis
FQ775_RS13535	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FQ775_RS13545	COG1846	Transcriptional regulator
FQ775_RS13585	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS13595	COG1414	Transcriptional regulator
FQ775_RS13600	COG3384	dioxygenase
FQ775_RS13615	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FQ775_RS13635	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS13650	COG1846	Transcriptional regulator
FQ775_RS13695	COG0640	Transcriptional regulator
FQ775_RS13705	COG0785	Cytochrome C biogenesis protein
FQ775_RS13740	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FQ775_RS13755	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ775_RS13760	COG2391	methyltransferase activity
FQ775_RS13765	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ775_RS13770	COG0006	proline dipeptidase activity
FQ775_RS13775	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS13780	COG1522	sequence-specific DNA binding
FQ775_RS13785	COG2423	ornithine cyclodeaminase activity
FQ775_RS13790	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FQ775_RS13795	COG1126	abc transporter atp-binding protein
FQ775_RS13800	COG0765	amino acid transport
FQ775_RS13805	COG0765	amino acid transport
FQ775_RS13810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS13815	COG0006	proline dipeptidase activity
FQ775_RS13820	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS13830	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS13855	COG0668	transmembrane transport
FQ775_RS13885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS13910	COG0668	transmembrane transport
FQ775_RS13915	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FQ775_RS13940	COG0534	Mate efflux family protein
FQ775_RS13945	COG2771	luxR family
FQ775_RS13960	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FQ775_RS13965	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FQ775_RS13970	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FQ775_RS13975	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FQ775_RS13980	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FQ775_RS13990	COG4786	Flagellar basal body rod
FQ775_RS13995	COG1157	protein secretion by the type III secretion system
FQ775_RS14010	COG1558	bacterial-type flagellum-dependent cell motility
FQ775_RS14015	COG1677	Flagellar hook-basal body complex protein FliE
FQ775_RS14020	COG4786	Flagellar basal body rod
FQ775_RS14025	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FQ775_RS14030	COG1706	bacterial-type flagellum-dependent cell motility
FQ775_RS14040	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FQ775_RS14050	COG1338	Plays a role in the flagellum-specific transport system
FQ775_RS14055	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ775_RS14060	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ775_RS14100	COG1749	Flagellar hook protein flgE
FQ775_RS14115	COG5442	Flagellar protein FlaF
FQ775_RS14120	COG5443	negative regulation of bacterial-type flagellum assembly
FQ775_RS14125	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FQ775_RS14130	COG1987	bacterial-type flagellum assembly
FQ775_RS14135	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FQ775_RS14170	COG1024	Enoyl-CoA hydratase
FQ775_RS14175	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS14205	COG0183	Belongs to the thiolase family
FQ775_RS14220	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS14225	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FQ775_RS14230	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14245	COG3153	acetyltransferase
FQ775_RS14255	COG0154	amidase activity
FQ775_RS14260	COG0583	DNA-binding transcription factor activity
FQ775_RS14275	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ775_RS14285	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14300	COG3795	YCII-related domain
FQ775_RS14305	COG0471	metal ion transport
FQ775_RS14305	COG3273	potassium ion transport
FQ775_RS14310	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14335	COG0800	Aldolase
FQ775_RS14340	COG3108	Peptidase M15
FQ775_RS14345	COG2204	response regulator
FQ775_RS14365	COG0129	dihydroxy-acid dehydratase activity
FQ775_RS14375	COG5310	Homospermidine synthase
FQ775_RS14390	COG0737	Belongs to the 5'-nucleotidase family
FQ775_RS14395	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FQ775_RS14405	COG0330	HflC and HflK could
FQ775_RS14420	COG0517	IMP dehydrogenase activity
FQ775_RS14420	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FQ775_RS14430	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FQ775_RS14435	COG2951	lytic endotransglycosylase activity
FQ775_RS14450	COG0070	glutamate synthase
FQ775_RS14450	COG0069	glutamate synthase activity
FQ775_RS14450	COG0067	glutamate synthase
FQ775_RS14465	COG3220	belongs to the UPF0276 family
FQ775_RS14475	COG2259	Doxx family
FQ775_RS14480	COG0071	Belongs to the small heat shock protein (HSP20) family
FQ775_RS14540	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14555	COG3220	belongs to the UPF0276 family
FQ775_RS14575	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FQ775_RS14580	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FQ775_RS14580	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FQ775_RS14600	COG4974	Belongs to the 'phage' integrase family
FQ775_RS14615	COG1053	succinate dehydrogenase
FQ775_RS14630	COG1805	sodium ion transport
FQ775_RS14635	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ775_RS14640	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ775_RS14645	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ775_RS14650	COG2871	sodium ion transport
FQ775_RS14655	COG1477	protein flavinylation
FQ775_RS14665	COG0517	IMP dehydrogenase activity
FQ775_RS14665	COG0617	tRNA 3'-terminal CCA addition
FQ775_RS14665	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FQ775_RS14670	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14675	COG0589	response to stress
FQ775_RS14690	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14695	COG1802	Transcriptional regulator
FQ775_RS14700	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS14715	COG3706	GGDEF domain
FQ775_RS14730	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FQ775_RS14750	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FQ775_RS14775	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FQ775_RS14800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ775_RS14805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ775_RS14815	COG1022	Amp-dependent synthetase and ligase
FQ775_RS14835	COG0559	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS14845	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14845	COG0604	alcohol dehydrogenase
FQ775_RS14845	COG3321	synthase
FQ775_RS14850	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS14855	COG1309	transcriptional regulator
FQ775_RS14880	COG3795	YCII-related domain
FQ775_RS14885	COG4941	Belongs to the sigma-70 factor family
FQ775_RS14895	COG3795	YCII-related domain
FQ775_RS14900	COG0477	Major facilitator Superfamily
FQ775_RS14915	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ775_RS14915	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ775_RS14930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS14935	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS14945	COG2226	methyltransferase
FQ775_RS14950	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FQ775_RS15005	COG2072	flavoprotein involved in K transport
FQ775_RS15010	COG0385	Bile acid
FQ775_RS15015	COG2186	Transcriptional regulator
FQ775_RS15020	COG1129	ABC transporter
FQ775_RS15025	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS15030	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS15035	COG1879	ABC-type sugar transport system periplasmic component
FQ775_RS15040	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS15045	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FQ775_RS15060	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS15065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS15080	COG0251	oxidation-reduction process
FQ775_RS15095	COG3118	belongs to the thioredoxin family
FQ775_RS15120	COG0071	Belongs to the small heat shock protein (HSP20) family
FQ775_RS15130	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS15145	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ775_RS15150	COG2937	Belongs to the GPAT DAPAT family
FQ775_RS15210	COG0559	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS15225	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ775_RS15235	COG5001	Diguanylate cyclase
FQ775_RS15255	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FQ775_RS15260	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FQ775_RS15265	COG1106	Psort location Cytoplasmic, score
FQ775_RS15310	COG3794	PFAM blue (type 1) copper domain protein
FQ775_RS15325	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FQ775_RS15340	COG1609	Transcriptional regulator
FQ775_RS15345	COG0697	spore germination
FQ775_RS15350	COG1846	Transcriptional regulator
FQ775_RS15375	COG0523	cobalamin synthesis protein
FQ775_RS15385	COG3622	Belongs to the hyi family
FQ775_RS15390	COG0402	S-adenosylhomocysteine deaminase activity
FQ775_RS15415	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FQ775_RS15425	COG2351	hydroxyisourate hydrolase activity
FQ775_RS15435	COG3257	ureidoglycine aminohydrolase activity
FQ775_RS15440	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FQ775_RS15495	COG0045	succinate-CoA ligase (ADP-forming) activity
FQ775_RS15505	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS15510	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ775_RS15515	COG3246	L-lysine catabolic process to acetate
FQ775_RS15535	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FQ775_RS15545	COG1414	Transcriptional regulator
FQ775_RS15560	COG3842	ATPase activity
FQ775_RS15565	COG0395	ABC-type sugar transport system, permease component
FQ775_RS15570	COG1175	transmembrane transport
FQ775_RS15585	COG0246	Mannitol dehydrogenase
FQ775_RS15590	COG1312	Catalyzes the dehydration of D-mannonate
FQ775_RS15595	COG4335	DNA alkylation repair
FQ775_RS15605	COG2115	Belongs to the xylose isomerase family
FQ775_RS15615	COG1070	Carbohydrate kinase
FQ775_RS15635	COG1280	lysine exporter protein (LysE YggA)
FQ775_RS15640	COG0596	Alpha beta hydrolase
FQ775_RS15665	COG1845	cytochrome c oxidase, subunit III
FQ775_RS15670	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FQ775_RS15675	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FQ775_RS15705	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS15765	COG1475	DNA binding
FQ775_RS15795	COG1061	Type III restriction enzyme res subunit
FQ775_RS15855	COG1205	dead DEAH box helicase
FQ775_RS15855	COG1111	helicase
FQ775_RS15890	COG0739	heme binding
FQ775_RS15890	COG1196	nuclear chromosome segregation
FQ775_RS15890	COG0741	lytic transglycosylase activity
FQ775_RS15895	COG0477	Major facilitator Superfamily
FQ775_RS15905	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS15935	COG0436	Aminotransferase
FQ775_RS15940	COG1802	Transcriptional regulator
FQ775_RS15955	COG1309	transcriptional regulator
FQ775_RS15965	COG0542	response to heat
FQ775_RS15975	COG2890	protein-(glutamine-N5) methyltransferase activity
FQ775_RS15980	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FQ775_RS15990	COG0527	aspartate kinase activity
FQ775_RS15995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ775_RS16015	COG1040	competence protein
FQ775_RS16020	COG2226	methyltransferase
FQ775_RS16035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ775_RS16045	COG1238	metal cluster binding
FQ775_RS16065	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FQ775_RS16075	COG0697	spore germination
FQ775_RS16105	COG2086	electron transfer activity
FQ775_RS16110	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FQ775_RS16115	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ775_RS16120	COG3706	GGDEF domain
FQ775_RS16125	COG3706	GGDEF domain
FQ775_RS16150	COG2884	Cell division ATP-binding protein ftsE
FQ775_RS16185	COG0287	Prephenate dehydrogenase
FQ775_RS16190	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FQ775_RS16195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FQ775_RS16215	COG2226	methyltransferase
FQ775_RS16220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FQ775_RS16240	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FQ775_RS16285	COG4536	flavin adenine dinucleotide binding
FQ775_RS16290	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FQ775_RS16295	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FQ775_RS16310	COG0825	malonyl-CoA metabolic process
FQ775_RS16320	COG0425	Belongs to the sulfur carrier protein TusA family
FQ775_RS16320	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ775_RS16325	COG0523	cobalamin synthesis protein
FQ775_RS16330	COG1686	Belongs to the peptidase S11 family
FQ775_RS16335	COG1473	amidohydrolase
FQ775_RS16350	COG0640	Transcriptional regulator
FQ775_RS16370	COG0395	ABC-type sugar transport system, permease component
FQ775_RS16375	COG3842	ATPase activity
FQ775_RS16380	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS16400	COG0346	lactoylglutathione lyase activity
FQ775_RS16435	COG1129	ABC transporter
FQ775_RS16440	COG4214	carbohydrate transport
FQ775_RS16445	COG4213	ABC transporter substrate-binding protein
FQ775_RS16465	COG0745	RESPONSE REGULATOR receiver
FQ775_RS16470	COG0704	Plays a role in the regulation of phosphate uptake
FQ775_RS16475	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FQ775_RS16485	COG0573	inorganic phosphate transmembrane transporter activity
FQ775_RS16500	COG0653	protein targeting
FQ775_RS16505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FQ775_RS16510	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FQ775_RS16515	COG0456	acetyltransferase
FQ775_RS16520	COG0494	nUDIX hydrolase
FQ775_RS16535	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS16540	COG0427	acetyl-CoA hydrolase
FQ775_RS16545	COG1024	Enoyl-CoA hydratase
FQ775_RS16545	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ775_RS16555	COG3485	protocatechuate 3,4-dioxygenase
FQ775_RS16585	COG1137	ATPase activity
FQ775_RS16600	COG3485	protocatechuate 3,4-dioxygenase
FQ775_RS16605	COG0583	DNA-binding transcription factor activity
FQ775_RS16610	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ775_RS16615	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ775_RS16620	COG1116	anion transmembrane transporter activity
FQ775_RS16625	COG3618	amidohydrolase
FQ775_RS16635	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FQ775_RS16640	COG0163	prenyltransferase activity
FQ775_RS16645	COG0523	cobalamin synthesis protein
FQ775_RS16650	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FQ775_RS16650	COG2080	2 iron, 2 sulfur cluster binding
FQ775_RS16660	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FQ775_RS16670	COG0402	S-adenosylhomocysteine deaminase activity
FQ775_RS16695	COG0583	DNA-binding transcription factor activity
FQ775_RS16725	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FQ775_RS16755	COG2010	Cytochrome c
FQ775_RS16785	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FQ775_RS16800	COG4459	periplasmic nitrate reductase
FQ775_RS16825	COG3005	denitrification pathway
FQ775_RS16830	COG3794	PFAM blue (type 1) copper domain protein
FQ775_RS16835	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ775_RS16850	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FQ775_RS16850	COG3743	rRNA binding
FQ775_RS16855	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FQ775_RS16865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ775_RS16885	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FQ775_RS16890	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FQ775_RS16895	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FQ775_RS16900	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FQ775_RS16910	COG0799	negative regulation of ribosome biogenesis
FQ775_RS16915	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FQ775_RS16925	COG0793	Belongs to the peptidase S41A family
FQ775_RS16935	COG0494	nUDIX hydrolase
FQ775_RS16950	COG2032	superoxide dismutase activity
FQ775_RS16955	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FQ775_RS16965	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FQ775_RS16970	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FQ775_RS16975	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FQ775_RS16980	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FQ775_RS17025	COG0495	leucyl-tRNA aminoacylation
FQ775_RS17045	COG1309	transcriptional regulator
FQ775_RS17050	COG5425	PFAM Usg family protein
FQ775_RS17065	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ775_RS17085	COG0501	Belongs to the peptidase M48B family
FQ775_RS17100	COG0138	bifunctional purine biosynthesis protein purh
FQ775_RS17110	COG2902	Dehydrogenase
FQ775_RS17130	COG1309	transcriptional regulator
FQ775_RS17145	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FQ775_RS17160	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FQ775_RS17165	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FQ775_RS17175	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FQ775_RS17185	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FQ775_RS17190	COG0564	pseudouridine synthase activity
FQ775_RS17220	COG1404	Belongs to the peptidase S8 family
FQ775_RS17225	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FQ775_RS17230	COG0037	tRNA processing
FQ775_RS17240	COG2885	chlorophyll binding
FQ775_RS17245	COG0823	Involved in the tonB-independent uptake of proteins
FQ775_RS17255	COG0848	biopolymer transport protein
FQ775_RS17265	COG0824	Thioesterase
FQ775_RS17280	COG2255	four-way junction helicase activity
FQ775_RS17290	COG0632	four-way junction helicase activity
FQ775_RS17295	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FQ775_RS17310	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS17320	COG0352	thiamine-phosphate diphosphorylase activity
FQ775_RS17330	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FQ775_RS17335	COG0483	inositol monophosphate 1-phosphatase activity
FQ775_RS17340	COG1272	protein, Hemolysin III
FQ775_RS17365	COG2186	Transcriptional regulator
FQ775_RS17375	COG1132	(ABC) transporter
FQ775_RS17400	COG0217	transcriptional regulatory protein
FQ775_RS17410	COG0457	Tetratricopeptide repeat
FQ775_RS17415	COG0861	Integral membrane protein TerC family
FQ775_RS17420	COG1692	metallophosphoesterase
FQ775_RS17425	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FQ775_RS17460	COG0776	regulation of translation
FQ775_RS17495	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS17520	COG3588	fructose-bisphosphate aldolase
FQ775_RS17525	COG0126	phosphoglycerate kinase activity
FQ775_RS17530	COG3263	regulation of cellular component size
FQ775_RS17555	COG3750	Belongs to the UPF0335 family
FQ775_RS17560	COG0604	alcohol dehydrogenase
FQ775_RS17575	COG0640	Transcriptional regulator
FQ775_RS17590	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FQ775_RS17595	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FQ775_RS17600	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FQ775_RS17605	COG0457	Tetratricopeptide repeat
FQ775_RS17630	COG0469	pyruvate kinase activity
FQ775_RS17650	COG1329	Transcriptional regulator
FQ775_RS17655	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FQ775_RS17685	COG0183	Belongs to the thiolase family
FQ775_RS17695	COG0405	Gamma-glutamyltransferase
FQ775_RS17710	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FQ775_RS17715	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FQ775_RS17720	COG0142	geranyltranstransferase activity
FQ775_RS17725	COG2205	protein histidine kinase activity
FQ775_RS17725	COG3437	response regulator, receiver
FQ775_RS17725	COG3850	Histidine kinase
FQ775_RS17725	COG4999	Histidine kinase
FQ775_RS17730	COG0741	lytic transglycosylase activity
FQ775_RS17735	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FQ775_RS17740	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS17750	COG1309	transcriptional regulator
FQ775_RS17760	COG2010	Cytochrome c
FQ775_RS17760	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FQ775_RS17775	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ775_RS17790	COG0583	DNA-binding transcription factor activity
FQ775_RS17795	COG2223	nitrite transmembrane transporter activity
FQ775_RS17800	COG0137	argininosuccinate synthase activity
FQ775_RS17825	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FQ775_RS17835	COG0668	transmembrane transport
FQ775_RS17845	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FQ775_RS17875	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FQ775_RS17880	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FQ775_RS17890	COG4181	ATPase activity
FQ775_RS17900	COG0670	Belongs to the BI1 family
FQ775_RS17930	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FQ775_RS17935	COG4133	protoheme IX ABC transporter activity
FQ775_RS17940	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FQ775_RS17950	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FQ775_RS17960	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FQ775_RS17965	COG0335	large ribosomal subunit rRNA binding
FQ775_RS17975	COG0336	Belongs to the RNA methyltransferase TrmD family
FQ775_RS17980	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FQ775_RS17985	COG4974	Belongs to the 'phage' integrase family
FQ775_RS18020	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS18035	COG1280	lysine exporter protein (LysE YggA)
FQ775_RS18040	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ775_RS18045	COG0567	Dehydrogenase, E1 component
FQ775_RS18050	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FQ775_RS18075	COG0045	succinate-CoA ligase (ADP-forming) activity
FQ775_RS18080	COG0039	L-malate dehydrogenase activity
FQ775_RS18085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FQ775_RS18115	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FQ775_RS18120	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FQ775_RS18125	COG0552	protein localization to endoplasmic reticulum
FQ775_RS18130	COG2917	probably involved in intracellular septation
FQ775_RS18160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ775_RS18165	COG0765	amino acid transport
FQ775_RS18170	COG2226	methyltransferase
FQ775_RS18175	COG1285	pathogenesis
FQ775_RS18180	COG0659	secondary active sulfate transmembrane transporter activity
FQ775_RS18185	COG0589	response to stress
FQ775_RS18200	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FQ775_RS18215	COG3655	Transcriptional regulator
FQ775_RS18225	COG3706	GGDEF domain
FQ775_RS18300	COG3132	Protein of unknown function, DUF480
FQ775_RS18305	COG2226	methyltransferase
FQ775_RS18305	COG0596	Alpha beta hydrolase
FQ775_RS18305	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FQ775_RS18310	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ775_RS18320	COG1764	response to oxidative stress
FQ775_RS18325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ775_RS18330	COG1946	Acyl-CoA thioesterase
FQ775_RS18335	COG0347	Belongs to the P(II) protein family
FQ775_RS18340	COG0004	ammonium transporteR
FQ775_RS18345	COG1674	ftsk spoiiie
FQ775_RS18345	COG2261	transglycosylase associated protein
FQ775_RS18350	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FQ775_RS18365	COG0745	RESPONSE REGULATOR receiver
FQ775_RS18395	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FQ775_RS18400	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FQ775_RS18405	COG0181	hydroxymethylbilane synthase activity
FQ775_RS18430	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FQ775_RS18435	COG3842	ATPase activity
FQ775_RS18440	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS18445	COG1177	transmembrane transport
FQ775_RS18455	COG4638	Rieske (2fe-2S)
FQ775_RS18460	COG0372	Belongs to the citrate synthase family
FQ775_RS18465	COG0372	Belongs to the citrate synthase family
FQ775_RS18470	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ775_RS18480	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ775_RS18500	COG1872	DUF167
FQ775_RS18510	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FQ775_RS18550	COG0288	reversible hydration of carbon dioxide
FQ775_RS18555	COG2814	Major facilitator Superfamily
FQ775_RS18590	COG1994	Peptidase M50
FQ775_RS18630	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FQ775_RS18635	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ775_RS18670	COG0683	leucine binding
FQ775_RS18675	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FQ775_RS18690	COG2207	Transcriptional regulator
FQ775_RS18700	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FQ775_RS18705	COG1605	Chorismate mutase
FQ775_RS18705	COG0287	Prephenate dehydrogenase
FQ775_RS18710	COG0228	four-way junction DNA binding
FQ775_RS18720	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FQ775_RS18735	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FQ775_RS18740	COG3152	Membrane
FQ775_RS18745	COG0473	3-isopropylmalate dehydrogenase activity
FQ775_RS18770	COG0066	3-isopropylmalate dehydratase activity
FQ775_RS18795	COG1051	belongs to the nudix hydrolase family
FQ775_RS18810	COG0587	DNA-directed DNA polymerase activity
FQ775_RS18815	COG2835	tetraacyldisaccharide 4'-kinase activity
FQ775_RS18820	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FQ775_RS18845	COG1268	BioY protein
FQ775_RS18870	COG0357	Ribosomal RNA small subunit methyltransferase G
FQ775_RS18875	COG0445	tRNA wobble uridine modification
FQ775_RS18880	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FQ775_RS18885	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FQ775_RS18895	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FQ775_RS18900	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FQ775_RS18905	COG0424	maF-like protein
FQ775_RS18910	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FQ775_RS18915	COG0237	dephospho-CoA kinase activity
FQ775_RS18920	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FQ775_RS18925	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FQ775_RS18930	COG3030	protein affecting phage T7 exclusion by the F plasmid
FQ775_RS18965	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FQ775_RS18975	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FQ775_RS18980	COG0131	Imidazoleglycerol-phosphate dehydratase
FQ775_RS18990	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FQ775_RS18995	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FQ775_RS19000	COG0107	imidazoleglycerol-phosphate synthase activity
FQ775_RS19005	COG0140	phosphoribosyl-ATP diphosphatase activity
FQ775_RS19010	COG1072	(Pantothenic acid kinase))
FQ775_RS19015	COG1522	sequence-specific DNA binding
FQ775_RS19030	COG1652	LysM domain
FQ775_RS19035	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FQ775_RS19055	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS19065	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FQ775_RS19065	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FQ775_RS19070	COG1280	lysine exporter protein (LysE YggA)
FQ775_RS19075	COG0735	belongs to the Fur family
FQ775_RS19085	COG0546	phosphoglycolate phosphatase activity
FQ775_RS19115	COG2319	Wd-40 repeat
FQ775_RS19140	COG0156	8-amino-7-oxononanoate synthase activity
FQ775_RS19155	COG1228	amidohydrolase
FQ775_RS19160	COG2986	histidine ammonia-lyase
FQ775_RS19170	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FQ775_RS19175	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FQ775_RS19185	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS19190	COG0667	Aldo Keto reductase
FQ775_RS19195	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FQ775_RS19200	COG1082	Xylose isomerase domain protein TIM barrel
FQ775_RS19210	COG0673	inositol 2-dehydrogenase activity
FQ775_RS19215	COG0395	ABC-type sugar transport system, permease component
FQ775_RS19220	COG1175	transmembrane transport
FQ775_RS19230	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FQ775_RS19235	COG2971	BadF BadG BcrA BcrD
FQ775_RS19240	COG2188	Transcriptional regulator
FQ775_RS19245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FQ775_RS19250	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FQ775_RS19260	COG0326	Molecular chaperone. Has ATPase activity
FQ775_RS19265	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FQ775_RS19280	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS19280	COG3347	Dehydrogenase
FQ775_RS19285	COG0725	ABC transporter, periplasmic molybdate-binding protein
FQ775_RS19290	COG4149	molybdate abc transporter
FQ775_RS19295	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FQ775_RS19315	COG0625	glutathione transferase activity
FQ775_RS19325	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FQ775_RS19330	COG1072	(Pantothenic acid kinase))
FQ775_RS19340	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS19345	COG2197	response regulator
FQ775_RS19350	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS19360	COG1137	ATPase activity
FQ775_RS19365	COG1131	(ABC) transporter
FQ775_RS19390	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FQ775_RS19390	COG1648	precorrin-2 dehydrogenase activity
FQ775_RS19400	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FQ775_RS19405	COG0175	sulfate reduction
FQ775_RS19430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ775_RS19435	COG2860	membrane
FQ775_RS19440	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FQ775_RS19465	COG1420	regulation of RNA biosynthetic process
FQ775_RS19470	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FQ775_RS19480	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FQ775_RS19485	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FQ775_RS19490	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FQ775_RS19495	COG0792	nuclease activity
FQ775_RS19525	COG2226	methyltransferase
FQ775_RS19545	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FQ775_RS19555	COG0830	nickel cation binding
FQ775_RS19565	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FQ775_RS19570	COG0625	glutathione transferase activity
FQ775_RS19585	COG0804	urea catabolic process
FQ775_RS19600	COG0832	Belongs to the urease beta subunit family
FQ775_RS19610	COG3813	Protein conserved in bacteria
FQ775_RS19615	COG0831	urea catabolic process
FQ775_RS19620	COG0829	nickel cation binding
FQ775_RS19635	COG0625	glutathione transferase activity
FQ775_RS19655	COG0539	negative regulation of cytoplasmic translation
FQ775_RS19660	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FQ775_RS19675	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS19685	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FQ775_RS19735	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FQ775_RS19810	COG0582	viral genome integration into host DNA
FQ775_RS19820	COG0588	phosphoglycerate mutase activity
FQ775_RS19830	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FQ775_RS19835	COG1132	(ABC) transporter
FQ775_RS19840	COG0837	glucose binding
FQ775_RS19845	COG1803	Methylglyoxal synthase
FQ775_RS19860	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FQ775_RS19870	COG1968	undecaprenyl-diphosphatase activity
FQ775_RS19880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ775_RS19885	COG2423	ornithine cyclodeaminase activity
FQ775_RS19890	COG2267	carboxylic ester hydrolase activity
FQ775_RS19910	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS19950	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FQ775_RS19965	COG0840	transmembrane signaling receptor activity
FQ775_RS19975	COG1653	transport
FQ775_RS19980	COG1175	transmembrane transport
FQ775_RS19990	COG3842	ATPase activity
FQ775_RS20010	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FQ775_RS20015	COG3386	PFAM SMP-30 Gluconolaconase
FQ775_RS20020	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS20025	COG5001	Diguanylate cyclase
FQ775_RS20025	COG3300	MHYT domain
FQ775_RS20030	COG0189	ligase activity
FQ775_RS20075	COG0606	chelatase, subunit chli
FQ775_RS20090	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FQ775_RS20095	COG0745	RESPONSE REGULATOR receiver
FQ775_RS20100	COG2205	protein histidine kinase activity
FQ775_RS20110	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ775_RS20110	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ775_RS20115	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ775_RS20120	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FQ775_RS20125	COG2205	protein histidine kinase activity
FQ775_RS20130	COG3178	'Phosphotransferase
FQ775_RS20135	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FQ775_RS20140	COG2887	Belongs to the helicase family. UvrD subfamily
FQ775_RS20145	COG1074	ATP-dependent DNA helicase activity
FQ775_RS20160	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FQ775_RS20165	COG0159	tryptophan synthase activity
FQ775_RS20170	COG1324	tolerance protein
FQ775_RS20180	COG0133	tryptophan synthase activity
FQ775_RS20185	COG0135	phosphoribosylanthranilate isomerase activity
FQ775_RS20215	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FQ775_RS20220	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FQ775_RS20225	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FQ775_RS20230	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FQ775_RS20240	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ775_RS20240	COG0072	phenylalanine-tRNA ligase activity
FQ775_RS20250	COG0667	Aldo Keto reductase
FQ775_RS20275	COG0443	Heat shock 70 kDa protein
FQ775_RS20285	COG0484	heat shock protein binding
FQ775_RS20290	COG3963	phosphatidate phosphatase activity
FQ775_RS20305	COG0284	orotidine-5'-phosphate decarboxylase activity
FQ775_RS20325	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FQ775_RS20340	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FQ775_RS20345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ775_RS20350	COG1280	lysine exporter protein (LysE YggA)
FQ775_RS20355	COG1957	nucleoside hydrolase
FQ775_RS20370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ775_RS20375	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FQ775_RS20380	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FQ775_RS20385	COG1137	ATPase activity
FQ775_RS20390	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FQ775_RS20400	COG0616	signal peptide processing
FQ775_RS20405	COG0776	regulation of translation
FQ775_RS20415	COG2423	ornithine cyclodeaminase activity
FQ775_RS20420	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FQ775_RS20420	COG0116	Belongs to the methyltransferase superfamily
FQ775_RS20425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FQ775_RS20430	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FQ775_RS20435	COG0604	alcohol dehydrogenase
FQ775_RS20455	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FQ775_RS20480	COG0281	malic enzyme
FQ775_RS20480	COG0280	phosphate acetyltransferase
FQ775_RS20485	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FQ775_RS20495	COG5001	Diguanylate cyclase
FQ775_RS20495	COG5002	protein histidine kinase activity
FQ775_RS20500	COG3300	MHYT domain
FQ775_RS20500	COG5001	Diguanylate cyclase
FQ775_RS20505	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FQ775_RS20520	COG0180	Tryptophanyl-tRNA synthetase
FQ775_RS20530	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FQ775_RS20535	COG1388	LysM domain
FQ775_RS20535	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS20545	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FQ775_RS20555	COG1643	Atp-dependent helicase
FQ775_RS20560	COG4136	ATPase activity
FQ775_RS20565	COG4135	transport system, permease component
FQ775_RS20570	COG4134	Bacterial extracellular solute-binding protein
FQ775_RS20575	COG0697	spore germination
FQ775_RS20580	COG2188	Transcriptional regulator
FQ775_RS20585	COG3624	Phosphonate C-P lyase system protein PhnG
FQ775_RS20590	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FQ775_RS20595	COG3626	phosphonate metabolism
FQ775_RS20605	COG3627	carbon phosphorus lyase activity
FQ775_RS20610	COG4107	phosphonate C-P lyase system protein PhnK
FQ775_RS20615	COG4778	phosphonate C-P lyase system protein PhnL
FQ775_RS20640	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FQ775_RS20650	COG3639	organic phosphonate transmembrane transporter activity
FQ775_RS20655	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FQ775_RS20660	COG3454	Phosphonate metabolism
FQ775_RS20710	COG2733	membrane
FQ775_RS20735	COG2201	protein-glutamate methylesterase activity
FQ775_RS20740	COG0156	8-amino-7-oxononanoate synthase activity
FQ775_RS20745	COG5001	Diguanylate cyclase
FQ775_RS20745	COG3300	MHYT domain
FQ775_RS20755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FQ775_RS20760	COG0165	Argininosuccinate lyase
FQ775_RS20790	COG2202	Pas domain
FQ775_RS20790	COG3920	Histidine kinase
FQ775_RS20800	COG0784	Response regulator, receiver
FQ775_RS20825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ775_RS20835	COG0783	Belongs to the Dps family
FQ775_RS20855	COG0683	leucine binding
FQ775_RS20890	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ775_RS20895	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FQ775_RS20910	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS20915	COG1129	ABC transporter
FQ775_RS20920	COG1879	ABC-type sugar transport system periplasmic component
FQ775_RS20935	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS20940	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS20945	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FQ775_RS20950	COG0402	S-adenosylhomocysteine deaminase activity
FQ775_RS20980	COG2084	Dehydrogenase
FQ775_RS20995	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS21025	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ775_RS21030	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FQ775_RS21045	COG2182	Extracellular solute-binding protein
FQ775_RS21050	COG1175	transmembrane transport
FQ775_RS21055	COG0395	ABC-type sugar transport system, permease component
FQ775_RS21060	COG3842	ATPase activity
FQ775_RS21070	COG4172	Belongs to the ABC transporter superfamily
FQ775_RS21075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS21080	COG0601	transmembrane transport
FQ775_RS21085	COG0747	negative chemotaxis
FQ775_RS21090	COG0583	DNA-binding transcription factor activity
FQ775_RS21100	COG2130	NADP-dependent
FQ775_RS21105	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FQ775_RS21110	COG0277	FAD linked oxidase domain protein
FQ775_RS21115	COG2030	dehydratase
FQ775_RS21125	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS21130	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS21155	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS21165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FQ775_RS21175	COG1024	Enoyl-CoA hydratase
FQ775_RS21180	COG1960	acyl-CoA dehydrogenase activity
FQ775_RS21195	COG2086	electron transfer activity
FQ775_RS21200	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FQ775_RS21215	COG1475	DNA binding
FQ775_RS21280	COG1335	isochorismatase
FQ775_RS21300	COG0145	ligase activity
FQ775_RS21325	COG1028	Short-chain dehydrogenase reductase Sdr
FQ775_RS21335	COG0145	ligase activity
FQ775_RS21375	COG3246	L-lysine catabolic process to acetate
FQ775_RS21380	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FQ775_RS21390	COG0411	ABC transporter
FQ775_RS21405	COG1063	alcohol dehydrogenase
FQ775_RS21440	COG1024	Enoyl-CoA hydratase
FQ775_RS21445	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS21455	COG1475	DNA binding
FQ775_RS21465	COG1177	transmembrane transport
FQ775_RS21475	COG3842	ATPase activity
FQ775_RS21560	COG2900	Belongs to the SlyX family
FQ775_RS21570	COG1454	alcohol dehydrogenase
FQ775_RS21580	COG1335	isochorismatase
FQ775_RS21585	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ775_RS21600	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FQ775_RS21605	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FQ775_RS21610	COG1012	belongs to the aldehyde dehydrogenase family
FQ775_RS21615	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FQ775_RS21625	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FQ775_RS21630	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FQ775_RS21635	COG2226	methyltransferase
FQ775_RS21640	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FQ775_RS21650	COG1487	ribonuclease activity
FQ775_RS21655	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FQ775_RS21675	COG0450	alkyl hydroperoxide reductase
FQ775_RS21705	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FQ775_RS21725	COG0121	glutamine amidotransferase
FQ775_RS21735	COG1522	sequence-specific DNA binding
FQ775_RS21745	COG0625	glutathione transferase activity
FQ775_RS21760	COG0756	dUTP diphosphatase activity
FQ775_RS21775	COG3938	Belongs to the proline racemase family
FQ775_RS21795	COG0659	secondary active sulfate transmembrane transporter activity
FQ775_RS21805	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FQ775_RS21825	COG2814	Major facilitator Superfamily
FQ775_RS21840	COG1131	(ABC) transporter
FQ775_RS21845	COG0842	Transport permease protein
FQ775_RS21900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FQ775_RS21915	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS21925	COG3842	ATPase activity
FQ775_RS21935	COG4176	ABC-type proline glycine betaine transport system permease component
FQ775_RS21945	COG1435	thymidine kinase activity
FQ775_RS21995	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FQ775_RS22015	COG0512	Glutamine amidotransferase of anthranilate synthase
FQ775_RS22015	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FQ775_RS22035	COG3180	Ammonia monooxygenase
FQ775_RS22045	COG0123	including yeast histone deacetylase and acetoin utilization protein
FQ775_RS22050	COG0534	Mate efflux family protein
FQ775_RS22055	COG0167	dihydroorotate dehydrogenase activity
FQ775_RS22085	COG0784	Response regulator, receiver
FQ775_RS22085	COG2198	Histidine kinase
FQ775_RS22085	COG2205	protein histidine kinase activity
FQ775_RS22090	COG1970	mechanosensitive ion channel activity
FQ775_RS22095	COG0436	Aminotransferase
FQ775_RS22100	COG3706	GGDEF domain
FQ775_RS22105	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FQ775_RS22165	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS22180	COG2358	TRAP transporter, solute receptor (TAXI family
FQ775_RS22185	COG2204	response regulator
FQ775_RS22200	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FQ775_RS22210	COG4721	ABC-type cobalt transport system, permease component
FQ775_RS22215	COG1122	ATPase activity
FQ775_RS22220	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FQ775_RS22225	COG1271	oxidase subunit
FQ775_RS22230	COG1294	oxidase, subunit
FQ775_RS22260	COG1595	DNA-templated transcription, initiation
FQ775_RS22320	COG1490	D-aminoacyl-tRNA deacylase activity
FQ775_RS22335	COG2202	Pas domain
FQ775_RS22335	COG3920	Histidine kinase
FQ775_RS22345	COG0666	response to abiotic stimulus
FQ775_RS22360	COG0481	GTPase activity
FQ775_RS22380	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FQ775_RS22400	COG3300	MHYT domain
FQ775_RS22400	COG5001	Diguanylate cyclase
FQ775_RS22405	COG0840	transmembrane signaling receptor activity
FQ775_RS22415	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FQ775_RS22420	COG1702	phosphate starvation-inducible protein PhoH
FQ775_RS22425	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FQ775_RS22430	COG4535	Mg2 and Co2 transporter CorC
FQ775_RS22435	COG1086	Polysaccharide biosynthesis protein
FQ775_RS22440	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FQ775_RS22445	COG1396	sequence-specific DNA binding
FQ775_RS22450	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FQ775_RS22455	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FQ775_RS22470	COG0010	Belongs to the arginase family
FQ775_RS22480	COG0779	Required for maturation of 30S ribosomal subunits
FQ775_RS22495	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FQ775_RS22505	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FQ775_RS22510	COG0598	Magnesium transport protein CorA
FQ775_RS22525	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FQ775_RS22530	COG1185	polyribonucleotide nucleotidyltransferase activity
FQ775_RS22535	COG2813	Specifically methylates the guanine in position
FQ775_RS22540	COG5001	Diguanylate cyclase
FQ775_RS22540	COG3300	MHYT domain
FQ775_RS22545	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FQ775_RS22555	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FQ775_RS22570	COG1335	isochorismatase
FQ775_RS22600	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FQ775_RS22610	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FQ775_RS22620	COG0268	Binds directly to 16S ribosomal RNA
FQ775_RS22625	COG1024	Enoyl-CoA hydratase
FQ775_RS22635	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FQ775_RS22675	COG4964	Belongs to the GSP D family
FQ775_RS22715	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FQ775_RS22735	COG4172	Belongs to the ABC transporter superfamily
FQ775_RS22740	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
FQ775_RS22750	COG4239	(ABC) transporter, permease
FQ775_RS22755	COG4174	ABC transporter (Permease)
FQ775_RS22765	COG4166	transmembrane transport
FQ775_RS22770	COG3474	cytochrome
FQ775_RS22775	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FQ775_RS22795	COG2816	NAD+ diphosphatase activity
FQ775_RS22815	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FQ775_RS22820	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FQ775_RS22825	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FQ775_RS22835	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FQ775_RS22845	COG0242	peptide deformylase activity
FQ775_RS22850	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FQ775_RS22860	COG0101	tRNA pseudouridine synthase activity
FQ775_RS22880	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ775_RS22905	COG2171	N-acyltransferase activity
FQ775_RS22920	COG3706	GGDEF domain
FQ775_RS22930	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FQ775_RS22935	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FQ775_RS22940	COG0110	maltose O-acetyltransferase activity
FQ775_RS22945	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FQ775_RS22950	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ775_RS22955	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FQ775_RS22990	COG0702	epimerase
FQ775_RS23000	COG0706	membrane insertase activity
FQ775_RS23005	COG0594	ribonuclease P activity
FQ775_RS23010	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FQ775_RS23030	COG4191	Histidine kinase
FQ775_RS23045	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FQ775_RS23055	COG0583	DNA-binding transcription factor activity
FQ775_RS23070	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ775_RS23075	COG0045	succinate-CoA ligase (ADP-forming) activity
FQ775_RS23075	COG1042	CoA-binding domain protein
FQ775_RS23075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ775_RS23080	COG1376	ErfK ybiS ycfS ynhG family protein
FQ775_RS23080	COG1388	LysM domain
FQ775_RS23085	COG2885	chlorophyll binding
FQ775_RS23120	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS23125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS23165	COG1396	sequence-specific DNA binding
FQ775_RS23170	COG4166	transmembrane transport
FQ775_RS23180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS23185	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS23190	COG4608	Belongs to the ABC transporter superfamily
FQ775_RS23230	COG1131	(ABC) transporter
FQ775_RS23235	COG0842	Transport permease protein
FQ775_RS23245	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ775_RS23255	COG0840	transmembrane signaling receptor activity
FQ775_RS23265	COG0745	RESPONSE REGULATOR receiver
FQ775_RS23270	COG2198	Histidine kinase
FQ775_RS23270	COG0643	Histidine kinase
FQ775_RS23275	COG0835	chemotaxis
FQ775_RS23280	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FQ775_RS23285	COG2201	protein-glutamate methylesterase activity
FQ775_RS23290	COG0745	RESPONSE REGULATOR receiver
FQ775_RS23295	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FQ775_RS23305	COG0583	DNA-binding transcription factor activity
FQ775_RS23310	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FQ775_RS23315	COG3842	ATPase activity
FQ775_RS23320	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ775_RS23325	COG1177	transmembrane transport
FQ775_RS23345	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FQ775_RS23350	COG3383	formate dehydrogenase (NAD+) activity
FQ775_RS23395	COG0489	protein tyrosine kinase activity
FQ775_RS23400	COG0823	Involved in the tonB-independent uptake of proteins
FQ775_RS23410	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ775_RS23415	COG1024	Enoyl-CoA hydratase
FQ775_RS23425	COG0129	dihydroxy-acid dehydratase activity
FQ775_RS23430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ775_RS23440	COG0546	phosphoglycolate phosphatase activity
FQ775_RS23450	COG1032	radical SAM domain protein
FQ775_RS23465	COG4221	oxidoreductase activity
FQ775_RS23480	COG0747	negative chemotaxis
FQ775_RS23485	COG0601	transmembrane transport
FQ775_RS23490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ775_RS23495	COG0444	Belongs to the ABC transporter superfamily
FQ775_RS23500	COG4608	Belongs to the ABC transporter superfamily
FQ775_RS23505	COG1414	Transcriptional regulator
FQ775_RS23595	COG0318	PFAM AMP-dependent synthetase and ligase
FQ775_RS23610	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ775_RS23620	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ775_RS23625	COG0583	DNA-binding transcription factor activity
FQ775_RS23630	COG2079	MmgE PrpD family protein
FQ775_RS23645	COG1475	DNA binding
FQ775_RS23675	COG1475	DNA binding
FQ775_RS23700	COG0302	gtp cyclohydrolase
FQ775_RS23705	COG1595	DNA-templated transcription, initiation
FQ775_RS23735	COG1959	2 iron, 2 sulfur cluster binding
FQ775_RS23740	COG0288	reversible hydration of carbon dioxide
FQ775_RS23745	COG0583	DNA-binding transcription factor activity
FQ775_RS23750	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FQ775_RS23755	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B